View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21423_low_6 (Length: 392)
Name: NF21423_low_6
Description: NF21423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21423_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 31 - 373
Target Start/End: Complemental strand, 14928908 - 14928566
Alignment:
| Q |
31 |
cattgttgctaatgatcttccaagtgtgtcaccacttggtgtttgaactaggtgccagaaattaccatattccaatgaaaatgcagctagtgcaaagatt |
130 |
Q |
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| T |
14928908 |
cattgttgctaatgatcttccaagtgtatcaccacttggtgtttgaactaggtgccagaaatttccatattccaatgaaaatgcagctagtgcaaagatt |
14928809 |
T |
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| Q |
131 |
gcttttccatcccatgtatgggatttcagttgatcaaggattgacattgttgtcatgtgagcatggtgctcaccaggaagtgtgctcatcatctacaaat |
230 |
Q |
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| T |
14928808 |
gcttttccatcccatgtatgggatttcagctgatcaaggattgacattgttgtcatgtgagcatggtgctcaccaggaagtgtgctcatcatctacaaat |
14928709 |
T |
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| Q |
231 |
cacaaaataattagttagaacttagagataaatttcacannnnnnnngtcacaatcttatccttaaatttgtttctgttttcaatttttattgcatatta |
330 |
Q |
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| T |
14928708 |
cacaaaataattagttagaacttagagataaatttcacattttttttgtcacaatcttatccttaaatttgtttctgttttcaattttgattgcatatta |
14928609 |
T |
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| Q |
331 |
atagtgcgctattttacattagagcttcgctctagctttaaat |
373 |
Q |
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|||||| || ||||||||||||||||||||||| ||||||||| |
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| T |
14928608 |
atagtgtgcaattttacattagagcttcgctctggctttaaat |
14928566 |
T |
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