View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21433_low_11 (Length: 350)
Name: NF21433_low_11
Description: NF21433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21433_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 26 - 345
Target Start/End: Original strand, 417196 - 417516
Alignment:
| Q |
26 |
gatattatatagtctctgcactgcacaggaaacagcaatgcaacaataacaattagtaagcagaaccatgacatcactaacagaaattgggataacacca |
125 |
Q |
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| T |
417196 |
gatattatatagtctctgcactgcacaggaaacagcaatgcaacaataataattagtaagcagaaccatgacatcactaacagaaattgggataacacca |
417295 |
T |
|
| Q |
126 |
ttataactaaatgacactaattcttgtaacttgctgctgtgatccatattgttgcagcagcaggtcaattgttcctcttgataccaacacaacacttgat |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
417296 |
ttataactaaatgacactaattcttgtaacttgctgctgtgatccatattgttgcagcagcaggtcaattgttcctcttgataccaacacaacacttgat |
417395 |
T |
|
| Q |
226 |
cc-ttttttatgtcacacttactccacctgctacttctatattgtttgaccctattcttgttaagttcttgtctcaattaccttgagtgctgttgttttt |
324 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
417396 |
cctttttttatgtcacacttactccacctgctacttctatattgtttgaccctattcttgttaagttcttgtctcaattaccttgagtgctgttgttttt |
417495 |
T |
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| Q |
325 |
tccactccactagtaatacat |
345 |
Q |
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||||||||||||||||||||| |
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| T |
417496 |
tccactccactagtaatacat |
417516 |
T |
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