View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21426_high_5 (Length: 218)
Name: NF21426_high_5
Description: NF21426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21426_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 25290871 - 25290712
Alignment:
| Q |
10 |
cacagaccgcaccactagcaaaactgtcaggagcataacgcagccaaaaacagaaaaaacagcagcactgaaagacaacacagcagtcttataataacag |
109 |
Q |
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| T |
25290871 |
cacagaccgcaccactagcaaaactgtcaggagcataacgcagccaaaaacagaaaaaacagcagcactgaaagacaacacaacagtcttataataacag |
25290772 |
T |
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| Q |
110 |
ctccaaaggta-aaaacaccggaaaaactatctaagtaagcactcccgagggttccaact |
168 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25290771 |
ctccaaaggtaaaaaacaccggaaaaactatctaagtaagcactcccgagggttccaact |
25290712 |
T |
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