View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21436_high_1 (Length: 238)
Name: NF21436_high_1
Description: NF21436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21436_high_1 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 222
Target Start/End: Complemental strand, 22497946 - 22497739
Alignment:
| Q |
15 |
atgaacttttacaatcacagaaatgccaatatccattaatctaaccttatgttggaaatcctttacttgctgagatcacaggtgtgccatgatagcaatt |
114 |
Q |
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| T |
22497946 |
atgaacttttacaatcacagaaatgccaatatccattaatctaaccttatgttggaaatcctttacttgctgagatcacaggtgtgccatgatagcaatt |
22497847 |
T |
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| Q |
115 |
gaagtagtctcagcaaaaggatggtctaaccttatgttggaaactgagtcattgcttattttaaaggccttctcttatatttgatatagttccttggaag |
214 |
Q |
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| T |
22497846 |
gaagtagtctcagcaaaaggatggtctaaccttatgttggaaactgagtcattgcttattttaaaggccttctcttatatttgatatagttccttggaag |
22497747 |
T |
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| Q |
215 |
atagaaat |
222 |
Q |
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| T |
22497746 |
atagaaat |
22497739 |
T |
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