View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21430_high_27 (Length: 287)
Name: NF21430_high_27
Description: NF21430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21430_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 41222224 - 41222445
Alignment:
| Q |
1 |
ctaatgatcttgattaccttaatgttcttgttaaagttcctctgtgttctcttagctctgtacttggaaannnnnnnnnnnnnnnnnnncgcactataac |
100 |
Q |
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|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
41222224 |
ctaatgatcttgattaccttaatggtcttgttgaagttcctctgtgttctcttagctctgtacttggaaattttttcttttctttcttccgcactataac |
41222323 |
T |
|
| Q |
101 |
gacctactttgaaattttgttcctcttgcaaattcccctctgttggagacatattattttctttcatgttctgtttcaaagactaaacaaacttcaataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41222324 |
gacctactttgaaattttgttcctcttgcaaattcccctctgttggagacatattattttctttcatgttctgtttcaaagactaaacaaacttcaataa |
41222423 |
T |
|
| Q |
201 |
aatcaactttggaaaaatgaag |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
41222424 |
aatcaactttggaaaaatgaag |
41222445 |
T |
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