View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21435_low_3 (Length: 672)

Name: NF21435_low_3
Description: NF21435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21435_low_3
NF21435_low_3
[»] chr5 (45 HSPs)
chr5 (1-672)||(1582058-1582719)
chr5 (1-672)||(1602096-1602757)
chr5 (62-257)||(8546113-8546308)
chr5 (62-241)||(8532417-8532595)
chr5 (432-585)||(42886391-42886544)
chr5 (457-561)||(14211138-14211242)
chr5 (433-569)||(16981203-16981340)
chr5 (498-561)||(28540979-28541042)
chr5 (433-562)||(28235498-28235628)
chr5 (433-569)||(18677494-18677633)
chr5 (498-573)||(10332605-10332680)
chr5 (498-561)||(19103540-19103603)
chr5 (62-124)||(9000789-9000851)
chr5 (433-494)||(27266966-27267027)
chr5 (433-569)||(43261848-43261984)
chr5 (433-488)||(10148711-10148766)
chr5 (498-556)||(2979384-2979442)
chr5 (433-598)||(19280945-19281111)
chr5 (499-585)||(19983368-19983454)
chr5 (442-569)||(28097074-28097203)
chr5 (442-569)||(30298130-30298258)
chr5 (433-561)||(2057875-2058005)
chr5 (442-573)||(7613083-7613214)
chr5 (523-598)||(38110980-38111055)
chr5 (498-561)||(39567254-39567317)
chr5 (433-552)||(7246871-7246992)
chr5 (441-487)||(7887050-7887096)
chr5 (515-561)||(8088280-8088326)
chr5 (433-494)||(7241695-7241756)
chr5 (433-494)||(10649366-10649427)
chr5 (441-494)||(20257800-20257853)
chr5 (433-494)||(26578162-26578223)
chr5 (433-494)||(30371637-30371698)
chr5 (442-494)||(34881631-34881683)
chr5 (433-557)||(7150376-7150502)
chr5 (433-583)||(21060297-21060448)
chr5 (431-573)||(27576375-27576518)
chr5 (524-598)||(19349679-19349753)
chr5 (433-509)||(781302-781379)
chr5 (457-543)||(3662786-3662874)
chr5 (499-552)||(6012213-6012266)
chr5 (499-552)||(13007189-13007242)
chr5 (508-573)||(19120879-19120944)
chr5 (499-552)||(35850759-35850812)
chr5 (499-552)||(38597757-38597810)
[»] chr4 (57 HSPs)
chr4 (432-561)||(8009398-8009527)
chr4 (457-561)||(27651876-27651980)
chr4 (461-561)||(36194645-36194745)
chr4 (433-561)||(37188631-37188759)
chr4 (498-561)||(22300826-22300889)
chr4 (433-585)||(18138926-18139080)
chr4 (433-568)||(43444315-43444452)
chr4 (433-585)||(49126139-49126293)
chr4 (452-561)||(868105-868214)
chr4 (452-573)||(2624439-2624560)
chr4 (433-567)||(9645580-9645716)
chr4 (433-569)||(10389783-10389920)
chr4 (457-569)||(35261138-35261251)
chr4 (433-561)||(51317908-51318037)
chr4 (441-559)||(21365135-21365255)
chr4 (498-573)||(52944288-52944363)
chr4 (436-569)||(31381701-31381835)
chr4 (441-494)||(1008225-1008278)
chr4 (433-561)||(4643780-4643910)
chr4 (499-560)||(28857380-28857441)
chr4 (431-561)||(38706747-38706879)
chr4 (514-590)||(9643381-9643457)
chr4 (434-585)||(10359560-10359712)
chr4 (453-561)||(18935710-18935818)
chr4 (442-561)||(25273811-25273935)
chr4 (498-574)||(33332627-33332703)
chr4 (433-598)||(56194521-56194690)
chr4 (502-561)||(9145955-9146014)
chr4 (433-566)||(12265377-12265511)
chr4 (498-561)||(31891360-31891423)
chr4 (523-573)||(18048885-18048935)
chr4 (433-566)||(21090075-21090209)
chr4 (433-585)||(35964988-35965142)
chr4 (445-561)||(1531841-1531960)
chr4 (433-494)||(34024542-34024603)
chr4 (433-561)||(53616687-53616818)
chr4 (442-561)||(29965565-29965687)
chr4 (442-494)||(43154127-43154179)
chr4 (519-570)||(21405524-21405575)
chr4 (502-561)||(52934013-52934072)
chr4 (457-547)||(1621588-1621678)
chr4 (432-478)||(2115710-2115756)
chr4 (499-561)||(4142821-4142883)
chr4 (499-573)||(4937812-4937885)
chr4 (499-561)||(47320460-47320522)
chr4 (433-487)||(47416806-47416860)
chr4 (498-572)||(52204389-52204463)
chr4 (441-478)||(14183733-14183770)
chr4 (499-552)||(17949399-17949452)
chr4 (499-552)||(17953251-17953304)
chr4 (433-494)||(20569174-20569235)
chr4 (499-552)||(22611164-22611217)
chr4 (499-552)||(35348288-35348341)
chr4 (502-559)||(35395741-35395798)
chr4 (499-552)||(43510178-43510231)
chr4 (490-598)||(9048634-9048741)
chr4 (503-547)||(49072808-49072852)
[»] chr7 (48 HSPs)
chr7 (453-561)||(35132857-35132965)
chr7 (461-563)||(3860890-3860992)
chr7 (457-561)||(1749220-1749324)
chr7 (433-566)||(6001931-6002066)
chr7 (431-569)||(35667261-35667400)
chr7 (433-566)||(31235824-31235959)
chr7 (457-561)||(48930690-48930791)
chr7 (433-561)||(1100804-1100932)
chr7 (490-569)||(969508-969587)
chr7 (498-561)||(28476182-28476245)
chr7 (498-573)||(38880635-38880710)
chr7 (499-561)||(24350910-24350972)
chr7 (433-569)||(46338963-46339102)
chr7 (433-569)||(14627908-14628046)
chr7 (498-561)||(22742899-22742962)
chr7 (498-561)||(24069463-24069526)
chr7 (433-569)||(42311190-42311328)
chr7 (490-561)||(44311860-44311931)
chr7 (491-561)||(3394426-3394496)
chr7 (433-518)||(36143776-36143862)
chr7 (433-557)||(1485298-1485423)
chr7 (434-569)||(1448859-1448995)
chr7 (431-494)||(20116491-20116554)
chr7 (433-561)||(26583624-26583754)
chr7 (433-496)||(32684595-32684658)
chr7 (433-561)||(35496212-35496342)
chr7 (433-598)||(48207812-48207978)
chr7 (433-494)||(2843333-2843394)
chr7 (433-561)||(23425409-23425538)
chr7 (433-494)||(26492275-26492336)
chr7 (499-552)||(26623865-26623918)
chr7 (445-585)||(32521940-32522081)
chr7 (433-561)||(45199069-45199198)
chr7 (433-494)||(46821924-46821985)
chr7 (433-509)||(21266302-21266378)
chr7 (441-484)||(5546277-5546320)
chr7 (535-585)||(17611139-17611189)
chr7 (499-571)||(37837517-37837586)
chr7 (498-572)||(41553492-41553566)
chr7 (498-572)||(41553837-41553911)
chr7 (498-572)||(41554182-41554256)
chr7 (499-552)||(19296833-19296886)
chr7 (499-552)||(30756894-30756947)
chr7 (499-552)||(34899682-34899735)
chr7 (499-552)||(42978573-42978626)
chr7 (498-542)||(21552427-21552471)
chr7 (453-481)||(25287342-25287370)
chr7 (517-569)||(29844844-29844896)
[»] chr2 (46 HSPs)
chr2 (459-598)||(36323799-36323936)
chr2 (433-562)||(2808508-2808637)
chr2 (457-561)||(10237290-10237394)
chr2 (498-573)||(12647978-12648053)
chr2 (433-569)||(26025439-26025576)
chr2 (498-561)||(3308908-3308971)
chr2 (433-562)||(34598902-34599032)
chr2 (433-561)||(40659969-40660096)
chr2 (433-569)||(3725095-3725232)
chr2 (433-561)||(8805781-8805910)
chr2 (433-569)||(30420591-30420730)
chr2 (441-559)||(23903314-23903434)
chr2 (433-569)||(4228046-4228185)
chr2 (433-494)||(6173546-6173607)
chr2 (433-494)||(31581825-31581886)
chr2 (433-561)||(8971664-8971795)
chr2 (442-569)||(32913165-32913293)
chr2 (441-560)||(40626066-40626186)
chr2 (433-598)||(45128118-45128285)
chr2 (433-583)||(4192753-4192904)
chr2 (522-569)||(10548229-10548276)
chr2 (498-561)||(29574698-29574761)
chr2 (499-561)||(32448688-32448750)
chr2 (498-575)||(6358929-6359006)
chr2 (441-569)||(7015740-7015869)
chr2 (457-569)||(9986371-9986488)
chr2 (433-494)||(21570514-21570575)
chr2 (433-494)||(27249257-27249318)
chr2 (433-494)||(32680688-32680749)
chr2 (433-494)||(36233919-36233980)
chr2 (433-569)||(27477069-27477200)
chr2 (502-574)||(34128741-34128813)
chr2 (442-478)||(41712887-41712923)
chr2 (498-585)||(37994246-37994333)
chr2 (523-581)||(37416702-37416760)
chr2 (499-571)||(42698761-42698829)
chr2 (499-552)||(7677949-7678002)
chr2 (499-598)||(11985263-11985359)
chr2 (499-552)||(18763439-18763492)
chr2 (462-557)||(19953631-19953728)
chr2 (500-561)||(20145797-20145858)
chr2 (499-552)||(36943197-36943250)
chr2 (536-573)||(37614150-37614187)
chr2 (441-494)||(42949637-42949690)
chr2 (442-494)||(22421659-22421711)
chr2 (500-552)||(31210683-31210735)
[»] chr8 (30 HSPs)
chr8 (433-567)||(34611721-34611857)
chr8 (433-569)||(35580375-35580512)
chr8 (442-598)||(43192346-43192503)
chr8 (433-573)||(28239750-28239892)
chr8 (498-561)||(41896472-41896535)
chr8 (433-569)||(11196809-11196944)
chr8 (433-509)||(16794210-16794287)
chr8 (433-569)||(42448056-42448195)
chr8 (433-569)||(4808881-4809019)
chr8 (498-561)||(18890770-18890833)
chr8 (490-561)||(20227347-20227418)
chr8 (498-561)||(39657409-39657472)
chr8 (433-561)||(14906960-14907091)
chr8 (493-590)||(24099293-24099390)
chr8 (513-572)||(5333403-5333462)
chr8 (499-561)||(1236763-1236825)
chr8 (499-561)||(1239463-1239525)
chr8 (500-590)||(8443549-8443639)
chr8 (433-494)||(2655786-2655847)
chr8 (433-494)||(9072634-9072695)
chr8 (433-572)||(15597193-15597334)
chr8 (433-494)||(33895998-33896059)
chr8 (442-494)||(32724595-32724647)
chr8 (500-555)||(14585663-14585718)
chr8 (523-573)||(29617329-29617379)
chr8 (500-570)||(36033365-36033435)
chr8 (499-545)||(40619153-40619199)
chr8 (433-478)||(9619480-9619525)
chr8 (436-570)||(17427244-17427382)
chr8 (498-557)||(5917698-5917758)
[»] chr6 (40 HSPs)
chr6 (435-561)||(8196444-8196572)
chr6 (449-573)||(25337496-25337622)
chr6 (499-574)||(34185749-34185824)
chr6 (499-573)||(26588529-26588603)
chr6 (433-569)||(4468469-4468606)
chr6 (433-561)||(23947355-23947484)
chr6 (498-590)||(528390-528482)
chr6 (457-561)||(25398500-25398603)
chr6 (498-562)||(30776626-30776690)
chr6 (498-561)||(545984-546047)
chr6 (433-561)||(33740615-33740745)
chr6 (433-494)||(12652850-12652911)
chr6 (433-561)||(25064145-25064276)
chr6 (498-574)||(7976233-7976309)
chr6 (498-562)||(14801781-14801845)
chr6 (513-585)||(31296793-31296865)
chr6 (498-561)||(1523362-1523425)
chr6 (432-562)||(7881138-7881271)
chr6 (498-561)||(8102680-8102743)
chr6 (433-569)||(8496875-8497015)
chr6 (513-572)||(22571447-22571506)
chr6 (498-561)||(30493490-30493553)
chr6 (435-573)||(33543645-33543784)
chr6 (434-561)||(8028155-8028284)
chr6 (433-494)||(7876151-7876212)
chr6 (433-566)||(28635153-28635289)
chr6 (433-494)||(33109744-33109805)
chr6 (439-487)||(13436703-13436751)
chr6 (433-585)||(10228589-10228743)
chr6 (433-557)||(16419068-16419194)
chr6 (499-562)||(28981136-28981199)
chr6 (535-569)||(17334792-17334826)
chr6 (461-561)||(34489188-34489290)
chr6 (433-494)||(17237390-17237451)
chr6 (499-552)||(23128580-23128633)
chr6 (499-552)||(32059871-32059924)
chr6 (499-552)||(32327292-32327345)
chr6 (499-552)||(33053243-33053296)
chr6 (442-478)||(4984700-4984736)
chr6 (499-543)||(31852272-31852316)
[»] scaffold0888 (1 HSPs)
scaffold0888 (457-561)||(1751-1855)
[»] chr3 (52 HSPs)
chr3 (498-574)||(29239299-29239375)
chr3 (498-574)||(41818168-41818244)
chr3 (433-566)||(22802929-22803064)
chr3 (433-569)||(29503370-29503507)
chr3 (433-569)||(42719428-42719562)
chr3 (457-561)||(51303716-51303820)
chr3 (498-561)||(7546566-7546629)
chr3 (498-561)||(16235378-16235441)
chr3 (433-494)||(4178472-4178533)
chr3 (457-562)||(51923638-51923743)
chr3 (498-574)||(12947330-12947406)
chr3 (433-487)||(21488019-21488073)
chr3 (433-494)||(4172474-4172535)
chr3 (433-559)||(17237710-17237840)
chr3 (431-585)||(36906027-36906183)
chr3 (433-494)||(39917502-39917563)
chr3 (433-505)||(54378808-54378881)
chr3 (498-562)||(8914664-8914728)
chr3 (498-598)||(32246403-32246503)
chr3 (490-556)||(4019685-4019752)
chr3 (499-562)||(21289886-21289949)
chr3 (433-561)||(25162344-25162473)
chr3 (498-561)||(27706299-27706362)
chr3 (498-561)||(51487062-51487125)
chr3 (433-487)||(2342399-2342453)
chr3 (523-573)||(4396391-4396441)
chr3 (433-494)||(3850561-3850622)
chr3 (441-494)||(25631633-25631686)
chr3 (433-494)||(35499307-35499368)
chr3 (441-494)||(38440683-38440736)
chr3 (433-494)||(38855143-38855204)
chr3 (433-561)||(46934550-46934679)
chr3 (525-569)||(36734721-36734765)
chr3 (443-545)||(30829892-30829995)
chr3 (531-561)||(21488098-21488128)
chr3 (508-574)||(25842642-25842708)
chr3 (531-561)||(51202291-51202321)
chr3 (499-561)||(53807926-53807988)
chr3 (499-552)||(9998427-9998480)
chr3 (499-552)||(10108196-10108249)
chr3 (499-552)||(10233030-10233083)
chr3 (498-571)||(25461060-25461133)
chr3 (433-494)||(32607375-32607436)
chr3 (499-552)||(36461506-36461559)
chr3 (499-552)||(38545759-38545812)
chr3 (499-552)||(40487285-40487338)
chr3 (499-552)||(40556672-40556725)
chr3 (433-494)||(44907505-44907566)
chr3 (499-552)||(47042124-47042177)
chr3 (433-494)||(50611523-50611584)
chr3 (435-487)||(14464417-14464469)
chr3 (531-567)||(24396545-24396581)
[»] chr1 (50 HSPs)
chr1 (433-561)||(28035053-28035183)
chr1 (441-585)||(34519055-34519200)
chr1 (433-569)||(51871778-51871915)
chr1 (457-561)||(48750100-48750204)
chr1 (498-561)||(16161794-16161857)
chr1 (433-573)||(18569335-18569477)
chr1 (435-561)||(45426103-45426227)
chr1 (433-569)||(51868674-51868812)
chr1 (433-569)||(27872653-27872790)
chr1 (433-494)||(30818451-30818512)
chr1 (435-561)||(3871325-3871452)
chr1 (433-484)||(5324673-5324724)
chr1 (498-561)||(32679164-32679227)
chr1 (516-590)||(12635148-12635222)
chr1 (463-573)||(4396914-4397026)
chr1 (433-494)||(20266216-20266277)
chr1 (433-509)||(38520623-38520700)
chr1 (433-560)||(14545434-14545562)
chr1 (447-574)||(5855833-5855959)
chr1 (498-573)||(31692523-31692598)
chr1 (498-561)||(34413163-34413226)
chr1 (498-573)||(47132863-47132938)
chr1 (499-561)||(19060871-19060933)
chr1 (433-567)||(19723247-19723383)
chr1 (433-487)||(30878989-30879043)
chr1 (499-561)||(49626875-49626937)
chr1 (431-561)||(7997699-7997833)
chr1 (433-494)||(9172402-9172463)
chr1 (433-494)||(9180384-9180445)
chr1 (433-494)||(25406390-25406451)
chr1 (433-494)||(25728065-25728126)
chr1 (433-494)||(35584727-35584788)
chr1 (433-494)||(40646602-40646663)
chr1 (433-494)||(40881119-40881180)
chr1 (433-494)||(50148286-50148347)
chr1 (441-598)||(50166099-50166258)
chr1 (433-561)||(5701171-5701303)
chr1 (458-561)||(24582872-24582974)
chr1 (498-561)||(36775783-36775846)
chr1 (499-590)||(41994388-41994479)
chr1 (432-487)||(45805922-45805977)
chr1 (433-506)||(7312191-7312265)
chr1 (433-475)||(9919303-9919345)
chr1 (452-573)||(15397336-15397458)
chr1 (535-569)||(35584647-35584681)
chr1 (499-561)||(44543234-44543296)
chr1 (499-552)||(7836871-7836924)
chr1 (445-561)||(11453862-11453979)
chr1 (433-478)||(19716019-19716064)
chr1 (525-573)||(39927579-39927627)
[»] scaffold0014 (1 HSPs)
scaffold0014 (441-585)||(201385-201530)
[»] scaffold0002 (1 HSPs)
scaffold0002 (441-573)||(453851-453984)
[»] scaffold0372 (1 HSPs)
scaffold0372 (441-559)||(9659-9779)
[»] scaffold0146 (1 HSPs)
scaffold0146 (433-559)||(16359-16489)
[»] scaffold0347 (1 HSPs)
scaffold0347 (499-590)||(5988-6079)
[»] scaffold0039 (1 HSPs)
scaffold0039 (500-559)||(93065-93124)
[»] scaffold0495 (1 HSPs)
scaffold0495 (433-585)||(5308-5462)
[»] scaffold0311 (1 HSPs)
scaffold0311 (435-494)||(8632-8691)


Alignment Details
Target: chr5 (Bit Score: 600; Significance: 0; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 600; E-Value: 0
Query Start/End: Original strand, 1 - 672
Target Start/End: Complemental strand, 1582719 - 1582058
Alignment:
Q  1 tttgatgatgtgtcatttttaacgagccttaatttttatgccaaagagcaaagaagatctaagtatataatggatggttatgcagaagaaactcatacca 100  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1582719 tttgatgatgtgtcatttttaacgagccttcaatttt-tgccaaagaccaaagaagatctaagtatataatggatggttatgcagaagaaactcatacca 1582621  T
Q  101 tgacactctacaaaataggataaaccccatatatggataaagtcactcactattgcatataagcatgatacattatcatcatttggatatatttataata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1582620 tgacactctacaaaataggataaaccccatatatggataaagtcactcactattgcatataagcatgatacattatcatcatttggatatatttataata 1582521  T
Q  201 gaagaaaaaatttcatttcactatttgtaaattttaaccaagcctcttatccgttttcctttttggacaaagaagcaaaaactttcaagcaaagtaaata 300  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1582520 gaagaaaatatttcatttcactatttgtaaattttaaccaagcctattatccgttttcctttttggacaaagaagcaaaaactttcaagcaaagtaaata 1582421  T
Q  301 aattatccggggtgaaacaacatttaacaaatgagtgcgaattttcgaccaaacatccccctcttgtaatgaaatgtaatgttgatgcgaattttcatac 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1582420 aattatccggggtgaaacaacatttaacaaatgagtgcgaattttcgaccaaacatccccctcttgtaatgaaatgtaatgttgatgcgaattttcatac 1582321  T
Q  401 cgacctattgccaaatttactaaagagtagcttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1582320 cgacctattgccaaatttactaaagagtagcttcttcatatttttctctccattttaatctaaataagtgattttcacgtagatctagctttttctacgt 1582221  T
Q  501 gatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaatg 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |         ||||||||||||||    
T  1582220 gatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtaat---------gttccttttgaatg 1582130  T
Q  601 accctcactttgatttacatagtctcttcttagctatgatgatggtgatgatttatttaagaaatagctttg 672  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1582129 accctcactttgatttacatagtctcttcttagctatgatgatgatgatgatttatttaagaaatagctttg 1582058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 600; E-Value: 0
Query Start/End: Original strand, 1 - 672
Target Start/End: Original strand, 1602096 - 1602757
Alignment:
Q  1 tttgatgatgtgtcatttttaacgagccttaatttttatgccaaagagcaaagaagatctaagtatataatggatggttatgcagaagaaactcatacca 100  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1602096 tttgatgatgtgtcatttttaacgagccttcaatttt-tgccaaagaccaaagaagatctaagtatataatggatggttatgcagaagaaactcatacca 1602194  T
Q  101 tgacactctacaaaataggataaaccccatatatggataaagtcactcactattgcatataagcatgatacattatcatcatttggatatatttataata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1602195 tgacactctacaaaataggataaaccccatatatggataaagtcactcactattgcatataagcatgatacattatcatcatttggatatatttataata 1602294  T
Q  201 gaagaaaaaatttcatttcactatttgtaaattttaaccaagcctcttatccgttttcctttttggacaaagaagcaaaaactttcaagcaaagtaaata 300  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1602295 gaagaaaatatttcatttcactatttgtaaattttaaccaagcctattatccgttttcctttttggacaaagaagcaaaaactttcaagcaaagtaaata 1602394  T
Q  301 aattatccggggtgaaacaacatttaacaaatgagtgcgaattttcgaccaaacatccccctcttgtaatgaaatgtaatgttgatgcgaattttcatac 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1602395 aattatccggggtgaaacaacatttaacaaatgagtgcgaattttcgaccaaacatccccctcttgtaatgaaatgtaatgttgatgcgaattttcatac 1602494  T
Q  401 cgacctattgccaaatttactaaagagtagcttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1602495 cgacctattgccaaatttactaaagagtagcttcttcatatttttctctccattttaatctaaataagtgattttcacgtagatctagctttttctacgt 1602594  T
Q  501 gatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaatg 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |         ||||||||||||||    
T  1602595 gatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtaat---------gttccttttgaatg 1602685  T
Q  601 accctcactttgatttacatagtctcttcttagctatgatgatggtgatgatttatttaagaaatagctttg 672  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1602686 accctcactttgatttacatagtctcttcttagctatgatgatgatgatgatttatttaagaaatagctttg 1602757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 62 - 257
Target Start/End: Original strand, 8546113 - 8546308
Alignment:
Q  62 agtatataatggatggttatgcagaagaaactcataccatgacactctacaaaataggataaaccccatatatggataaagtcactcactattgcatata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||| |    
T  8546113 agtatataatggatggttatgcagaagaaactcataccatgacacactacaaaataggataagccccataaatggataaagtcactcattattgcataaa 8546212  T
Q  162 agcatgatacattatcatcatttggatatatttataatagaagaaaaaatttcatttcactatttgtaaattttaaccaagcctcttatccgtttt 257  Q
    ||||| ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  8546213 agcataatacactatcattatttggatatctttataatagaagaaaaaatttcatttcactatttgtaaattttaaccatgcctcttattcgtttt 8546308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 62 - 241
Target Start/End: Complemental strand, 8532595 - 8532417
Alignment:
Q  62 agtatataatggatggttatgcagaagaaactcataccatgacactctacaaaataggataaaccccatatatggataaagtcactcactattgcatata 161  Q
    |||||||||||||||||||| |||||| || ||||||||||||||| ||||||  |||| |||||||||| ||||||||| || |||||||||||||  |    
T  8532595 agtatataatggatggttattcagaagtaattcataccatgacactttacaaataaggacaaaccccataaatggataaaatcgctcactattgcatcaa 8532496  T
Q  162 agcatgatacattatcatcatttggatatatttataatagaagaaaaaatttcatttcactatttgtaaattttaaccaa 241  Q
    | ||| | | | |||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  8532495 aacataacatagtatcattatttggatat-tttattatagaagaaaaaatttcatttcactatttctaaaatttaaccaa 8532417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 432 - 585
Target Start/End: Original strand, 42886391 - 42886544
Alignment:
Q  432 ttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||||  ||||||||| |||| |||| ||||||||| ||||||| || || ||| ||||||| |||||||||||| | |||||| |  | ||||| |    
T  42886391 ttcttcatccttttctctctatttcaatcaaaataagtgcttttcacatagatttaggtttttcttcgtgatttcatcatctgagtgtggtggtgtgttg 42886490  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    || |||||||||||||||||||||||||||  || ||||||| | |||||||||    
T  42886491 ttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcattt 42886544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 14211138 - 14211242
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||||||||||||||||||||| || ||| || ||||  | ||||||||| |||| | |||||||| |||||| ||| ||||||||||||||||||||||    
T  14211138 aatctaaataagtgattttcacatacatcaagtttttatttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgttt 14211237  T
Q  557 gattt 561  Q
    |||||    
T  14211238 gattt 14211242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 16981203 - 16981340
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||| || ||||| | |||||||  ||||||||||| | | ||||||  | | ||| |    
T  16981203 tcttcatatttttctctctatttcaatctaaataagtgatttacacatatatctaggttttttctttgtgatttcatcatctaagtgcggtggtttgttg 16981302  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || ||||||||||||||| |||||| ||||| ||||||    
T  16981303 ttcgtcgtcttgtgcggcattgtttaattttccgtctt 16981340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 28541042 - 28540979
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  28541042 cgtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 28540979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 433 - 562
Target Start/End: Original strand, 28235498 - 28235628
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| ||||||| || ||||  ||||||||||||||||||||| || ||||||  |||||||  ||||||||||| | | |||| || | | ||| |    
T  28235498 tcttcatctttttctttctatttcgatctaaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttg 28235597  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    | |||||||||||||||||||||||||||||    
T  28235598 tctgtcgtcttgtgcggcgttgtttgatttt 28235628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 18677633 - 18677494
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||    |||||||  ||||||||||| | | |||| |  | | |||    
T  18677633 tcttcatctttttctctctattttaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgt 18677534  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
     ||| ||||||||||| | |||||||||||||| ||||||    
T  18677533 tgttcgtcgtcttgtgggacgttgtttgattttccgtctt 18677494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 573
Target Start/End: Complemental strand, 10332680 - 10332605
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||||||  ||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||    
T  10332680 cgtgattttgtcgcatgagtacgacgttgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttg 10332605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 19103603 - 19103540
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  19103603 cgtgatttcgtcgtcttagtgcgacgttgtgttgttagtcgtcttgtgcggcgttgtttgattt 19103540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 9000851 - 9000789
Alignment:
Q  62 agtatataatggatggttatgcagaagaaactcataccatgacactctacaaaataggataaa 124  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||| ||| |||||||||    
T  9000851 agtatataatggatggttatacagaagaaactcataccagggcactctagaaagtaggataaa 9000789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 27267027 - 27266966
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  27267027 tcttcatatttttctctctatttcaatctaaataagtgattttcacatagatctaggttttt 27266966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 43261984 - 43261848
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 532  Q
    ||||||| ||||| |||| |||| |||||||||||||||||||||| || |||||| |||| ||  ||||||| ||| | | |||| |  | | ||| ||    
T  43261984 tcttcatctttttatctctatttcaatctaaataagtgattttcacatagatctaggttttcctttgtgattttatcatctaagtgtggtggtttgttgt 43261885  T
Q  533 ttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    | |||||||| ||||| ||||||||||||| ||||||    
T  43261884 tcgtcgtcttatgcggtgttgtttgattttccgtctt 43261848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 488
Target Start/End: Original strand, 10148711 - 10148766
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag 488  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| || ||||||    
T  10148711 tcttcatatttttcttcccattttaatctaaataagtgattttcacatagatctag 10148766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 498 - 556
Target Start/End: Complemental strand, 2979442 - 2979384
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    ||||||||| |||| | ||||||||||||||| ||| ||||||||||||||||||||||    
T  2979442 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgttt 2979384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 598
Target Start/End: Complemental strand, 19281111 - 19280945
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| ||||||||||||||| ||||||  | ||||| | |||||||  ||||||||||| | | |||| |  | | ||| |    
T  19281111 tcttcatctttttctctctatttcaatctaaataagtgactttcacacatatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 19281012  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    || |||||||||||| |||||||||| |||| | |||| ||| | |||||||||  ||||| |||||    
T  19281011 ttcgtcgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcattttattcctattgaa 19280945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 585
Target Start/End: Complemental strand, 19983454 - 19983368
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    |||||||| || |||||||| | || ||||| ||| |||| |||||||||||||||| | ||||||||||||||||  |||||||||    
T  19983454 gtgatttcgtcatatgagtgtggcgctgtgttgttcgtcgccttgtgcggcgttgttagttttttcgtcttgttgtggtgttcattt 19983368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 569
Target Start/End: Original strand, 28097074 - 28097203
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctagctt--tttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgt 539  Q
    ||||| ||| |||| ||| |||||||||||||||||| ||||| ||| ||  ||||| | ||||||| | ||||||||   | ||||||| | |||||||    
T  28097074 ttttcgctcaatttcaatataaataagtgattttcacataaatttaggttattttcttcatgatttcgttgtatgagtataatgttgtgttggttgtcgt 28097173  T
Q  540 cttgtgcggcgttgtttgatttttcgtctt 569  Q
     |||||||| |||||||||||| |||||||    
T  28097174 tttgtgcggtgttgtttgatttctcgtctt 28097203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 442 - 569
Target Start/End: Original strand, 30298130 - 30298258
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtc 540  Q
    ||||||||  |||| |||||||||||||||||||||| || ||||| | |||||||   |||||||||| | | |||| |  | | ||| ||| ||||||    
T  30298130 ttttctctatatttcaatctaaataagtgattttcacatagatctaggttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 30298229  T
Q  541 ttgtgcggcgttgtttgatttttcgtctt 569  Q
    |||||||||| ||||||||||| ||||||    
T  30298230 ttgtgcggcgctgtttgattttccgtctt 30298258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 2058005 - 2057875
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||   |||||||   |||||||||| | | |||| |  | | |||     
T  2058005 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttctttatgatttcatcatctaagtgtggtggtttgtt 2057906  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||| ||||||||| |||||||||||||||||    
T  2057905 gttcgtcgtcttgcgcggcgttgtttgattt 2057875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 573
Target Start/End: Complemental strand, 7613214 - 7613083
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtct 541  Q
    |||||||||  ||| |||||||||||||| ||||||  || |||||| ||||||| | ||||||  || | |||||| |  | ||||| ||| |||||||    
T  7613214 ttttctctctgtttcaatctaaataagtgtttttcatatagatctaggtttttcttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgtct 7613115  T
Q  542 tgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    |||||   |||||||||||| |||||||||||    
T  7613114 tgtgcaatgttgtttgatttctcgtcttgttg 7613083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 523 - 598
Target Start/End: Complemental strand, 38111055 - 38110980
Alignment:
Q  523 gttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    ||||||| |||||| |||||||||||||||||||||||||  ||||||||| | ||||  ||| |||||| |||||    
T  38111055 gttgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttcctattgaa 38110980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 39567254 - 39567317
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||| || |||| | ||||||||||||||| ||| || ||||||||||||||||||||||||    
T  39567254 cgtgatctcgtcgtcttagtgcgacgttgtgttgttcgttgtcttgtgcggcgttgtttgattt 39567317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 552
Target Start/End: Original strand, 7246871 - 7246992
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||||| |||||  ||  ||||||||||| | | |||| |  | | |||     
T  7246871 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtgatttgtt 7246970  T
Q  531 gtttgtcgtcttgtgcggcgtt 552  Q
    ||| ||||||||||||||||||    
T  7246971 gttcgtcgtcttgtgcggcgtt 7246992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 487
Target Start/End: Complemental strand, 7887096 - 7887050
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatcta 487  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  7887096 ttttcctctctattttaatctaaataagtgattttcacataaatcta 7887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 561
Target Start/End: Complemental strand, 8088326 - 8088280
Alignment:
Q  515 agtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||    
T  8088326 agtgcgaccttgtgttgtttatcgtcttgtgcggcgttgtttgattt 8088280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 7241695 - 7241756
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||||| |||||    
T  7241695 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttt 7241756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 10649366 - 10649427
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  10649366 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 10649427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 494
Target Start/End: Complemental strand, 20257853 - 20257800
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  20257853 tttttctctctatttcaatctaaataagtgattttcacatagatctaggttttt 20257800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 26578162 - 26578223
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  26578162 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 26578223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 30371637 - 30371698
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  30371637 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 30371698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 34881631 - 34881683
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  34881631 ttttctctctatttcaatctaaataagtgattttcacatagatctagtttttt 34881683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 557
Target Start/End: Complemental strand, 7150502 - 7150376
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta--gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||||    |||||||  ||| ||||||| | | |||| |  | | |||     
T  7150502 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaagtttttttctttgtgctttcatcatctaagtgtggtggtttgtt 7150403  T
Q  531 gtttgtcgtcttgtgcggcgttgtttg 557  Q
    ||| |||||||||||||||||||||||    
T  7150402 gttcgtcgtcttgtgcggcgttgtttg 7150376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 583
Target Start/End: Complemental strand, 21060448 - 21060297
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || || || | ||||||| |||||| ||||| | | |||| |  | | ||| |    
T  21060448 tcttcatctttttctctatatttcaatctaaataagtgattttcacatagatgtaggttttttcttcgtgatgtcatcatctaagtgtggtggtttgttg 21060349  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcat 583  Q
    || |||||||||||||||  | ||||||||  |||||| ||| | |||||||    
T  21060348 ttcgtcgtcttgtgcggcactttttgatttcccgtcttcttgcagtgttcat 21060297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 573
Target Start/End: Complemental strand, 27576518 - 27576375
Alignment:
Q  431 cttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    |||||||||  ||||||||| |||| ||| |||||||||||| ||||| || ||||||  |||||||  |||||||| || |||||||| |  | | |||    
T  27576518 cttcttcatccttttctctctatttcaatgtaaataagtgatattcacatagatctagattttttctttgtgatttcgtcatatgagtgtggtggtatgt 27576419  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
     |||  ||  |||||||| |||||||||||||  ||||||||||    
T  27576418 tgttcttctacttgtgcgacgttgtttgatttcccgtcttgttg 27576375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 598
Target Start/End: Original strand, 19349679 - 19349753
Alignment:
Q  524 ttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    |||||| ||| |||||||||||||||||| ||||||||  ||||| |||| | ||||| ||| |||||| |||||    
T  19349679 ttgtgttgttcgtcgtcttgtgcggcgttatttgatttcacgtctagttgcaatgttcgtttggttcctattgaa 19349753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 781302 - 781379
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatc 509  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||  || ||||| | |||||||  |||||||||||    
T  781302 tcttcatctttttctctatatttcaatctaaataagtgattttcagatagatctagggtttttctttgtgatttcatc 781379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 543
Target Start/End: Original strand, 3662786 - 3662874
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatcta--gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttg 543  Q
    ||||||||||| |||||||||| |  |||||  | ||||||| |||||||||||||| ||| |||||  |||||| ||| |||||||||    
T  3662786 aatctaaataattgattttcacatggatctaaagttttttcttcgtgatttcatcgtttgaatgcgatattgtgttgttcgtcgtcttg 3662874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 6012266 - 6012213
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    ||||||||||||| | ||||||  ||||||| ||| ||||||||||||||||||    
T  6012266 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 6012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 13007189 - 13007242
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  13007189 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 13007242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 573
Target Start/End: Original strand, 19120879 - 19120944
Alignment:
Q  508 tcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    |||||| |||||| |||||||| ||| |||||||| || ||| |||||||||||  ||||||||||    
T  19120879 tcgtataagtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttg 19120944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 35850759 - 35850812
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | ||| ||||||||||| ||| ||||||||||||||||||    
T  35850759 gtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtt 35850812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 38597757 - 38597810
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  38597757 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 38597810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 5e-24; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 8009527 - 8009398
Alignment:
Q  432 ttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||| || |||||| |||||||  ||||||||||| | | |||| |  | | ||| |    
T  8009527 ttcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagttttttctttgtgatttcatcatctaagtgtggtggtttgttg 8009428  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || |||||||||||||||||||||||||||    
T  8009427 ttcgtcgtcttgtgcggcgttgtttgattt 8009398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 27651876 - 27651980
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||||||||||||||||||||| || ||| || ||||  | ||||||||| |||| | ||||| ||||||||| ||| |||||||||||||| |||||||    
T  27651876 aatctaaataagtgattttcacatacatcaagtttttctttcgtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgttt 27651975  T
Q  557 gattt 561  Q
    |||||    
T  27651976 gattt 27651980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 561
Target Start/End: Original strand, 36194645 - 36194745
Alignment:
Q  461 taaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatt 560  Q
    |||||||||||||||||| || ||| || ||||  | ||||||||| | || | ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  36194645 taaataagtgattttcacatacatcaagtttttctttcgtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatt 36194744  T
Q  561 t 561  Q
    |    
T  36194745 t 36194745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 37188759 - 37188631
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 532  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||||  ||||||||||| | | |||| |  | | ||| ||    
T  37188759 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagttttttctttgtgatttcatcatttaagtgtggtggtttgttgt 37188660  T
Q  533 ttgtcgtcttgtgcggcgttgtttgattt 561  Q
    | ||||| |||||||||| ||||||||||    
T  37188659 tcgtcgttttgtgcggcgctgtttgattt 37188631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 22300826 - 22300889
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| || |||||||||||||| ||| |||||||||||||||||||||||||||    
T  22300826 cgtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 22300889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 585
Target Start/End: Complemental strand, 18139080 - 18138926
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgatttt-cacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    |||||||  ||||||||| |||| ||||||||||||||||||| ||| || |||||| ||||| ||   ||||||| ||   |||||| |  | |||||     
T  18139080 tcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgtt 18138981  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    ||| |||||||||||||||||||||||||||| | |||||||| | |||||||||    
T  18138980 gttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcattt 18138926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 568
Target Start/End: Original strand, 43444315 - 43444452
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||   |||||||  || |||||||| | | |||| |  | | |||     
T  43444315 tcttcatctttttctctttatttcaatctaaataagtgattttcacatatatctaggtttttttctttgtaatttcatcatctaagtgtggtgatttgtt 43444414  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtct 568  Q
    ||| |||||||||||||||||||||||||||| |||||    
T  43444415 gttcgtcgtcttgtgcggcgttgtttgattttccgtct 43444452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 585
Target Start/End: Complemental strand, 49126293 - 49126139
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgatttt-cacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    |||||||  ||||||||| |||| ||||||||||||||||||| ||| || |||||| ||||| ||   ||||||| ||   |||||| |  | |||||     
T  49126293 tcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgtt 49126194  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    ||| |||||||||||||||||||||||||||| | |||||||| | |||||||||    
T  49126193 gttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcattt 49126139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 452 - 561
Target Start/End: Original strand, 868105 - 868214
Alignment:
Q  452 attttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgt 551  Q
    |||| ||||||||||||| |||||||| || |||||| |||||||  ||||||||||| | | |||| |  | | ||| ||| |||||||||||||||||    
T  868105 atttcaatctaaataagttattttcacatagatctagatttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 868204  T
Q  552 tgtttgattt 561  Q
    ||||||||||    
T  868205 tgtttgattt 868214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 2624439 - 2624560
Alignment:
Q  452 attttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggc 549  Q
    |||| |||||||||||||||||||||| || |||||| |||||  || ||||||||| ||  ||||||| |  | ||||| ||| |||||||||||||||    
T  2624439 atttcaatctaaataagtgattttcacatagatctaggtttttttcttcgtgatttcgtc--atgagtgtggtggtgtgttgttcgtcgtcttgtgcggc 2624536  T
Q  550 gttgtttgatttttcgtcttgttg 573  Q
    || |||||||||  ||||||||||    
T  2624537 gtagtttgatttcccgtcttgttg 2624560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 567
Target Start/End: Complemental strand, 9645716 - 9645580
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| ||||| |||| |||| ||||||||||||||| |||||| || |||||| |||||  ||  | ||||||||| | | |||| |  | |||||     
T  9645716 tcttcatctttttgtctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgcgatttcatcatctaagtgtggtggtgtgtt 9645617  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtc 567  Q
    ||| |||||||||||||||||||||||||||| ||||    
T  9645616 gttcgtcgtcttgtgcggcgttgtttgattttccgtc 9645580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 10389920 - 10389783
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || ||||| | ||||||    |||||||||| | | |||| |  | | ||| |    
T  10389920 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttttccttttgatttcatcatctaagtgtggtggtttgttg 10389821  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || |||||||||||||||||||||||||||| ||||||    
T  10389820 ttcgtcgtcttgtgcggcgttgtttgattttccgtctt 10389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 569
Target Start/End: Original strand, 35261138 - 35261251
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtt 555  Q
    |||||||||||||||||||||| || || ||| ||||| || |||||||| ||| | | |||| |  | ||||| |||||||||||| ||||||||||||    
T  35261138 aatctaaataagtgattttcacatagatttaggttttttcttcgtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgttgtt 35261237  T
Q  556 tgatttttcgtctt 569  Q
    ||||||| ||||||    
T  35261238 tgattttccgtctt 35261251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 51317908 - 51318037
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || ||||| | |||||||   |||||||||| | | |||| |  | | ||| |    
T  51317908 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtgatttgttg 51318007  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || ||||||||||||||| |||||||||||    
T  51318008 ttcgtcgtcttgtgcggcattgtttgattt 51318037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 441 - 559
Target Start/End: Complemental strand, 21365255 - 21365135
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtc 537  Q
    ||||||||||||||||||| |||||||||| |||| || || ||||||    ||||||| ||||||||| |||| | | |||| ||||||   |||||||    
T  21365255 tttttctctccattttaatataaataagtggttttgacatatatctagattttttttcttcgtgatttcgtcgtctaaatgcgtcgttgttgtgtttgtc 21365156  T
Q  538 gtcttgtgcggcgttgtttgat 559  Q
    || |||||||||||||||||||    
T  21365155 gt-ttgtgcggcgttgtttgat 21365135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 573
Target Start/End: Original strand, 52944288 - 52944363
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||||||| | || |||||||| |||||||| ||| ||||| |||||||||||||||| ||||| ||||||||||    
T  52944288 cgtgatttcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttg 52944363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 569
Target Start/End: Complemental strand, 31381835 - 31381701
Alignment:
Q  436 tcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgttt 534  Q
    |||| ||||||||||  ||| ||| |||||||||||||||||| || ||||| | |||||||  ||||||||||| | | |||| |  | | ||| |||     
T  31381835 tcatctttttctctctttttcaatttaaataagtgattttcacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 31381736  T
Q  535 gtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    |||||||||||| ||||||||||||||| ||||||    
T  31381735 gtcgtcttgtgcagcgttgtttgattttccgtctt 31381701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 441 - 494
Target Start/End: Original strand, 1008225 - 1008278
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||    
T  1008225 tttttctctctattttaatctaaataagtgattttcacataaatttagtttttt 1008278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 4643780 - 4643910
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || ||||||    |||||||  ||||||||||| | | |||| |  | | |||    
T  4643780 tcttcatctttttctctctatttcaatctaaataagtga-tttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgt 4643878  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
     ||| |||||||||||||||||||||||||||    
T  4643879 tgttcgtcgtcttgtgcggcgttgtttgattt 4643910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 560
Target Start/End: Original strand, 28857380 - 28857441
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatt 560  Q
    ||||||||||||| | |||||| |||||||| ||| || |||||||||||||||||||||||    
T  28857380 gtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgatt 28857441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 561
Target Start/End: Complemental strand, 38706879 - 38706747
Alignment:
Q  431 cttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtg 528  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||| || || |||   |||||||  ||||||||||| | | |||| |  | | ||    
T  38706879 cttcttcatctttttctctctatttcaatctaaataagtgattttcacatagatttaggtttttttctttgtgatttcatcatctaagtgtggtggtttg 38706780  T
Q  529 tcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    | ||| |||||||||||| ||||||||| ||||    
T  38706779 ttgttcgtcgtcttgtgcagcgttgtttcattt 38706747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 590
Target Start/End: Original strand, 9643381 - 9643457
Alignment:
Q  514 gagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttc 590  Q
    |||||||||||||||| ||| ||||||||| ||| ||||||||||||| || |||||||| | ||||| ||| ||||    
T  9643381 gagtgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttc 9643457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 434 - 585
Target Start/End: Complemental strand, 10359712 - 10359560
Alignment:
Q  434 cttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 532  Q
    |||||| |||||||||| ||||  |||||||||||||||||| || || ||||| | ||||||| |||||||||||| | | |||| |  | | ||| ||    
T  10359712 cttcatctttttctctctatttcgatctaaataagtgattttaacatatatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgt 10359613  T
Q  533 ttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    | | |||||| ||||| ||||||||||||  |||||| ||||  |||||||||    
T  10359612 tcgccgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttcattt 10359560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 561
Target Start/End: Original strand, 18935710 - 18935818
Alignment:
Q  453 ttttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    ||||||||||||| |||||||||||| || ||| || ||||  | ||||||||| |||| | | |  |||||||||  ||| |||||||||||| |||||    
T  18935710 ttttaatctaaattagtgattttcacatacatcaagtttttcgttcgtgatttcgtcgtcttaatttgacgttgtgctgttcgtcgtcttgtgcagcgtt 18935809  T
Q  553 gtttgattt 561  Q
    |||||||||    
T  18935810 gtttgattt 18935818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 442 - 561
Target Start/End: Original strand, 25273811 - 25273935
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctag-----ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgt 536  Q
    ||||||||| |||| |||||||||||||||||||||| || ||||||      |||||||  ||||||||||| | | |||| |  | | ||| ||| ||    
T  25273811 ttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 25273910  T
Q  537 cgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||||||||||||||    
T  25273911 cgtcttgtgcggcgttgtttgattt 25273935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 574
Target Start/End: Complemental strand, 33332703 - 33332627
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 574  Q
    ||||||||| |||| || ||||| |||||||| |||||||| |||||||| |||||||||||||  | |||||||||    
T  33332703 cgtgatttcgtcgtctgtgtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgt 33332627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 598
Target Start/End: Original strand, 56194521 - 56194690
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag----ctttttctacgtgatttcatcgtatgagtgcgacgttgtg 528  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || ||||||     |||||||  ||||||||||| | | |||| |  | | ||    
T  56194521 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggtttg 56194620  T
Q  529 tcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    | ||| ||||||||||||||||||||||| |||  |||||| |||   |||||||||  ||||| |||||    
T  56194621 ttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 56194690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 561
Target Start/End: Complemental strand, 9146014 - 9145955
Alignment:
Q  502 atttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||||| || | |||||| ||| ||||||||||||||| |||||||||||    
T  9146014 atttcatcgtatgagtacggctttgtgttgttcgtcgtcttgtgcggcattgtttgattt 9145955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 566
Target Start/End: Original strand, 12265377 - 12265511
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtga-ttttcacgtaaatctagctttt-tctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| ||||| || | |||| ||||||||||||||| ||||||| || |||||| |||| ||||||||||||  || | |||||| | || | |||     
T  12265377 tcttcatctttttatccctatttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgattttgtcatctgagtgtggcggtttgtt 12265476  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgt 566  Q
    ||| |||||| |||||||||||||||||||| ||||    
T  12265477 gttcgtcgtc-tgtgcggcgttgtttgatttctcgt 12265511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 31891423 - 31891360
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||||||||||||| ||| |||||||||||  ||||||||||||||    
T  31891423 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgattt 31891360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 573
Target Start/End: Original strand, 18048885 - 18048935
Alignment:
Q  523 gttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||||| ||||||||||||||| |||||||||||||||| || |||||||    
T  18048885 gttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttg 18048935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 566
Target Start/End: Original strand, 21090075 - 21090209
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| ||| |||||||||||||||||| || || || | ||||||| |||||||||||| | | | |  |  | | ||| |    
T  21090075 tcttcatctttttctctctatttcaatataaataagtgattttcacatagatttaggttttttcttcgtgatttcatcatctaaatatggtggtttgttg 21090174  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgt 566  Q
    || |||||||||| || ||||||||||||||||||    
T  21090175 ttcgtcgtcttgtacgacgttgtttgatttttcgt 21090209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 585
Target Start/End: Complemental strand, 35965142 - 35964988
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgatttt-cacgtaaatctagctttttcta-cgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||| ||||||||||||| ||| || |||||| ||||| |  ||||||||| || |  ||||| |  | |||||     
T  35965142 tcttcatctttttctctctatttcaatctgaataagtgatttttcacatagatctaggtttttttttcgtgatttcgtcatccgagtgtggtggtgtgtt 35965043  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    ||| |||||| |||| |||||||||||||||  |||||| ||||  |||||||||    
T  35965042 gttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcattt 35964988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 1531841 - 1531960
Alignment:
Q  445 tctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtct 541  Q
    |||||| |||| |||||||||||||||||||||| || ||||||    |||||||  ||||||||||| | | |||| |  | | ||| || ||||||||    
T  1531841 tctctctatttcaatctaaataagtgattttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgtctgtcgtct 1531940  T
Q  542 tgtgcggcgttgtttgattt 561  Q
    |||| |||||||||||||||    
T  1531941 tgtgtggcgttgtttgattt 1531960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 34024603 - 34024542
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||||||||||||| |||||||| || |||||| |||||    
T  34024603 tcttcatctttttctctctatttcaatctaaataagttattttcacatagatctaggttttt 34024542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 53616818 - 53616687
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    |||||||  ||||||||  |||| |||||||||||||||||||||| || ||||||    |||||||  || |||||||| | | |||| |  | | |||    
T  53616818 tcttcatcgttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgt 53616719  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
     ||| |||||||||||||||||||||||||||    
T  53616718 tgttcgtcgtcttgtgcggcgttgtttgattt 53616687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 561
Target Start/End: Original strand, 29965565 - 29965687
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcg 538  Q
    ||||||||  |||| |||||||||||||||||||||| || ||||||    |||||||  || |||||||| | | |||| |  | | ||| ||| ||||    
T  29965565 ttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcg 29965664  T
Q  539 tcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||||||||||||    
T  29965665 tcttgtgcggcgttgtttgattt 29965687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 43154179 - 43154127
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  43154179 ttttctctctatttcaatctaaataagtgattttcacatagatctaggttttt 43154127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 570
Target Start/End: Original strand, 21405524 - 21405575
Alignment:
Q  519 cgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttg 570  Q
    |||| |||||| ||||||||||||| ||| | ||||||||||||||||||||    
T  21405524 cgacattgtgttgtttgtcgtcttgggcgacattgtttgatttttcgtcttg 21405575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 561
Target Start/End: Complemental strand, 52934072 - 52934013
Alignment:
Q  502 atttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||| |||||||| |||||||| ||| ||| | |||||| ||||||||||||||    
T  52934072 atttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgattt 52934013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 547
Target Start/End: Complemental strand, 1621678 - 1621588
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcg 547  Q
    |||||||||||||||||||||| || ||| || ||||  | ||||||||  || | | ||||||||||||||| ||  |||||||||||||    
T  1621678 aatctaaataagtgattttcacatacatcaagtttttctttcgtgattttgtcattttagtgcgacgttgtgttgtccgtcgtcttgtgcg 1621588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 478
Target Start/End: Complemental strand, 2115756 - 2115710
Alignment:
Q  432 ttcttcatatttttctctccattttaatctaaataagtgattttcac 478  Q
    |||||||| |||||||||  |||| ||||||||||||||||||||||    
T  2115756 ttcttcatctttttctctttatttcaatctaaataagtgattttcac 2115710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 561
Target Start/End: Complemental strand, 4142883 - 4142821
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||  |||||||||    
T  4142883 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgattt 4142821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 573
Target Start/End: Original strand, 4937812 - 4937885
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    |||||||| |||| ||||| ||||||||| | || |||||| | |||||||||||||||||||| | ||||||||    
T  4937812 gtgatttcttcgtctgagtacgacgttgtcttgtatgtcgt-tagtgcggcgttgtttgattttacatcttgttg 4937885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 561
Target Start/End: Complemental strand, 47320522 - 47320460
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | |||  ||| |||||| ||| |||||||||||||||||||||||||||    
T  47320522 gtgatttcgtcgtctaagtaagaccttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 47416806 - 47416860
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta 487  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||    
T  47416806 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatcta 47416860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 572
Target Start/End: Complemental strand, 52204463 - 52204389
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgtt 572  Q
    ||||||||| || | |||||| ||||||| || ||| ||||||||||| | | |||||||||||| |||||||||    
T  52204463 cgtgatttcgtcatttgagtgtgacgttgagttgttcgtcgtcttgtgtgacattgtttgattttgcgtcttgtt 52204389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 478
Target Start/End: Original strand, 14183733 - 14183770
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcac 478  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  14183733 tttttctctctatttcaatctaaataagtgattttcac 14183770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 17949452 - 17949399
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||||||||| ||||||||||||    
T  17949452 gtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtt 17949399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 17953304 - 17953251
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||||||||| ||||||||||||    
T  17953304 gtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtt 17953251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 20569174 - 20569235
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| ||||||||||| |||||||||| || |||||| |||||    
T  20569174 tcttcatttttttctctttatttcaatctaaataaatgattttcacatagatctaggttttt 20569235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 22611164 - 22611217
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  22611164 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 22611217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 35348288 - 35348341
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  35348288 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 35348341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 35395798 - 35395741
Alignment:
Q  502 atttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgat 559  Q
    ||||| |||| |||||||| |||||||| ||| |||||||||| || |||||||||||    
T  35395798 atttcgtcgtctgagtgcggcgttgtgttgttcgtcgtcttgttcgacgttgtttgat 35395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 43510178 - 43510231
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| ||||||||  |||||||||||||||||||||    
T  43510178 gtgatttcgtcgtctaagtgcggcgttgtgttatttgtcgtcttgtgcggcgtt 43510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 598
Target Start/End: Original strand, 9048634 - 9048741
Alignment:
Q  490 tttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgtt 589  Q
    ||||||| | ||||||  |||| |||||||| |||| | | |||||||||||||||||||||||| ||||||   |||||||||   ||||| ||| |||    
T  9048634 tttttcttcatgattttttcgtctgagtgcggcgtt-tcttgtttgtcgtcttgtgcggcgttgtctgatttcgggtcttgttgcggtgttcgtttggtt 9048732  T
Q  590 ccttttgaa 598  Q
     ||||||||    
T  9048733 tcttttgaa 9048741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 547
Target Start/End: Complemental strand, 49072852 - 49072808
Alignment:
Q  503 tttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcg 547  Q
    |||| |||| ||||||||||||||||| ||| |||||||||||||    
T  49072852 tttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttgtgcg 49072808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 453 - 561
Target Start/End: Original strand, 35132857 - 35132965
Alignment:
Q  453 ttttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||||||||||||||||||||| || ||| || ||||  | ||||||||| |||| | ||||||||||||||| ||| |||||||||| |||||||    
T  35132857 ttttaatctaaataagtgattttcacatacatcaagtttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcgtt 35132956  T
Q  553 gtttgattt 561  Q
    |||||||||    
T  35132957 gtttgattt 35132965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 563
Target Start/End: Original strand, 3860890 - 3860992
Alignment:
Q  461 taaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatt 560  Q
    |||||||||||||||||| || |||| | ||||||| |||||||||||||| | ||||||||| |||||  ||||| |||||||||||||||| ||||||    
T  3860890 taaataagtgattttcacatagatcttggtttttcttcgtgatttcatcgtttaagtgcgacgctgtgttatttgttgtcttgtgcggcgttgattgatt 3860989  T
Q  561 ttt 563  Q
    |||    
T  3860990 ttt 3860992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 561
Target Start/End: Complemental strand, 1749324 - 1749220
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||||||||||||||||||||| || ||| || ||||  | ||||||||| |||| | ||||||||||||||| ||| ||||||||||||||| ||||||    
T  1749324 aatctaaataagtgattttcacatacatcaagtttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcattgttt 1749225  T
Q  557 gattt 561  Q
    |||||    
T  1749224 gattt 1749220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 433 - 566
Target Start/End: Original strand, 6001931 - 6002066
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgatttt-cacgtaaatctagctttt-tctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||| | |||||||||||||||||||||||| ||| || || ||| |||| ||||||||||||| || | |||||| | || | |||     
T  6001931 tcttcatctttttctccctattttaatctaaataagtgatttttcacatagatttaggttttctctacgtgatttcgtcatctgagtgtggcggtttgtt 6002030  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgt 566  Q
    ||| ||||||||||||||||||||||||||| ||||    
T  6002031 gttcgtcgtcttgtgcggcgttgtttgatttctcgt 6002066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 431 - 569
Target Start/End: Complemental strand, 35667400 - 35667261
Alignment:
Q  431 cttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| || ||||| | |||||||   |||||||||| | | |||| |  | | |||    
T  35667400 cttcttcatatttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgt 35667301  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
     ||| |||||||||||||||||| ||||||||| ||||||    
T  35667300 tgttcgtcgtcttgtgcggcgttttttgattttccgtctt 35667261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 433 - 566
Target Start/End: Complemental strand, 31235959 - 31235824
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtga-ttttcacgtaaatctagctttt-tctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||||||||||||| ||||||| || |||||| |||| ||||||||||||| || | | |||| | || | |||     
T  31235959 tcttcatctttttctctctatttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgatttcgtcatctaagtgtggcggtttgtt 31235860  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgt 566  Q
    ||| |||||||||||| |||||||||||||| ||||    
T  31235859 gttcgtcgtcttgtgcagcgttgtttgatttctcgt 31235824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 48930690 - 48930791
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||||||||||||||||||||| || ||| || ||||||    ||||||| |||| | |||||||||||||||  || ||||||||||||||||||||||    
T  48930690 aatctaaataagtgattttcacatacatcaagttttttca---tgatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgttgttt 48930786  T
Q  557 gattt 561  Q
    |||||    
T  48930787 gattt 48930791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 1100932 - 1100804
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 532  Q
    ||||||| |||||||||| |||| ||| | || ||||||||||  | || |||||| ||||||| |||||||||||||||||| | || || | ||| ||    
T  1100932 tcttcatctttttctctctatttcaattttaacaagtgatttttgcatatatctagttttttcttcgtgatttcatcgtatgaatccggcgatatgttgt 1100833  T
Q  533 ttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |  ||||||||||||| ||||||||||||    
T  1100832 tcatcgtcttgtgcggtgttgtttgattt 1100804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 569
Target Start/End: Complemental strand, 969587 - 969508
Alignment:
Q  490 tttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||||||| |||||||||||||| ||| || | |||||||| ||| |||||||| ||||||||||||||||||| ||||||    
T  969587 tttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtctt 969508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 28476182 - 28476245
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  28476182 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 28476245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 573
Target Start/End: Complemental strand, 38880710 - 38880635
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||| || || ||||||||||| | ||||||||    
T  38880710 cgtgatttcgtcgtatgagtgcgacgttgtgttgtttgccgtcttgtacgacgctgtttgattttgcatcttgttg 38880635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 561
Target Start/End: Complemental strand, 24350972 - 24350910
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  24350972 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 24350910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 46338963 - 46339102
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagc---tttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||| |||||||||  |||| ||| |||||||||||||||||| || |||||||   |||||||  || |||||||| | | |||| |  | | |||    
T  46338963 tcttcatctttttctctttatttcaatgtaaataagtgattttcacatagatctagcttttttttctttgtaatttcatcatttaagtgtggtgatttgt 46339062  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
     ||| |||||||||||||||||||||||||||| ||||||    
T  46339063 tgttcgtcgtcttgtgcggcgttgtttgattttccgtctt 46339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 14628046 - 14627908
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctac--gtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| ||||| |||| | || |||||||||||||||||||||| ||||| ||| ||||| | |  ||||||||||| | | |||| |  | | |||     
T  14628046 tcttcatctttttttctctaattcaatctaaataagtgattttcacataaatataggtttttttccttgtgatttcatcatctaagtgtggtggtttgtt 14627947  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||| ||||| ||||||||||||||||||||| |||||||    
T  14627946 gttcgtcgtattgtgcggcgttgtttgatttctcgtctt 14627908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 22742899 - 22742962
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  22742899 cgtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 22742962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 24069526 - 24069463
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||| |||||||| |||||||| ||| || ||||||||||||||| ||||||||    
T  24069526 cgtgatttcatcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgattt 24069463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 42311190 - 42311328
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    |||||||  ||||||||| |||| |||||||||||||||| ||||| || ||||||   |||||||  ||||||||||| | | |||| | || | |||     
T  42311190 tcttcatcattttctctctatttcaatctaaataagtgatattcacatagatctaggtttttttctttgtgatttcatcatttaagtgtggcggtttgtt 42311289  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||| |||||||| ||| ||||||||||||||| ||||||    
T  42311290 gttcgtcgtcttatgcagcgttgtttgattttccgtctt 42311328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 561
Target Start/End: Complemental strand, 44311931 - 44311860
Alignment:
Q  490 tttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||| |||||||||||||| |||||||| |||||| | ||| |||||||| |||| |||||||||||||    
T  44311931 tttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgattt 44311860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 561
Target Start/End: Original strand, 3394426 - 3394496
Alignment:
Q  491 ttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||| |||||||||||||| ||||||||  ||||||| ||| ||||||||||| || ||||||||||||    
T  3394426 ttttcttcgtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgattt 3394496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 518
Target Start/End: Original strand, 36143776 - 36143862
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtg 518  Q
    ||||||| |||||||||| | || |||||||||||||| |||||||||| ||||| | ||||||| ||||||||| |||| ||||||    
T  36143776 tcttcatctttttctctctaattcaatctaaataagtgtttttcacgtagatctaggttttttcttcgtgatttcgtcgtctgagtg 36143862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 557
Target Start/End: Complemental strand, 1485423 - 1485298
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || ||||||  |||||||  ||||||||||| | | |||| |  | | ||| |    
T  1485423 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctagattttttctttgtgatttcatcatctaagtgtggtggtttgttg 1485324  T
Q  532 tttgtcgtcttgtgcggcgttgtttg 557  Q
    || |||||||||||| ||||||||||    
T  1485323 ttcgtcgtcttgtgcagcgttgtttg 1485298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 434 - 569
Target Start/End: Complemental strand, 1448995 - 1448859
Alignment:
Q  434 cttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 532  Q
    |||||| | |||||||| |||| |||||||||||||||||||||| || ||||||  ||||| |  ||||||||||| | | |||| |    | ||| ||    
T  1448995 cttcatctctttctctctatttcaatctaaataagtgattttcacatagatctagattttttatttgtgatttcatcatctaagtgtggttgtttgttgt 1448896  T
Q  533 ttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    | ||||| ||||||||||||||||||||| |||||||    
T  1448895 tcgtcgtattgtgcggcgttgtttgatttctcgtctt 1448859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 431 - 494
Target Start/End: Original strand, 20116491 - 20116554
Alignment:
Q  431 cttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||||| ||||||| || |||| |||||||||||||||||||||| || |||||| |||||    
T  20116491 cttcttcatctttttctatctatttcaatctaaataagtgattttcacatagatctaggttttt 20116554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 26583624 - 26583754
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| ||||| |||| |||| |||||||||||||||||||||  || ||||||   |||||||  ||||||||||| | | |||| |  | | |||     
T  26583624 tcttcatctttttatctctatttcaatctaaataagtgattttcatatatatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 26583723  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||  ||||||||||||||||||||||||||    
T  26583724 gttcatcgtcttgtgcggcgttgtttgattt 26583754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 496
Target Start/End: Original strand, 32684595 - 32684658
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttct 496  Q
    |||||||  ||||||||| |||| |||||||||||||||||||||| || |||||| |||||||    
T  32684595 tcttcatcgttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttct 32684658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 35496342 - 35496212
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||||| |||||||||||||| || ||||||   |||||||  ||||||||||| | | |||| |  | | |||     
T  35496342 tcttcatctttttctctctatttcaatctaattaagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 35496243  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||  ||||||||||||||||||||| ||||    
T  35496242 gttcatcgtcttgtgcggcgttgtttcattt 35496212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 598
Target Start/End: Original strand, 48207812 - 48207978
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| ||||||||   |||| |||||||||||||||||||||| || ||||| | |||||||  ||||||||||| | | |||| |  | | ||| |    
T  48207812 tcttcatctttttctcaatatttcaatctaaataagtgattttcacatagatctatgttttttctttgtgatttcatcatctaagtgtggtgatttgttg 48207911  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    || |||||||||||| ||| ||||||||||  |||||| |||   |||||||||  ||| |||||||    
T  48207912 ttcgtcgtcttgtgctgcgctgtttgatttcccgtcttcttgcggtgttcatttgattcattttgaa 48207978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 2843394 - 2843333
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  2843394 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 2843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 23425538 - 23425409
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||  |||| ||||||||||||||||||| || || ||||| | |||||||  ||||||||||| | | |||| |  | | ||| |    
T  23425538 tcttcatctttttctctatatttcaatctaaataagtgatttttacatagatctaggttttttctttgtgatttcatcatttaagtgtggtggtttgttg 23425439  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || |||||||||||||| | ||||||||||    
T  23425438 ttcgtcgtcttgtgcggtgctgtttgattt 23425409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 26492275 - 26492336
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||| |||||||||||||||||| || |||||| |||||    
T  26492275 tcttcatctttttctctctatttcaatttaaataagtgattttcacatagatctagtttttt 26492336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 26623918 - 26623865
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    ||||||||||||| |||||||| |||||||| ||| |||||||||| |||||||    
T  26623918 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggcgtt 26623865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 585
Target Start/End: Complemental strand, 32522081 - 32521940
Alignment:
Q  445 tctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttg 543  Q
    |||||| |||| ||| |||||||||||||||||| || || || | ||||||| ||| |||||  | | |||||| |    ||||| ||| ||| |||||    
T  32522081 tctctctatttcaatttaaataagtgattttcacatagatttatgttttttcttcgttatttcgccatctgagtgtggttgtgtgttgttcgtcatcttg 32521982  T
Q  544 tgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    ||||||||||||||||||| ||| |||||||  |||||||||    
T  32521981 tgcggcgttgtttgattttccgttttgttgtggtgttcattt 32521940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 45199198 - 45199069
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatct-agctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||  |||||||| |||||||||||||||||  || |||| || |||||||  ||||||||||| | | |||| |  | | ||| |    
T  45199198 tcttcatctttttctctatattttaatttaaataagtgattttcatatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttg 45199099  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || ||||| |||||||||| ||||||||||    
T  45199098 ttcgtcgttttgtgcggcgctgtttgattt 45199069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 46821924 - 46821985
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  46821924 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttt 46821985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 21266302 - 21266378
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatc 509  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||  ||||||   ||||||||||    
T  21266302 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagggttttctttttgatttcatc 21266378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 484
Target Start/End: Original strand, 5546277 - 5546320
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaat 484  Q
    |||||||||| |||| |||||||||||||||||||||| |||||    
T  5546277 tttttctctctatttcaatctaaataagtgattttcacataaat 5546320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 585
Target Start/End: Original strand, 17611139 - 17611189
Alignment:
Q  535 gtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    |||||||||||||| |||||||||||||  ||||||||| | |||||||||    
T  17611139 gtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcattt 17611189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 571
Target Start/End: Complemental strand, 37837586 - 37837517
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgt 571  Q
    ||||||||||| | | |||||| |||||||| ||| |||||||||||||||   |||||||||| ||||||||    
T  37837586 gtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgtcttgt 37837517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 572
Target Start/End: Complemental strand, 41553566 - 41553492
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgtt 572  Q
    ||||||||| |||  ||||||| ||||||||| ||| ||||||||||| | |||| ||||||||  |||||||||    
T  41553566 cgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgtt 41553492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 572
Target Start/End: Complemental strand, 41553911 - 41553837
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgtt 572  Q
    ||||||||| |||  ||||||| ||||||||| ||| ||||||||||| | |||| ||||||||  |||||||||    
T  41553911 cgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgtt 41553837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 572
Target Start/End: Complemental strand, 41554256 - 41554182
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgtt 572  Q
    ||||||||| |||  ||||||| ||||||||| ||| ||||||||||| | |||| ||||||||  |||||||||    
T  41554256 cgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgtt 41554182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 19296833 - 19296886
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  19296833 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 19296886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 30756947 - 30756894
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  30756947 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 30756894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 34899735 - 34899682
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  34899735 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 34899682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 42978573 - 42978626
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  42978573 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 42978626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 542
Target Start/End: Complemental strand, 21552471 - 21552427
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtctt 542  Q
    ||||||||| |||| | ||||||||||||| ||||||||||||||    
T  21552471 cgtgatttcgtcgtcttagtgcgacgttgtttcgtttgtcgtctt 21552427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 481
Target Start/End: Complemental strand, 25287370 - 25287342
Alignment:
Q  453 ttttaatctaaataagtgattttcacgta 481  Q
    |||||||||||||||||||||||||||||    
T  25287370 ttttaatctaaataagtgattttcacgta 25287342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 569
Target Start/End: Original strand, 29844844 - 29844896
Alignment:
Q  517 tgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    |||| |||||||| ||||||||||||||||||  ||| ||||||||| |||||    
T  29844844 tgcggcgttgtgttgtttgtcgtcttgtgcggtattgcttgattttttgtctt 29844896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 7e-20; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 459 - 598
Target Start/End: Original strand, 36323799 - 36323936
Alignment:
Q  459 tctaaataagtgattttcacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttg 557  Q
    |||||||||||||||||||| || || ||| ||||| ||  |||||||| |||| |||||||| | |||||| |||||| ||||||||||||   |||||    
T  36323799 tctaaataagtgattttcacatagatttaggttttttctctgtgatttcgtcgtttgagtgcggctttgtgttgtttgttgtcttgtgcggc---gtttg 36323895  T
Q  558 atttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    |||| ||||||||||| | ||||||||| |||||| |||||    
T  36323896 atttctcgtcttgttgaaatgttcatttggttcctattgaa 36323936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 433 - 562
Target Start/End: Complemental strand, 2808637 - 2808508
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 532  Q
    ||||||| | |||||||| |||| | |||||||||||||||||||| || |||||| |||||||  ||||||||||| | | |||| |  | | ||| ||    
T  2808637 tcttcatctatttctctctatttcagtctaaataagtgattttcacatagatctaggtttttctttgtgatttcatcatctaagtgtggtggtttgttgt 2808538  T
Q  533 ttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    | ||||||||||||||||||||||||||||    
T  2808537 tcgtcgtcttgtgcggcgttgtttgatttt 2808508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 561
Target Start/End: Complemental strand, 10237394 - 10237290
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||||||||||||||||||||| || ||| || ||||  | ||||||||| |||| | ||||||||||||||| ||| |||||||||||| ||||| |||    
T  10237394 aatctaaataagtgattttcacatacatcaagtttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgttcttt 10237295  T
Q  557 gattt 561  Q
    |||||    
T  10237294 gattt 10237290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 498 - 573
Target Start/End: Complemental strand, 12648053 - 12647978
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    |||||||||||||| | ||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  12648053 cgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttg 12647978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 26025576 - 26025439
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| |||||||||||||| ||||||| || |||||| ||||| ||  ||||||||||| | | |||| |    | ||| |    
T  26025576 tcttcatctttttctctctatttcaatctaaataagtggttttcacatagatctaggttttttctttgtgatttcatcatgtaagtgtggtagtttgttg 26025477  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
     | |||||||||||||||||||||||||||||||||||    
T  26025476 gtcgtcgtcttgtgcggcgttgtttgatttttcgtctt 26025439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 3308908 - 3308971
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | |||||||||||||||  ||||||||||||||||||||||||||||||    
T  3308908 cgtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtcttgtgcggcgttgtttgattt 3308971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 562
Target Start/End: Original strand, 34598902 - 34599032
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || ||||||  ||||| |  ||||||||||| | | |||| |  | | ||| |    
T  34598902 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgttg 34599001  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    ||  |||||||||||||||||||||||||||    
T  34599002 ttcatcgtcttgtgcggcgttgtttgatttt 34599032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 40660096 - 40659969
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||  |||||||  ||||||||||| | | |||| |  | | ||| |    
T  40660096 tcttcatctttttctct--atttcaatctaaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtggtgctttgttg 40659999  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || |||||||||||||||||||||||||||    
T  40659998 ttcgtcgtcttgtgcggcgttgtttgattt 40659969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 3725095 - 3725232
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| ||| |||||||||||||||||| || |||| |  |||||||  ||||||||||||| | |||| |  | | ||| |    
T  3725095 tcttcatctttttctctctatttcaatataaataagtgattttcacatagatcttgattttttctttgtgatttcatcgtctaagtgtggtggtttgttg 3725194  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || || ||||||| |||||||||||||||| |||||||    
T  3725195 ttcgttgtcttgtacggcgttgtttgatttctcgtctt 3725232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 8805781 - 8805910
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    |||||||||||||||||  |||| ||| |||||||||||||||||| |  ||||| | |||||||  ||||||||||| | |||||| |  | | ||| |    
T  8805781 tcttcatatttttctctttatttcaatttaaataagtgattttcacatggatctaggttttttctttgtgatttcatcatctgagtgtggtggtttgttg 8805880  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || ||||||||||||| |||||||||||||    
T  8805881 ttcgtcgtcttgtgcgacgttgtttgattt 8805910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 30420591 - 30420730
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||    |||||||  || |||||||| | | |||| |  | | |||    
T  30420591 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgt 30420690  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
     ||| |||||||||||||||||||||||||||| ||||||    
T  30420691 tgttcgtcgtcttgtgcggcgttgtttgattttccgtctt 30420730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 441 - 559
Target Start/End: Original strand, 23903314 - 23903434
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtc 537  Q
    ||||||||||||||||||| |||||||||| |||| || || ||||||    ||||||| ||||||||| |||| | | |||| ||||||   |||||||    
T  23903314 tttttctctccattttaatataaataagtggttttgacatatatctagattttttttcttcgtgatttcgtcgtctaaatgcgtcgttgttgtgtttgtc 23903413  T
Q  538 gtcttgtgcggcgttgtttgat 559  Q
    || |||||||||||||||||||    
T  23903414 gt-ttgtgcggcgttgtttgat 23903434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 4228046 - 4228185
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctac---gtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||||||||| |||  |||| ||| |||||||||||||| ||| || |||||  ||||| | |   ||||||||||| | | |||| || | | |||    
T  4228046 tcttcatatttttatctttatttcaatataaataagtgatttacacatagatctatgttttttttctttgtgatttcatcatctaagtgtgatggtttgt 4228145  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
     ||| |||||||||||||||||||||||||||| ||||||    
T  4228146 tgttcgtcgtcttgtgcggcgttgtttgattttccgtctt 4228185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 6173546 - 6173607
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  6173546 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttt 6173607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 31581886 - 31581825
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  31581886 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagtttttt 31581825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 8971795 - 8971664
Alignment:
Q  433 tcttcatatttttctctcc--attttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||| ||||||||||   ||||||||||||||||||||||||||| || ||||| | |||||||  ||||||||||| | | |||  |  | | |||    
T  8971795 tcttcatctttttctctctttattttaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtatggtggtttgt 8971696  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
     ||| |||||||||||| ||||||||||||||    
T  8971695 tgttcgtcgtcttgtgcagcgttgtttgattt 8971664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 442 - 569
Target Start/End: Original strand, 32913165 - 32913293
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtc 540  Q
    ||||||||  |||| ||| |||||||||||||||||| || |||||| ||||| ||  ||||||||||| | | |||| |  | | ||| ||| ||||||    
T  32913165 ttttctctatatttcaatttaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 32913264  T
Q  541 ttgtgcggcgttgtttgatttttcgtctt 569  Q
    |||||||||| ||||||||||| ||||||    
T  32913265 ttgtgcggcgctgtttgattttccgtctt 32913293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 560
Target Start/End: Complemental strand, 40626186 - 40626066
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgt 539  Q
    |||||||||| |||| |||||||||||| ||||||||| || ||||| | |||||||  ||||||||||| | | |||| |  | | ||| ||| |||||    
T  40626186 tttttctctctatttcaatctaaataagggattttcacatagatctacgttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 40626087  T
Q  540 cttgtgcggcgttgtttgatt 560  Q
    ||||||||| |||||||||||    
T  40626086 cttgtgcggtgttgtttgatt 40626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 598
Target Start/End: Original strand, 45128118 - 45128285
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||  |||| ||||||||||||||| |||||| || |||||| |||||  ||  ||||||||||| | | |||| |  | | |||     
T  45128118 tcttcatctttttctctttatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 45128217  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    ||| ||||||||||||||||||||||| ||| || |||| |||   |||||||||  ||||| |||||    
T  45128218 gttcgtcgtcttgtgcggcgttgtttgctttctcatcttcttgcggtgttcattttattcctattgaa 45128285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 583
Target Start/End: Original strand, 4192753 - 4192904
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || || || | |||||||  ||||||||||| | | |||| |  | | ||| |    
T  4192753 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatttaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 4192852  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcat 583  Q
    || ||||||||||| || ||||||||||||  |||||| ||| | |||||||    
T  4192853 ttcgtcgtcttgtgtggtgttgtttgatttcccgtcttcttgcagtgttcat 4192904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 569
Target Start/End: Original strand, 10548229 - 10548276
Alignment:
Q  522 cgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||    
T  10548229 cgttgtgttatttgtcgtcttgtgcgacgttgtttgatttttcgtctt 10548276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 29574761 - 29574698
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| ||||  ||||||| |||||||| ||| ||||||||||||||| |||||||||||    
T  29574761 cgtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgattt 29574698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 561
Target Start/End: Complemental strand, 32448750 - 32448688
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | |||||||| |||||| ||| ||||||||||||| |||||||||||||    
T  32448750 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcgccgttgtttgattt 32448688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 575
Target Start/End: Complemental strand, 6359006 - 6358929
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgta 575  Q
    ||||||||  |||| |||||| | |||||||| ||| |||||||||||| ||||||||||||||  | ||||||||||    
T  6359006 cgtgattttgtcgtctgagtgtgtcgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgta 6358929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 569
Target Start/End: Complemental strand, 7015869 - 7015740
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgt 539  Q
    |||||||||  |||| ||||||||||| |||||||||| || || ||| ||||| |   ||||||||||| | | |||| |  | | ||| ||| |||||    
T  7015869 tttttctctttatttcaatctaaataattgattttcacatagatttaggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 7015770  T
Q  540 cttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||||||||||||||||||||||| ||||||    
T  7015769 cttgtgcggcgttgtttgattttccgtctt 7015740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 9986488 - 9986371
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagcttt-----ttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgt 551  Q
    |||||||||||||||||||||| || |||||| |||     ||||  ||||||||||| | | |||| |  | | ||| ||| |||||||||||||||||    
T  9986488 aatctaaataagtgattttcacatagatctaggtttattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 9986389  T
Q  552 tgtttgatttttcgtctt 569  Q
    ||||||||||| ||||||    
T  9986388 tgtttgattttccgtctt 9986371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 21570575 - 21570514
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  21570575 tcttcatctttttctctatatttcaatctaaataagtgattttcacatagatctagattttt 21570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 27249318 - 27249257
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  27249318 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 27249257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 32680749 - 32680688
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||||| |||||    
T  32680749 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttt 32680688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 36233919 - 36233980
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  36233919 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttt 36233980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 27477069 - 27477200
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||  |||| ||||||||||||| |||||||| || ||||||  |||||||  ||||||||||| | || |||    ||| ||| |    
T  27477069 tcttcatctttttctctatatttcaatctaaataagtaattttcacatagatctagattttttctttgtgatttcatcatctg-gtg----gtt-tgttg 27477162  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||||| ||||||||||||| ||||||||||| ||||||    
T  27477163 tttgtagtcttgtgcggcgctgtttgattttccgtctt 27477200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 574
Target Start/End: Complemental strand, 34128813 - 34128741
Alignment:
Q  502 atttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 574  Q
    ||||| |||| ||||||||  ||| ||| ||| ||||||||||||| |||||||||||| | |||||||||||    
T  34128813 atttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgt 34128741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 478
Target Start/End: Complemental strand, 41712923 - 41712887
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcac 478  Q
    ||||||||| |||||||||||||||||||||||||||    
T  41712923 ttttctctctattttaatctaaataagtgattttcac 41712887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 585
Target Start/End: Original strand, 37994246 - 37994333
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    ||||||||| | || |||||||| |||||||| ||| ||| || ||| |||| |||||||||||| | |||||||| | |||||||||    
T  37994246 cgtgatttcgttgtctgagtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcattt 37994333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 37416702 - 37416760
Alignment:
Q  523 gttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttc 581  Q
    ||||||| ||| ||||||||||||| |||||||||||||  | |||||||||| |||||    
T  37416702 gttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgttc 37416760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 571
Target Start/End: Complemental strand, 42698829 - 42698761
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgt 571  Q
    ||||||||||||| | ||||||||||||||| ||| ||||||||||| |||   |||||||||| ||||||||    
T  42698829 gtgatttcatcgtct-agtgcgacgttgtgttgttcgtcgtcttgtgtggc---gtttgattttgcgtcttgt 42698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 7678002 - 7677949
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  7678002 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 7677949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 11985359 - 11985263
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    |||||||| |||| | |||||| | |||||| |||||| ||||||||||||   |||||||||| |||||||| |   ||||||||| |||||| |||||    
T  11985359 gtgatttcgtcgtctaagtgcggctttgtgttgtttgttgtcttgtgcggc---gtttgattttgcgtcttgtcgcggtgttcatttagttcctattgaa 11985263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 18763439 - 18763492
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    ||||||||||||| | ||||||  ||||||| ||| ||||||||||||||||||    
T  18763439 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 18763492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 19953631 - 19953728
Alignment:
Q  462 aaataagtgattttcacgtaaatctagctttttcta-cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtc-ttgtgcggcgttgtttg 557  Q
    ||||||||||||||||| |  || | | |||||||  ||| ||||| |||| | ||| ||||||||||| |||||||||| |||||||||||||||||    
T  19953631 aaataagtgattttcacatctatttcgttttttctttcgtaatttcgtcgtcttagtacgacgttgtgttgtttgtcgtctttgtgcggcgttgtttg 19953728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 561
Target Start/End: Complemental strand, 20145858 - 20145797
Alignment:
Q  500 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||| ||||| |||||| | |||||||| ||| || ||||||||||||||||||| ||||    
T  20145858 tgattttatcgtctgagtgtggcgttgtgttgttggttgtcttgtgcggcgttgtttaattt 20145797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 36943250 - 36943197
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  36943250 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 36943197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 573
Target Start/End: Complemental strand, 37614187 - 37614150
Alignment:
Q  536 tcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  37614187 tcgtcttgtgcgtcgttgtttgattttccgtcttgttg 37614150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 494
Target Start/End: Original strand, 42949637 - 42949690
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  42949637 tttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 42949690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 22421659 - 22421711
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||||| |||| ||||||||||||||| |||||| || |||||| |||||    
T  22421659 ttttctctctatttcaatctaaataagtgactttcacatagatctaggttttt 22421711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 500 - 552
Target Start/End: Complemental strand, 31210735 - 31210683
Alignment:
Q  500 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    ||||||| |||| | |||||| |||||||| |||||| |||||||||||||||    
T  31210735 tgatttcgtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtt 31210683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 433 - 567
Target Start/End: Original strand, 34611721 - 34611857
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||||||||||| || |||| | |||||||||||||||||||| ||||||||| |||||  ||  ||||||||||| | | |||| |  | | |||     
T  34611721 tcttcatatttttctttctatttcagtctaaataagtgattttcacataaatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 34611820  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtc 567  Q
    ||| |||||||||||||||||||||||||||| ||||    
T  34611821 gttcgtcgtcttgtgcggcgttgtttgattttccgtc 34611857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 35580375 - 35580512
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| ||| |||||||||||||||||| || ||||| | ||||||| |||||||||||| | | |||| |  | | ||| |    
T  35580375 tcttcatctttttctctctatttcaatttaaataagtgattttcacatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttg 35580474  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || ||||||||||||| |||||||||||||| ||||||    
T  35580475 ttcgtcgtcttgtgcgacgttgtttgattttccgtctt 35580512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 598
Target Start/End: Complemental strand, 43192503 - 43192346
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtc 540  Q
    ||||||||| |||| |||||||||||||| |||| || || |||||| ||||| || |||||||||||| | | |||| |  | | ||| ||| ||||||    
T  43192503 ttttctctctatttcaatctaaataagtggtttttacatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 43192404  T
Q  541 ttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    |||||||||||||||||||||| |||||| ||||  |||||||||  ||| |||||||    
T  43192403 ttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaa 43192346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 433 - 573
Target Start/End: Original strand, 28239750 - 28239892
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgatttt-cacgtaaatctagctttt-tctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| |||||||||||||| |||| ||| || |||||| |||| |||||| |||||| || | |||||| | || | |||     
T  28239750 tcttcatctttttctctctatttcaatctaaataagtgttttttcacatagatctaggttttctctacgcgatttcgtcatttgagtgtggcggtttgtt 28239849  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||| ||||||||||||||||||||||||||  |||| ||||||    
T  28239850 gttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttg 28239892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 41896472 - 41896535
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||| | ||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  41896472 cgtgatttcatcgtcttagtacgacgttgtgttgttggtcgtcttgtgcggcgttgtttgattt 41896535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 11196809 - 11196944
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||| | |||||||   |||||||||| | | |||| |  | | ||| |    
T  11196809 tcttcatctttttctct--atttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttg 11196906  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || |||||||||||||||||||||||||||| ||||||    
T  11196907 ttcgtcgtcttgtgcggcgttgtttgattttccgtctt 11196944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 16794210 - 16794287
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtga-ttttcacgtaaatctagctttttctacgtgatttcatc 509  Q
    ||||||| |||||||||| | || ||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  16794210 tcttcatctttttctctctaattcaatctaaataagtgatttttcacataaatctaggtttttcttcgtgatttcatc 16794287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 42448195 - 42448056
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttt---tctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||| |||||||||| |||| |||||||||||||||||| ||  || |||||| ||||   |||  ||||||||||| | | |||| |  | | |||    
T  42448195 tcttcatctttttctctctatttcaatctaaataagtgatttacatatagatctaggttttgtttctttgtgatttcatcatctaagtgtggaggtttgt 42448096  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
     ||| ||||||||||||||| |||||||||||||||||||    
T  42448095 tgttcgtcgtcttgtgcggcattgtttgatttttcgtctt 42448056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 4808881 - 4809019
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| ||||| |||  |||| ||| |||||||||||||||||| || ||||||||||||  ||  || |||||||| | | |||| |  | | |||     
T  4808881 tcttcatctttttttctttatttcaatgtaaataagtgattttcacatagatctagctttttttctttgtaatttcatcatctaagtgtggtgatttgtt 4808980  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||| |||||||||||||||||||||||||||| ||||||    
T  4808981 gttcgtcgtcttgtgcggcgttgtttgattttccgtctt 4809019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 18890833 - 18890770
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  18890833 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgattt 18890770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 561
Target Start/End: Complemental strand, 20227418 - 20227347
Alignment:
Q  490 tttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||| |||||||||||||| |||||||| |||||| | ||| |||||||| |||| |||||||||||||    
T  20227418 tttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgattt 20227347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 39657409 - 39657472
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||||||||||| | ||| |||||||||||||||||||||||||||    
T  39657409 cgtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgattt 39657472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 14907091 - 14906960
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||   ||||||||  || |||||||| |   | || |  | | |||    
T  14907091 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttctttttctttgtaatttcatcatcaaaatgtggtgatttgt 14906992  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
     |||||||||||||||||||||||||||||||    
T  14906991 tgtttgtcgtcttgtgcggcgttgtttgattt 14906960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 493 - 590
Target Start/End: Complemental strand, 24099390 - 24099293
Alignment:
Q  493 ttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttc 590  Q
    |||| ||||||||| |||| ||||||||||||||||| ||| |||||| ||| | ||||||||||||||  | ||||||||   ||||||||| ||||    
T  24099390 ttcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttc 24099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 572
Target Start/End: Original strand, 5333403 - 5333462
Alignment:
Q  513 tgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgtt 572  Q
    ||||||||  ||||||| ||| |||||||||||||| ||||||||||||| |||||||||    
T  5333403 tgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgtt 5333462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 561
Target Start/End: Complemental strand, 1236825 - 1236763
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | |||||||| |||||| ||| || ||||||||||||||||||||||||    
T  1236825 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgattt 1236763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 561
Target Start/End: Complemental strand, 1239525 - 1239463
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | |||||||| |||||| |||  ||||||||||||||||||||||||||    
T  1239525 gtgatttcgtcgtctaagtgcgaccttgtgttgttcatcgtcttgtgcggcgttgtttgattt 1239463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 590
Target Start/End: Complemental strand, 8443639 - 8443549
Alignment:
Q  500 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttc 590  Q
    ||||||| |||| | ||||||  ||||||| ||| ||||||||||||||||||||||||||   |||||||||| | ||||| ||| ||||    
T  8443639 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttc 8443549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 2655786 - 2655847
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  2655786 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttt 2655847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 9072634 - 9072695
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||| ||||||||||| |||||| ||||||||| |||||    
T  9072634 tcttcatctttttctctctatttcaatttaaataagtgactttcacataaatctagattttt 9072695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 572
Target Start/End: Complemental strand, 15597334 - 15597193
Alignment:
Q  433 tcttcatatttttctc-tccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||  ||||||| |||||||||||||||||||||| || ||||| | ||||||| | ||||||| || |  |||||    | |||||     
T  15597334 tcttcatctttttctagtccatttcaatctaaataagtgattttcacatagatctaggttttttcttcatgatttcgtcatccgagtgtagtggtgtgtt 15597235  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgtt 572  Q
    ||||||||||||||| ||| ||| |||||||| ||| |||||    
T  15597234 gtttgtcgtcttgtgaggccttggttgattttccgttttgtt 15597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 33895998 - 33896059
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||||| |||||    
T  33895998 tcttcatctttttctctctatttaaatctaaataagtgactttcacatagatctaggttttt 33896059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 32724647 - 32724595
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  32724647 ttttctctctatttcaatctaaataagtgattttcacatagatctagattttt 32724595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 555
Target Start/End: Original strand, 14585663 - 14585718
Alignment:
Q  500 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtt 555  Q
    ||||||| |||| | || |||||||||||| ||| |||||||||||||||||||||    
T  14585663 tgatttcgtcgtcttagcgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtt 14585718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 573
Target Start/End: Complemental strand, 29617379 - 29617329
Alignment:
Q  523 gttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||||| ||| |||||||||||||||| ||||||||||  ||||||||||    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttg 29617329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 570
Target Start/End: Original strand, 36033365 - 36033435
Alignment:
Q  500 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttg 570  Q
    ||||||| |||| |||| |||  ||||| | |||||| |||||||||| |||| |||||||||||||||||    
T  36033365 tgatttcttcgtttgagagcggtgttgtattgtttgttgtcttgtgcgacgttatttgatttttcgtcttg 36033435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 545
Target Start/End: Complemental strand, 40619199 - 40619153
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtg 545  Q
    ||||||||||||| | |||||| |||||||| |||||||||||||||    
T  40619199 gtgatttcatcgtctaagtgcggcgttgtgttgtttgtcgtcttgtg 40619153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 478
Target Start/End: Complemental strand, 9619525 - 9619480
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcac 478  Q
    ||||||| |||||||||  |||| ||||||||||||||||||||||    
T  9619525 tcttcatctttttctctttatttcaatctaaataagtgattttcac 9619480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 570
Target Start/End: Complemental strand, 17427382 - 17427244
Alignment:
Q  436 tcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt----ctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    |||| |||||||||| |||| | | |||||||||| ||||||  || |||||| |||||    || ||| ||||| || |||||||| ||| ||||||      
T  17427382 tcatctttttctctctatttcagtgtaaataagtgcttttcaaatagatctaggttttttcttcttcgttatttcgtcatatgagtgtgacattgtgtta 17427283  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtcttg 570  Q
    ||  |||||||||||| |||||||| |||||| ||||||    
T  17427282 ttcttcgtcttgtgcgccgttgtttaattttttgtcttg 17427244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 557
Target Start/End: Complemental strand, 5917758 - 5917698
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtc-ttgtgcggcgttgtttg 557  Q
    ||||||||| |||| | ||||||||||||||| ||| |||||| ||||||| |||||||||    
T  5917758 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcgacgttgtttg 5917698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 435 - 561
Target Start/End: Complemental strand, 8196572 - 8196444
Alignment:
Q  435 ttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 532  Q
    ||||| |||||||||| |||| |||||||||||||||||||||| || ||||||   |||||||  ||||||||||| ||| |||| |  | | ||| ||    
T  8196572 ttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatataagtgtggtggtttgttgt 8196473  T
Q  533 ttgtcgtcttgtgcggcgttgtttgattt 561  Q
    | |||||||||||||||||||||||||||    
T  8196472 tcgtcgtcttgtgcggcgttgtttgattt 8196444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 449 - 573
Target Start/End: Original strand, 25337496 - 25337622
Alignment:
Q  449 tccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgc 546  Q
    ||||||| ||||||||||| |||||||||| ||||||||| |||||  || ||||||||| || |  ||||| |  | ||||| ||| ||||||||| ||    
T  25337496 tccatttcaatctaaataaatgattttcacataaatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgc 25337595  T
Q  547 ggcgttgtttgatttttcgtcttgttg 573  Q
    || ||||||||||||||||||||||||    
T  25337596 ggtgttgtttgatttttcgtcttgttg 25337622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 574
Target Start/End: Complemental strand, 34185824 - 34185749
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 574  Q
    ||||||||||||| |||||||| | |||||  ||||||||||||||| | |||||||||||||| |||||||||||    
T  34185824 gtgatttcatcgtttgagtgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgt 34185749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 573
Target Start/End: Complemental strand, 26588603 - 26588529
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    |||| |||||||| ||||||||  ||||||| | |||||||||||||||||||||||||||||  ||||||||||    
T  26588603 gtgaattcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttg 26588529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 4468469 - 4468606
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| || ||||||| |||| |||||||||||||||||||||  || ||||| | |||||||  ||||||||||| ||| |||| |  | | |||      
T  4468469 tcttcatcttgttctctctatttcaatctaaataagtgattttcatatagatctaggttttttctttgtgatttcatcatataagtgtggtggtttgtta 4468568  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || |||||||||||| ||||||||||||||| ||||||    
T  4468569 ttcgtcgtcttgtgcagcgttgtttgattttccgtctt 4468606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 23947484 - 23947355
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    |||||||  ||||||||| |||| |||||||||||||||||||||| || ||||| | |||||||   |||||||||| | | |||| |  | | ||| |    
T  23947484 tcttcatcgttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttg 23947385  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || |||||||||||||||||||||||||||    
T  23947384 ttcgtcgtcttgtgcggcgttgtttgattt 23947355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 528482 - 528390
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttc 590  Q
    ||||||||| ||||   |||||||||||||||  |||||| ||||||||||||||||||||||||  ||||||||| | ||||  ||||||||    
T  528482 cgtgatttcgtcgtccaagtgcgacgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttcgttc 528390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 25398500 - 25398603
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    ||||||||||||||||||| ||||| ||||||  |||||| |||||||| ||||| ||||||||||  ||||| ||| || ||||||||| | ||| |||    
T  25398500 aatctaaataagtgattttaacgtagatctag-gttttcttcgtgattttatcgtttgagtgcgacagtgtgttgttcgttgtcttgtgcagtgtttttt 25398598  T
Q  557 gattt 561  Q
    |||||    
T  25398599 gattt 25398603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 30776626 - 30776690
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    ||||||||| |||| | ||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  30776626 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatcttgtgcggcgttgtttgatttt 30776690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 545984 - 546047
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||| | |||||||||||| || ||| ||||||||||||| |||||||||||||    
T  545984 cgtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgtcttgtgcgacgttgtttgattt 546047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 561
Target Start/End: Complemental strand, 33740745 - 33740615
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || || |||   |||||||  ||||||||||| | | |||| | || | |||     
T  33740745 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatttaggtttttttctttgtgatttcatcatctaagtgtggcggtttgtt 33740646  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||| ||||| |||||||||||||||| ||||    
T  33740645 gttcgtcgttttgtgcggcgttgtttcattt 33740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 12652850 - 12652911
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  12652850 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagattttt 12652911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 25064145 - 25064276
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||    |||||||  || |||||||| | | |||| |  | | |||    
T  25064145 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgt 25064244  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
     ||| |||||||||||||||||||||||||||    
T  25064245 tgttcgtcgtcttgtgcggcgttgtttgattt 25064276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 574
Target Start/End: Complemental strand, 7976309 - 7976233
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 574  Q
    ||||||||| |||| ||||||||  ||||||| ||| |||||||||||||||||| ||| ||| | |||||||||||    
T  7976309 cgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgt 7976233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 14801781 - 14801845
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    ||||||||| |||| | |||||||| |||||| ||| |||||||||||||||| |||||||||||    
T  14801781 cgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgctgtttgatttt 14801845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 585
Target Start/End: Original strand, 31296793 - 31296865
Alignment:
Q  513 tgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    |||||||| |||||||| |||  || |||||||||||||||||||||||| | |||||||| | |||||||||    
T  31296793 tgagtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcattt 31296865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 1523362 - 1523425
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||||||||||||| ||| ||||||||||||| | |||||||||||    
T  1523362 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacattgtttgattt 1523425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 432 - 562
Target Start/End: Complemental strand, 7881271 - 7881138
Alignment:
Q  432 ttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtg 528  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||    |||||||  |  |||||||| | | |||| |  | | ||    
T  7881271 ttcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttttttctttgcaatttcatcatctaagtgtggtgatttg 7881172  T
Q  529 tcgtttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    | ||| ||||||||||||||||||||||||||||    
T  7881171 ttgttcgtcgtcttgtgcggcgttgtttgatttt 7881138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 8102680 - 8102743
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||| |||||||||  || |||||||||||||||||||||||||||    
T  8102680 cgtgatttcgtcgtcttagtgcaacgttgtgtttttcgtcgtcttgtgcggcgttgtttgattt 8102743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 8496875 - 8497015
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag----ctttttctacgtgatttcatcgtatgagtgcgacgttgtg 528  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||     |||||||  ||  ||||||| | | ||||||  | | ||    
T  8496875 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttttctttgtagtttcatcatttaagtgcggtgatttg 8496974  T
Q  529 tcgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    | ||| ||| ||||||||||||||||||||||| |||||||    
T  8496975 ttgttcgtcatcttgtgcggcgttgtttgatttctcgtctt 8497015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 572
Target Start/End: Original strand, 22571447 - 22571506
Alignment:
Q  513 tgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgtt 572  Q
    ||||| ||| ||||||| ||| |||||||||||||||||||||||||||| ||| |||||    
T  22571447 tgagtacgatgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgtt 22571506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 30493490 - 30493553
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| ||||||||  ||||||| ||| |||||||||||| ||||||||||||||    
T  30493490 cgtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgattt 30493553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 435 - 573
Target Start/End: Complemental strand, 33543784 - 33543645
Alignment:
Q  435 ttcatatttttctctccattttaatctaaataagtgatttt-cacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtt 533  Q
    ||||| |||||||||  |||| ||||||||||||| ||||| ||| || || ||  ||||||| ||||||||| || | ||| |  |  | ||||| |||    
T  33543784 ttcatctttttctctatatttcaatctaaataagtaatttttcacatagatttaagtttttcttcgtgatttcgtcatctgattatggtggtgtgttgtt 33543685  T
Q  534 tgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
     ||||||||||||||||||||||||||||  |||||||||    
T  33543684 cgtcgtcttgtgcggcgttgtttgattttctgtcttgttg 33543645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 561
Target Start/End: Complemental strand, 8028284 - 8028155
Alignment:
Q  434 cttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta--gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    |||||| ||||||||||  ||| |||||||||||||||||||||| || |||||    |||||||   |||||||||| | | |||| |  | | ||| |    
T  8028284 cttcatctttttctctctgtttcaatctaaataagtgattttcacatagatctaagtttttttctttatgatttcatcatctaagtgtggtggtttgttg 8028185  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || |||||||||||||||||||||||||||    
T  8028184 ttcgtcgtcttgtgcggcgttgtttgattt 8028155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 7876212 - 7876151
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  7876212 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttt 7876151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 566
Target Start/End: Complemental strand, 28635289 - 28635153
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgatt--ttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||||||||||| |  |||| ||| |||||||||||||  || || || ||||| | ||||||||||||||||| || | |||||| | || | |||    
T  28635289 tcttcatatttttctttttatttcaatttaaataagtgattcttttacatagatctaagttttttctacgtgatttcgtcatttgagtgtggcggtttgt 28635190  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgt 566  Q
     ||| |||||||||| ||| |||||||||||| ||||    
T  28635189 tgttcgtcgtcttgtacggtgttgtttgatttctcgt 28635153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 33109744 - 33109805
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  33109744 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 33109805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 487
Target Start/End: Original strand, 13436703 - 13436751
Alignment:
Q  439 tatttttctctccattttaatctaaataagtgattttcacgtaaatcta 487  Q
    |||||||||||| |||| ||| |||||||||||||||||| ||||||||    
T  13436703 tatttttctctctatttcaatttaaataagtgattttcacataaatcta 13436751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 585
Target Start/End: Original strand, 10228589 - 10228743
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| ||| |||||| | || ||||||||||||||| ||| || || |||||  |||||  ||  ||||||||||| | | |||| || | | |||     
T  10228589 tcttcatctttctctctctacttcaatctaaataagtgacttttacatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgtt 10228688  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    ||| ||||||||||||||||||||||| |||  |||||| ||||  |||||||||    
T  10228689 gttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattt 10228743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 557
Target Start/End: Original strand, 16419068 - 16419194
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatc--tagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||  |   |||||||  ||||||||||| | | |||| |  | | |||     
T  16419068 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctttgtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 16419167  T
Q  531 gtttgtcgtcttgtgcggcgttgtttg 557  Q
    ||| |||||||||||||||||||||||    
T  16419168 gttcgtcgtcttgtgcggcgttgtttg 16419194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 562
Target Start/End: Original strand, 28981136 - 28981199
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    ||||||| ||||| ||||| || |||||||| ||| |||||||| ||||| |||||||||||||    
T  28981136 gtgattttatcgtctgagtacggcgttgtgttgttcgtcgtcttctgcggtgttgtttgatttt 28981199  T

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Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 569
Target Start/End: Original strand, 17334792 - 17334826
Alignment:
Q  535 gtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    |||||||||||||||||||||||||||| ||||||    
T  17334792 gtcgtcttgtgcggcgttgtttgattttccgtctt 17334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 561
Target Start/End: Original strand, 34489188 - 34489290
Alignment:
Q  461 taaataagtgatttt-cacgtaaatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttga 558  Q
    ||||||||||||||| ||| || |||||| ||||| || |||||||||||| |  ||||| |  | ||||| ||| ||||||||||||| ||||||||||    
T  34489188 taaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcgacgttgtttga 34489287  T
Q  559 ttt 561  Q
    |||    
T  34489288 ttt 34489290  T

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Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 17237451 - 17237390
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| ||||||||||||| |||||||| || |||||| |||||    
T  17237451 tcttcatctttttctctatatttcaatctaaataagttattttcacatagatctaggttttt 17237390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 23128580 - 23128633
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    ||||||||||||| | |||||| |||||||| ||| ||||||||||| ||||||    
T  23128580 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt 23128633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 32059871 - 32059924
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||| |||||||||| ||| ||||||||||||||||||    
T  32059871 gtgatttcttcgtctaagtgtgacgttgtgttgttcgtcgtcttgtgcggcgtt 32059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 32327345 - 32327292
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||||| || | |||||| |||||||| ||| ||||||||||||||||||    
T  32327345 gtgatttcatagtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 32327292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 33053296 - 33053243
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  33053296 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 33053243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 478
Target Start/End: Complemental strand, 4984736 - 4984700
Alignment:
Q  442 ttttctctccattttaatctaaataagtgattttcac 478  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  4984736 ttttctctctatttcaatctaaataagtgattttcac 4984700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 31852316 - 31852272
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttg 543  Q
    |||||||| |||| ||||||||||||||||| ||| |||||||||    
T  31852316 gtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttg 31852272  T

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Target: scaffold0888 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 561
Target Start/End: Complemental strand, 1855 - 1751
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||||||||||||||||||||| || ||| || ||||  | ||||||||| |||| | ||||||||||| ||| ||| |||||||||| |||||||||||    
T  1855 aatctaaataagtgattttcacatacatcaagtttttctttcgtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgtccggcgttgttt 1756  T
Q  557 gattt 561  Q
    |||||    
T  1755 gattt 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 574
Target Start/End: Original strand, 29239299 - 29239375
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 574  Q
    |||||||||||||| |||||||| |||||||| ||| |||||||||||||||| ||||||||||  |||||||||||    
T  29239299 cgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgt 29239375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 574
Target Start/End: Original strand, 41818168 - 41818244
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 574  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||||||  |||||||||||  |||||||||||    
T  41818168 cgtgatttcatcgtatgagtgcgacattgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgt 41818244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 433 - 566
Target Start/End: Original strand, 22802929 - 22803064
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtga-ttttcacgtaaatctagctttt-tctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||||||| |||||| |||| |||| ||| |||| || | |||||| | || | |||     
T  22802929 tcttcatctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggttttctctatgtgctttcgtcatttgagtgtggcggtttgtt 22803028  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgt 566  Q
    ||| |||||||| |||||||||||||||||| ||||    
T  22803029 gttcgtcgtcttatgcggcgttgtttgatttctcgt 22803064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 29503370 - 29503507
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    |||||||||||||||||  |||| ||||||||||| |||||||||| || ||||| | |||||||  ||||||||||| | | |||| |  | | ||| |    
T  29503370 tcttcatatttttctctatatttcaatctaaataattgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 29503469  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || |||||||||||||||| ||||||||||| ||||||    
T  29503470 ttcgtcgtcttgtgcggcgctgtttgattttccgtctt 29503507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 42719428 - 42719562
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 532  Q
    ||||| |||||||||||| |||| ||| ||||||||||||||||| ||| |||||| ||||  || |||| |||||| | | |||| |  | | ||| ||    
T  42719428 tcttcgtatttttctctctatttcaatttaaataagtgattttcatgtagatctaggtttt--tatgtgagttcatcatctaagtgtggtggtttgttgt 42719525  T
Q  533 ttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    | |||||||||||||||||||||||||||| ||||||    
T  42719526 tcgtcgtcttgtgcggcgttgtttgattttccgtctt 42719562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 561
Target Start/End: Complemental strand, 51303820 - 51303716
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||| ||||||||||||||||| || ||| || ||||  | ||||||||| |||| | ||||||||||||||| |||||||||||| || || |||||||    
T  51303820 aatccaaataagtgattttcacatacatcaagtttttctttcgtgatttcgtcgttttagtgcgacgttgtgttgtttgtcgtcttatgaggtgttgttt 51303721  T
Q  557 gattt 561  Q
    |||||    
T  51303720 gattt 51303716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 7546566 - 7546629
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  7546566 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 7546629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 16235378 - 16235441
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||| | ||||||||||||||| ||| | |||||||||||||||||||||||||    
T  16235378 cgtgatttcatcgtcttagtgcgacgttgtgttgttcgccgtcttgtgcggcgttgtttgattt 16235441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 4178472 - 4178533
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||  |||||||||||||||    
T  4178472 tcttcatctttttctctctatttcaatctaaataagtgattttcagataaatctagcttttt 4178533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 51923638 - 51923743
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||||||||||||||||||||| |  ||| || ||||  | ||||||||| |||| | |||| |||||||||| ||| ||| |||||||||||||| |||    
T  51923638 aatctaaataagtgattttcacatgcatcaagtttttctttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgttattt 51923737  T
Q  557 gatttt 562  Q
    ||||||    
T  51923738 gatttt 51923743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 574
Target Start/End: Complemental strand, 12947406 - 12947330
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 574  Q
    ||||||||| |||| |||||||| | |||||| ||| |||||||||||||||||||||||||||  | |||||||||    
T  12947406 cgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgt 12947330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 21488019 - 21488073
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta 487  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  21488019 tcttcatctttttctctccatttcaatctaaataagtgactttcacgtagatcta 21488073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 4172474 - 4172535
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  4172474 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttt 4172535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 559
Target Start/End: Original strand, 17237710 - 17237840
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag----ctttttctacgtgatttcatcgtatgagtgcgacgttgtg 528  Q
    ||||||| | |||||||| |||| |||||||||||||||||||||| || || |||     |||||||  ||||||||||| | | |||| |  | | ||    
T  17237710 tcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggtttg 17237809  T
Q  529 tcgtttgtcgtcttgtgcggcgttgtttgat 559  Q
    | |||||||||||||||||||||||||||||    
T  17237810 ttgtttgtcgtcttgtgcggcgttgtttgat 17237840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 585
Target Start/End: Original strand, 36906027 - 36906183
Alignment:
Q  431 cttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtg 528  Q
    ||||||||| |||||||||  |||| ||| |||||||||||||||||| || || ||| |||||  ||  || |||||||| | | |||| |  | | ||    
T  36906027 cttcttcatctttttctctttatttcaatataaataagtgattttcacatagatttaggtttttttctttgtaatttcatcatctaagtgtggtgatttg 36906126  T
Q  529 tcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    | ||| |||||||||||||||||||||||||||  ||||||  |||| |||||||||    
T  36906127 ttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcattt 36906183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 39917563 - 39917502
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||||||||||||| | || |||||||||||||||||||||| || |||||| |||||    
T  39917563 tcttcatatttttctctctaattcaatctaaataagtgattttcacatagatctaggttttt 39917502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 505
Target Start/End: Original strand, 54378808 - 54378881
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtga-ttttcacgtaaatctagctttttctacgtgattt 505  Q
    |||| |||||||||||||||||| ||||||||| ||||| |||||||||| |||||  ||||||| ||||||||    
T  54378808 tcttaatatttttctctccatttcaatctaaatgagtgatttttcacgtagatctaattttttcttcgtgattt 54378881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 562
Target Start/End: Original strand, 8914664 - 8914728
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    ||||||||| |||| | |||||||| |||||| ||| |||||||||||||||| |||||||||||    
T  8914664 cgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgctgtttgatttt 8914728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 598
Target Start/End: Original strand, 32246403 - 32246503
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttga 597  Q
    |||||||||||||| |||||||||  || ||| ||||||||| ||||||| ||||||||||||   ||||||||||   |||||| || |||||| ||||    
T  32246403 cgtgatttcatcgtctgagtgcgaaattatgttgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgctgttcacttggttcctattga 32246502  T
Q  598 a 598  Q
    |    
T  32246503 a 32246503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 556
Target Start/End: Original strand, 4019685 - 4019752
Alignment:
Q  490 tttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtc-ttgtgcggcgttgttt 556  Q
    ||||||| ||||||||| |||| | ||||||||||||||| ||| |||||| ||||||||||||||||    
T  4019685 tttttcttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttt 4019752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 562
Target Start/End: Complemental strand, 21289949 - 21289886
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttt 562  Q
    |||||||| |||| | ||||||||||||||  ||| || |||||||||||||||||||||||||    
T  21289949 gtgatttcgtcgtcttagtgcgacgttgtggtgttcgttgtcttgtgcggcgttgtttgatttt 21289886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 25162344 - 25162473
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag--ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || ||||||   |||||||  ||||||||||| | | |||| |    | |||     
T  25162344 tcttcatctttttctctctatttcaatctaaataagtga-tttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtagtttgtt 25162442  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||| |||||||||||||||||||||||||||    
T  25162443 gttcgtcgtcttgtgcggcgttgtttgattt 25162473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 27706362 - 27706299
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | |||| |||||||||| ||| |||||||||||||||||||||| ||||    
T  27706362 cgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggcgttgtttaattt 27706299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 51487062 - 51487125
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| || | | |||| |||||||||| ||| |||||||||||||||||||||||||||    
T  51487062 cgtgatttcgtcatcttagtgggacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 51487125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 2342399 - 2342453
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta 487  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || |||||    
T  2342399 tcttcatctttttctctctatttcaatctaaataagtgattttcacatatatcta 2342453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 573
Target Start/End: Complemental strand, 4396441 - 4396391
Alignment:
Q  523 gttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||||| ||||||||||||||| |||||||||||||||| || |||||||    
T  4396441 gttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttg 4396391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 3850622 - 3850561
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||||| |||||    
T  3850622 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttt 3850561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 494
Target Start/End: Complemental strand, 25631686 - 25631633
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  25631686 tttttctctctatttcaatctaaataagtgattttcacatagatctaggttttt 25631633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 35499368 - 35499307
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  35499368 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 35499307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 494
Target Start/End: Complemental strand, 38440736 - 38440683
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||||| |||| |||||||||||||||||||||| || |||||| |||||    
T  38440736 tttttctctctatttcaatctaaataagtgattttcacatagatctaggttttt 38440683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 38855204 - 38855143
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| || | |||||||||||||||||||||| || |||||| |||||    
T  38855204 tcttcatctttttctctctatatcaatctaaataagtgattttcacatagatctagattttt 38855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 46934550 - 46934679
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| ||| |||||| |||| |||||||||||||||||||||| || ||| | | |||||||   |||||||||| | | |||| |  | | ||| |    
T  46934550 tcttcatctttctctctctatttcaatctaaataagtgattttcacatagatccaggttttttcttgttgatttcatcatctaagtgtggtggtttgttg 46934649  T
Q  532 tttgtcgtcttgtgcggcgttgtttgattt 561  Q
    || |||||||||||||| ||||||||||||    
T  46934650 ttcgtcgtcttgtgcggtgttgtttgattt 46934679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 569
Target Start/End: Complemental strand, 36734765 - 36734721
Alignment:
Q  525 tgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  36734765 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctt 36734721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 545
Target Start/End: Original strand, 30829892 - 30829995
Alignment:
Q  443 tttctctccattttaatctaaataagtgattttcacgtaaatctagctt-tttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtct 541  Q
    |||||||| |||| |||| |||| || |||||| || || |||||| || ||||  |||||||||||| | |||||| |||||||||| ||||||||| |    
T  30829892 tttctctctatttcaatccaaatgagggattttgacatagatctaggttgtttcatcgtgatttcatcatctgagtgtgacgttgtgttgtttgtcgttt 30829991  T
Q  542 tgtg 545  Q
    ||||    
T  30829992 tgtg 30829995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 561
Target Start/End: Original strand, 21488098 - 21488128
Alignment:
Q  531 gtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||||||||||||||||||||    
T  21488098 gtttgtcgtcttgtgcggcgttgtttgattt 21488128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 574
Target Start/End: Original strand, 25842642 - 25842708
Alignment:
Q  508 tcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 574  Q
    |||| ||||||||||||||||| |||  || |||| |||||  ||||||||||| ||||||||||||    
T  25842642 tcgtttgagtgcgacgttgtgttgttcatcatcttctgcggtattgtttgatttctcgtcttgttgt 25842708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 561
Target Start/End: Complemental strand, 51202321 - 51202291
Alignment:
Q  531 gtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||||||||||||||||||||    
T  51202321 gtttgtcgtcttgtgcggcgttgtttgattt 51202291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 561
Target Start/End: Complemental strand, 53807988 - 53807926
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | |||||||| |||||| ||| |||||||| |||||| |||||||||||    
T  53807988 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttctgcggcattgtttgattt 53807926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 9998427 - 9998480
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  9998427 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 9998480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 10108196 - 10108249
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  10108196 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 10108249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 10233030 - 10233083
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  10233030 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 10233083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 571
Target Start/End: Complemental strand, 25461133 - 25461060
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgt 571  Q
    ||||| ||| |||| |||||||| |||| ||| ||| |||||||| |||| ||||||||||||||  |||||||    
T  25461133 cgtgacttcgtcgtttgagtgcggcgttatgttgttcgtcgtcttatgcgacgttgtttgattttgtgtcttgt 25461060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 32607375 - 32607436
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||  ||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  32607375 tcttcatcattttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 32607436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 36461559 - 36461506
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  36461559 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 36461506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 38545759 - 38545812
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | ||| ||||||||||| ||| ||||||||||||||||||    
T  38545759 gtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtt 38545812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 40487285 - 40487338
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  40487285 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 40487338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 40556672 - 40556725
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||||||||||||||    
T  40556672 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 40556725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 44907566 - 44907505
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||| ||||||||||||| || |||||| |||||    
T  44907566 tcttcatctttttctctttatttcaatctaaacaagtgattttcacatagatctaggttttt 44907505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 47042177 - 47042124
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    |||||||| |||| | ||| ||||||||||| ||| ||||||||||||||||||    
T  47042177 gtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtt 47042124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 50611584 - 50611523
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||  || |||||| |||||    
T  50611584 tcttcatctttttctctatatttcaatctaaataagtgattttcatatagatctaggttttt 50611523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 14464417 - 14464469
Alignment:
Q  435 ttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta 487  Q
    ||||| |||||||||  |||| |||||||||||||||||||||| || |||||    
T  14464417 ttcatctttttctctttatttcaatctaaataagtgattttcacatagatcta 14464469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 531 - 567
Target Start/End: Complemental strand, 24396581 - 24396545
Alignment:
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtc 567  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  24396581 gtttgtcgtcttgtgcgacgttgtttgattttccgtc 24396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 28035053 - 28035183
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || |||||| |||||  ||  ||||||||||| | | |||| |  | | |||     
T  28035053 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 28035152  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||| |||||||||||||||||||||||||||    
T  28035153 gttcgtcgtcttgtgcggcgttgtttgattt 28035183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 441 - 585
Target Start/End: Original strand, 34519055 - 34519200
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgt 539  Q
    |||||||||| |||| |||||||||||||||||||||| || ||||| | |||||||   |||||||||| | | |||| |  | | ||| ||| |||||    
T  34519055 tttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgt 34519154  T
Q  540 cttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
     ||||||||||||||||||||| ||||||| ||||  |||||||||    
T  34519155 tttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcattt 34519200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 51871778 - 51871915
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagc-tttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || ||||||| |||||||  ||||||||||| | | |||| |  | | ||| |    
T  51871778 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctagcttttttctttgtgatttcatcatctaagtgtggtggtttgttg 51871877  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || ||||||||||||| ||||||||| |||| ||||||    
T  51871878 ttcgtcgtcttgtgcgacgttgtttgcttttccgtctt 51871915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 48750100 - 48750204
Alignment:
Q  457 aatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgttt 556  Q
    |||||||||||||||||||||| || ||| || ||||  | |||||||||   || | ||||||||||||||| ||| ||||||||||||| ||||||||    
T  48750100 aatctaaataagtgattttcacatacatcaagtttttctttcgtgatttcgctgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgttt 48750199  T
Q  557 gattt 561  Q
    |||||    
T  48750200 gattt 48750204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 16161794 - 16161857
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| |||| | ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  16161794 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 16161857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 573
Target Start/End: Complemental strand, 18569477 - 18569335
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttt--ttctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| || |||||| |||  |||| ||||||||| || | |||||| |  | |||||     
T  18569477 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttcttcttcgtgatttcgtcatttgagtgtggtggtgtgtt 18569378  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||| ||| |||||| ||| |||||| |||||  ||||||||||    
T  18569377 gttcgtcatcttgtccggtgttgttagatttcccgtcttgttg 18569335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 435 - 561
Target Start/End: Complemental strand, 45426227 - 45426103
Alignment:
Q  435 ttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgttt 534  Q
    ||||| |||||||||| |||| |||||||||||||||||||||| || |||||  ||||| |  ||||||||||| | | |||| |  | | ||| |||     
T  45426227 ttcatctttttctctctatttaaatctaaataagtgattttcacatagatctaagttttttt--gtgatttcatcatctaagtgtggtggtttgttgttc 45426130  T
Q  535 gtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||||||||||||||||    
T  45426129 gtcgtcttgtgcggcgttgtttgattt 45426103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 51868812 - 51868674
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||||| |||||  ||  ||||||||||| | | |||| |  | | |||     
T  51868812 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 51868713  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    ||| ||||||||||||||||||||||| ||| |||||||    
T  51868712 gttcgtcgtcttgtgcggcgttgtttgctttctcgtctt 51868674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 27872653 - 27872790
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatct-agctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||| ||| |||| |||||||||||||||||||||| || |||| || ||||||| ||||||| |||| | | |||| |  | | ||| |    
T  27872653 tcttcatctttttcgctctatttcaatctaaataagtgattttcacatagatctaagttttttcttcgtgattgcatcatctaagtgtggtggtttgttg 27872752  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    || |||||||||| || ||||||||||||||| |||||    
T  27872753 ttcgtcgtcttgttcgacgttgtttgattttttgtctt 27872790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 30818512 - 30818451
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||| ||||||||| |||||    
T  30818512 tcttcatctttttctctctatttcaatctaaataagtgattttcacataaatctagtttttt 30818451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 561
Target Start/End: Original strand, 3871325 - 3871452
Alignment:
Q  435 ttcatatttttctctccattttaatctaaataagtgattttcacgtaaatct-agctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtt 533  Q
    ||||| ||| |||||| |||| |||||||||||||||||||||| || |||| || |||||||  ||||||||||| | | |||| |  | | ||| |||    
T  3871325 ttcatctttctctctcaatttcaatctaaataagtgattttcacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 3871424  T
Q  534 tgtcgtcttgtgcggcgttgtttgattt 561  Q
     |||||||||||| ||||||||||||||    
T  3871425 cgtcgtcttgtgcagcgttgtttgattt 3871452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 484
Target Start/End: Complemental strand, 5324724 - 5324673
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaat 484  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  5324724 tcttcatctttttctctctatttcaatctaaataagtgattttcacgtaaat 5324673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 32679227 - 32679164
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||||||||| |||||||| |||||||| ||| ||| ||||||||||||| |||||||||    
T  32679227 cgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgattt 32679164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 590
Target Start/End: Original strand, 12635148 - 12635222
Alignment:
Q  516 gtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttc 590  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||| ||| |||| ||  ||||||||| ||||    
T  12635148 gtgcggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttc 12635222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 573
Target Start/End: Original strand, 4396914 - 4397026
Alignment:
Q  463 aataagtgattttcacgtaaatctagcttt--ttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatt 560  Q
    |||||||||||||||  ||||||||| |||  ||||  |||||||| |||| ||||||||||| ||||| |||||||||||| || |   ||||||||||    
T  4396914 aataagtgattttcatataaatctaggtttatttctttgtgatttcgtcgtttgagtgcgacgatgtgttgtttgtcgtcttatgtgatattgtttgatt 4397013  T
Q  561 tttcgtcttgttg 573  Q
    | ||||| |||||    
T  4397014 tctcgtcatgttg 4397026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 20266216 - 20266277
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||||||||||    
T  20266216 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagcttttt 20266277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 509
Target Start/End: Complemental strand, 38520700 - 38520623
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatc 509  Q
    ||||||| |||||||||| ||||  ||||||||||||||||||||| || ||||| | ||||||| ||||||||||||    
T  38520700 tcttcatctttttctctctatttcgatctaaataagtgattttcacatagatctatgttttttcttcgtgatttcatc 38520623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 560
Target Start/End: Original strand, 14545434 - 14545562
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 531  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||| | |||||||  ||||||||||| | | |||| |  | | ||| |    
T  14545434 tcttcatctttttctctatatttcaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 14545533  T
Q  532 tttgtcgtcttgtgcggcgttgtttgatt 560  Q
    || ||||||||||||| || |||||||||    
T  14545534 ttcgtcgtcttgtgcgacgctgtttgatt 14545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 574
Target Start/End: Original strand, 5855833 - 5855959
Alignment:
Q  447 tctccattttaatctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgc 546  Q
    |||| |||||||||||||||| || |||| || || |||||  ||||| ||  ||||||  |||| | ||| ||||||||||| | ||||| ||||||||    
T  5855833 tctctattttaatctaaataattgttttttacatatatctaattttttttaa-tgattttgtcgtctaagtacgacgttgtgttgcttgtcatcttgtgc 5855931  T
Q  547 ggcgttgtttgatttttcgtcttgttgt 574  Q
    | | |||||||||||| |||||||||||    
T  5855932 gacattgtttgattttacgtcttgttgt 5855959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 573
Target Start/End: Complemental strand, 31692598 - 31692523
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||||||  |||| |||||| ||| ||| || |||||||||||||||||| ||||||||||||| | ||||||||    
T  31692598 cgtgattttgtcgtctgagtgtgacattgcgttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttg 31692523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 34413226 - 34413163
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||  |||| | |||||||| |||||| ||| |||||||||||||||||||||||||||    
T  34413226 cgtgattttgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgattt 34413163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 573
Target Start/End: Original strand, 47132863 - 47132938
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||||||| |||| |||||| | |||||||| ||| ||||| |||||||||||||||| ||||  ||||||||||    
T  47132863 cgtgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttg 47132938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 561
Target Start/End: Original strand, 19060871 - 19060933
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | |||||||| |||||| ||| ||||||||||| |||||||||||||||    
T  19060871 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtggcgttgtttgattt 19060933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 567
Target Start/End: Original strand, 19723247 - 19723383
Alignment:
Q  433 tcttcatattttt-ctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgt 529  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||| || |||||| |||||  ||  ||||||||||| | | |||| |  | | |||    
T  19723247 tcttcatattttttctctctattc-aatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgt 19723345  T
Q  530 cgtttgtcgtcttgtgcggcgttgtttgatttttcgtc 567  Q
     ||| |||||||| ||||||||||||||||||| ||||    
T  19723346 tgttcgtcgtcttctgcggcgttgtttgattttccgtc 19723383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 30878989 - 30879043
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta 487  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||| || |||||    
T  30878989 tcttcatctttttctctttattttaatctaaataagtgattttcacatagatcta 30879043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 561
Target Start/End: Original strand, 49626875 - 49626937
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| |  ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  49626875 gtgatttcgtcgtctatgtgcgaccttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 49626937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 561
Target Start/End: Original strand, 7997699 - 7997833
Alignment:
Q  431 cttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag----ctttttctacgtgatttcatcgtatgagtgcgacgttg 526  Q
    ||||||||| |||||||||  |||| ||| |||||||||||||||||| || ||||||     |||||||  || |||||||| | | |||| |  | |     
T  7997699 cttcttcatctttttctctttatttcaatataaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatt 7997798  T
Q  527 tgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||| ||| |||||||||||||||||||||||||||    
T  7997799 tgttgttcgtcgtcttgtgcggcgttgtttgattt 7997833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 9172402 - 9172463
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||||| || |||||| |||||    
T  9172402 tcttcatatttttttctctatttcaatctaaataagtgactttcacatagatctaggttttt 9172463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 9180384 - 9180445
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||||| || |||||| |||||    
T  9180384 tcttcatatttttttctctatttcaatctaaataagtgactttcacatagatctaggttttt 9180445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 25406451 - 25406390
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||| || |||||| |||||    
T  25406451 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttt 25406390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 25728126 - 25728065
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  25728126 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 25728065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 35584788 - 35584727
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || |||||| |||||    
T  35584788 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttt 35584727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 40646602 - 40646663
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| ||||||| |  |||| ||||||||||||||||||||||||| |||||| |||||    
T  40646602 tcttcatctttttctatttatttcaatctaaataagtgattttcacgtagatctaggttttt 40646663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 40881180 - 40881119
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||||| |||||||||| |||| ||||||||| |||||||||||| || |||||| |||||    
T  40881180 tcttcatctttttctctctatttcaatctaaatgagtgattttcacttagatctaggttttt 40881119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 50148286 - 50148347
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    |||||||  ||||||||  ||||||||||||||||||||||||||| || |||||| |||||    
T  50148286 tcttcatccttttctctttattttaatctaaataagtgattttcacatagatctaggttttt 50148347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 598
Target Start/End: Complemental strand, 50166258 - 50166099
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcg 538  Q
    ||||||| || |||| ||||||||||||||| |||||| || || ||| |||||  ||| ||||||||||| | | |||| |  | | ||| ||| ||||    
T  50166258 tttttctatctatttcaatctaaataagtgaatttcacatagatttaggtttttttctatgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 50166159  T
Q  539 tcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttccttttgaa 598  Q
    |||||||||||||| |||| ||| ||||||| |||   |||||||||  ||||| |||||    
T  50166158 tcttgtgcggcgttatttgctttctcgtcttcttgcggtgttcattttattcctattgaa 50166099  T

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Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 5701171 - 5701303
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag----ctttttctacgtgatttcatcgtatgagtgcgacgttgtg 528  Q
    ||||||| |||||||||  |||| ||| |||||||||||||||||| || ||||||     |||||||  || |||||||| | | |||| |  | | ||    
T  5701171 tcttcatctttttctctttatttcaatttaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatttg 5701270  T
Q  529 tcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    | ||| |||||||||||||||||||||||||||    
T  5701271 ttgttcgtcgtcttgtgcggcgttgtttgattt 5701303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 561
Target Start/End: Original strand, 24582872 - 24582974
Alignment:
Q  458 atctaaataagtgattttcacgtaaatctagctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttg 557  Q
    |||||||||||||||||||||  | ||| ||| ||||||  |||||||  |||| | |||| ||| |||||| |||  ||| ||||||||||||||||||    
T  24582872 atctaaataagtgattttcacaaatatcaagcgttttctt-gtgattttgtcgtctaagtgtgaccttgtgttgttcatcgccttgtgcggcgttgtttg 24582970  T
Q  558 attt 561  Q
    ||||    
T  24582971 attt 24582974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 36775846 - 36775783
Alignment:
Q  498 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    ||||||||| || | | ||||||||||||||| ||| |||||||||||| | ||||||||||||    
T  36775846 cgtgatttcttcattttagtgcgacgttgtgttgttcgtcgtcttgtgcagtgttgtttgattt 36775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 590
Target Start/End: Original strand, 41994388 - 41994479
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttc 590  Q
    ||||||||| ||| ||| |||| |||||||| |||  ||||||||||| ||||||||||||||    |||||||||  ||||| ||||||||    
T  41994388 gtgatttcaacgtctgaatgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttc 41994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 487
Target Start/End: Complemental strand, 45805977 - 45805922
Alignment:
Q  432 ttcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta 487  Q
    |||||| | |||||||||| |||| ||||||||||||||| |||||| ||||||||    
T  45805977 ttcttcctctttttctctctatttcaatctaaataagtgactttcacataaatcta 45805922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 7312265 - 7312191
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttc 506  Q
    ||||||| |||||||||| |||| ||  ||||||| ||||||||||||| ||||| | ||||||| |||||||||    
T  7312265 tcttcatctttttctctctatttcaaattaaataaatgattttcacgtagatctaggttttttcttcgtgatttc 7312191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 475
Target Start/End: Original strand, 9919303 - 9919345
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgatttt 475  Q
    ||||||| |||||||||| |||| |||||||||||||||||||    
T  9919303 tcttcatctttttctctctatttcaatctaaataagtgatttt 9919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 15397336 - 15397458
Alignment:
Q  452 attttaatctaaataagtgattttcacgtaaatctagctttt-tctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcg 550  Q
    |||||||| |||||||||||||||||| ||||| | | |||| |||  |||||||| |||| |||||||| |  ||||| |||| || |||| | || |     
T  15397336 attttaatataaataagtgattttcacataaatttggattttgtctctgtgatttcgtcgtctgagtgcggctatgtgttgtttatcatcttatacgcca 15397435  T
Q  551 ttgtttgatttttcgtcttgttg 573  Q
    ||||||| || ||||||||||||    
T  15397436 ttgtttggttcttcgtcttgttg 15397458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 569
Target Start/End: Complemental strand, 35584681 - 35584647
Alignment:
Q  535 gtcgtcttgtgcggcgttgtttgatttttcgtctt 569  Q
    |||||||||||||||||||||||||||| ||||||    
T  35584681 gtcgtcttgtgcggcgttgtttgattttccgtctt 35584647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 561
Target Start/End: Original strand, 44543234 - 44543296
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgattt 561  Q
    |||||||| |||| | |||||||| |||||| ||| ||||| || ||||||||||||||||||    
T  44543234 gtgatttcgtcgtctaagtgcgactttgtgttgttcgtcgtattatgcggcgttgtttgattt 44543296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 552
Target Start/End: Complemental strand, 7836924 - 7836871
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgtt 552  Q
    ||||||||||||| | |||||| |||||||| ||| ||||||||||||| ||||    
T  7836924 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt 7836871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 11453862 - 11453979
Alignment:
Q  445 tctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttg 543  Q
    |||||| |||| |||||||||||||| ||||||| || ||||| | |||||||  ||||||||||| | | |||| |  | | ||| ||| |||||||||    
T  11453862 tctctctatttcaatctaaataagtggttttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttg 11453961  T
Q  544 tgcggcgttgtttgattt 561  Q
    ||| ||| ||||||||||    
T  11453962 tgcagcgctgtttgattt 11453979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 478
Target Start/End: Complemental strand, 19716064 - 19716019
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcac 478  Q
    ||||||| |||||||||  |||| ||||||||||||||||||||||    
T  19716064 tcttcatctttttctctttatttcaatctaaataagtgattttcac 19716019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 39927627 - 39927579
Alignment:
Q  525 tgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    ||||| ||| ||||||||||| |||||||||||||||  ||||||||||    
T  39927627 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttg 39927579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 585
Target Start/End: Complemental strand, 201530 - 201385
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctag-ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgt 539  Q
    |||||||||  |||| |||||||||||||||||||||| || ||||||  |||||||  ||||||||||| | | |||| || | | ||| ||| || ||    
T  201530 tttttctctatatttcaatctaaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgtagt 201431  T
Q  540 cttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    ||||||||||| ||||||||||  |||||| ||||  |||||||||    
T  201430 cttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcattt 201385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 573
Target Start/End: Original strand, 453851 - 453984
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgt 539  Q
    |||||||||  |||||||| |||||||||||||||||| || || || | ||||||| ||||||||| |  | ||| || || | ||||| ||| |||||    
T  453851 tttttctctttattttaatttaaataagtgattttcacatatatttacgttttttcttcgtgatttcgttatttgattgtgatggtgtgttgttcgtcgt 453950  T
Q  540 cttgtgcggcgttgtttgatttttcgtcttgttg 573  Q
    |||| ||||||||||||||||||  |||||||||    
T  453951 cttgggcggcgttgtttgattttcagtcttgttg 453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 441 - 559
Target Start/End: Complemental strand, 9779 - 9659
Alignment:
Q  441 tttttctctccattttaatctaaataagtgattttcacgtaaatctag---ctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtc 537  Q
    ||||||||||||||||||| |||||||||| |||| || || ||||||    ||||||| ||||||||| |||| | | |||| ||||||   |||||||    
T  9779 tttttctctccattttaatataaataagtggttttgacatatatctagattttttttcttcgtgatttcgtcgtctaaatgcgtcgttgttgtgtttgtc 9680  T
Q  538 gtcttgtgcggcgttgtttgat 559  Q
    || |||||||||||||||||||    
T  9679 gt-ttgtgcggcgttgtttgat 9659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 559
Target Start/End: Complemental strand, 16489 - 16359
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctag----ctttttctacgtgatttcatcgtatgagtgcgacgttgtg 528  Q
    ||||||| | |||||||| |||| |||||||||||||||||||||| || || |||     |||||||  ||||||||||| | | |||| |  | | ||    
T  16489 tcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggtttg 16390  T
Q  529 tcgtttgtcgtcttgtgcggcgttgtttgat 559  Q
    | |||||||||||||||||||||||||||||    
T  16389 ttgtttgtcgtcttgtgcggcgttgtttgat 16359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 590
Target Start/End: Original strand, 5988 - 6079
Alignment:
Q  499 gtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcatttcgttc 590  Q
    |||||||| |||| ||||||| | | ||||| ||| |||||||||||||||||||||||||||  ||| ||||||   ||||||||| ||||    
T  5988 gtgatttcgtcgtctgagtgcaatgatgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttc 6079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 500 - 559
Target Start/End: Original strand, 93065 - 93124
Alignment:
Q  500 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgat 559  Q
    ||||||| |||| |||||||  |||||||| |||||| ||||||||||||||||||||||    
T  93065 tgatttcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgat 93124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 585
Target Start/End: Original strand, 5308 - 5462
Alignment:
Q  433 tcttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt--ctacgtgatttcatcgtatgagtgcgacgttgtgtc 530  Q
    ||||||| ||| |||||| | || ||||||||||||||| ||| || || |||||  |||||  ||  ||||||||||| | | |||| || | | |||     
T  5308 tcttcatctttctctctctacttcaatctaaataagtgacttttacatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgtt 5407  T
Q  531 gtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgtattgttcattt 585  Q
    ||| ||||||||||||||||||||||| |||  |||||| ||||  |||||||||    
T  5408 gttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattt 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 494
Target Start/End: Original strand, 8632 - 8691
Alignment:
Q  435 ttcatatttttctctccattttaatctaaataagtgattttcacgtaaatctagcttttt 494  Q
    ||||| ||||| |||| |||| |||||||||||||||||||||| || |||||| |||||    
T  8632 ttcatctttttatctctatttcaatctaaataagtgattttcacatagatctaggttttt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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