View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21435_low_2 (Length: 751)

Name: NF21435_low_2
Description: NF21435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21435_low_2
NF21435_low_2
[»] chr4 (21 HSPs)
chr4 (524-736)||(4899969-4900180)
chr4 (520-568)||(45919513-45919561)
chr4 (520-614)||(13387730-13387823)
chr4 (520-568)||(4158617-4158665)
chr4 (520-568)||(41695386-41695434)
chr4 (510-582)||(42419701-42419773)
chr4 (510-550)||(42883472-42883512)
chr4 (521-574)||(4899415-4899469)
chr4 (520-576)||(550316-550373)
chr4 (510-567)||(21824549-21824606)
chr4 (510-567)||(21825154-21825210)
chr4 (520-561)||(29212010-29212051)
chr4 (520-569)||(41696125-41696174)
chr4 (520-568)||(46619633-46619681)
chr4 (510-569)||(36855670-36855729)
chr4 (520-582)||(6784843-6784905)
chr4 (521-567)||(31915167-31915212)
chr4 (521-571)||(36854912-36854962)
chr4 (510-571)||(12835178-12835239)
chr4 (513-582)||(19550217-19550286)
chr4 (512-569)||(24377954-24378011)
[»] scaffold0093 (2 HSPs)
scaffold0093 (520-694)||(22849-23022)
scaffold0093 (510-577)||(22764-22831)
[»] chr5 (14 HSPs)
chr5 (17-138)||(33626685-33626807)
chr5 (138-272)||(33626380-33626526)
chr5 (510-568)||(21148103-21148161)
chr5 (510-568)||(42521697-42521755)
chr5 (508-568)||(21145925-21145986)
chr5 (520-568)||(23206200-23206248)
chr5 (510-582)||(492127-492199)
chr5 (510-582)||(3259064-3259136)
chr5 (510-582)||(3259799-3259871)
chr5 (510-582)||(4737038-4737109)
chr5 (510-582)||(14481451-14481523)
chr5 (522-582)||(25836601-25836661)
chr5 (525-577)||(42519647-42519699)
chr5 (520-567)||(42520438-42520485)
[»] chr3 (27 HSPs)
chr3 (525-692)||(22258853-22259019)
chr3 (514-577)||(28907882-28907945)
chr3 (510-567)||(11238854-11238911)
chr3 (510-577)||(11238508-11238575)
chr3 (521-567)||(20199870-20199916)
chr3 (510-576)||(54584877-54584943)
chr3 (510-567)||(38798245-38798301)
chr3 (520-577)||(53949310-53949367)
chr3 (520-568)||(20200614-20200662)
chr3 (520-568)||(20202798-20202846)
chr3 (510-582)||(46914963-46915035)
chr3 (520-568)||(47167889-47167937)
chr3 (520-568)||(53950083-53950131)
chr3 (514-561)||(28908663-28908710)
chr3 (510-568)||(47169163-47169221)
chr3 (511-571)||(5531949-5532010)
chr3 (520-577)||(53948662-53948719)
chr3 (525-577)||(30833688-30833740)
chr3 (521-577)||(43400765-43400821)
chr3 (510-582)||(46915717-46915789)
chr3 (510-582)||(50802580-50802652)
chr3 (510-582)||(50873225-50873297)
chr3 (522-577)||(11239884-11239939)
chr3 (510-577)||(30834428-30834495)
chr3 (510-577)||(51827555-51827621)
chr3 (521-574)||(22259563-22259617)
chr3 (510-567)||(16302625-16302682)
[»] scaffold0009 (2 HSPs)
scaffold0009 (510-577)||(105502-105569)
scaffold0009 (520-577)||(106286-106343)
[»] scaffold0301 (1 HSPs)
scaffold0301 (510-561)||(20722-20773)
[»] chr8 (17 HSPs)
chr8 (510-577)||(39861648-39861715)
chr8 (521-577)||(25129352-25129408)
chr8 (520-567)||(5881145-5881192)
chr8 (510-577)||(29267936-29268003)
chr8 (526-568)||(29266170-29266212)
chr8 (523-568)||(5332179-5332224)
chr8 (510-571)||(16847675-16847736)
chr8 (520-577)||(25128588-25128645)
chr8 (510-582)||(24023013-24023085)
chr8 (510-577)||(29268811-29268879)
chr8 (520-568)||(42986648-42986696)
chr8 (527-577)||(36732081-36732131)
chr8 (515-577)||(39131025-39131087)
chr8 (520-577)||(3583287-3583344)
chr8 (520-577)||(3583638-3583695)
chr8 (520-577)||(17450528-17450585)
chr8 (510-551)||(34654941-34654982)
[»] chr7 (30 HSPs)
chr7 (510-577)||(30469504-30469571)
chr7 (510-577)||(43334123-43334189)
chr7 (510-568)||(8487021-8487079)
chr7 (510-568)||(8512696-8512754)
chr7 (520-577)||(31179915-31179972)
chr7 (510-577)||(3163494-3163561)
chr7 (520-577)||(3162871-3162928)
chr7 (510-583)||(37706312-37706385)
chr7 (520-568)||(8487814-8487862)
chr7 (520-568)||(8513469-8513517)
chr7 (510-582)||(30001795-30001867)
chr7 (510-582)||(30469429-30469501)
chr7 (520-568)||(38059849-38059897)
chr7 (510-577)||(3219296-3219363)
chr7 (522-577)||(21415391-21415446)
chr7 (510-577)||(30471002-30471069)
chr7 (510-577)||(43334723-43334790)
chr7 (525-574)||(4962374-4962424)
chr7 (509-571)||(30468684-30468746)
chr7 (520-577)||(3474904-3474961)
chr7 (520-577)||(30659857-30659914)
chr7 (520-577)||(37422561-37422618)
chr7 (522-582)||(30002549-30002609)
chr7 (510-582)||(32021214-32021286)
chr7 (520-567)||(46428125-46428172)
chr7 (520-582)||(24307098-24307160)
chr7 (510-568)||(31178632-31178690)
chr7 (520-582)||(42489963-42490025)
chr7 (520-577)||(3475567-3475624)
chr7 (522-567)||(43742724-43742769)
[»] chr6 (15 HSPs)
chr6 (510-577)||(19653861-19653928)
chr6 (510-577)||(8993581-8993648)
chr6 (510-577)||(9018028-9018095)
chr6 (520-568)||(19651073-19651121)
chr6 (510-577)||(1370151-1370218)
chr6 (511-577)||(14537998-14538064)
chr6 (515-568)||(9280898-9280951)
chr6 (520-577)||(18153260-18153317)
chr6 (520-577)||(18649895-18649952)
chr6 (520-577)||(32907429-32907486)
chr6 (510-577)||(1371049-1371115)
chr6 (510-576)||(19820864-19820930)
chr6 (520-561)||(8992909-8992950)
chr6 (520-561)||(9017356-9017397)
chr6 (510-571)||(18969852-18969913)
[»] chr1 (29 HSPs)
chr1 (510-577)||(21791478-21791545)
chr1 (510-569)||(26212910-26212969)
chr1 (510-577)||(46284746-46284813)
chr1 (510-568)||(5497293-5497351)
chr1 (520-577)||(21790752-21790809)
chr1 (520-568)||(7013041-7013089)
chr1 (510-562)||(10716944-10716996)
chr1 (520-568)||(39848883-39848931)
chr1 (520-568)||(47374849-47374897)
chr1 (520-567)||(5496547-5496594)
chr1 (510-577)||(16960123-16960190)
chr1 (510-577)||(29858915-29858981)
chr1 (510-569)||(39870815-39870874)
chr1 (510-569)||(42986748-42986807)
chr1 (520-577)||(5216563-5216620)
chr1 (520-577)||(14886826-14886883)
chr1 (512-577)||(40959768-40959833)
chr1 (520-577)||(42987079-42987136)
chr1 (520-577)||(46285543-46285600)
chr1 (510-561)||(27651324-27651375)
chr1 (510-569)||(48577560-48577619)
chr1 (511-577)||(4594699-4594765)
chr1 (520-582)||(24081456-24081518)
chr1 (510-568)||(39847800-39847857)
chr1 (520-577)||(4595572-4595629)
chr1 (520-577)||(14886154-14886211)
chr1 (520-561)||(16959505-16959546)
chr1 (520-553)||(17606265-17606298)
chr1 (524-577)||(27652097-27652150)
[»] chr2 (19 HSPs)
chr2 (510-568)||(42848709-42848767)
chr2 (510-577)||(8911158-8911225)
chr2 (505-561)||(121291-121347)
chr2 (510-582)||(863198-863270)
chr2 (520-568)||(42849504-42849552)
chr2 (520-567)||(122961-123008)
chr2 (510-577)||(19386287-19386354)
chr2 (521-567)||(13328818-13328864)
chr2 (511-577)||(20202643-20202709)
chr2 (505-567)||(39629521-39629583)
chr2 (520-561)||(4776989-4777030)
chr2 (520-577)||(8911833-8911890)
chr2 (512-577)||(13327738-13327803)
chr2 (510-577)||(24429610-24429677)
chr2 (510-577)||(27059168-27059235)
chr2 (520-561)||(4776249-4776290)
chr2 (510-567)||(34453012-34453069)
chr2 (520-569)||(38273553-38273602)
chr2 (520-569)||(38985992-38986041)
[»] scaffold0155 (1 HSPs)
scaffold0155 (510-577)||(990-1057)
[»] scaffold0853 (1 HSPs)
scaffold0853 (510-561)||(607-658)
[»] scaffold0188 (1 HSPs)
scaffold0188 (520-577)||(25616-25673)
[»] scaffold0050 (1 HSPs)
scaffold0050 (510-582)||(8403-8475)


Alignment Details
Target: chr4 (Bit Score: 152; Significance: 4e-80; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 524 - 736
Target Start/End: Complemental strand, 4900180 - 4899969
Alignment:
Q  524 ggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgatttagtatttgatcaaaggctcatattaaatcattaatgtagtt 623  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4900180 ggatcaaatgacaccaaggtgtcaaattaatcttgacaccaaatctcaaccattgatt-agtatttgatcaaaggctcatattaaatcattaatgtagtt 4900082  T
Q  624 catgtgactattattatttccaattttgcgtcttcttcaaccttaaggttttcctaattcatgtctattctnnnnnnntcttcatgatgagtaattaata 723  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||        |||||| |||||||||||||     
T  4900081 catgtgactattattatttccaattttgtgtcttcttcaactttaaggttttcctaattcatgtctattctaaaaaaaccttcataatgagtaattaatg 4899982  T
Q  724 accacttcctttg 736  Q
    |||||||||||||    
T  4899981 accacttcctttg 4899969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 45919513 - 45919561
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  45919513 gataggatcaaatgacaccaaggtgtcaaattaaatttgacatcaaatc 45919561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 614
Target Start/End: Complemental strand, 13387823 - 13387730
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgatttagtatttgatcaaaggctcatattaaatcatt 614  Q
    |||| |||||| |||||| ||| ||||||||||||||| ||| |||||||||||| || ||||| ||||||||||| | |||||| ||| |||||    
T  13387823 gatatgatcaattgacaccaagatgtcaaattaattttaacaccaaatctcaaccctttattta-tatttgatcaatgactcataataattcatt 13387730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 4158665 - 4158617
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  4158665 gataggatcaaatgacacttaggtgtcaaattaaatttgacaccaaatc 4158617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 41695386 - 41695434
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  41695386 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 41695434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 42419773 - 42419701
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  42419773 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattt 42419701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 550
Target Start/End: Complemental strand, 42883512 - 42883472
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaat 550  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  42883512 atatatatgggataggatcaaatgacactaaggtgtcaaat 42883472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 4899415 - 4899469
Alignment:
Q  521 ataggatcaaatgacactaaggtgtcaaatt-aattttgacatcaaatctcaacc 574  Q
    ||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||    
T  4899415 ataggatcaaatgccaccaaggtgtcaaattaaattttgacaccaaatctcaacc 4899469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 576
Target Start/End: Complemental strand, 550373 - 550316
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaa-ttaattttgacatcaaatctcaaccat 576  Q
    |||||||||||||||||| | ||||||||| | |||||||||||||||||| ||||||    
T  550373 gataggatcaaatgacaccatggtgtcaaactaaattttgacatcaaatcttaaccat 550316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 21824549 - 21824606
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||| ||||||| |||||    
T  21824549 atatatatgggatatgatcaaatgacatcaaggtgtcaaattaaatttgacaccaaat 21824606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 567
Target Start/End: Complemental strand, 21825210 - 21825154
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||| |||||||||||||||||| | ||||||||||||| ||||||| |||||    
T  21825210 atatatatg-gataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaat 21825154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 561
Target Start/End: Original strand, 29212010 - 29212051
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  29212010 gataggatcaaatgacaccaaggtgtcaaattaaatttgaca 29212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 41696174 - 41696125
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    ||||||||||||||| || ||||||||||||||| ||||||| |||||||    
T  41696174 gataggatcaaatgataccaaggtgtcaaattaaatttgacaccaaatct 41696125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 46619681 - 46619633
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||| ||||||||||||| ||||||||||||||| ||||||| ||||||    
T  46619681 gatatgatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 46619633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 569
Target Start/End: Complemental strand, 36855729 - 36855670
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| |||||||    
T  36855729 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatct 36855670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 582
Target Start/End: Original strand, 6784843 - 6784905
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  6784843 gataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattt 6784905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 567
Target Start/End: Original strand, 31915167 - 31915212
Alignment:
Q  521 ataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  31915167 ataggatcaaatgacac-aaggtgtcaaattaaatttgacaccaaat 31915212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 571
Target Start/End: Original strand, 36854912 - 36854962
Alignment:
Q  521 ataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctca 571  Q
    ||||||||||||||||| | ||||||||| | | |||||||||||||||||    
T  36854912 ataggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatctca 36854962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 571
Target Start/End: Complemental strand, 12835239 - 12835178
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctca 571  Q
    ||||||||| | |||||||||||||||| | ||||||||| | | ||||||| |||||||||    
T  12835239 atatatatgggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctca 12835178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 582
Target Start/End: Complemental strand, 19550286 - 19550217
Alignment:
Q  513 tatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    |||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||| | ||||| ||||    
T  19550286 tatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattt 19550217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 569
Target Start/End: Complemental strand, 24378011 - 24377954
Alignment:
Q  512 atatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    |||||||  ||||||||| |||||| ||||||||||||| || ||| |||||||||||    
T  24378011 atatatggaataggatcagatgacattaaggtgtcaaataaaatttaacatcaaatct 24377954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 115; Significance: 5e-58; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 520 - 694
Target Start/End: Original strand, 22849 - 23022
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgatttagtatttgatcaaaggctcatattaaatcattaatgt 619  Q
    ||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||    
T  22849 gataggatcaaataacactaagatgtcaaattaatcttgacaccaaatctcaaccattc-tttaatatttgatcaaaggctcatattaattcattaatgt 22947  T
Q  620 agttcatgtgactattattatttccaattttgcgtcttcttcaaccttaaggttttcctaattcatgtctattct 694  Q
    |  ||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  22948 aactcacgtgactattattatttccaattttgtgtcttcttcaacctttaggttttcctaattcatgtatattct 23022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 22831 - 22764
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||||||||||||| | ||||||||| | | ||||||| ||||| ||| |||||    
T  22831 atatatatgagataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatttcatccatt 22764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 3e-53; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 33626807 - 33626685
Alignment:
Q  17 cagtataaagatctaacacaatgacatgaagacataaaacttgccagtcgtaaactcatggtaaaattttagataacctt-gtcaagaatttcgacgtgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  33626807 cagtataaagatctaacacaatgacatgaagacataaaacttgccagtcgtagactcatggtaaaatttgagataaccttagtcaagaatttcgacgtgt 33626708  T
Q  116 aaaatctaagataatccaacgtt 138  Q
    |||||||||||||||||||||||    
T  33626707 aaaatctaagataatccaacgtt 33626685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 138 - 272
Target Start/End: Complemental strand, 33626526 - 33626380
Alignment:
Q  138 tttatttttcttgttgtttatcgtcttctcttgaatacacatggatcaagatacgatgacccaataaggatccgattcgatctcgcac------------ 225  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||                
T  33626526 tttatttttcttgttgtttatcgtcttctcctgtatacacatggatcaagatacgatgacccaataaggatctgattcgatctcgcacaatacgcaacaa 33626427  T
Q  226 ttgttaaatgattttttatttgtgatttaaaatcagagagaattcct 272  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33626426 ttgttaaatgattttttatttgtgatttaaaattagagagaattcct 33626380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 21148161 - 21148103
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  21148161 atatatatgagataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 21148103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 42521755 - 42521697
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  42521755 atatatatgggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 42521697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 508 - 568
Target Start/End: Original strand, 21145925 - 21145986
Alignment:
Q  508 aaatatatat-gagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  21145925 aaatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 21145986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 23206248 - 23206200
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  23206248 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 23206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 492199 - 492127
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||| | ||||| ||||    
T  492199 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattt 492127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 3259064 - 3259136
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||| | ||||| ||||    
T  3259064 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattt 3259136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 3259871 - 3259799
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| | |||||||||||||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  3259871 atatatatgggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattt 3259799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 4737038 - 4737109
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||| ||||||||||||| | ||||||||| ||| ||||||||||||||| | ||||| ||||    
T  4737038 atatatatg-gataagatcaaatgacaccatggtgtcaaaataagtttgacatcaaatcttatccattcattt 4737109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 14481523 - 14481451
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||| | ||||| ||||    
T  14481523 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattt 14481451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 25836661 - 25836601
Alignment:
Q  522 taggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    |||||||||||||||| | ||||||||| | ||||||||| ||||||||| ||||| ||||    
T  25836661 taggatcaaatgacaccatggtgtcaaaattattttgacaccaaatctcatccattcattt 25836601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 577
Target Start/End: Original strand, 42519647 - 42519699
Alignment:
Q  525 gatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  42519647 gatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcataaccatt 42519699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 567
Target Start/End: Complemental strand, 42520485 - 42520438
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||||||| |||| ||||||||||||||| ||||||| |||||    
T  42520485 gataggatcaaataacaccaaggtgtcaaattaaatttgacaccaaat 42520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 5e-49; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 525 - 692
Target Start/End: Original strand, 22258853 - 22259019
Alignment:
Q  525 gatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgatttagtatttgatcaaaggctcatattaaatcattaatgtagttc 624  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||| | || ||||||| ||||| |||||| ||    
T  22258853 gatcaaatgacaccaatgtgtcaaattaatcttgacatcaaatctcaaccatttatt-agtatttgaacaatgacttatattaattcatttatgtagctc 22258951  T
Q  625 atgtgactattattatttccaattttgcgtcttcttcaaccttaaggttttcctaattcatgtctatt 692  Q
    | |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  22258952 acgtgattattattatttccaattttgtgtcttcttcaaccttcaggttttcctaattcatgtctatt 22259019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 28907882 - 28907945
Alignment:
Q  514 atatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  28907882 atatgagacgggatcaaatgacactaaggtgtcaaattaaatttgacatcaaatcctaaccatt 28907945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 11238854 - 11238911
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | ||||| |||||    
T  11238854 atatatatgagataagatcaaatgacactaaggtgtcaaattaaatgtgacaccaaat 11238911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 11238508 - 11238575
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||  ||||||||||||||| ||||||| ||||||  |||||||    
T  11238508 atatatatgggataggatcaaatgacatcaaggtgtcaaattaaatttgacaccaaatcctaaccatt 11238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 567
Target Start/End: Original strand, 20199870 - 20199916
Alignment:
Q  521 ataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  20199870 ataggatcaaatgacaccaaggtgtcaaattaaatttgacatcaaat 20199916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 510 - 576
Target Start/End: Complemental strand, 54584943 - 54584877
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccat 576  Q
    ||||||||| |||||||||||||||||| | ||||||||| ||| ||| ||||||||||| ||||||    
T  54584943 atatatatgggataggatcaaatgacaccatggtgtcaaactaaatttaacatcaaatcttaaccat 54584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 38798245 - 38798301
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  38798245 atatatatg-gataggatcaaatgacactatggtgtcaaattaaatttgacaccaaat 38798301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 53949367 - 53949310
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  53949367 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcataaccatt 53949310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 20200662 - 20200614
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  20200662 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 20200614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 20202846 - 20202798
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  20202846 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 20202798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 46914963 - 46915035
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  46914963 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattt 46915035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 47167889 - 47167937
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  47167889 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 47167937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 53950131 - 53950083
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  53950131 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 53950083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 561
Target Start/End: Complemental strand, 28908710 - 28908663
Alignment:
Q  514 atatgagataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  28908710 atatgggataggatcaaataacactaaggtgtcaaattaaatttgaca 28908663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 47169221 - 47169163
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||  |||| ||||||||||||| ||||||||||||||| ||||||| ||||||    
T  47169221 atatatataggataagatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 47169163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 571
Target Start/End: Complemental strand, 5532010 - 5531949
Alignment:
Q  511 tatatatgagataggatcaaatgacactaaggtgtcaaatt-aattttgacatcaaatctca 571  Q
    |||||||  |||||||||||||||||||||| |||| |||| |||||||||| |||||||||    
T  5532010 tatatataggataggatcaaatgacactaagatgtcgaattaaattttgacaccaaatctca 5531949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 53948662 - 53948719
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  53948662 gataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 53948719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 577
Target Start/End: Original strand, 30833688 - 30833740
Alignment:
Q  525 gatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  30833688 gatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctaaccatt 30833740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 577
Target Start/End: Complemental strand, 43400821 - 43400765
Alignment:
Q  521 ataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  43400821 ataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 43400765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 46915789 - 46915717
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||| | ||||| ||||    
T  46915789 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattt 46915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 50802652 - 50802580
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| ||||||||||| |||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  50802652 atatatatgggataggatcaattgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattt 50802580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 50873225 - 50873297
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| ||||||||||| |||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  50873225 atatatatgggataggatcaattgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattt 50873297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 577
Target Start/End: Complemental strand, 11239939 - 11239884
Alignment:
Q  522 taggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||| |||| ||||||||||||||| | ||||| ||||||||| |||||    
T  11239939 taggatcaaataacaccaaggtgtcaaattaaatatgacaccaaatctcatccatt 11239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 30834495 - 30834428
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||  |||||||||||||||||  ||||| ||||||||| |||||||| |||||  |||||||    
T  30834495 atatatataggataggatcaaatgacatcaaggtatcaaattaaatttgacattaaatcctaaccatt 30834428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 51827555 - 51827621
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||| ||||||| ||||||  |||||||    
T  51827555 atatatatg-gatatgatcaaatgacatcaaggtgtcaaattaaatttgacaccaaatcataaccatt 51827621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 574
Target Start/End: Complemental strand, 22259617 - 22259563
Alignment:
Q  521 ataggatcaaatgacactaaggtgtcaaatt-aattttgacatcaaatctcaacc 574  Q
    |||||||||||| |||  ||||||||||||| |||||||||| ||||||||||||    
T  22259617 ataggatcaaataacatcaaggtgtcaaattaaattttgacaccaaatctcaacc 22259563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 16302625 - 16302682
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| |||||    
T  16302625 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaat 16302682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 105502 - 105569
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||    
T  105502 atatatatgggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcttaaccatt 105569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 106343 - 106286
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||| ||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  106343 gatatgatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctaaccatt 106286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 561
Target Start/End: Original strand, 20722 - 20773
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  20722 atatatatgagataggatcaaatgacaccaaggtgtcaaattaaatttgaca 20773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 39861715 - 39861648
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||  |||||||    
T  39861715 atatatatgggataggatcaaatgacaccaaggtgtcaaattaaatttaacatcaaatcctaaccatt 39861648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 577
Target Start/End: Complemental strand, 25129408 - 25129352
Alignment:
Q  521 ataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||  |||||||    
T  25129408 ataggaccatatgacactaaggtgtcaaattaaatttgacatcaaatcgtaaccatt 25129352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 520 - 567
Target Start/End: Original strand, 5881145 - 5881192
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  5881145 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaat 5881192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 29267936 - 29268003
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| |||||    
T  29267936 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccatt 29268003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 29266170 - 29266212
Alignment:
Q  526 atcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  29266170 atcaaatgacaccaaggtgtcaaattaaatttgacatcaaatc 29266212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 568
Target Start/End: Complemental strand, 5332224 - 5332179
Alignment:
Q  523 aggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  5332224 aggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 5332179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 571
Target Start/End: Complemental strand, 16847736 - 16847675
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctca 571  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| |||||||||    
T  16847736 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctca 16847675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 25128588 - 25128645
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||| ||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  25128588 gataagatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcataaccatt 25128645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 24023085 - 24023013
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| | |||||||||||||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  24023085 atatatatgggttaggatcaaatgacaccatggtgtcaaaattagtttgacaacaaatctcatccattcattt 24023013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 29268879 - 29268811
Alignment:
Q  510 atatatat-gagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||| |||||| ||||||||||||| | ||||||||| | | ||||||||||||||||| |||||    
T  29268879 atatatatagagatatgatcaaatgacaccatggtgtcaaaattaatttgacatcaaatctcatccatt 29268811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 42986648 - 42986696
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||    
T  42986648 gataggatcaaatgacaccaaagtgtcaaattaaatttgacaccaaatc 42986696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 527 - 577
Target Start/End: Complemental strand, 36732131 - 36732081
Alignment:
Q  527 tcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  36732131 tcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcataaccatt 36732081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 515 - 577
Target Start/End: Complemental strand, 39131087 - 39131025
Alignment:
Q  515 tatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||| ||| ||||||||||||||  |||||||||||||| ||||||| ||||||  |||||||    
T  39131087 tatgggatgggatcaaatgacacccaggtgtcaaattaaatttgacaccaaatcataaccatt 39131025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 3583344 - 3583287
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| |||||    
T  3583344 gataggatcaaatgacaccatggtgtcaaaattaatttgacaccaaatctcatccatt 3583287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 3583695 - 3583638
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| |||||    
T  3583695 gataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccatt 3583638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 17450528 - 17450585
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||||||||||   ||||||||||||| ||||||| ||||||  |||||||    
T  17450528 gataggatcaaatgacaccgtggtgtcaaattaaatttgacaccaaatcataaccatt 17450585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 551
Target Start/End: Complemental strand, 34654982 - 34654941
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaatt 551  Q
    ||||||||| |||||||||||||||||| | |||||||||||    
T  34654982 atatatatgggataggatcaaatgacaccatggtgtcaaatt 34654941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 30469504 - 30469571
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  30469504 atatatatgggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctaaccatt 30469571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 43334123 - 43334189
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||    
T  43334123 atatatatg-gataggatcaaatgacaccaaggtgtcaaattaagtttgacatcaaatcataaccatt 43334189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 8487021 - 8487079
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  8487021 atatatatgggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 8487079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 8512696 - 8512754
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  8512696 atatatatgggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 8512754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 31179972 - 31179915
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||    
T  31179972 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcttaaccatt 31179915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 3163561 - 3163494
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  3163561 atatatatgggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 3163494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 3162871 - 3162928
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  3162871 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctaaccatt 3162928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 510 - 583
Target Start/End: Complemental strand, 37706385 - 37706312
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattta 583  Q
    ||||||||| | |||||||||||||||||| ||||||||| | | ||||||| ||||||||| ||||| |||||    
T  37706385 atatatatgggttaggatcaaatgacactatggtgtcaaaattagtttgacaccaaatctcatccattcattta 37706312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 8487862 - 8487814
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  8487862 gataggatcaaatgacacgaaggtgtcaaattaaatttgacaccaaatc 8487814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 8513517 - 8513469
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  8513517 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 8513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 30001795 - 30001867
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||||| ||||||||| | | ||||||| ||||||| | ||||| ||||    
T  30001795 atatatatgggataggatcaaatgacactatggtgtcaaaattagtttgacaccaaatcttatccattcattt 30001867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 582
Target Start/End: Complemental strand, 30469501 - 30469429
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||||||||||| | ||||| ||||    
T  30469501 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatcttatccattcattt 30469429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 38059849 - 38059897
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  38059849 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 38059897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 3219296 - 3219363
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| | |||||||||||||||| ||||||||||||||| | |||||  |||||||| |||||    
T  3219296 atatatatgggttaggatcaaatgacaccaaggtgtcaaattaaatatgacactaaatctcatccatt 3219363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 577
Target Start/End: Complemental strand, 21415446 - 21415391
Alignment:
Q  522 taggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||| ||||||||||||||| | ||||| ||||||||| |||||    
T  21415446 taggatcaaatgacaccaaggtgtcaaattaaatatgacaccaaatctcatccatt 21415391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 30471069 - 30471002
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| |||||    
T  30471069 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccatt 30471002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 43334790 - 43334723
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | | ||||||||||| ||||||| ||||||  |||||||    
T  43334790 atatatatgggataggatcaaatgacaccatgatgtcaaattaaatttgacaccaaatcataaccatt 43334723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 574
Target Start/End: Original strand, 4962374 - 4962424
Alignment:
Q  525 gatcaaatgacactaaggtgtcaaatt-aattttgacatcaaatctcaacc 574  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  4962374 gatcaaatgacaccaaggtgtcaaattaaattttgacaccaaatctcaacc 4962424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 509 - 571
Target Start/End: Original strand, 30468684 - 30468746
Alignment:
Q  509 aatatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctca 571  Q
    |||||||||||| |||||||||||||||| | ||||||||| | | ||||||| |||||||||    
T  30468684 aatatatatgagttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctca 30468746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 3474904 - 3474961
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||||||| |||| ||||||||||||| ||||||| ||||||  |||||||    
T  3474904 gataggatcaaatgatactatggtgtcaaattaaatttgacaccaaatcataaccatt 3474961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 30659857 - 30659914
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  30659857 gataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 30659914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 37422561 - 37422618
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||||||| || | ||||||||||||| ||||||||||||||  |||||||    
T  37422561 gataggatcaaatgataccatggtgtcaaattaaatttgacatcaaatcataaccatt 37422618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 30002609 - 30002549
Alignment:
Q  522 taggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    |||||||||||||||| | ||||||||| | | ||||||||||||||||| ||||| ||||    
T  30002609 taggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatctcatccattcattt 30002549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 32021214 - 32021286
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||| | ||||| ||||    
T  32021214 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttacccattcattt 32021286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 567
Target Start/End: Complemental strand, 46428172 - 46428125
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    |||||||||||||||||| | ||||||||||||| ||||||| |||||    
T  46428172 gataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaat 46428125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 582
Target Start/End: Complemental strand, 24307160 - 24307098
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    |||||||||||||||||| | | ||||||| | | ||||||||||||||||| ||||| ||||    
T  24307160 gataggatcaaatgacaccatgatgtcaaaattagtttgacatcaaatctcatccattcattt 24307098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 31178632 - 31178690
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||  |||| ||||||||||||| ||| ||||||||||| ||||||| ||||||    
T  31178632 atatatataggatatgatcaaatgacaccaagatgtcaaattaaatttgacaccaaatc 31178690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 582
Target Start/End: Complemental strand, 42490025 - 42489963
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  42490025 gataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattt 42489963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 3475624 - 3475567
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | |||||||||| || ||||||| ||||||  |||||||    
T  3475624 gataggatcaaatgacaccatggtgtcaaatcaaatttgacaccaaatcataaccatt 3475567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 567
Target Start/End: Original strand, 43742724 - 43742769
Alignment:
Q  522 taggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    |||||||||||||||  ||||| ||||||||| |||||||||||||    
T  43742724 taggatcaaatgacatcaaggtatcaaattaaatttgacatcaaat 43742769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 19653928 - 19653861
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  19653928 atatatatgggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctaaccatt 19653861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 8993648 - 8993581
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  8993648 atatatatgggataggatcaaatgacaccacggtgtcaaattaaatttgacaccaaatcataaccatt 8993581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 9018095 - 9018028
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  9018095 atatatatgggataggatcaaatgacaccacggtgtcaaattaaatttgacaccaaatcataaccatt 9018028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 19651073 - 19651121
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  19651073 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 19651121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 1370151 - 1370218
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| |||||    
T  1370151 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccatt 1370218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 577
Target Start/End: Original strand, 14537998 - 14538064
Alignment:
Q  511 tatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||| | ||||||||||| |||||||||||||||||||| |  |||||||||| ||| |||||    
T  14537998 tatatatgggttaggatcaaataacactaaggtgtcaaattaaatacgacatcaaatttcatccatt 14538064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 568
Target Start/End: Complemental strand, 9280951 - 9280898
Alignment:
Q  515 tatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||| |||||||||||||||||| || |||||||||||| ||||||| ||||||    
T  9280951 tatgcgataggatcaaatgacaccaatgtgtcaaattaaatttgacaccaaatc 9280898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 18153260 - 18153317
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| || |||||||||||| ||||||| ||||||  |||||||    
T  18153260 gataggatcaaatgacaccaaagtgtcaaattaaatttgacaccaaatcctaaccatt 18153317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 18649952 - 18649895
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  18649952 gataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 18649895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 32907429 - 32907486
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||||| | ||||||| ||||||| |||||||    
T  32907429 gataggatcaaatgacaccatggtgtcaaatttaatttgacaccaaatcttaaccatt 32907486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 1371115 - 1371049
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| |||||    
T  1371115 atatatatg-gataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccatt 1371049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 576
Target Start/End: Complemental strand, 19820930 - 19820864
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccat 576  Q
    ||||||||| ||||||||||||||| || | ||||| ||| ||| ||||||| ||||||| ||||||    
T  19820930 atatatatgggataggatcaaatgataccatggtgttaaactaaatttgacaccaaatcttaaccat 19820864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 561
Target Start/End: Original strand, 8992909 - 8992950
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  8992909 gataggatcaaatgacaccatggtgtcaaattaaatttgaca 8992950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 561
Target Start/End: Original strand, 9017356 - 9017397
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  9017356 gataggatcaaatgacaccatggtgtcaaattaaatttgaca 9017397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 571
Target Start/End: Complemental strand, 18969913 - 18969852
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctca 571  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | |||||||  ||||||||    
T  18969913 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacactaaatctca 18969852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 21791545 - 21791478
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||||||| ||||||| ||||||| |||||||    
T  21791545 atatatatgggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcttaaccatt 21791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 569
Target Start/End: Original strand, 26212910 - 26212969
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    ||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  26212910 atatatatgggataggatcaaatgacactaaggtgtcaaataaaatttgacaccaaatct 26212969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 46284746 - 46284813
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| || |||||||||||| ||||||||||||||  |||||||    
T  46284746 atatatatgggataggatcaaatgacaccaaagtgtcaaattaaatttgacatcaaatcctaaccatt 46284813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 5497351 - 5497293
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||| ||||||    
T  5497351 atatatatgagataggatcaaatgataccaaggtgtcaaattaaatttgacaccaaatc 5497293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 21790752 - 21790809
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  21790752 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcataaccatt 21790809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 7013089 - 7013041
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  7013089 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 7013041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 562
Target Start/End: Complemental strand, 10716996 - 10716944
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacat 562  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||| ||||||||    
T  10716996 atatatatgggataagatcaaatgacaccaaggtgtcaaattaaatttgacat 10716944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 39848931 - 39848883
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  39848931 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 39848883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 47374897 - 47374849
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  47374897 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 47374849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 520 - 567
Target Start/End: Original strand, 5496547 - 5496594
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  5496547 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaat 5496594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 16960190 - 16960123
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||  | ||||||||||||| ||||||| ||||||  |||||||    
T  16960190 atatatatgggataggatcaaatgacatcatggtgtcaaattaaatttgacaccaaatcataaccatt 16960123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 29858915 - 29858981
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||| ||||||| ||||||  |||||||    
T  29858915 atatatatg-gataggatcaaatgacaccaagatgtcaaattaaatttgacaccaaatcataaccatt 29858981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 569
Target Start/End: Complemental strand, 39870874 - 39870815
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    |||||||||||||| ||||||||||||| | ||||||||||| | ||||||| |||||||    
T  39870874 atatatatgagatatgatcaaatgacaccatggtgtcaaatttagtttgacaccaaatct 39870815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 569
Target Start/End: Original strand, 42986748 - 42986807
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    |||||||||||||| ||||||||||||| ||| ||| ||||||| ||||||| |||||||    
T  42986748 atatatatgagatatgatcaaatgacaccaagatgtaaaattaaatttgacaccaaatct 42986807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 5216563 - 5216620
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||||||| ||||| | ||||||| |||||||    
T  5216563 gataggatcaaatgacaccatggtgtcaaattaaatttgataccaaatcttaaccatt 5216620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 14886883 - 14886826
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  14886883 gataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 14886826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 40959833 - 40959768
Alignment:
Q  512 atatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| |||||    
T  40959833 atatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccatt 40959768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 42987136 - 42987079
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||||||||| || || |||||||||||| ||||||||||||||  |||||||    
T  42987136 gataggatcaaatgataccaaagtgtcaaattaaatttgacatcaaatcctaaccatt 42987079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 46285600 - 46285543
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||| ||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||    
T  46285600 gatatgatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctaaccatt 46285543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 561
Target Start/End: Original strand, 27651324 - 27651375
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    ||||||||| |||| ||||||||||||| | ||||||||||||| |||||||    
T  27651324 atatatatgggatatgatcaaatgacaccatggtgtcaaattaaatttgaca 27651375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 569
Target Start/End: Complemental strand, 48577619 - 48577560
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| |||||||    
T  48577619 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatct 48577560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 511 - 577
Target Start/End: Original strand, 4594699 - 4594765
Alignment:
Q  511 tatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||| ||| |||||    
T  4594699 tatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatttcatccatt 4594765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 582
Target Start/End: Original strand, 24081456 - 24081518
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  24081456 gataggatcaaatgacaccatggtgtcaaaattaatttgacaccaaatctcatccattcattt 24081518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 39847800 - 39847857
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||  |||||||||||||||||| || |||||||||||| ||||||| ||||||    
T  39847800 atatatataggataggatcaaatgacaccaa-gtgtcaaattaaatttgacaccaaatc 39847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 4595629 - 4595572
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| |||||    
T  4595629 gataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccatt 4595572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 14886154 - 14886211
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | |||||||||| || ||||||| ||||||  |||||||    
T  14886154 gataggatcaaatgacaccatggtgtcaaatcaaatttgacaccaaatcataaccatt 14886211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 561
Target Start/End: Original strand, 16959505 - 16959546
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    ||||||||||||| |||| ||||||||||||||| |||||||    
T  16959505 gataggatcaaataacaccaaggtgtcaaattaaatttgaca 16959546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 553
Target Start/End: Original strand, 17606265 - 17606298
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaa 553  Q
    |||||||||||||||||| |||||||||||||||    
T  17606265 gataggatcaaatgacaccaaggtgtcaaattaa 17606298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 577
Target Start/End: Complemental strand, 27652150 - 27652097
Alignment:
Q  524 ggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  27652150 ggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 27652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 42848709 - 42848767
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  42848709 atatatatgggataggatcaaatgacaataaggtgtcaaattaaatttgacaccaaatc 42848767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 8911158 - 8911225
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||||||||||||| | ||||||||||||  ||||||| ||||||  |||||||    
T  8911158 atatatatgagataggatcaaatgacaccatggtgtcaaattatatttgacaccaaatcataaccatt 8911225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 561
Target Start/End: Original strand, 121291 - 121347
Alignment:
Q  505 gtaaaatatatatgagataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    |||||||||||| | |||  ||||||||||||||||||||||||||||| |||||||    
T  121291 gtaaaatatataagggatgagatcaaatgacactaaggtgtcaaattaaatttgaca 121347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 863198 - 863270
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||||| ||||| ||||    
T  863198 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattt 863270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 42849552 - 42849504
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatc 568  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  42849552 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 42849504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 520 - 567
Target Start/End: Complemental strand, 123008 - 122961
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  123008 gataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaat 122961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 19386287 - 19386354
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||| ||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  19386287 atatatatgggatatgatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 19386354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 567
Target Start/End: Complemental strand, 13328864 - 13328818
Alignment:
Q  521 ataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  13328864 ataggatcaaatgacactaaggtgttaaattaaatttgacaccaaat 13328818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 577
Target Start/End: Original strand, 20202643 - 20202709
Alignment:
Q  511 tatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||| ||||||||||||||||||   ||||||||||||| ||||||| ||||||  |||||||    
T  20202643 tatatatgggataggatcaaatgacaccgtggtgtcaaattaaatttgacaccaaatcataaccatt 20202709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 567
Target Start/End: Complemental strand, 39629583 - 39629521
Alignment:
Q  505 gtaaaatatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    |||||||||||  | |||| ||||||||||||| ||||||||||||||| ||||||| |||||    
T  39629583 gtaaaatatattggggatatgatcaaatgacaccaaggtgtcaaattaaatttgacaccaaat 39629521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 561
Target Start/End: Complemental strand, 4777030 - 4776989
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  4777030 gataggatcaaatgacaccaaggtgtcaaattaaatttgaca 4776989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 8911890 - 8911833
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| | ||||||||||||| ||||||| ||||||  |||||||    
T  8911890 gataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 8911833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 13327738 - 13327803
Alignment:
Q  512 atatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||| |||| ||||||||||||| ||||||| ||||||| ||||||| ||||||  |||||||    
T  13327738 atatatgggataagatcaaatgacaccaaggtgttaaattaaatttgacaccaaatcctaaccatt 13327803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 24429610 - 24429677
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| |  |||||||| | | ||||||| ||||||||| |||||    
T  24429610 atatatatgggataggatcaaatgacaccatcgtgtcaaaattagtttgacaccaaatctcatccatt 24429677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 27059168 - 27059235
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||| ||| ||||||||| |||||    
T  27059168 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttcacaccaaatctcatccatt 27059235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 561
Target Start/End: Original strand, 4776249 - 4776290
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    |||| |||||||||||||||| |||||||||||| |||||||    
T  4776249 gatatgatcaaatgacactaaagtgtcaaattaaatttgaca 4776290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 567
Target Start/End: Complemental strand, 34453069 - 34453012
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaat 567  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| |||||    
T  34453069 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaat 34453012  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 38273553 - 38273602
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    ||||||||||||| |||| |||||||||||| || ||||||| |||||||    
T  38273553 gataggatcaaataacaccaaggtgtcaaataaaatttgacaccaaatct 38273602  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 38985992 - 38986041
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatct 569  Q
    |||||||||||||||||||| ||||||||| | | ||||||| |||||||    
T  38985992 gataggatcaaatgacactatggtgtcaaaattagtttgacaccaaatct 38986041  T

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Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 990 - 1057
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    ||||||||| |||||||||||||||||| || |||||||||||| ||||||| ||||||  |||||||    
T  990 atatatatgggataggatcaaatgacaccaaagtgtcaaattaaatttgacaccaaatcctaaccatt 1057  T

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Target: scaffold0853 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 561
Target Start/End: Original strand, 607 - 658
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgaca 561  Q
    ||||||||| |||||||||||||||||| || |||||||||||| |||||||    
T  607 atatatatgggataggatcaaatgacaccaatgtgtcaaattaaatttgaca 658  T

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Target: scaffold0188 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 25616 - 25673
Alignment:
Q  520 gataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccatt 577  Q
    |||||||||||||||||| || |||||||||||| ||||||| |||||| || |||||    
T  25616 gataggatcaaatgacaccaatgtgtcaaattaaatttgacaccaaatcccagccatt 25673  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 582
Target Start/End: Original strand, 8403 - 8475
Alignment:
Q  510 atatatatgagataggatcaaatgacactaaggtgtcaaattaattttgacatcaaatctcaaccattgattt 582  Q
    ||||||||| |||||||||||||||||| | ||||||||| | | ||||||| ||||||| | ||||| ||||    
T  8403 atatatatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattt 8475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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