View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21435_low_42 (Length: 226)
Name: NF21435_low_42
Description: NF21435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21435_low_42 |
 | |
|
| [»] chr3 (13 HSPs) |
| |
|
| [»] scaffold0554 (1 HSPs) |
| |
|
| [»] chr6 (1 HSPs) |
| |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 23036200 - 23036423
Alignment:
| Q |
3 |
ttactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcat |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23036200 |
ttactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcat |
23036299 |
T |
|
| Q |
103 |
ttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaacct |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23036300 |
ttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaacct |
23036399 |
T |
|
| Q |
203 |
cagggtttctttgacgactgattt |
226 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
23036400 |
cagggtttctttgacgactgattt |
23036423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 23039069 - 23039291
Alignment:
| Q |
1 |
aattactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagc |
100 |
Q |
| |
|
||||||| ||||| |||||||| |||||||| | ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23039069 |
aattacttcctttatagtcaatggcgctgtcaaggaatctctctggataaaatctctccggctcagtccagtaatttggatctcttgcaattgcccaagc |
23039168 |
T |
|
| Q |
101 |
atttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaac |
200 |
Q |
| |
|
||| | | | |||||||||||||||||||||||||||||||||||| |||||| |||| ||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23039169 |
attgactatcaccttactcttaataggtatgtgataaccatttatctcacatgtttgacgacattctcttggcagcaaaagaggtgttggagggtgtaac |
23039268 |
T |
|
| Q |
201 |
ctcagggtttctttgacgactga |
223 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
23039269 |
ctcagggtttctttgacaactga |
23039291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 23017092 - 23017315
Alignment:
| Q |
3 |
ttactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcat |
102 |
Q |
| |
|
||||||||||| ||||||||| || |||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
23017092 |
ttactccctttatagtcaataccgttgtcaatgaatctctctggataaaacttctctggttcagtccagtagtttggatctcttgcgattgcccaagcat |
23017191 |
T |
|
| Q |
103 |
ttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaacct |
202 |
Q |
| |
|
| ||| | |||||| |||||| |||||||||||||||| |||| ||||||||| | |||| ||||||||||||||||||||| || ||| ||||| || |
|
|
| T |
23017192 |
taattatcaccttagtcttaactggtatgtgataaccatgtatctcacatgctttaccacattctcttggtagcaaaagaggtactgaaggatgtaatct |
23017291 |
T |
|
| Q |
203 |
cagggtttctttgacgactgattt |
226 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
23017292 |
aagggtttctttgacaactgattt |
23017315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 23145950 - 23146173
Alignment:
| Q |
3 |
ttactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcat |
102 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
23145950 |
ttactccctttatagtcaatatcgctgtcgatgaatctctctggataaaacctctctggttcagtccagtagtttggatctcttgcaactgcccaagcat |
23146049 |
T |
|
| Q |
103 |
ttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaacct |
202 |
Q |
| |
|
| | | |||||| ||||||| |||||||||||||||||||| ||||| ||||| ||| ||||| |||| ||||||||||| ||||||||||| ||| |
|
|
| T |
23146050 |
tgactaacaccttagtcttaatcggtatgtgataaccatttatatcacattcttgactacattctctcggtaacaaaagaggtgctggagggtgtagcct |
23146149 |
T |
|
| Q |
203 |
cagggtttctttgacgactgattt |
226 |
Q |
| |
|
| |||||||||||| ||| |||| |
|
|
| T |
23146150 |
taaggtttctttgacaactaattt |
23146173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 51 - 226
Target Start/End: Original strand, 23032777 - 23032952
Alignment:
| Q |
51 |
aatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcatttattgttaccttactcttaataggtatgtgataaccatttatcacac |
150 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | | |||||||| ||||| ||||||||||||||||||||| ||| |
|
|
| T |
23032777 |
aatctctctggttcagtccagtagtttggatctcttgcaattgcccaagcattgactatcaccttacttttaattggtatgtgataaccatttatctcac |
23032876 |
T |
|
| Q |
151 |
atgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaacctcagggtttctttgacgactgattt |
226 |
Q |
| |
|
|||||||| | || ||||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
23032877 |
atgcttgaccgcattctcttggtagcaaaagaggtactgtagggtggaacctaagggtttctttgacgactgattt |
23032952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 23148788 - 23149011
Alignment:
| Q |
3 |
ttactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcat |
102 |
Q |
| |
|
||||||||||| ||||||||| |||| || ||||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
23148788 |
ttactccctttatagtcaatatcgctttcaatgaatctctctggataaaacctctctggttcagtccagtagtttgaatctcttgcaattgcccaagcat |
23148887 |
T |
|
| Q |
103 |
ttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaacct |
202 |
Q |
| |
|
| ||| | || ||| ||||||| || ||||||||||||||||| |||| |||||| ||| ||||| |||| ||||||||||| |||||||||| ||| |
|
|
| T |
23148888 |
tgattatcactttagtcttaatcggaatgtgataaccatttatatcacacgcttgactacattctctcggtaacaaaagaggtgccggagggtgtagcct |
23148987 |
T |
|
| Q |
203 |
cagggtttctttgacgactgattt |
226 |
Q |
| |
|
| |||||||||||| ||| |||| |
|
|
| T |
23148988 |
taaggtttctttgacaactaattt |
23149011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 23024302 - 23024525
Alignment:
| Q |
3 |
ttactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcat |
102 |
Q |
| |
|
||||||||||| ||||||||| | || |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23024302 |
ttactccctttatagtcaatatcactatcgatgaatctctctggataaaacctctctggttcggtccagtaatttggatctcttgcaattgcccaagcat |
23024401 |
T |
|
| Q |
103 |
ttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaacct |
202 |
Q |
| |
|
| | | | |||||| ||||| | || |||| |||||| | |||| ||||| |||| |||| ||||| |||| ||||| |||| |||||||||||||| |
|
|
| T |
23024402 |
tgactatcaccttagtcttagttggaatgtcataaccgtctatcttacatgattgagcacattctctcggtattaaaagtggtgccggagggtgtaacct |
23024501 |
T |
|
| Q |
203 |
cagggtttctttgacgactgattt |
226 |
Q |
| |
|
||||||||||||||| | |||||| |
|
|
| T |
23024502 |
cagggtttctttgacaattgattt |
23024525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 23140078 - 23140299
Alignment:
| Q |
5 |
actccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcattt |
104 |
Q |
| |
|
||||||||| |||||||||| | | | ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||| || |||||||| ||||| |
|
|
| T |
23140078 |
actccctttatagtcaatagtgtttcccatgaatctctctggataaaatttctctggttcagtccagtagtttggatctctcgcgattgcccatgcattg |
23140177 |
T |
|
| Q |
105 |
attgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaacctca |
204 |
Q |
| |
|
| |||||| |||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
23140178 |
acgaccaccttagtcttaaatggtatgtgataaccatgtatctcacatgcttgaccacactctcttggtagcaaaagaggcaccggagtgtgtaacctca |
23140277 |
T |
|
| Q |
205 |
gggtttctttgacgactgattt |
226 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
23140278 |
aggtttctttgacgattgattt |
23140299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 22946467 - 22946588
Alignment:
| Q |
36 |
aatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcatttattgttaccttactcttaataggtatgtgat |
135 |
Q |
| |
|
||||| || |||||||| | ||||| |||||||| || |||||||| ||| |||||||||||||||| ||| | ||| |||| || || |||||||||| |
|
|
| T |
22946467 |
aatctttcaggataaaacttatctggatcagtccaatattttggatcccttccaattgcccaagcattgattatcaccctactattgattggtatgtgat |
22946566 |
T |
|
| Q |
136 |
aaccatttatcacacatgcttg |
157 |
Q |
| |
|
|||||| ||| |||||||||| |
|
|
| T |
22946567 |
aaccatcaatctcacatgcttg |
22946588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 22972014 - 22972162
Alignment:
| Q |
36 |
aatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcatttattgttaccttactcttaataggtatgtgat |
135 |
Q |
| |
|
||||| || |||||||| | ||||| |||||||| || |||||||| ||| |||||||||||||||| ||| | ||| |||| || || |||||||||| |
|
|
| T |
22972014 |
aatctttcaggataaaacttatctggatcagtccaatattttggatcccttccaattgcccaagcattgattatcaccctacttttgattggtatgtgat |
22972113 |
T |
|
| Q |
136 |
aaccatttatcacacatgcttgaacacactctcttggtagcaaaagagg |
184 |
Q |
| |
|
|||||| ||| |||| ||||| ||||| | ||||||| |||||||| |
|
|
| T |
22972114 |
aaccatcaatctcacaagcttgtccacacacccttggtactaaaagagg |
22972162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 22941502 - 22941367
Alignment:
| Q |
45 |
ggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcatttattgttaccttactcttaataggtatgtgataaccattta |
144 |
Q |
| |
|
||||||||||||||||| ||| ||| | ||||||||||||| |||| ||||||||||| | | | || || || |||| |||||| | ||| ||||||| |
|
|
| T |
22941502 |
ggataaaatctctctgggtcatcccaatgatttggatctcttccaatggcccaagcattcactatcactttgcttttaaaaggtatatcatacccattta |
22941403 |
T |
|
| Q |
145 |
tcacacatgcttgaacacactctcttggtagcaaaa |
180 |
Q |
| |
|
| |||||||||| |||| |||||||| ||||||| |
|
|
| T |
22941402 |
tttcacatgcttgtccacattctcttggaagcaaaa |
22941367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 22831895 - 22832042
Alignment:
| Q |
33 |
atgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcatttattgttaccttactcttaataggtatgt |
132 |
Q |
| |
|
|||||||| || ||||||||||| ||||| || ||| | ||||||||||||| |||| ||||||||||| | | | || || || |||| |||||| | |
|
|
| T |
22831895 |
atgaatctttcaggataaaatctttctgggtcgtcccaatgatttggatctcttccaatagcccaagcattcactatcactttgcttttaaaaggtatat |
22831994 |
T |
|
| Q |
133 |
gataaccatttatcacacatgcttgaacacactctcttggtagcaaaa |
180 |
Q |
| |
|
||| ||||||||| ||||||||| |||| |||||||| ||||||| |
|
|
| T |
22831995 |
catacccatttatctcacatgcttttccacattctcttggaagcaaaa |
22832042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 22916816 - 22916741
Alignment:
| Q |
28 |
tgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcatt |
103 |
Q |
| |
|
|||||||||| || || ||||||||||| ||||| ||| ||| | ||||||||||||| |||| ||||||||||| |
|
|
| T |
22916816 |
tgtcgatgaacctttcaggataaaatctttctggatcatcccaattatttggatctcttccaatggcccaagcatt |
22916741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0554 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0554
Description:
Target: scaffold0554; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6726 - 6501
Alignment:
| Q |
1 |
aattactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagc |
100 |
Q |
| |
|
|||||| |||||| |||||||||| |||||| |||||||||| |||||||| |||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
6726 |
aattaccccctttatagtcaatagtgctgtcagtgaatctctctggataaaacctctctggttcagtccagaagtttggatctcttgcaattgcccaagc |
6627 |
T |
|
| Q |
101 |
atttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaac |
200 |
Q |
| |
|
||| ||| | ||||||||| ||| ||||||| ||||||||||||| ||||||||| | |||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6626 |
attgattatcaccttactcctaaacggtatgttataaccatttatctcacatgctttaccacattctcttggtagcaaaagaggtgctggagggtgtaac |
6527 |
T |
|
| Q |
201 |
ctcagggtttctttgacgactgattt |
226 |
Q |
| |
|
|| ||||||||||||||||||||||| |
|
|
| T |
6526 |
ctaagggtttctttgacgactgattt |
6501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 21779841 - 21780066
Alignment:
| Q |
1 |
aattactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagc |
100 |
Q |
| |
|
||||||||||||| |||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
21779841 |
aattactccctttaaagtcaatatcgctatcgatgaatctctctggataaaacatctctggttcagtccagtagtttggatctcttgcaattgcccaagc |
21779940 |
T |
|
| Q |
101 |
atttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaac |
200 |
Q |
| |
|
||| ||| | |||||| ||||||| || ||||| ||||||||||| ||||||||||| ||| ||||| |||| ||||||||||| ||||||||||| | |
|
|
| T |
21779941 |
attgattatcaccttagtcttaatcggaatgtggtaaccatttatatcacatgcttgactacattctctcggtaacaaaagaggtgctggagggtgtagc |
21780040 |
T |
|
| Q |
201 |
ctcagggtttctttgacgactgattt |
226 |
Q |
| |
|
|| | |||||||||||| |||||||| |
|
|
| T |
21780041 |
cttaaggtttctttgacaactgattt |
21780066 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15885934 - 15885712
Alignment:
| Q |
1 |
aattactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagc |
100 |
Q |
| |
|
||||| ||||||| |||||||||| ||| | ||||||||||| |||||||| ||||||||||||||||| || |||||||||||| |||| ||||| || |
|
|
| T |
15885934 |
aattattccctttatagtcaatagagctaccaatgaatctctctggataaaacctctctggttcagtccaatactttggatctcttccaatcgcccatgc |
15885835 |
T |
|
| Q |
101 |
atttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaac |
200 |
Q |
| |
|
||| | | | ||||| || || | ||||| |||||||||| ||| |||||||||| |||| |||||||| || |||||||| | ||||||||||||| |
|
|
| T |
15885834 |
attgactatcaccttgcttttggttggtatatgataaccatcaatctcacatgcttgttcacattctcttggaagtaaaagaggagctggagggtgtaac |
15885735 |
T |
|
| Q |
201 |
ctcagggtttctttgacgactga |
223 |
Q |
| |
|
|| | ||| ||||| || ||||| |
|
|
| T |
15885734 |
cttaaggtctctttcacaactga |
15885712 |
T |
|
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Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 12609933 - 12610155
Alignment:
| Q |
1 |
aattactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagc |
100 |
Q |
| |
|
||||| |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||| ||||| || |
|
|
| T |
12609933 |
aattattccctttgtagtcaatagagctaccgatgaatctctccggataaaacttctctggttcagtccagtactttggatctcttccaatcgcccatgc |
12610032 |
T |
|
| Q |
101 |
atttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttggtagcaaaagaggtgttggagggtgtaac |
200 |
Q |
| |
|
||| | | | ||||| || || || ||||| |||| |||| ||| |||||||||| |||| |||||||| || |||||||| |||||| |||||| |
|
|
| T |
12610033 |
attgactatcaccttgcttttgattggtatacgatacccatcaatctcacatgcttgtccacattctcttggaagtaaaagaggacctggaggatgtaac |
12610132 |
T |
|
| Q |
201 |
ctcagggtttctttgacgactga |
223 |
Q |
| |
|
|| | ||| ||||| || ||||| |
|
|
| T |
12610133 |
cttaaggtctctttcacaactga |
12610155 |
T |
|
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Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 12637037 - 12637146
Alignment:
| Q |
9 |
cctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcatttattg |
108 |
Q |
| |
|
|||||||||||||||| ||| | ||||||||||| |||| ||| |||||||||||||||||||| ||||||||||| |||||| ||| ||||||| | |
|
|
| T |
12637037 |
cctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagtactttggatctctaccaattgtccatgcatttacta |
12637136 |
T |
|
| Q |
109 |
ttaccttact |
118 |
Q |
| |
|
| |||||||| |
|
|
| T |
12637137 |
tcaccttact |
12637146 |
T |
|
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Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 62181 - 62283
Alignment:
| Q |
1 |
aattactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagc |
100 |
Q |
| |
|
||||| |||| ||||||||||||| || | ||||||||||| |||||||| ||||||||||| |||||||| ||||||||||| | |||||||| || |
|
|
| T |
62181 |
aattattcccgttgtagtcaatagaactaccaatgaatctctctggataaaacctctctggttccgtccagtaccttggatctcttccgattgcccatgc |
62280 |
T |
|
| Q |
101 |
att |
103 |
Q |
| |
|
||| |
|
|
| T |
62281 |
att |
62283 |
T |
|
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Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 5594170 - 5594023
Alignment:
| Q |
33 |
atgaatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcatttattgttaccttactcttaataggtatgt |
132 |
Q |
| |
|
|||||||| || ||||||||||| ||||| || ||| | ||||||||||||| |||| ||||||||||| | | | || || || |||| |||||| | |
|
|
| T |
5594170 |
atgaatctttcaggataaaatctttctgggtcgtcccaatgatttggatctcttccaatagcccaagcattcactatcactttgcttttaaaaggtatat |
5594071 |
T |
|
| Q |
133 |
gataaccatttatcacacatgcttgaacacactctcttggtagcaaaa |
180 |
Q |
| |
|
||| ||||||||| ||||||||| |||| |||||||| ||||||| |
|
|
| T |
5594070 |
catacccatttatctcacatgcttttccacattctcttggaagcaaaa |
5594023 |
T |
|
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