View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21418_low_9 (Length: 237)
Name: NF21418_low_9
Description: NF21418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21418_low_9 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 31 - 219
Target Start/End: Original strand, 41082113 - 41082301
Alignment:
| Q |
31 |
gttgaataaaaaatagtaaatgtgtgaaaatattaatagctgatattcttgtaacaattgtactaaatgagccagacattggttaataggccagctagtt |
130 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41082113 |
gttgaataataaatagtaaatgtgtgaaaatattaatagctgatattcttgtaacaattgtactaaatgagccagacattggttaataggccagctagtt |
41082212 |
T |
|
| Q |
131 |
taagctgtaagaaagaaattgttgaagttgaaatagaattttaaagcaaaaaataaagacactatgctccataaataggtagtagcttg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41082213 |
taagctgtaagaaagaaattgttgaagttgaaatagaattttaaagcaaaaaataaagacactatgctccataaataggtagtagcttg |
41082301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University