View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21428_low_19 (Length: 243)

Name: NF21428_low_19
Description: NF21428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21428_low_19
NF21428_low_19
[»] chr2 (27 HSPs)
chr2 (3-221)||(33864181-33864398)
chr2 (7-99)||(6999149-6999241)
chr2 (7-97)||(39085862-39085952)
chr2 (7-104)||(23685722-23685819)
chr2 (7-99)||(2966487-2966579)
chr2 (3-73)||(27495096-27495166)
chr2 (7-73)||(41436451-41436517)
chr2 (7-73)||(39401604-39401670)
chr2 (7-72)||(11445389-11445454)
chr2 (10-73)||(16361539-16361602)
chr2 (7-73)||(862562-862628)
chr2 (11-69)||(35445365-35445423)
chr2 (7-96)||(9201565-9201653)
chr2 (3-71)||(44299747-44299815)
chr2 (7-73)||(17056127-17056193)
chr2 (7-73)||(17068574-17068640)
chr2 (7-73)||(17095136-17095202)
chr2 (7-73)||(17074557-17074623)
chr2 (7-68)||(15004905-15004966)
chr2 (10-71)||(33726355-33726416)
chr2 (7-96)||(44173070-44173158)
chr2 (7-71)||(464770-464834)
chr2 (7-99)||(11659209-11659301)
chr2 (19-71)||(17118454-17118506)
chr2 (7-45)||(765220-765258)
chr2 (8-96)||(1321117-1321206)
chr2 (8-66)||(41890182-41890240)
[»] chr6 (15 HSPs)
chr6 (7-121)||(7875251-7875365)
chr6 (7-113)||(7880497-7880603)
chr6 (6-96)||(26572146-26572236)
chr6 (7-73)||(5578247-5578313)
chr6 (7-73)||(32786042-32786108)
chr6 (7-75)||(12191464-12191532)
chr6 (7-98)||(10855381-10855471)
chr6 (7-102)||(16437652-16437747)
chr6 (3-72)||(7274280-7274349)
chr6 (7-77)||(29964270-29964340)
chr6 (7-71)||(8324174-8324238)
chr6 (7-46)||(6866915-6866954)
chr6 (58-104)||(19645939-19645985)
chr6 (7-43)||(28014638-28014674)
chr6 (7-71)||(34780048-34780112)
[»] chr4 (32 HSPs)
chr4 (11-113)||(47188739-47188841)
chr4 (7-70)||(31754914-31754977)
chr4 (7-71)||(19328998-19329062)
chr4 (7-99)||(26040430-26040522)
chr4 (7-103)||(30475368-30475464)
chr4 (7-71)||(34316793-34316857)
chr4 (7-98)||(54339061-54339152)
chr4 (7-72)||(9693541-9693606)
chr4 (7-104)||(45688685-45688782)
chr4 (7-99)||(2362576-2362668)
chr4 (7-71)||(10100183-10100247)
chr4 (7-71)||(35808466-35808530)
chr4 (7-106)||(31168074-31168173)
chr4 (7-72)||(41956283-41956348)
chr4 (7-107)||(50514683-50514783)
chr4 (7-98)||(26831856-26831946)
chr4 (7-70)||(32131118-32131181)
chr4 (7-98)||(53567023-53567114)
chr4 (7-97)||(23765527-23765617)
chr4 (7-73)||(51266897-51266963)
chr4 (7-73)||(55669712-55669778)
chr4 (7-78)||(33951668-33951739)
chr4 (7-103)||(20456512-20456608)
chr4 (7-70)||(20811239-20811302)
chr4 (7-73)||(27839376-27839442)
chr4 (7-71)||(40436056-40436120)
chr4 (7-65)||(1457605-1457663)
chr4 (7-73)||(15986239-15986305)
chr4 (7-66)||(35675260-35675319)
chr4 (7-66)||(52341581-52341640)
chr4 (7-45)||(34016626-34016664)
chr4 (25-73)||(45088043-45088091)
[»] chr5 (21 HSPs)
chr5 (7-99)||(25017361-25017453)
chr5 (7-97)||(39567852-39567942)
chr5 (7-99)||(16315602-16315694)
chr5 (7-98)||(35653325-35653416)
chr5 (7-72)||(39692984-39693049)
chr5 (7-70)||(3639145-3639207)
chr5 (7-98)||(5151437-5151528)
chr5 (7-73)||(13951306-13951372)
chr5 (7-68)||(4838259-4838320)
chr5 (7-70)||(12914151-12914214)
chr5 (7-73)||(4422034-4422100)
chr5 (7-119)||(8410070-8410181)
chr5 (7-99)||(34546725-34546817)
chr5 (7-58)||(43414134-43414185)
chr5 (7-76)||(25568362-25568431)
chr5 (7-60)||(338834-338887)
chr5 (7-73)||(4962586-4962652)
chr5 (7-55)||(10406779-10406827)
chr5 (7-71)||(12068244-12068307)
chr5 (25-73)||(27823235-27823283)
chr5 (3-31)||(39069342-39069370)
[»] chr1 (38 HSPs)
chr1 (7-73)||(6170618-6170684)
chr1 (7-73)||(41147545-41147611)
chr1 (7-111)||(22346304-22346408)
chr1 (7-97)||(47895283-47895373)
chr1 (7-101)||(27209788-27209882)
chr1 (7-68)||(29966800-29966861)
chr1 (7-99)||(49508800-49508892)
chr1 (7-70)||(50154449-50154512)
chr1 (7-68)||(34874545-34874606)
chr1 (7-99)||(4940807-4940899)
chr1 (7-73)||(11385954-11386020)
chr1 (7-73)||(24140746-24140812)
chr1 (7-65)||(33929947-33930005)
chr1 (7-64)||(47655438-47655495)
chr1 (7-99)||(2125774-2125866)
chr1 (7-70)||(932224-932287)
chr1 (7-73)||(52396416-52396482)
chr1 (7-100)||(7190542-7190635)
chr1 (7-68)||(28277549-28277610)
chr1 (7-76)||(31975457-31975526)
chr1 (7-71)||(28850977-28851040)
chr1 (27-102)||(8244041-8244116)
chr1 (7-54)||(42607391-42607438)
chr1 (7-61)||(50295500-50295555)
chr1 (7-65)||(26469649-26469707)
chr1 (7-98)||(43168089-43168180)
chr1 (7-70)||(43433751-43433814)
chr1 (7-66)||(49901906-49901965)
chr1 (25-75)||(45721726-45721776)
chr1 (7-96)||(25177516-25177605)
chr1 (7-65)||(40845228-40845290)
chr1 (7-59)||(44286859-44286911)
chr1 (18-69)||(9055890-9055941)
chr1 (7-73)||(11385877-11385943)
chr1 (11-53)||(30222613-30222655)
chr1 (7-43)||(21631289-21631325)
chr1 (7-39)||(32213956-32213988)
chr1 (7-107)||(44359739-44359839)
[»] chr3 (26 HSPs)
chr3 (7-71)||(37509086-37509150)
chr3 (7-99)||(44570456-44570548)
chr3 (7-71)||(46317461-46317525)
chr3 (7-98)||(32415518-32415608)
chr3 (7-73)||(36730223-36730289)
chr3 (7-99)||(10854806-10854898)
chr3 (7-106)||(31647244-31647343)
chr3 (7-99)||(51817382-51817474)
chr3 (7-98)||(12050986-12051077)
chr3 (7-65)||(4759920-4759978)
chr3 (7-99)||(52570730-52570821)
chr3 (7-70)||(8715571-8715634)
chr3 (7-78)||(8847522-8847593)
chr3 (7-70)||(9067458-9067521)
chr3 (3-70)||(12905348-12905415)
chr3 (9-71)||(20227452-20227514)
chr3 (7-113)||(41345908-41346014)
chr3 (7-71)||(29915645-29915709)
chr3 (7-71)||(29964798-29964862)
chr3 (7-73)||(25102391-25102457)
chr3 (7-62)||(44695741-44695796)
chr3 (31-97)||(13350804-13350870)
chr3 (7-73)||(35306305-35306371)
chr3 (7-65)||(45899614-45899672)
chr3 (58-99)||(635672-635713)
chr3 (7-104)||(34060836-34060933)
[»] scaffold0062 (3 HSPs)
scaffold0062 (7-73)||(16841-16907)
scaffold0062 (7-73)||(27009-27075)
scaffold0062 (7-73)||(37175-37241)
[»] chr8 (22 HSPs)
chr8 (25-98)||(4989884-4989957)
chr8 (7-99)||(3174403-3174499)
chr8 (9-64)||(34713993-34714048)
chr8 (7-65)||(21016127-21016185)
chr8 (7-72)||(10694781-10694846)
chr8 (7-68)||(19389380-19389441)
chr8 (7-72)||(33741544-33741609)
chr8 (7-72)||(6433518-6433583)
chr8 (7-52)||(6939152-6939197)
chr8 (7-99)||(26672737-26672829)
chr8 (7-46)||(25249411-25249450)
chr8 (24-71)||(44874308-44874355)
chr8 (7-73)||(37433239-37433305)
chr8 (3-66)||(14855450-14855513)
chr8 (7-54)||(30351583-30351630)
chr8 (7-74)||(8018732-8018800)
chr8 (7-66)||(5300203-5300262)
chr8 (7-46)||(21016234-21016273)
chr8 (7-54)||(26195443-26195490)
chr8 (3-72)||(38869978-38870047)
chr8 (7-55)||(18068953-18069001)
chr8 (7-67)||(45337983-45338043)
[»] chr7 (29 HSPs)
chr7 (7-98)||(7323023-7323114)
chr7 (7-99)||(8292692-8292784)
chr7 (7-98)||(29687424-29687515)
chr7 (9-71)||(22521561-22521623)
chr7 (7-73)||(42222194-42222260)
chr7 (7-99)||(1910191-1910283)
chr7 (7-71)||(5240402-5240466)
chr7 (7-73)||(8380414-8380480)
chr7 (7-73)||(29034660-29034726)
chr7 (7-68)||(24359778-24359839)
chr7 (7-68)||(27053563-27053624)
chr7 (7-71)||(46478625-46478689)
chr7 (7-70)||(49069531-49069594)
chr7 (7-59)||(40194813-40194865)
chr7 (7-54)||(43567576-43567623)
chr7 (7-54)||(43958153-43958200)
chr7 (7-108)||(3681633-3681733)
chr7 (7-65)||(5348042-5348097)
chr7 (7-71)||(41188856-41188920)
chr7 (7-78)||(16957634-16957704)
chr7 (7-70)||(30388730-30388793)
chr7 (7-56)||(42552541-42552590)
chr7 (7-98)||(8258708-8258799)
chr7 (16-71)||(29959042-29959097)
chr7 (7-54)||(40763241-40763288)
chr7 (7-52)||(42291274-42291319)
chr7 (7-43)||(31626111-31626147)
chr7 (25-73)||(36279095-36279143)
chr7 (7-71)||(48879645-48879709)
[»] scaffold0002 (1 HSPs)
scaffold0002 (7-66)||(392202-392261)
[»] scaffold0809 (1 HSPs)
scaffold0809 (7-59)||(4716-4768)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 33864398 - 33864181
Alignment:
Q  3 aacattttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaa 102  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| || ||| | |||||||||||| ||||||||    
T  33864398 aacattttaaaagtcaaaatattgttgaaaccaatgcaaatatgttacttc-gacttccttaaccattgtcacgaggacaatggttagcaaaaccctaaa 33864300  T
Q  103 aataataataacaataatatgtcatatgcattaactaattaagtaactgggttattaattataggaaaatgatgaaattgtgagtttcaatcatttatta 202  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33864299 aataataacaacaataatctgccatatgcattaactaattaagtaactgggttattaattataggaaaatgatgaaattgtgagtttcaatcatttatta 33864200  T
Q  203 gagtaacaggggagttgca 221  Q
    |||||||||||||||||||    
T  33864199 gagtaacaggggagttgca 33864181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 6999241 - 6999149
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||| | |||||||||||| |||||    
T  6999241 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgccctgaggacaatggttagcaaaaccct 6999149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 39085862 - 39085952
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagacc 97  Q
    |||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||||||||||||  |||| | ||||||||||||||||    
T  39085862 ttttaaaagtcaaaatgttgttgaaatcaatgcaaacatgctgcttttgacttccttaaccattgctctgaggacaatggttagcaagacc 39085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 23685722 - 23685819
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaa 104  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||| ||||||||| |||||||||  ||| |||||||| ||||| ||||||||    
T  23685722 ttttaaaagtcaaaatgttattgaaatcaatgcaaacatgttacttttggcttccttaaacattgccatcggaacaatggttatcaagatcctaaaaa 23685819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 2966579 - 2966487
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||||||  ||||||||||||||||| |||| | |||| |||||||||||||    
T  2966579 ttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttagcttccttaaccattgccctgaggacaatgattagcaagaccct 2966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 27495166 - 27495096
Alignment:
Q  3 aacattttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  27495166 aacattttaaaaatcaaaatgttgttgaaaccaatgcaaacatactacttttgacttccttaaccattgcc 27495096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 41436517 - 41436451
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  41436517 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttcattaaccattgcc 41436451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 39401604 - 39401670
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||    
T  39401604 ttttaaaagtcaaaattttgttgaaaccaatacaaacatgctacttttggcttccttaaccattgcc 39401670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 11445389 - 11445454
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  11445389 ttttaaatgtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttccttaaccattgc 11445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 16361602 - 16361539
Alignment:
Q  10 taaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  16361602 taaaagtcaaaatgttgtcgaaaccaatgcaaacatgttacttttggcttccttaatcattgcc 16361539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 862628 - 862562
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  862628 ttttaagagtcaaaatcttgttgaaaccaatgcaaacatgctacttttggcttccttaatcattgcc 862562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 35445365 - 35445423
Alignment:
Q  11 aaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccat 69  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  35445365 aaaagtcaaaatattgttgaaaccaatacaaacatgctacttttgacttgcttaaccat 35445423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 9201565 - 9201653
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagac 96  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||| |||||| ||||   ||| |||||||||||    
T  9201565 ttttaaaagtcaaaatgttgttgaa-ccaatacaaacatgttacttttgacttctttaactattgccctgagggcaatagttagcaagac 9201653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 44299747 - 44299815
Alignment:
Q  3 aacattttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||||||||||||||||||||||| || |||  || ||||| |||||||||||||||    
T  44299747 aacattttaaaagtcaaaatattgttgaaaccaatgtaagcatactatttttggcttccttaaccattg 44299815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17056127 - 17056193
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || ||||| |||||||||||||||||    
T  17056127 ttttaaaagacaaaatgttgttgaaaccaatgcaaatatgctatttttggcttccttaaccattgcc 17056193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17068574 - 17068640
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || ||||| |||||||||||||||||    
T  17068574 ttttaaaagacaaaatgttgttgaaaccaatgcaaatatgctatttttggcttccttaaccattgcc 17068640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17095136 - 17095202
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||||||||||||| ||| || |||||  ||||||||||||||||    
T  17095136 ttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctatttttgcattccttaaccattgcc 17095202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17074557 - 17074623
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||||||| |||||| |||||||||| |||||||| ||| || ||||| |||||||||||||||||    
T  17074557 ttttaaaagacaaaatgttgttgaaactaatgcaaatatgctatttttggcttccttaaccattgcc 17074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 15004966 - 15004905
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacca 68  Q
    |||||||| | ||||| |||||||||||||| |||||||| ||||||||||||| |||||||    
T  15004966 ttttaaaaattaaaatgttgttgaaaccaatacaaacatgatacttttgacttctttaacca 15004905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 33726416 - 33726355
Alignment:
Q  10 taaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    ||||||| ||||||||||||||| |||| |||||||| || |||||| ||||||||||||||    
T  33726416 taaaagttaaaatattgttgaaatcaatacaaacatgctatttttgatttccttaaccattg 33726355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 44173158 - 44173070
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagac 96  Q
    |||||||| | ||||| |||||||||||||| ||||||| ||| ||||| |||| |||||| ||| | ||||| ||||||||||||||||    
T  44173158 ttttaaaaattaaaatgttgttgaaaccaatacaaacatatta-ttttggcttctttaaccgttgtcctgagagtaatggttagcaagac 44173070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 464834 - 464770
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||| ||||| || |||||| |||| |||||||||||||||| |||||||||| |||||    
T  464834 ttttaaaagttaaaatgttattgaaatcaatacaaacatgttacttttaacttccttaatcattg 464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 11659301 - 11659209
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||| | ||||||||||||||  ||||| ||| ||  | ||||||  |||||||||||||||| | |||||| ||||||||||||||||    
T  11659301 ttttaaaaattaaaatattgttgaattcaatgtaaatatactgcttttggtttccttaaccattgccctaagaatactggttagcaagaccct 11659209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 17118454 - 17118506
Alignment:
Q  19 aaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||| ||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  17118454 aaatgttgttgaaaccaatgcaaatatgttatttttggcttccttaaccattg 17118506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 765220 - 765258
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacat 45  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  765220 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 765258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 1321206 - 1321117
Alignment:
Q  8 tttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaa-ccattgccatgagaataatggttagcaagac 96  Q
    ||||||| ||||||| ||||||||| ||||| ||||||| ||  |||| ||||||||| |||||||| ||||   |||||||||||||||    
T  1321206 tttaaaaatcaaaatgttgttgaaatcaatgtaaacatgctaactttggcttccttaacccattgccctgagggcaatggttagcaagac 1321117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 41890182 - 41890240
Alignment:
Q  8 tttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaac 66  Q
    ||||||||| |||||||||||||| ||||||||||| |  ||||||||  |||||||||    
T  41890182 tttaaaagttaaaatattgttgaatccaatgcaaacctactacttttggtttccttaac 41890240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 7875251 - 7875365
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||  |||   |||||||||||||||| ||| ||||    
T  7875251 ttttaaaagtcaaaatattgttgaaaccaatgcagacatgctacttttggcttccttaatcattgccccgagggcaatggttagcaagaccttaataata 7875350  T
Q  107 ataataacaataata 121  Q
    ||||||| |||||||    
T  7875351 ataataataataata 7875365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 7880497 - 7880603
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    ||||||||||||||||||||||||||| ||| || ||||| |||||||| ||||||||| |||||||  |||  ||||||||||||||||||||| ||||    
T  7880497 ttttaaaagtcaaaatattgttgaaactaatacagacatgctacttttggcttccttaatcattgccccgagggtaatggttagcaagaccctaataata 7880596  T
Q  107 ataataa 113  Q
    |||||||    
T  7880597 ataataa 7880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 26572146 - 26572236
Alignment:
Q  6 attttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagac 96  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||   |||||||||||||||    
T  26572146 attttaaaagttaaaatattgttaaaaccaatgcaaacatgctacttttgacttccttaaccattgccctgagggcaatggttagcaagac 26572236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 5578313 - 5578247
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  5578313 ttttaaaagtcaaaatattgttgaaacaaatgcaaacatgctacttttgacttccttaaccattgcc 5578247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 32786108 - 32786042
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  32786108 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggtttccttaaccattgcc 32786042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 12191532 - 12191464
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccat 75  Q
    |||||||||||||||| ||||||||| |||| |||||||| |||||||| |||||||||||||||||||    
T  12191532 ttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctacttttgccttccttaaccattgccat 12191464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 10855471 - 10855381
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||||||||||| |||||||||||| |||||| ||| ||||||||| ||| |||||||||||| | || | |||||||||||||||||    
T  10855471 ttttaaaagtcaaaatgttgttgaaacca-tgcaaatatgctacttttgatttctttaaccattgccctcaggacaatggttagcaagaccc 10855381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 16437652 - 16437747
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaa 102  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||  |||||||||||||||| | ||   |||||||| ||||| ||||||    
T  16437652 ttttaaaagtaaaaatattgttgaaaccaatgcaaacatgctactgttggtttccttaaccattgccctcagggcaatggttaacaagatcctaaa 16437747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 7274280 - 7274349
Alignment:
Q  3 aacattttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    |||||||||||||| ||||| ||||||||| |||| |||||||||||||||||  |||||||| ||||||    
T  7274280 aacattttaaaagttaaaatgttgttgaaatcaatacaaacatgttacttttggtttccttaatcattgc 7274349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 29964340 - 29964270
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatga 77  Q
    ||||||||||||||| |||||||||  ||||| ||| || ||| |||||  ||||||||||||||||||||    
T  29964340 ttttaaaagtcaaaacattgttgaattcaatgtaaatatattatttttgggttccttaaccattgccatga 29964270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 8324174 - 8324238
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||| | ||||| ||||||||||||||  |||||||||| ||||  |||||||||||||||    
T  8324174 ttttaaaaattaaaatgttgttgaaaccaatataaacatgttatttttaccttccttaaccattg 8324238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 6866954 - 6866915
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatg 46  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  6866954 ttttaaaagtcaaaatgttgttgaaatcaatgcaaacatg 6866915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 19645985 - 19645939
Alignment:
Q  58 ttccttaaccattgccatgagaataatggttagcaagaccctaaaaa 104  Q
    |||||||||||||||| |||| | ||||||||||||||||| |||||    
T  19645985 ttccttaaccattgccctgaggacaatggttagcaagacccaaaaaa 19645939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 28014674 - 28014638
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaac 43  Q
    |||||||||| |||||||||||||| |||||||||||    
T  28014674 ttttaaaagttaaaatattgttgaatccaatgcaaac 28014638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 34780048 - 34780112
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||| |||| |||||||||  ||||| ||| ||  ||||||||| ||||||||||||||    
T  34780048 ttttaaaagttaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccattg 34780112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 47188739 - 47188841
Alignment:
Q  11 aaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaataataa 110  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||    |||||||||||||||||||| ||||||||    
T  47188739 aaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgccctgatggcaatggttagcaagaccctaataataataa 47188838  T
Q  111 taa 113  Q
    |||    
T  47188839 taa 47188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 31754977 - 31754914
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31754977 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttccttaaccatt 31754914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 19328998 - 19329062
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  19328998 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgccttccttaaccattg 19329062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 26040430 - 26040522
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||| |||||||||||| |||  |||| | ||||||||||||||||||    
T  26040430 ttttaaaagtcaaaatattgttgaagccaatgcaaatatgctacttttggcttccttaaccactgctctgaggacaatggttagcaagaccct 26040522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 30475464 - 30475368
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaa 103  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||  ||||   |||||||||||||||| |||||    
T  30475464 ttttaaatgtcaaaatattgttgaaaccaatgcaaacatattacttttggcttccttaactattgctctgagggcaatggttagcaagaccataaaa 30475368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 34316793 - 34316857
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  34316793 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattg 34316857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 54339152 - 54339061
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    ||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||||||  ||||   |||||||||||||||||    
T  54339152 ttttaaaagtcaaaatatttttgaaaccaatgtaaatatgctacttttgacttccttaaccattgctctgagggcaatggttagcaagaccc 54339061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 9693541 - 9693606
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    ||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  9693541 ttttaaaagtcgaaatattgttgaaaccaatgcaaacatgctatttttgacttccttaaccattgc 9693606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 45688782 - 45688685
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaa 104  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||| |||||||||| |||||| |||    |||||||||||||||||| ||||    
T  45688782 ttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttggcttccttaactattgccctgaatgcaatggttagcaagacccttaaaa 45688685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 2362668 - 2362576
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||||| |||    |||||||||| |||||||    
T  2362668 ttttaaaagtcaaaatgttgttaaaaccaatgcaaacatactacttttgacttccttaaccattgccctgaaggcaatggttagcgagaccct 2362576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 10100183 - 10100247
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  10100183 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggctttcttaaccattg 10100247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 35808466 - 35808530
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  35808466 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattg 35808530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 31168173 - 31168074
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    |||| ||||||||||| ||||||||||||||| ||||||  |||||||| |||| ||||||||||||  | ||  |||||||||||||||||||||||||    
T  31168173 tttttaaagtcaaaatgttgttgaaaccaatgtaaacattctacttttggcttctttaaccattgcctcgggagcaatggttagcaagaccctaaaaata 31168074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 41956283 - 41956348
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  41956283 ttttaaaagtcaaaatgttgttgaagccaatgcaaacatgctacttttgccttccttaaccattgc 41956348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 50514683 - 50514783
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||  |||||||||||||| |||  |   ||||||||||||||||| ||| |||    
T  50514683 ttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggtttccttaaccattgacatcggggcaatggttagcaagacccaaaagata 50514782  T
Q  107 a 107  Q
    |    
T  50514783 a 50514783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 26831856 - 26831946
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||| | ||||| |||||||||| |||||||||||| ||||||||||||| ||||| ||||||| |||  ||||||||||||||||||    
T  26831856 ttttaaaaattaaaatgttgttgaaac-aatgcaaacatgctacttttgacttctttaacgattgccacgagggtaatggttagcaagaccc 26831946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 32131181 - 32131118
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| ||||| |||||||||    
T  32131181 ttttaaaagtcaagatgttgttgaaaccaatgcaaacatgttacttttaacttctttaaccatt 32131118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 53567023 - 53567114
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||||| ||||| ||||||||||  ||||||||||| ||||||||||||||||||| |||| |||||| | |||||||| ||| ||||    
T  53567023 ttttaaaagttaaaatgttgttgaaactcatgcaaacatgctacttttgacttccttaactattgtcatgagtaaaatggttaccaaaaccc 53567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 23765617 - 23765527
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagacc 97  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||  |||||||||| |||| | ||||   ||||||||||||||||    
T  23765617 ttttaaaaatcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaacaattgtcctgagggcaatggttagcaagacc 23765527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 51266963 - 51266897
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||| |||||||    
T  51266963 ttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctacttttgacttccttaatcattgcc 51266897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 55669778 - 55669712
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||| ||| ||||||||||||| |||||||| |||||||||||||||||    
T  55669778 ttttaaaagtcaaaatgttgttaaaaacaatgcaaacatgctacttttggcttccttaaccattgcc 55669712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 33951739 - 33951668
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgag 78  Q
    |||||||| | ||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||    
T  33951739 ttttaaaaattaaaatgttgttgaaaccaatacaaacatgttaattttggcttccttaaccattgccctgag 33951668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 20456608 - 20456512
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaa 103  Q
    ||||||| || ||||||||||||||  ||||||||||||| ||||||||| |||||||| ||||||| | |||  | |||||||||| | |||||||    
T  20456608 ttttaaatgttaaaatattgttgaattcaatgcaaacatgctacttttgatttccttaatcattgccctaagagcactggttagcaaaatcctaaaa 20456512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 20811302 - 20811239
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||||||||||| ||||| ||| ||||||||||||| |||||||| |||| |||||||||    
T  20811302 ttttaaaagtcaaaatgttgttaaaatcaatgcaaacatgctacttttggcttctttaaccatt 20811239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 27839376 - 27839442
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| || || ||||||||||||||||| || ||||||| ||||||| |||||||    
T  27839376 ttttaaaagtcaaaatgttattaaaaccaatgcaaacatgctatttttgacctccttaatcattgcc 27839442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 40436120 - 40436056
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||  ||||||||||||||||||||| ||||||||| ||||||||  || |||||||||||    
T  40436120 ttttaaatatcaaaatattgttgaaaccaaagcaaacatgctacttttggttttcttaaccattg 40436056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 1457605 - 1457663
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaa 65  Q
    |||||||||| ||||||||||||||  |||||||||| | |||||||||| ||||||||    
T  1457605 ttttaaaagttaaaatattgttgaattcaatgcaaacttattacttttgatttccttaa 1457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 15986305 - 15986239
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||| ||||||||||||  ||||||||||||  |||||||   ||||||||||||||||    
T  15986305 ttttaaaagtcagaatattgttgaattcaatgcaaacattctacttttagtttccttaaccattgcc 15986239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 35675260 - 35675319
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaac 66  Q
    |||||||||| ||||||||||||||  ||||||||||||  ||||||||| || ||||||    
T  35675260 ttttaaaagttaaaatattgttgaattcaatgcaaacatactacttttgattttcttaac 35675319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 52341640 - 52341581
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaac 66  Q
    |||||||||||||||| |||||||| |||||||||||||  || |||||  |||||||||    
T  52341640 ttttaaaagtcaaaatgttgttgaatccaatgcaaacatactaattttggtttccttaac 52341581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 34016664 - 34016626
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacat 45  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  34016664 ttttaaaagtcaaaatgttgttgaaatcaatgcaaacat 34016626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 45088091 - 45088043
Alignment:
Q  25 tgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||| ||||||||||||  ||||||||  ||||||||||||||||    
T  45088091 tgttgaaatcaatgcaaacatactacttttggtttccttaaccattgcc 45088043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 25017361 - 25017453
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  |||||  ||||||||||||||||||    
T  25017361 ttttaaaagtcaaaatatcgttgaaaccaatacaaacatgctacttttgacttccttaaccattgctttgagagcaatggttagcaagaccct 25017453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 39567942 - 39567852
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagacc 97  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||   ||||||||||||||||    
T  39567942 ttttaaaaatcaaaacattgttgaaaccaatgcaaacatgctacttttgacttccttaatcattgccctgagggcaatggttagcaagacc 39567852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 16315602 - 16315694
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||| ||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||   ||||||||||||||||||    
T  16315602 ttttaatagtcaaaatgttgttgaaaccaatgcaaacacgctacttttggcttccttaaccattgccctgagggcaatggttagcaagaccct 16315694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 35653325 - 35653416
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||| ||| ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||   |||||||||||||||||    
T  35653325 ttttgaaaatcaaaatgttgttgaaaccaatgcaaacatggtacttttggcttccttaaccattgccctgagggcaatggttagcaagaccc 35653416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 39693049 - 39692984
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  39693049 ttttaaaagttaaaatattgttgaaatcaatacaaacatgttacttttgacttccttaaccattgc 39692984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 3639145 - 3639207
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3639145 ttttaaaagtcaaa-tattgttgaaaccaatgcaaacatattacttttgacttccttaaccatt 3639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 5151528 - 5151437
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||| ||||||||||| ||| | |||||  ||||||||| |||||||    
T  5151528 ttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttgccttccttaaccgttgtcctgagagcaatggttagtaagaccc 5151437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 13951306 - 13951372
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  13951306 ttttaaaagtcaaaatgttgttgaaaccaatgcaagcatgctacttttggcttccttaaccattgcc 13951372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 4838320 - 4838259
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacca 68  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  4838320 ttttaaaagtcaaaatattgttgaaactaatgcaaacatgttatttttggcttccttaacca 4838259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 12914214 - 12914151
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  12914214 ttttaaaaatcaaaatattgttgaaaccaatgcaaacatactacttttggcttccttaaccatt 12914151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 4422034 - 4422100
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||| || ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  4422034 ttttacaaatcaaaatgttgttgaagtcaatgcaaacatgttacttttgacttccttaaccattgcc 4422100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 8410181 - 8410070
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    |||||||||||||||| || || |||||||| |||||||| || ||||| ||||||||| ||||||| ||||   |||| ||| |||||||||||||| |    
T  8410181 ttttaaaagtcaaaatgttattaaaaccaatacaaacatgctagttttggcttccttaatcattgccttgagggcaatgattaacaagaccctaaaaa-a 8410083  T
Q  107 ataataacaataa 119  Q
    ||||| |||||||    
T  8410082 ataattacaataa 8410070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 34546817 - 34546725
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||| ||||| |||||||||| |||||||| ||| |||||||| ||||||||||||||||| | ||   ||| ||||||||||||||    
T  34546817 ttttaaaagttaaaatgttgttgaaactaatgcaaaaatgatacttttggcttccttaaccattgcccttagggcaatagttagcaagaccct 34546725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 43414134 - 43414185
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgact 58  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  43414134 ttttaaaaatcaaaatgttgttgaaaccaatgcaaacatgttacttttgact 43414185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 25568362 - 25568431
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatg 76  Q
    |||||||| ||||||| || ||||||||||||||||||||||| ||||   |||||||||||||||||||    
T  25568362 ttttaaaaatcaaaatgttattgaaaccaatgcaaacatgttaattttagtttccttaaccattgccatg 25568431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 338834 - 338887
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttc 60  Q
    |||||||| |||||||||||||||||| |||||||||||| ||||||| |||||    
T  338834 ttttaaaaatcaaaatattgttgaaacaaatgcaaacatgctacttttaacttc 338887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 4962586 - 4962652
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||| ||||||||||| |||||||||| ||| |||||||| |||||||| ||| | |||||||||||    
T  4962586 tttttaaagtcaaaatgttgttgaaactaatacaaacatgctacttttgtctttcctaaccattgcc 4962652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 10406827 - 10406779
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttg 55  Q
    |||| ||| |||||||||||||||| |||||||||| ||||||||||||    
T  10406827 tttttaaattcaaaatattgttgaatccaatgcaaaaatgttacttttg 10406779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 12068244 - 12068307
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||| || |||| |||||| |||||||| || ||||||||| |||||||||||    
T  12068244 ttttaaaagtcaaaatgttattgacaccaatacaaacatgcta-ttttgactttcttaaccattg 12068307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 27823283 - 27823235
Alignment:
Q  25 tgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||| |||| |||||||| || ||||||||||||||| |||||||    
T  27823283 tgttgaaatcaatacaaacatgctaattttgacttccttaatcattgcc 27823235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 39069342 - 39069370
Alignment:
Q  3 aacattttaaaagtcaaaatattgttgaa 31  Q
    |||||||||||||||||||||||||||||    
T  39069342 aacattttaaaagtcaaaatattgttgaa 39069370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 6170618 - 6170684
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6170618 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 6170684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 41147545 - 41147611
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41147545 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttccttaaccattgcc 41147611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 22346304 - 22346408
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | | |    |||||||||||||||||||| | ||    
T  22346304 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgtcctcaaggcaatggttagcaagaccctaatatta 22346403  T
Q  107 ataat 111  Q
    |||||    
T  22346404 ataat 22346408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 47895373 - 47895283
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagacc 97  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||| | |||||||| |||||||    
T  47895373 ttttaaatgtcaaaatattgttgaaactaatgcaaacatgttacttttggcttccttaaccattgctctgaggacaatggttaacaagacc 47895283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 27209788 - 27209882
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaa 101  Q
    |||||||||| ||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||| | ||   ||||||||||||||||||||    
T  27209788 ttttaaaagttaaaatgttgttgaaaccaatgcaaacatcctacttttggcttccttaaccattgccctcagggcaatggttagcaagaccctaa 27209882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 29966861 - 29966800
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacca 68  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29966861 tttttaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttccttaacca 29966800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 49508800 - 49508892
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||| | ||||   ||| ||||||||||||||    
T  49508800 ttttaaaagtcaaaatattgtcgaaaccaatgcaaacatgctacttttggcttctttaaccattgtcttgagggcaatagttagcaagaccct 49508892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 50154512 - 50154449
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  50154512 ttttaaaagttaaaatgttgttgaaaccaatgcaaacatgttacttttggcttccttaaccatt 50154449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 34874606 - 34874545
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacca 68  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  34874606 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaacca 34874545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 4940807 - 4940899
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||||||||| |||||||| |||||||| || |||||  ||||||||| |||||| |||| | | ||||||||||||||||    
T  4940807 ttttaaaagtcaaaatattgttaaaaccaatacaaacatgctatttttggtttccttaactattgccctgaggacagtggttagcaagaccct 4940899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 11386020 - 11385954
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||  || |||||||||||||    
T  11386020 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggttttcttaaccattgcc 11385954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 24140812 - 24140746
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||| ||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  24140812 tttttaaagtcaaaatgttgttgaaaccaatgcaaacatgctatttttggcttccttaaccattgcc 24140746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 33930005 - 33929947
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaa 65  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  33930005 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaa 33929947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 47655438 - 47655495
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttcctta 64  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  47655438 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgccttcctta 47655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 2125774 - 2125866
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||| ||| |||||| ||| ||| |||||||||||||||||| |||||||||| |||||  | |||| ||| |||||||||    
T  2125774 ttttaaaagtcaaaatgttgatgaaacaaatacaaccatgttacttttgacttctttaaccattgtcatgaagacaatgattaccaagaccct 2125866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 932224 - 932287
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||  ||||||||||||||    
T  932224 ttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttaccttccttaaccatt 932287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 52396482 - 52396416
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||||||||||||||||| ||||||| |||||||||||| || |||| | ||||||||||||||||    
T  52396482 ttttaaaagtcaaaatattattgaaacaaatgcaaacatgctatttttaatttccttaaccattgcc 52396416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 7190542 - 7190635
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagacccta 100  Q
    |||||||||| |||||  ||||||||| |||||||||||| |||||||  ||||||||||||||| | | ||   |||||||||||||||||||    
T  7190542 ttttaaaagttaaaatggtgttgaaactaatgcaaacatgctacttttagcttccttaaccattgtcctaagggcaatggttagcaagacccta 7190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 28277549 - 28277610
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacca 68  Q
    |||||||| | ||||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  28277549 ttttaaaaattaaaatgttgttgaaaacaatgcaaacatgttacttttgatttccttaacca 28277610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 31975526 - 31975457
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatg 76  Q
    |||||||| ||||||||||||| |||| ||||||||||||||| ||||  ||| ||||||||||||||||    
T  31975526 ttttaaaaatcaaaatattgttaaaactaatgcaaacatgttatttttagctttcttaaccattgccatg 31975457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 28850977 - 28851040
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||||| |||||| ||||    
T  28850977 ttttaaaagtcaaaa-attgttgaaaccaatgcaaatatgctacttttgactttcttaacaattg 28851040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 8244116 - 8244041
Alignment:
Q  27 ttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaa 102  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||||| || |   ||||||| |||||||||||||    
T  8244116 ttgaaaccaatggaaacatgttatttttggcttccttaaccattgccctgggtgcaatggtttgcaagaccctaaa 8244041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 42607391 - 42607438
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttactttt 54  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  42607391 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactttt 42607438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 50295500 - 50295555
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgc-aaacatgttacttttgacttcc 61  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  50295500 ttttaaaagtcaaaatattgttgaaatcaatgcaaaacatgctacttttgacttcc 50295555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 26469649 - 26469707
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaa 65  Q
    ||||||||||||||||||| |||||||||||| ||||||  ||||||| ||||||||||    
T  26469649 ttttaaaagtcaaaatattattgaaaccaatgaaaacatactacttttaacttccttaa 26469707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 43168180 - 43168089
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    ||||||||||||||| |||||||||  ||||| ||| ||  ||||||||| ||||||||||||| || ||||   | |||||||||||||||    
T  43168180 ttttaaaagtcaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccatttccctgagggcactggttagcaagaccc 43168089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 43433814 - 43433751
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||| | ||||| |||||||||||||| |||||||  |||||||| ||||||||||||||    
T  43433814 ttttaaaaattaaaatgttgttgaaaccaatacaaacatactacttttggcttccttaaccatt 43433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 49901965 - 49901906
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaac 66  Q
    ||||||| || ||||  ||||||||||||||||||||||| |||||||| ||||||||||    
T  49901965 ttttaaacgttaaaacgttgttgaaaccaatgcaaacatgatacttttggcttccttaac 49901906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 45721776 - 45721726
Alignment:
Q  25 tgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccat 75  Q
    |||| ||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  45721776 tgttaaaatcaatgcaaacatgctacttttgatttccttaaccattgccat 45721726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 25177516 - 25177605
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagac 96  Q
    ||||||||||||||| || ||||||  ||||| ||| ||  ||||||||  ||| |||||||||| | |||||||| |||||||||||||    
T  25177516 ttttaaaagtcaaaacatcgttgaattcaatgtaaatatactacttttggtttctttaaccattgtcgtgagaatattggttagcaagac 25177605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 40845290 - 40845228
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatg----caaacatgttacttttgacttccttaa 65  Q
    |||||||| ||||||||||||||||||||| |    |||||||| ||||||||||||||||||    
T  40845290 ttttaaaaatcaaaatattgttgaaaccaaagcaaacaaacatgctacttttgacttccttaa 40845228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 44286911 - 44286859
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgactt 59  Q
    |||||||| | |||||||| || ||||||||||||||||||||||||| ||||    
T  44286911 ttttaaaaattaaaatattattaaaaccaatgcaaacatgttacttttaactt 44286859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 9055890 - 9055941
Alignment:
Q  18 aaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccat 69  Q
    |||||| |||||| || |||||||||||| |||||||| |||||||||||||    
T  9055890 aaaataatgttgagactaatgcaaacatgctacttttggcttccttaaccat 9055941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 11385877 - 11385943
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||||||||| |   ||| ||||| || | |||||||||||||||    
T  11385877 ttttaaaagtcaaaatgttgttgaaaccaatgtaggaatgctacttatggcatccttaaccattgcc 11385943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 30222655 - 30222613
Alignment:
Q  11 aaaagtcaaaatattgttgaaaccaatgcaaacatgttacttt 53  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||    
T  30222655 aaaagttaaaatattgttgaaaccaatgcaaatatgctacttt 30222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 21631289 - 21631325
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaac 43  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  21631289 ttttaaaagtcaagatattgttgaatccaatgcaaac 21631325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 32213956 - 32213988
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgc 39  Q
    |||||||||||||||| ||||||||||||||||    
T  32213956 ttttaaaagtcaaaatgttgttgaaaccaatgc 32213988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 44359739 - 44359839
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    ||||||||||||||| |||||||||  ||||| ||| ||  || |||||  |||||||||||||||| ||||   | | |||||||||||||  ||||||    
T  44359739 ttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgccctgagggcactagttagcaagacccataaaata 44359838  T
Q  107 a 107  Q
    |    
T  44359839 a 44359839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 37509150 - 37509086
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37509150 ttttaaaagtcaaaatattgttgaaaccaatgcaaatatgttacttttgacttccttaaccattg 37509086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 44570456 - 44570548
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||  |||   ||||||||||||||||||    
T  44570456 ttttaaaagtcaaaatgttgttgaaatcaatgcaaacatgctacttttggcttccttaaccattgcccagagggcaatggttagcaagaccct 44570548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 46317525 - 46317461
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  46317525 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggcttccttaaccattg 46317461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 32415608 - 32415518
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||   ||| |||||||||||||    
T  32415608 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttccttaaccattgcc-tgagggcaatagttagcaagaccc 32415518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 36730223 - 36730289
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  36730223 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 36730289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 10854898 - 10854806
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||| || |||   ||||||||||||||||||    
T  10854898 ttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaatcattgtcacgagggcaatggttagcaagaccct 10854806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 31647343 - 31647244
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc-taaaaat 105  Q
    |||||||||||||||| || |||||| ||||||||||||| |||||||| ||||||||||||||||  |||| | ||||||||||||||||| |||||||    
T  31647343 ttttaaaagtcaaaatgttattgaaatcaatgcaaacatgctacttttggcttccttaaccattgctctgag-acaatggttagcaagacccataaaaat 31647245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 51817382 - 51817474
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||| | ||  ||||||||| ||| |||||    
T  51817382 ttttaaaagtcaaaatattgttgaaactaatacaaacatgctacttttggcttccttaaccattgccctcagggtaatggttaacaaaaccct 51817474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 12051077 - 12050986
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||| | ||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||  |||| |||||||||||||    
T  12051077 ttttaaaaattaaaatgttgttgaaaacaatgcaaacatgctacttttggcttccttaaccattgccctgagggtaatagttagcaagaccc 12050986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 4759920 - 4759978
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaa 65  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  4759920 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggcttccttaa 4759978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 52570821 - 52570730
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaac--atgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||| | |||||||||||||   |||||  ||||||||||||||||||    
T  52570821 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatatgctacttttggcatccttaaccattg---tgagagcaatggttagcaagaccct 52570730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 8715571 - 8715634
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||    
T  8715571 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaaccatt 8715634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 8847522 - 8847593
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgag 78  Q
    |||||||||| ||||||||||||||| ||||| ||||||| ||||||||  |||||||||||||||||||||    
T  8847522 ttttaaaagttaaaatattgttgaaaacaatgtaaacatgctacttttggtttccttaaccattgccatgag 8847593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 9067458 - 9067521
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||    
T  9067458 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaaccatt 9067521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 12905348 - 12905415
Alignment:
Q  3 aacattttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||| ||||    
T  12905348 aacattttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactttttgcttccttaatcatt 12905415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 20227452 - 20227514
Alignment:
Q  9 ttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||| |||||    
T  20227452 ttaaaagttaaaatgttattgaaaccaatacaaacatgttacttttgacttccttaatcattg 20227514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 41346014 - 41345908
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    |||||||||| |||||||||||||||||||||||||||   || ||||| ||| |||||||||| |  | |  ||||||||||||||||||||  |||||    
T  41346014 ttttaaaagttaaaatattgttgaaaccaatgcaaacaatatatttttgcctttcttaaccattactcttatgataatggttagcaagacccttcaaata 41345915  T
Q  107 ataataa 113  Q
    || ||||    
T  41345914 attataa 41345908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 29915645 - 29915709
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||| | ||||||||||||||||||||  |||||||| ||||||||| |||||    
T  29915645 ttttaaaagtcaaaatgtggttgaaaccaatgcaaacattctacttttggcttccttaatcattg 29915709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 29964798 - 29964862
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||| | ||||||||||||||||||||  |||||||| ||||||||| |||||    
T  29964798 ttttaaaagtcaaaatgtggttgaaaccaatgcaaacattctacttttggcttccttaatcattg 29964862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 25102391 - 25102457
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||| ||||| ||||||||||||||||||||||||| ||| ||||||||  ||||||||| ||||||    
T  25102391 tttttaaagttaaaatattgttgaaaccaatgcaaatatgctacttttggtttccttaactattgcc 25102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 44695741 - 44695796
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttcct 62  Q
    |||||||| | ||||| ||||||||| |||||||||||||||||||||| ||||||    
T  44695741 ttttaaaaattaaaatgttgttgaaatcaatgcaaacatgttacttttggcttcct 44695796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 13350870 - 13350804
Alignment:
Q  31 aaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagacc 97  Q
    |||||||||||||||| ||||||||||||| ||||| |||||  ||| | ||||| |||||||||||    
T  13350870 aaccaatgcaaacatgctacttttgacttctttaactattgctctgaaagtaatgattagcaagacc 13350804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 35306371 - 35306305
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||| ||||| || |||||| ||||||||||||| ||||||||  |||||||| |||||||    
T  35306371 ttttaaaagttaaaatgttattgaaatcaatgcaaacatgctacttttggtttccttaagcattgcc 35306305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 45899614 - 45899672
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaa 65  Q
    |||||||||||||||||||||||||  ||||| ||||||  ||||||||  ||||||||    
T  45899614 ttttaaaagtcaaaatattgttgaattcaatgtaaacatactacttttggtttccttaa 45899672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 635713 - 635672
Alignment:
Q  58 ttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||| |||||||  ||||||||||||||||||    
T  635713 ttccttaaccattgtcatgagagcaatggttagcaagaccct 635672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 34060836 - 34060933
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaa 104  Q
    |||||||||| ||||||||||||||  |||||||||||   ||||||| | ||||||||| | |||||| || | | ||||||| || ||||| ||||    
T  34060836 ttttaaaagttaaaatattgttgaattcaatgcaaacaaactacttttaatttccttaacaagtgccattaggacattggttagaaaaacccttaaaa 34060933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 16841 - 16907
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  16841 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 16907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 27009 - 27075
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  27009 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 27075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 37175 - 37241
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  37175 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 37241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 4989957 - 4989884
Alignment:
Q  25 tgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||    
T  4989957 tgttgaaaccaatgcaaacatgctacttttgacttccttaaccattgccatgagggcaatggttagcaagaccc 4989884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 3174499 - 3174403
Alignment:
Q  7 ttttaaaagtcaaaata----ttgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||||    |||||||||||||| |||||||| |||||||| ||||||||||  ||||||||||   ||||||||||||||||||    
T  3174499 ttttaaaagtcaaaataaatgttgttgaaaccaatacaaacatgctacttttggcttccttaactgttgccatgagggcaatggttagcaagaccct 3174403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 34713993 - 34714048
Alignment:
Q  9 ttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttcctta 64  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  34713993 ttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttcctta 34714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 21016127 - 21016185
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaa 65  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  21016127 ttttaaaagtcaaaatgttgttgaagccaatgcaaacatgctacttttgacttccttaa 21016185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 10694846 - 10694781
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    |||||||||||||||| ||||||||| ||||||||| ||| |||||||| ||||||||||||||||    
T  10694846 ttttaaaagtcaaaatgttgttgaaatcaatgcaaatatgatacttttggcttccttaaccattgc 10694781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 19389380 - 19389441
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacca 68  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||    
T  19389380 ttttaaaagtcaaaatatcgttgaaaacaatgcaaacatgctacttttgatttccttaacca 19389441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 33741544 - 33741609
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||  ||||| ||||||    
T  33741544 ttttaaaagttaaaatattgttgaaaccaatgcaaatatgttacttttgactctcttaatcattgc 33741609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 6433583 - 6433518
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    |||||||||| ||||||||||| ||||||||||||| ||  |||||||| ||||||||||||||||    
T  6433583 ttttaaaagttaaaatattgttaaaaccaatgcaaagatactacttttgtcttccttaaccattgc 6433518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 6939197 - 6939152
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttactt 52  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  6939197 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttactt 6939152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 26672829 - 26672737
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||| ||||||||||||||  ||||||  || |||||| |||||||||||||||| | ||   |||| |||||||||||||    
T  26672829 ttttaaaagtcaaaatgttgttgaaaccaatataaacatcgtatttttgatttccttaaccattgccctcagggcaatgattagcaagaccct 26672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 25249411 - 25249450
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatg 46  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25249411 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatg 25249450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 44874355 - 44874308
Alignment:
Q  24 ttgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  44874355 ttgttgaaaccaatgcaaacatgctacttttgtcttccttaaccattg 44874308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 37433305 - 37433239
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||| ||||| ||||| ||||||||||||||||||||||  ||||||| |||||||||| |||||||    
T  37433305 tttttaaagttaaaatgttgttgaaaccaatgcaaacatactacttttaacttccttaatcattgcc 37433239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 14855450 - 14855513
Alignment:
Q  3 aacattttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaac 66  Q
    |||||||||||||| ||||| ||||| |||| |||||||||||| ||||||||  |||||||||    
T  14855450 aacattttaaaagttaaaatgttgttaaaactaatgcaaacatgctacttttggtttccttaac 14855513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 30351630 - 30351583
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttactttt 54  Q
    |||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  30351630 ttttaaaagttaaaatattgttgaatccaatgcaaacatattactttt 30351583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 8018800 - 8018732
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaa-catgttacttttgacttccttaaccattgcca 74  Q
    |||||||| ||||||| ||||| |||| |||||||| |||  |||||||| ||||||||||||||||||    
T  8018800 ttttaaaaatcaaaatgttgttaaaactaatgcaaaacatactacttttggcttccttaaccattgcca 8018732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 5300262 - 5300203
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaac 66  Q
    |||||||||||||||||||||||||  |||||||||| |  ||||||||  |||||||||    
T  5300262 ttttaaaagtcaaaatattgttgaattcaatgcaaacttactacttttggtttccttaac 5300203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 21016273 - 21016234
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatg 46  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  21016273 ttttaaaagtcaaaatgttgttgaagccaatgcaaacatg 21016234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 26195443 - 26195490
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttactttt 54  Q
    |||||||||| ||||| |||||||||||||| |||||||| |||||||    
T  26195443 ttttaaaagttaaaatgttgttgaaaccaatacaaacatgctactttt 26195490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 38870047 - 38869978
Alignment:
Q  3 aacattttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgc 72  Q
    |||||||||||||||||||||||| ||||  ||||| ||| ||  ||||||||  |||||| ||||||||    
T  38870047 aacattttaaaagtcaaaatattgatgaattcaatgtaaatatactacttttggtttccttgaccattgc 38869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 18069001 - 18068953
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttg 55  Q
    ||||||| |||||||| |||||||||| |||||||||||  ||||||||    
T  18069001 ttttaaaggtcaaaatgttgttgaaactaatgcaaacattatacttttg 18068953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 45338043 - 45337983
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacc 67  Q
    |||||||| ||||||| || |||| ||||||||||||||  ||||||||  ||||||||||    
T  45338043 ttttaaaaatcaaaatgttattgagaccaatgcaaacatactacttttggtttccttaacc 45337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 7323023 - 7323114
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||  | || | |||| ||||||||||||    
T  7323023 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttctttaaccattgctctcaggacaatgattagcaagaccc 7323114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 8292784 - 8292692
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||||||||||| | |  | |||||||||||| |||||    
T  8292784 ttttaaaagtcaaaatgttgttgaaatcaatccaaacatgctacttttgacttccttaaccattgccctcacgacaatggttagcaaaaccct 8292692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 29687515 - 29687424
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||  |||||| ||||   |||||||||||||||||    
T  29687515 ttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaagtattgccttgagggcaatggttagcaagaccc 29687424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 22521623 - 22521561
Alignment:
Q  9 ttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  22521623 ttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgactttcttaaccattg 22521561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 42222260 - 42222194
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  42222260 ttttaaaagtcaaaatattgttgaaaccaatacaaacatgttacttttagtttccttaaccattgcc 42222194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 1910283 - 1910191
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccct 99  Q
    |||||||||| ||||| |||||||||| |||| ||||||| ||||||||||||| |||||||||||| |||    ||||||||||||||||||    
T  1910283 ttttaaaagttaaaatgttgttgaaacaaatgtaaacatgctacttttgacttctttaaccattgccctgatggcaatggttagcaagaccct 1910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 5240402 - 5240466
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||    
T  5240402 ttttaaaagtcaaaatgttattgaaaccaatgcaaacatgctacttttggcttccttaaccattg 5240466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 8380480 - 8380414
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| ||||||||||||||| ||||||  |||||||| |||||||||||||||||    
T  8380480 ttttaaaagtcaaaatgttgttgaaaccaatgaaaacatactacttttggcttccttaaccattgcc 8380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 29034726 - 29034660
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||| ||| |||||||||||||    
T  29034726 ttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttggctttcttaaccattgcc 29034660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 24359778 - 24359839
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacca 68  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  24359778 ttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaacca 24359839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 27053563 - 27053624
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaacca 68  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||    
T  27053563 ttttaaaagtcaaaatattgttgaaaccaatgcaaacattctacttttggtttccttaacca 27053624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 46478625 - 46478689
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||||| |||| ||||||||||    
T  46478625 ttttaaaagttaaaatattgttgaaactaatgcaaatatgttacttttggcttcgttaaccattg 46478689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 49069594 - 49069531
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  49069594 ttttaaaaatcaatatattgttgaaaccaatacaaacatgttacttttggtttccttaaccatt 49069531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 40194865 - 40194813
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgactt 59  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  40194865 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttaactt 40194813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 43567576 - 43567623
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttactttt 54  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  43567576 ttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgatactttt 43567623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 43958153 - 43958200
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttactttt 54  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  43958153 ttttaaaagtcaaaatattactgaaaccaatgcaaacatgttactttt 43958200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 3681733 - 3681633
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccctaaaaata 106  Q
    |||||||||| ||||| |||||||||||||||| ||||||| ||  |||||||| |||||||||| |   ||   ||||||||||||||||| |||||||    
T  3681733 ttttaaaagttaaaatgttgttgaaaccaatgc-aacatgtcacggttgacttctttaaccattggccaaagggcaatggttagcaagacccaaaaaata 3681635  T
Q  107 at 108  Q
    ||    
T  3681634 at 3681633  T

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Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 5348042 - 5348097
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaa 65  Q
    ||||||||||||||||   ||||||||||||||||||||| |||||||| |||||||||    
T  5348042 ttttaaaagtcaaaat---gttgaaaccaatgcaaacatgctacttttggcttccttaa 5348097  T

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Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 41188856 - 41188920
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    ||||||||||||||||  |||||||| ||||||||||||  ||| |||| |||||||||||||||    
T  41188856 ttttaaaagtcaaaatgctgttgaaatcaatgcaaacatactacatttggcttccttaaccattg 41188920  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 16957704 - 16957634
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgag 78  Q
    |||||||||||||||||||||||||   |||| ||| || |||||||||  |||||||||||||||||||||    
T  16957704 ttttaaaagtcaaaatattgttgaatttaatgtaaatatattacttttg-gttccttaaccattgccatgag 16957634  T

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Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 30388730 - 30388793
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccatt 70  Q
    ||||||||||||||||||| |||||| ||||  ||||||  ||||||||||||| |||||||||    
T  30388730 ttttaaaagtcaaaatattattgaaatcaatataaacatactacttttgacttctttaaccatt 30388793  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 42552541 - 42552590
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttga 56  Q
    |||||||||||||||||||||| ||  |||||||||||| ||||||||||    
T  42552541 ttttaaaagtcaaaatattgttaaattcaatgcaaacatattacttttga 42552590  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 8258708 - 8258799
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgccatgagaataatggttagcaagaccc 98  Q
    |||||| ||||| ||| ||||||||||||||||||||||  |||||||| ||||  ||| ||||||  | ||   |||||||||||||||||    
T  8258708 ttttaatagtcataattttgttgaaaccaatgcaaacatactacttttgccttcaataatcattgcactaagggcaatggttagcaagaccc 8258799  T

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Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 29959097 - 29959042
Alignment:
Q  16 tcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    ||||||| ||||||||||||||||||||||  ||||||||  |||||||| |||||    
T  29959097 tcaaaatgttgttgaaaccaatgcaaacataatacttttggtttccttaatcattg 29959042  T

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Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 40763288 - 40763241
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttactttt 54  Q
    |||||||||| ||||| ||||||||||||||||||| ||| |||||||    
T  40763288 ttttaaaagttaaaatgttgttgaaaccaatgcaaatatgctactttt 40763241  T

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Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 42291319 - 42291274
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttactt 52  Q
    |||||||||| |||||||||||||| |||||||||| || ||||||    
T  42291319 ttttaaaagttaaaatattgttgaatccaatgcaaatatattactt 42291274  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 31626111 - 31626147
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaac 43  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  31626111 ttttaaaaatcaaaatgttgttgaaaccaatgcaaac 31626147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 36279143 - 36279095
Alignment:
Q  25 tgttgaaaccaatgcaaacatgttacttttgacttccttaaccattgcc 73  Q
    ||||||||  |||||||||||| |||||||| ||| |||||||||||||    
T  36279143 tgttgaaattaatgcaaacatgctacttttgcctttcttaaccattgcc 36279095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 48879709 - 48879645
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaaccattg 71  Q
    |||||||||| ||||||||||||||   |||| ||| ||| ||||||||| || |||||||||||    
T  48879709 ttttaaaagttaaaatattgttgaatttaatgtaaatatgctacttttgattttcttaaccattg 48879645  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 392202 - 392261
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgacttccttaac 66  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||||  ||||||||||    
T  392202 ttttaaaagtcaaaatgttgttgaaaccgatgcaaacatgctacttttcgcttccttaac 392261  T

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Target: scaffold0809 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 4716 - 4768
Alignment:
Q  7 ttttaaaagtcaaaatattgttgaaaccaatgcaaacatgttacttttgactt 59  Q
    ||||||||||||| || |||||||||  |||||||||||| ||||||||||||    
T  4716 ttttaaaagtcaatatgttgttgaaattaatgcaaacatgctacttttgactt 4768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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