View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21428_high_14 (Length: 289)
Name: NF21428_high_14
Description: NF21428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21428_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 36640031 - 36639780
Alignment:
| Q |
19 |
gaacaagtaaaaagacagaagaaaagatgaacttagaagccattataaatattggagatacgtagctaggttaatttaatatgcatgttgtgaagaagaa |
118 |
Q |
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| T |
36640031 |
gaacaagtaaaaagacagaagaaaagatgaacttagaagccattataaatattggagatacgtagctaggttaatttaatatgcatgttgtgaagaagaa |
36639932 |
T |
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| Q |
119 |
gacacatatatttataatggtgggataatttaaggatttaataattaaaaattagaaattagaatgatgggtgatgcagccatttgggaagaaattaatg |
218 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
36639931 |
gacacatatatttataatggtgggataattcaaggatttaataattaaaaattagaaattagaatgatgggtgttgcagccatttgggaagaaattaatg |
36639832 |
T |
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| Q |
219 |
attaaagacactaatgaggaagcattatctgtacgttatcactgctacctct |
270 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
36639831 |
attaaagacactaatgaggaagcattatctgtacgttttcactgctacctct |
36639780 |
T |
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