View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21433_low_17 (Length: 271)
Name: NF21433_low_17
Description: NF21433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21433_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 40166922 - 40166707
Alignment:
| Q |
20 |
ctaattcgctccatttatggaaaattaaaacctttaggaccaaattttgattgatatttttcttcttcggttacatgtgctttatttgattcatttataa |
119 |
Q |
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| T |
40166922 |
ctaattcgctccatttatggaaaattaaaacctttaggaccaaattttgattgatatttttcttcttcggttacatgtgctttatttgattcatttataa |
40166823 |
T |
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| Q |
120 |
gcaataataatcagctcccattttacgttctatttgctttccctatagatgtatatcattaaccgttatagaatacaaacaaaattgaaatactagtagc |
219 |
Q |
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| T |
40166822 |
gcaataataatcagctcccattttacgttctatttgctttccctgtagatgtatatcattaaccgttatagaatacaaacaaaattgaaatactagtagc |
40166723 |
T |
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| Q |
220 |
tttaaaaccctatgct |
235 |
Q |
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| T |
40166722 |
tttaaaaccctatgct |
40166707 |
T |
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