View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21434_high_14 (Length: 251)
Name: NF21434_high_14
Description: NF21434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21434_high_14 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 44114851 - 44115050
Alignment:
| Q |
1 |
tgggtactgcaatagacacaattaagaattgcgatgatcaagcttctattcacattggaatattattcatttttgggttcagttaagattttataattgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44114851 |
tgggtactgcaatagacacaattaagaattgcgatgatcaagcttctattcacattggaatattattcatttttgggttcagttaagattttataattgc |
44114950 |
T |
|
| Q |
101 |
tatttagtttccaatgtgaataattaactctggtttcaaagtgggattttatggtgctttatatctcagtcttgaaacataaagatctgattgatcgttt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44114951 |
tatttagtttccaatgtgaataattaactctggtttcaaagtgggattttctggtgctttatatctcagtcttgaaacataaagatctgattgatcgttt |
44115050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University