View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21430_low_35 (Length: 231)
Name: NF21430_low_35
Description: NF21430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21430_low_35 |
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Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 55 - 214
Target Start/End: Original strand, 23802246 - 23802405
Alignment:
| Q |
55 |
caagaaagtttaggaatgtggttagattgaatagttgaatgaaatttattaaggaagcaaatgatccaattcattggcctgcagctagcatatgcaagtg |
154 |
Q |
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| T |
23802246 |
caagaaagtttaggaatgtggttagattgaatagttgaatgaaatttattaaggaagcaaatgatccaattcattggcctgcagctagcatatgcaggtg |
23802345 |
T |
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| Q |
155 |
ttgaagtcctgaagtttattaaatttgaacaatagcagtagttaaatgacatttatgact |
214 |
Q |
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| T |
23802346 |
ttgaagtcctgaagtttattaaatttgaacaatagcagtagttaaatgacatttatgact |
23802405 |
T |
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