View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21423_high_11 (Length: 313)
Name: NF21423_high_11
Description: NF21423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21423_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 88 - 303
Target Start/End: Original strand, 9251237 - 9251452
Alignment:
| Q |
88 |
ttattattagtggagaaattccattgaaatctcgcgagtgccattggtgtacgcctccaatgatggctccaaattgtttcatagcaagcatggtacccta |
187 |
Q |
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| T |
9251237 |
ttattattagtggagaaattccattgaaatctcgcgagtgccattggtgtacgcctccaatgatggctccaaattgtttcctagcaagcatggtacccta |
9251336 |
T |
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| Q |
188 |
tttttgcttgttagcccaaatcaagcattatagcctatttttccacctctattgggataatcgtgcatatgcttccttattggtcctagtttcaattagt |
287 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9251337 |
tttttgcttgttagcccaaatcaagcatggtagcctatttttccacctctaatgggataatcgtgcatatgcttccttattggtcctagtttcaattagt |
9251436 |
T |
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| Q |
288 |
ggccgtttttcctttg |
303 |
Q |
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| T |
9251437 |
ggccgtttttcctttg |
9251452 |
T |
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