View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21432_low_3 (Length: 319)
Name: NF21432_low_3
Description: NF21432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21432_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 24 - 301
Target Start/End: Original strand, 1116724 - 1117001
Alignment:
| Q |
24 |
acctacacactccaacaattctgcgcctcacaaccattcatctctcacttttcagcaagcaattcaacgccttcaggtcttaaacattcaacaatcccac |
123 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1116724 |
acctacacactccaacaattctgcgcctcacaaccattcatctctcacttttcagcaagcaattcaacgccttcaggtcttaaacattcaacaatcccac |
1116823 |
T |
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| Q |
124 |
ttcaccannnnnnnaaaacaattttctgtaaattttgtgttttctgaagtctgtgagcactaaatttcaaaagggtcattttatatttcatttttaaagt |
223 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1116824 |
ttcaccatttttttaaaacaattttctgtaaattttgtgttttctgaagtctgtgagcactaaatttcaaaagggtcattttatatttcatttttaaagt |
1116923 |
T |
|
| Q |
224 |
taaaaaacctatcttttattgttgttgttgtcgtaggaatattgggcttctgttggatgttctataatgcaatgcagc |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1116924 |
taaaaaacctatcttttattgttgttgttgtcgtaggaatattgggcttctgttggatgttctataatgcaatgcagc |
1117001 |
T |
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