View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21434_low_6 (Length: 384)
Name: NF21434_low_6
Description: NF21434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21434_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 32 - 310
Target Start/End: Complemental strand, 10377433 - 10377155
Alignment:
| Q |
32 |
tgaaattcccgtaataacatacctagcaaacttgttcctacgattacgcttagcagcatcacgaactcttcttttcttctcatcctgtggattctcaaaa |
131 |
Q |
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| T |
10377433 |
tgaaattcccgtaataacatacctagcaaacttgttcctacgattacgcttagcagcatcacgaactcttcttttcttctcatcctgtggattctcaaaa |
10377334 |
T |
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| Q |
132 |
cgcgttcttctcttaaactcttgaataataccagcactgaaaacctctctacgaaacctactaataaacctctcttcaggctcatcatcttcaacaataa |
231 |
Q |
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||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
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| T |
10377333 |
cgctttcttctcttacactcttgaataataccagcactgaaaacctctctacgaaacctattaagaaacctctcttcaggctcatcatcttcaacaataa |
10377234 |
T |
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| Q |
232 |
cttgaacattgtaaggtgatgctgagaacacactgtttgatgttgagaaacctgaagacatatcttgtggaggttctgg |
310 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||| |
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| T |
10377233 |
tttgaacattgtaaggtgatgctgagaacacagtgtttgatgttgagaaacttgaagacatatcttgtggtggttctgg |
10377155 |
T |
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