View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2142_low_19 (Length: 242)
Name: NF2142_low_19
Description: NF2142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2142_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 7286399 - 7286175
Alignment:
| Q |
1 |
ttttatgtattagtgtatatgttactctttatatattaatatttaaataacaggataaatttaattacaactttgattgagattaattgttttcttagtt |
100 |
Q |
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| T |
7286399 |
ttttatgtattagtgtatatgttactctttatatattaatatttaaataacaggataaatttaattacaactttgattgagattaattgttttcttattt |
7286300 |
T |
|
| Q |
101 |
aaactagaaaattgttgagcatcatggttagtaggagaatgcccaatatagaatatgtttcagatttgaatcaagtcaataagtttgttgacaatataaa |
200 |
Q |
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| T |
7286299 |
agactagaaaattgttgagtatcatggttagtaggagaatgcccaatatagaatatgtttcagatttgaatcaagtcaataagtttgttaataatataaa |
7286200 |
T |
|
| Q |
201 |
aaattaattatcatattacgtttat |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
7286199 |
aaattaattatcatattacgtttat |
7286175 |
T |
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