View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21437_high_17 (Length: 306)

Name: NF21437_high_17
Description: NF21437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21437_high_17
NF21437_high_17
[»] chr1 (18 HSPs)
chr1 (16-296)||(32505819-32506098)
chr1 (52-296)||(13495989-13496234)
chr1 (54-296)||(10764921-10765165)
chr1 (54-296)||(13493264-13493508)
chr1 (54-296)||(39546244-39546486)
chr1 (184-296)||(34066346-34066460)
chr1 (52-296)||(16190177-16190421)
chr1 (55-296)||(1936628-1936873)
chr1 (219-296)||(27282274-27282351)
chr1 (54-135)||(34552438-34552519)
chr1 (54-135)||(49716653-49716735)
chr1 (184-249)||(8435284-8435351)
chr1 (67-155)||(15297471-15297559)
chr1 (260-296)||(22456700-22456736)
chr1 (260-296)||(49147899-49147935)
chr1 (57-135)||(49720135-49720214)
chr1 (52-92)||(20981673-20981714)
chr1 (64-135)||(18392675-18392747)
[»] chr5 (14 HSPs)
chr5 (54-296)||(14616429-14616672)
chr5 (54-296)||(7649942-7650185)
chr5 (54-296)||(34405850-34406094)
chr5 (57-296)||(33575091-33575331)
chr5 (54-281)||(15532200-15532429)
chr5 (56-281)||(15542384-15542611)
chr5 (219-296)||(22159746-22159823)
chr5 (184-295)||(11988995-11989108)
chr5 (53-172)||(21680602-21680722)
chr5 (54-135)||(33921378-33921459)
chr5 (54-172)||(2499762-2499882)
chr5 (61-135)||(1810197-1810272)
chr5 (54-92)||(25185703-25185741)
chr5 (52-92)||(26727260-26727301)
[»] chr7 (20 HSPs)
chr7 (54-296)||(6967149-6967393)
chr7 (54-296)||(24783410-24783654)
chr7 (54-296)||(17866353-17866597)
chr7 (53-296)||(36842936-36843181)
chr7 (54-296)||(9765803-9766046)
chr7 (161-296)||(17863202-17863338)
chr7 (138-296)||(36222392-36222552)
chr7 (54-169)||(17857880-17857996)
chr7 (54-296)||(23759609-23759852)
chr7 (198-296)||(23313406-23313504)
chr7 (203-296)||(23107989-23108082)
chr7 (124-293)||(11279496-11279667)
chr7 (53-296)||(294866-295107)
chr7 (124-296)||(46846381-46846556)
chr7 (198-297)||(3862052-3862151)
chr7 (124-296)||(33312996-33313171)
chr7 (54-172)||(3540924-3541042)
chr7 (54-135)||(38431675-38431757)
chr7 (52-97)||(5796851-5796896)
chr7 (53-92)||(23598527-23598567)
[»] chr6 (21 HSPs)
chr6 (54-296)||(14790620-14790864)
chr6 (53-296)||(14795648-14795893)
chr6 (54-296)||(1838475-1838720)
chr6 (62-296)||(19664674-19664909)
chr6 (62-294)||(15540574-15540806)
chr6 (54-296)||(13017189-13017433)
chr6 (54-296)||(27649104-27649346)
chr6 (217-296)||(20527328-20527407)
chr6 (62-296)||(15535058-15535292)
chr6 (54-296)||(32427303-32427544)
chr6 (54-296)||(22221726-22221967)
chr6 (54-296)||(22247561-22247802)
chr6 (196-296)||(32704398-32704498)
chr6 (184-296)||(16883677-16883791)
chr6 (164-296)||(30978321-30978455)
chr6 (184-249)||(11183966-11184033)
chr6 (54-135)||(11411045-11411127)
chr6 (260-296)||(12980700-12980736)
chr6 (260-296)||(12983587-12983623)
chr6 (54-96)||(28974136-28974179)
chr6 (50-97)||(19476317-19476365)
[»] chr4 (11 HSPs)
chr4 (54-296)||(647203-647447)
chr4 (54-296)||(650475-650719)
chr4 (54-229)||(12172041-12172218)
chr4 (62-296)||(26062698-26062937)
chr4 (52-296)||(2541886-2542130)
chr4 (251-296)||(11649432-11649477)
chr4 (62-135)||(15851456-15851529)
chr4 (251-296)||(26060589-26060634)
chr4 (184-240)||(11649335-11649393)
chr4 (53-170)||(19929126-19929243)
chr4 (54-172)||(33400075-33400195)
[»] scaffold0363 (2 HSPs)
scaffold0363 (54-296)||(11-251)
scaffold0363 (243-285)||(280-322)
[»] chr8 (13 HSPs)
chr8 (54-296)||(14418467-14418707)
chr8 (54-288)||(12575300-12575535)
chr8 (184-299)||(41778872-41778988)
chr8 (54-135)||(39659712-39659793)
chr8 (218-296)||(13097022-13097100)
chr8 (251-296)||(41836421-41836466)
chr8 (54-172)||(9467309-9467429)
chr8 (184-240)||(41836324-41836382)
chr8 (52-135)||(453869-453953)
chr8 (243-285)||(14418396-14418438)
chr8 (52-92)||(5828352-5828393)
chr8 (54-118)||(18695744-18695809)
chr8 (53-118)||(14589386-14589453)
[»] chr2 (12 HSPs)
chr2 (54-296)||(16294900-16295143)
chr2 (54-296)||(23673345-23673588)
chr2 (54-296)||(36326928-36327171)
chr2 (54-296)||(32575685-32575930)
chr2 (54-278)||(13710091-13710315)
chr2 (124-296)||(40017981-40018154)
chr2 (54-281)||(31528406-31528635)
chr2 (124-296)||(31626551-31626726)
chr2 (54-97)||(24384925-24384968)
chr2 (52-127)||(38315799-38315874)
chr2 (54-135)||(29436031-29436113)
chr2 (54-118)||(15703739-15703804)
[»] chr3 (13 HSPs)
chr3 (54-296)||(13979488-13979730)
chr3 (54-296)||(22626312-22626554)
chr3 (54-296)||(11138570-11138812)
chr3 (54-164)||(46731589-46731699)
chr3 (54-296)||(39563510-39563754)
chr3 (54-118)||(3306147-3306213)
chr3 (54-163)||(20536333-20536445)
chr3 (54-172)||(19869223-19869343)
chr3 (232-296)||(46731496-46731559)
chr3 (56-118)||(4225619-4225681)
chr3 (54-118)||(30157797-30157863)
chr3 (186-249)||(50096829-50096894)
chr3 (54-135)||(27055155-27055236)
[»] scaffold0440 (1 HSPs)
scaffold0440 (124-296)||(9865-10038)
[»] scaffold0352 (2 HSPs)
scaffold0352 (62-164)||(2627-2728)
scaffold0352 (251-296)||(2802-2847)
[»] scaffold0264 (1 HSPs)
scaffold0264 (52-296)||(24183-24426)
[»] scaffold0068 (1 HSPs)
scaffold0068 (53-172)||(33729-33849)
[»] scaffold0567 (1 HSPs)
scaffold0567 (241-296)||(5999-6054)
[»] scaffold0273 (1 HSPs)
scaffold0273 (53-135)||(19508-19590)
[»] scaffold0084 (2 HSPs)
scaffold0084 (54-97)||(19593-19636)
scaffold0084 (54-97)||(29672-29715)
[»] scaffold0062 (1 HSPs)
scaffold0062 (54-118)||(52651-52716)
[»] scaffold0034 (1 HSPs)
scaffold0034 (54-99)||(48173-48218)


Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 296
Target Start/End: Original strand, 32505819 - 32506098
Alignment:
Q  16 atttaaacataaatcgaactattaatttgaatattttctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggag 115  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  32505819 attttaacataaatcgaactactaatttgaatactttctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtatccacgag 32505918  T
Q  116 gaccattg----ttaacttctactcggcaatttccttatcaaaaaggatgtataaatttatattgatgtctgaggcagttgagttgttttctaacataaa 211  Q
    ||||||||    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||||     |||||||||||||||    
T  32505919 gaccattgcatgttaacttctactcgacaatttctttatcaaaaaggatgtataaatttatattgatgcgtgaggcagtt-----gttttctaacataaa 32506013  T
Q  212 cgaattaaaaacaataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32506014 cgaattaaaaacaataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 32506098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 52 - 296
Target Start/End: Complemental strand, 13496234 - 13495989
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatc 151  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||| || ||||||| ||||||| ||||||||||||||||| |||||    
T  13496234 tctgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 13496135  T
Q  152 aaaaaggatgtataaatttatattga-tgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattat 250  Q
    |||||||||||||||||||||||||| ||||  |||||||||| ||||||| ||||||||||| |   |||||||||||||||| ||||||||||||||     
T  13496134 aaaaaggatgtataaatttatattgattgtcctaggcagttgaattgttttgtaacataaacgtaaataaaacaataaaagttgattttaagaatattag 13496035  T
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  13496034 agagaagtatggttaagacctttgaatcctccgaagttctcctatg 13495989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 10765165 - 10764921
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||| || ||||||| ||||||| ||||||||||||||||| ||||||    
T  10765165 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 10765066  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| | |  |||||||||||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||| |    
T  10765065 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 10764966  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  10764965 gagaagtatggttaagaccttcgaatcctctgaagttctcctatg 10764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 13493508 - 13493264
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||| || ||||||| ||||||| ||||||||||||||||| ||||||    
T  13493508 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 13493409  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| | |  |||||||||||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||| |    
T  13493408 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 13493309  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  13493308 gagaagtatggttaagaccttcgaatcctctgaagttctcctatg 13493264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 39546486 - 39546244
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||| |||||      
T  39546486 tgatagagatttggcaagtgaaccaaaattattgaagtaataaataagatcgta-tcacgaggaccattgttaacttttactcagcaatttcattatc-g 39546389  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    ||||||||||| || ||  |||| || |  |||||||||  |||  |||| |||| |||||| |   ||||||||||||||||||||||| ||||||| |    
T  39546388 aaaggatgtattaaattcaattgttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaaacaataaaagttggttttaaaaatattaga 39546289  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    
T  39546288 gagaagtatggttaagaccttcgaatcctccgaagttctcatatg 39546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 34066460 - 34066346
Alignment:
Q  184 aggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcct 280  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||| |||||||||||||||||||||    
T  34066460 aggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtatggttaagaccttcgaatcct 34066362  T
Q  281 ccgaagttctcctatg 296  Q
    ||||||||||||||||    
T  34066361 ccgaagttctcctatg 34066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 296
Target Start/End: Original strand, 16190177 - 16190421
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatc 151  Q
    |||||| || ||||| |||||||| ||||||||||||||||||||||||  |||||| || ||||||  ||||||| || || ||| |||   | |||      
T  16190177 tctgatggagatttgacaagtgaatcaaaactatcgaagtaataaataaattcgtatccacgaggactgttgttaatttttattcgacaaaaacgttaaa 16190276  T
Q  152 aaaaaggatgtataaatttatattgatgtctgaggcagttgagttgtt--ttctaacataaacgaattaaaaacaataaaagttggttttaagaatatta 249  Q
    | ||||||||||| || ||  || | || |  ||| | |||||||| |  || |||||||||||||||||||||||||||  ||||||||| ||| ||||    
T  16190277 ataaaggatgtattaaattcaatgg-tgccctaggaaattgagttgatgtttgtaacataaacgaattaaaaacaataaagattggtttta-gaaaatta 16190374  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     |||||||| |||||||||||||||||||||||||||||||||||||    
T  16190375 aagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 16190421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 296
Target Start/End: Complemental strand, 1936873 - 1936628
Alignment:
Q  55 gatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||||||||||||||||||||||  | ||||||||||| |||||  || | | ||  | |||||||||||||||||||| ||||||||| |||  ||    
T  1936873 gatagatatttggcaagtgaaccaaattcaatcgaagtaatgaataat-tcatttccacaatgaccattgttaacttctacttggcaatttcattagtaa 1936775  T
Q  154 aaaggatgtataaatttatattgat-gtctgaggcagttgagttgttt--tctaacataaac-gaattaaaaacaataaaagttggttttaagaatatta 249  Q
     || ||||||| || ||  || | | | |  |||||||||||||| ||  | || ||||||| |||||||||||  ||||| || | ||| |||| ||||    
T  1936774 taacgatgtattaaattcaatgggttgacctaggcagttgagttgattgttgtatcataaactgaattaaaaacggtaaaattttggttttagaaaatta 1936675  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     |||||||| |||||||||||||||||||||||||||||||||||||    
T  1936674 gagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 1936628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 27282274 - 27282351
Alignment:
Q  219 aaaacaataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||| ||| ||||||||| |||||||| |||||||| |||||||||| ||||||| ||||||||||||||||||    
T  27282274 aaaacaattaaaattggttttatgaatattagagagaagtatggttaagactttcgaattctccgaagttctcctatg 27282351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 34552438 - 34552519
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    ||||||||||||| |||||| |||||||||||||||||| |||  ||| |||||| || ||||||| ||||||| |||||||    
T  34552438 tgatagatatttgacaagtgtaccaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctact 34552519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 49716735 - 49716653
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    ||||||||| ||| |||||| ||||||| |||||||||||||||  ||| |||||| || ||||||| ||||||| |||||||    
T  49716735 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctact 49716653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 8435351 - 8435284
Alignment:
Q  184 aggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatatta 249  Q
    ||||||||||||||  |||| ||||||||||  | ||||||||||||||||||||||| |||| ||||    
T  8435351 aggcagttgagttgatttttgtaacataaacataataaaaacaataaaagttggtttttagaaaatta 8435284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 15297559 - 15297471
Alignment:
Q  67 gcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaaaa 155  Q
    ||||||| |||||||||||||||||| ||||| |  || ||| || | ||||| ||||||||||||||   |||||||| |||||||||    
T  15297559 gcaagtgtaccaaaactatcgaagtagtaaatgaattcatatccacggggaccgttgttaacttctacaaagcaatttcattatcaaaa 15297471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 22456700 - 22456736
Alignment:
Q  260 tggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| ||||||||||||||||||||||||||||||||    
T  22456700 tggtcaagaccttcgaatcctccgaagttctcctatg 22456736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 49147935 - 49147899
Alignment:
Q  260 tggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| ||||||||||||||||||||||||||||||||    
T  49147935 tggtcaagaccttcgaatcctccgaagttctcctatg 49147899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 49720214 - 49720135
Alignment:
Q  57 tagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    |||||| ||| |||||| ||||||| |||||||||||||||  ||| |||||| || ||||||| ||||||| |||||||    
T  49720214 tagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctact 49720135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 20981714 - 20981673
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaa-aactatcgaagta 92  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  20981714 tctgatagatatttggcaagtgtaccaataactatcgaagta 20981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 18392747 - 18392675
Alignment:
Q  64 ttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    |||||||||| ||||||| ||||||||||| |||  ||| |||||| || ||||||| ||||||| |||||||    
T  18392747 ttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctact 18392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 14616429 - 14616672
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| ||||||| ||||||||||||||||| |||||||    
T  14616429 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaa 14616528  T
Q  154 aaaggatgtataaatttatattga-tgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatag 252  Q
    ||||||||||| |||||||||||| |  |  ||| |||||||||||||| ||||||||||| |   |||||||||||||||| |||||||||||||| ||    
T  14616529 aaaggatgtatgaatttatattgattaccctaggaagttgagttgttttgtaacataaacgtaaataaaacaataaaagttgattttaagaatattagag 14616628  T
Q  253 agaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  14616629 agaagtatggttaagacctttgaatcctccgaagttctcctatg 14616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 7649942 - 7650185
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||||||||  ||||||| |||||||    
T  7649942 tgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttctttatcaa 7650041  T
Q  154 aaaggatgtataaatttatattga-tgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatag 252  Q
    |||||||||||||||||||||||| || |  |||||||||||||||||| ||||||||||| |   |||||||||||||||| |||||||||||||| ||    
T  7650042 aaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttgcttttaagaatattagag 7650141  T
Q  253 agaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||| |||||||||| || ||||||| ||||||||| |||||    
T  7650142 agaagtatggttaagacatttgaatcctacgaagttcttctatg 7650185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 34406094 - 34405850
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||| ||  |||||| ||||||| ||||||||||||||||| ||||||    
T  34406094 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttctttatca 34405995  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| | |  |||||||||||||||| | ||||||||||| |   ||||||||||||||||||||| ||||||||| |    
T  34405994 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttgtgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 34405895  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||    
T  34405894 gagaagtatggttaagaccttcaaatcctctgaagttctcctatg 34405850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 296
Target Start/End: Complemental strand, 33575331 - 33575091
Alignment:
Q  57 tagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaaaa 155  Q
    |||| |||||||||||||||||||  | |||||||||||||| ||  |||| |||| ||||||  |  |||||||||| |  |||||||  |||| ||||    
T  33575331 tagaaatttggcaagtgaaccaaattcaatcgaagtaataaaaaat-tcgttttcacgaggactgtatttaacttctatttagcaattttattattaaaa 33575233  T
Q  156 aggatgtataaatttatattgatgtctgaggcagttgagttgttttc-taacataaacgaattaaaaacaataaa-agttggttttaagaatattataga 253  Q
    ||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||||| | |||||||| |||| |||  |||    
T  33575232 aggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttagaaaattg-aga 33575134  T
Q  254 gaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||| |||||||| |||||||||||||||||| |||||||||    
T  33575133 gaagtatggttaagtccttcgaatcctccgaagctctcctatg 33575091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 281
Target Start/End: Original strand, 15532200 - 15532429
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||| ||||||||||  | |||||||||||||| ||  |||| | || ||||||  |  ||||||||||||  |||||||| |||| |    
T  15532200 tgatagatatttggcatgtgaaccaaattcgatcgaagtaataaaaaat-tcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 15532298  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaa-agttgg-ttttaagaatatta 249  Q
    |||||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||||| | |||| ||||||||| |||     
T  15532299 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt- 15532397  T
Q  250 tagagaagtgtggttaagaccttcgaatcctc 281  Q
     |||||||| |||||||| |||||||||||||    
T  15532398 gagagaagtatggttaagtccttcgaatcctc 15532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 56 - 281
Target Start/End: Original strand, 15542384 - 15542611
Alignment:
Q  56 atagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaaa 154  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||  |||| | || ||||||  |  ||||||||||||   ||||||| |||| |||    
T  15542384 atagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaat-tcgtttccacgaggactgtatttaacttctacttaacaatttcattattaaa 15542482  T
Q  155 aaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaa-agttgg-ttttaagaatattata 251  Q
    |||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||||| | |||| ||||||||| |||  |    
T  15542483 aaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-ga 15542581  T
Q  252 gagaagtgtggttaagaccttcgaatcctc 281  Q
    ||||||| |||||||| |||||||||||||    
T  15542582 gagaagtatggttaagtccttcgaatcctc 15542611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 22159823 - 22159746
Alignment:
Q  219 aaaacaataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||||||| |||||||||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||    
T  22159823 aaaacaataaaaattggttttaagaatattagagagaaatatggttaagacctttgaatcctccgaagttctcctatg 22159746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 11988995 - 11989108
Alignment:
Q  184 aggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctc 281  Q
    ||||||||||||||  |||| ||||||||||  ||||||||| ||||||| | | ||| |||| |||| ||||||||  |||||||||||||||||||||    
T  11988995 aggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagattgattttagaaaattagagagaagtaaggttaagaccttcgaatcctc 11989094  T
Q  282 cgaagttctcctat 295  Q
    | ||||||||||||    
T  11989095 caaagttctcctat 11989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 21680722 - 21680602
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    ||||||||||||||||||||| |||||||||||||||||| |||  ||| | |||| || ||||||| ||||||| |||||||  |||| ||| |||  |    
T  21680722 ctgatagatatttggcaagtgtaccaaaactatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 21680623  T
Q  153 aaaaggatgta-taaatttat 172  Q
     |||||||||| |||||||||    
T  21680622 taaaggatgtactaaatttat 21680602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 33921459 - 33921378
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    ||||||||||| |||||||| |||||||||||||||||| |||  ||| |||||| || ||||||| |||| || |||||||    
T  33921459 tgatagatattcggcaagtgtaccaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgtgaatttctact 33921378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 2499762 - 2499882
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| |||||||  |||||||||| |||  ||| |||||| || ||||||| ||||||| |||||||  |||| ||| |||  |    
T  2499762 tgatagatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 2499861  T
Q  153 aaaaggatgta-taaatttat 172  Q
     |||||||||| |||||||||    
T  2499862 taaaggatgtagtaaatttat 2499882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 1810197 - 1810272
Alignment:
Q  61 tatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    |||||| |||||| ||||||| ||||||||||| |||  ||| ||||||||| ||||||| ||||||| |||||||    
T  1810197 tatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtattcacgaggaccgttgttaatttctact 1810272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 25185741 - 25185703
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagta 92  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  25185741 tgatagatatttgacaagtgtaccaaaactatcgaagta 25185703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 26727301 - 26727260
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaa-aactatcgaagta 92  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  26727301 tctgatagatatttggcaagtgtaccaataactatcgaagta 26727260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 6e-74; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 6967393 - 6967149
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||| || ||||||| ||||||| ||||||||||||||||| ||||||    
T  6967393 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 6967294  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| | |  |||||||||||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||| |    
T  6967293 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 6967194  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  6967193 gagaagtatggttaagaccttcgaatcctctgaagttctcctatg 6967149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 24783654 - 24783410
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttcctt-atca 152  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||  | |||| || ||||||| ||||||| ||||||||||||||||| || ||||    
T  24783654 tgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctactcggcaatttcttttatca 24783555  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||| ||||||||||  |   ||||||||||||||||||||||||||||||| |    
T  24783554 aaaaggatgtataaatttatattgattgtccaaggcagttgagttgttttgtaacataaacttaaataaaacaataaaagttggttttaagaatattaga 24783455  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||    
T  24783454 gagaagtatggttaagacctttgaatcctccgaagttctcatatg 24783410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 17866353 - 17866597
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||| || ||||||| ||||||| ||||||||||||||||| ||||||    
T  17866353 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 17866452  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| | |  ||||||||||| |||||| ||||||||||| |   ||||||||||||||||||||| ||||||||| |    
T  17866453 aaaaggatgtataaatttatattgattgccctaggcagttgagctgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 17866552  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||    
T  17866553 gagaagtatggtttagaccttcgaatcctctgaagttctcctatg 17866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 53 - 296
Target Start/End: Original strand, 36842936 - 36843181
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||| || ||  |||||| ||||||| |||||||| |||||||| |||||     
T  36842936 ctgatagagatttggcaagtgaaccaaaattatcgaagtaataaataagatcgaatccacaaggaccgttgttaatttctactcagcaatttcgttatcg 36843035  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatatta 249  Q
    ||| |||||||| || ||  || | | | |  |||||||||  |||  |||| |||  |||||| |   |||||||||||||||||||||| ||||||||    
T  36843036 aaa-ggatgtattaaattcaatggtttgccctaggcagttggattggtttttataaagtaaacgtaaataaaacaataaaagttggttttatgaatatta 36843134  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     |||||||| |||||||||||||||||||||||||||||||||||||    
T  36843135 gagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 36843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 9766046 - 9765803
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||  ||| || ||||||| |||||||| ||| |||| ||||| |    
T  9766046 tgatagatatttggcaagttaaccaaaactatcgaagtaataaataagatcgaatccataagggccgttgttaatttctactcagcattttctttatcga 9765947  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    ||||||||||| || || | | | || |  |||||||||  |||  |||| |||  |||||  |   |||| |||||||||||||||||||||||||| |    
T  9765946 aaaggatgtattaaatt-tctggttgccctaggcagttggattggtttttataaagtaaacataaataaaataataaaagttggttttaagaatattaga 9765848  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  9765847 gagaagtatggttaagaccttcgaatcctctgaagttctcctatg 9765803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 161 - 296
Target Start/End: Original strand, 17863202 - 17863338
Alignment:
Q  161 gtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatagagaagtg 259  Q
    |||||||||||||||||| | |  ||||||||||| |||||| ||||||||||| |   ||||||||||||||||||||| ||||||||| ||||||||     
T  17863202 gtataaatttatattgattgccctaggcagttgagctgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagta 17863301  T
Q  260 tggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||||||||||||||||| ||||||||||||||    
T  17863302 tggttaagaccttcgaatcctctgaagttctcctatg 17863338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 36222392 - 36222552
Alignment:
Q  138 gcaatttccttatcaaaaaggatgtataaa-tttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaaag-ttg 234  Q
    |||||||| |||| |||||||||||||||| ||||||||| || |  |||||||||||||| |||||||||||||||  |||||||||||  |||| |||    
T  36222392 gcaatttcattattaaaaaggatgtataaaatttatattggtgccctaggcagttgagttgattttctaacataaactgattaaaaacaaagaaagattg 36222491  T
Q  235 gttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||| |||| |||  |||||||| |||||||| ||||||||||||||||||||||||||||    
T  36222492 gtttttagaagattg-agagaagtatggttaagtccttcgaatcctccgaagttctcctatg 36222552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 17857880 - 17857996
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| |||||||| || |||  ||| |||||| || ||||||| ||||||| ||||||||||||||||| ||||||    
T  17857880 tgatagatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 17857979  T
Q  153 aaaaggatgtataaatt 169  Q
    |||||||||||||||||    
T  17857980 aaaaggatgtataaatt 17857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 23759609 - 23759852
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||||||||||  | |||||||||||||| ||| |||| |  | ||||||  |  ||||||||||||  |||| ||| || | |    
T  23759609 tgatagatatttggcaagtgaaccaaattcaatcgaagtaataaa-aagttcgtttctacgaggactgtatttaacttctacttagcaaattcatttt-a 23759706  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaa-agttgg-ttttaagaatatta 249  Q
    |||||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||||| | |||| ||||||||| | |     
T  23759707 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaa-aatc 23759805  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     |||||||| |||||||| |||||||||||||| ||| |||||||||    
T  23759806 gagagaagtatggttaagtccttcgaatcctccaaagctctcctatg 23759852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 198 - 296
Target Start/End: Original strand, 23313406 - 23313504
Alignment:
Q  198 ttttctaacataaacgaattaaaaacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| |||||||||||||||||||||||||||||  ||||||| |||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  23313406 ttttgtaacataaacgaattaaaaacaataaaagaatggtttt-agaaaattagagagaagtatggttaagacctttgaatcctccgaagttctcctatg 23313504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 203 - 296
Target Start/End: Complemental strand, 23108082 - 23107989
Alignment:
Q  203 taacataaacgaattaaaaacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| ||||||||||||||||||||| ||||||| |||||||||    
T  23108082 taacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaaatgtggttaagaccttcgaatcatccgaagctctcctatg 23107989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 11279667 - 11279496
Alignment:
Q  124 ttaacttctactcggcaatttccttatcaaaaaggatgtataaa-tttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaa 221  Q
    |||| |||||||  |||||||| |||| |||||||||||||||| ||||||||| || |  |||||||||||||| |||| ||||||||||  |||||||    
T  11279667 ttaatttctacttagcaatttcattattaaaaaggatgtataaaatttatattggtgccctaggcagttgagttgattttgtaacataaactgattaaaa 11279568  T
Q  222 ac-aataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcct 293  Q
    || ||||||  |||||||| |||| |||  |||||||| |||||||| |||||||||| | ||||||||||||    
T  11279567 acgaataaagattggtttttagaagattg-agagaagtatggttaagtccttcgaatctttcgaagttctcct 11279496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 296
Target Start/End: Complemental strand, 295107 - 294866
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatc 151  Q
    ||||| ||||||||||||||||||||||  | |||||||||||||| ||  | || | || ||||||  |  ||||||||||||  |||||||| ||||     
T  295107 ctgatggatatttggcaagtgaaccaaattcaatcgaagtaataaaaaattt-gtgtccacgaggactgtatttaacttctacttagcaatttcattatt 295009  T
Q  152 aaaaaggatgt-ataaatttatattgatgtctgaggcagttgagttgttttctaacataaacgaattaaaaac-aataaaagttggttttaagaatatta 249  Q
    ||||||||||| ||||||||||||||||| | ||||||||  ||||||||| |||||||| |   |||||| | |||||   |||||||| |||| |||     
T  295008 aaaaaggatgtaataaatttatattgatgcccgaggcagt--agttgttttgtaacataagctggttaaaagcaaataaggattggtttt-agaaaatt- 294913  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     |||||||| |||||||| | ||||||||||||||||||||||||||    
T  294912 gagagaagtatggttaagtctttcgaatcctccgaagttctcctatg 294866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 296
Target Start/End: Original strand, 46846381 - 46846556
Alignment:
Q  124 ttaacttctactcggcaatttccttatcaaaaaggatgtataaa-tttatattgatgtctgaggcagttgagttgttttctaac-ataaac-gaattaaa 220  Q
    |||| |||||||  |||||||| |||| |||||||||||||||| ||||||||| || |  ||||||||||||||  |||| |  |||||| || | |||    
T  46846381 ttaatttctacttagcaatttcattattaaaaaggatgtataaaatttatattggtgccctaggcagttgagttgaattcttattataaactgactaaaa 46846480  T
Q  221 aacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||||||| |||||||| |||| |||  |||||||| |||||||| |||||||||||||||||||||| |||||    
T  46846481 aacaataaaagattggtttttagaaaattg-agagaagtatggttaagtccttcgaatcctccgaagttcttctatg 46846556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 3862052 - 3862151
Alignment:
Q  198 ttttctaacataaacgaattaaaaacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| ||||||||||  ||||||||||||||||| |||||||| | || |||| |||||||| || |||||||||||||||||| |||||||||||||||    
T  3862052 ttttgtaacataaactgattaaaaacaataaaagattggtttt-ataaaattagagagaagtatgattaagaccttcgaatccttcgaagttctcctatg 3862150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 124 - 296
Target Start/End: Complemental strand, 33313171 - 33312996
Alignment:
Q  124 ttaacttctactcggcaatttccttatcaaaaaggatgtat-aaatttatattgatgtctgaggcagttgagttg-ttttctaacataaac-gaattaaa 220  Q
    ||||||||||||  |||||||| |||| ||||||||||| | |||||||||||| || |  |||||||||||||| |||| |||||||||| ||||||||    
T  33313171 ttaacttctacttagcaatttcattattaaaaaggatgtgtaaaatttatattggtgccctaggcagttgagttgattttgtaacataaacggaattaaa 33313072  T
Q  221 aacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    || |||||| | |||||||| |||| ||   ||||||   |||||||| ||||||||||||| |||| |||||||||    
T  33313071 aataataaaggattggtttt-agaaaatctgagagaaaaatggttaagtccttcgaatcctctgaagctctcctatg 33312996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 3540924 - 3541042
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||| |||||||||||||| |||||||||||| ||||| |||  ||| |||||| || ||||||| |||| ||||||||||  |||| ||| |||  |     
T  3540924 tgataaatatttggcaagtgtaccaaaactatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaagttcgttaaaat 3541023  T
Q  154 aaaggatgtataaatttat 172  Q
    ||||||||||| |||||||    
T  3541024 aaaggatgtattaatttat 3541042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 38431757 - 38431675
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    |||||||||||||| ||||| ||||||| ||||||||||| |||  ||| |||||| || ||||||| ||||||| |||||||    
T  38431757 tgatagatatttggaaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccatgaggaccgttgttaatttctact 38431675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 5796896 - 5796851
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaaaactatcgaagtaataaa 97  Q
    ||||||||| |||| ||||||| || ||||||||||||||||||||    
T  5796896 tctgatagaaatttagcaagtgtactaaaactatcgaagtaataaa 5796851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 23598527 - 23598567
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaa-aactatcgaagta 92  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  23598527 ctgatagatatttggcaagtgtaccaataactatcgaagta 23598567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 6e-74; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 14790864 - 14790620
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||| || ||||||| ||||||| ||||||||||||||||| ||||||    
T  14790864 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 14790765  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| | |  |||||||||||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||| |    
T  14790764 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 14790665  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  14790664 gagaagtatggttaagaccttcgaatcctctgaagttctcctatg 14790620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 53 - 296
Target Start/End: Complemental strand, 14795893 - 14795648
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatc 151  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||   | ||||||| ||||||| ||||||||||||||||| |||||    
T  14795893 ctgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttctttatc 14795794  T
Q  152 aaaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattat 250  Q
    ||||||||||||||||||||||||||| | |  |||||||||||||||||| ||||||||||| |   ||||||||||||||||||||| |||||||||     
T  14795793 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 14795694  T
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||    
T  14795693 agagaagtatggttaagaccttcgaatcctctgaagttctcctatg 14795648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 1838720 - 1838475
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||  |||||| ||  |||||| ||||||| ||||||||||||||||| |||||||    
T  1838720 tgatagagatttggcaagtgaaccaaaattatcgaagtaataaataaattcgtatccacaaggaccgttgttaatttctactcggcaatttctttatcaa 1838621  T
Q  154 aaaggatgtataaatttatattga--tgtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatatta 249  Q
    ||||||||||||||||||||||||  | ||  || ||||||  |||  |||| |||  |||||| | | |||| ||||||||||||||||||||||||||    
T  1838620 aaaggatgtataaatttatattgatttttcctagacagttggattggtttttataaagtaaacgtaat-aaaagaataaaagttggttttaagaatatta 1838522  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     |||||||| |||||||||||||||||||||||||||||||||||||    
T  1838521 gagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 1838475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 296
Target Start/End: Original strand, 19664674 - 19664909
Alignment:
Q  62 atttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaaaaaggatg 161  Q
    |||||||||||||||||||||||||||||||||||||||  | |||| || ||||||| ||||| | ||||||||  ||||||| |||||||||||||||    
T  19664674 atttggcaagtgaaccaaaactatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttctttatcaaaaaggatg 19664773  T
Q  162 tataaatttatattgatgtctgaggcagttgagttgtt--ttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatagagaagtg 259  Q
    ||| || ||  |  | || |  |||||||||  ||| |  || ||| ||||||| ||||||||||||||||||| | |||||||| |||| ||||| ||     
T  19664774 tattaaattcaag-gttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttaagaaaattagagagatgta 19664872  T
Q  260 tggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||||||||||||||||||||||||||||||||    
T  19664873 tggttaagaccttcgaatcctccgaagttctcctatg 19664909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 294
Target Start/End: Complemental strand, 15540806 - 15540574
Alignment:
Q  62 atttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaaaaaggatg 161  Q
    |||||||||||||||||||||||||||||||||||||||  | |||  ||   |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  15540806 atttggcaagtgaaccaaaactatcgaagtaataaataaatttgtaaccaatcggaccattgttaacttctactcagcaatttctatatcaaaaaggatg 15540707  T
Q  162 tataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatagagaagtgt 260  Q
    ||| || ||  |    |  || |||||||||||||| |||||||| ||||| | |||||||||||||||||||   ||| |||| |||| |||||  | |    
T  15540706 tattaaattcaaggtttccct-aggcagttgagttgattttctaaaataaagggattaaaaacaataaaagtttagttttagaaaattaaagagatttat 15540608  T
Q  261 ggttaagaccttcgaatcctccgaagttctccta 294  Q
    ||||||||||||||||||||||||||||||||||    
T  15540607 ggttaagaccttcgaatcctccgaagttctccta 15540574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 13017189 - 13017433
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||||||||||  | |||||||||||||| ||| |||| | || |||||| ||  ||||||||||||  |||||||| |||| |    
T  13017189 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactatatttaacttctacttagcaatttcattatta 13017287  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaa-agttgg-ttttaagaatatta 249  Q
    |||||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||||| | |||| |||| |||| |||     
T  13017288 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttcagaaaatt- 13017386  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     |||||||| |||||||| |||||||||||||| ||| |||||||||    
T  13017387 gagagaagtatggttaagtccttcgaatcctccaaagctctcctatg 13017433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 27649346 - 27649104
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| ||||||| | |||||| |||||||| || || |    
T  27649346 tgatagagatttggcaagtgaactaaaactatcgaagtaataaataagatcgaatccacgaggaccgttgttaattcctactcagcaatttctttctcga 27649247  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    || ||||| || || || | | |  | |  |||||||||  |||  |||| ||||||||||| |    ||||||||||||||||||||||||| |||| |    
T  27649246 aa-ggatgcattaaatttt-tggtcgccctaggcagttggattggtttttataacataaacgtagatgaaacaataaaagttggttttaagaaaattaga 27649149  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    | ||||| |||||||||||||||||||||||||||||||||||||    
T  27649148 gcgaagtatggttaagaccttcgaatcctccgaagttctcctatg 27649104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 20527328 - 20527407
Alignment:
Q  217 taaaaacaataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  20527328 taaaaacaataaaagttggttttaagaatattagagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 20527407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 296
Target Start/End: Complemental strand, 15535292 - 15535058
Alignment:
Q  62 atttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaaaaaggatg 161  Q
    |||| ||| ||||||||||| ||||||||||||||||||  |||||| || ||||||| |||||||||||||||| || ||||| |||| ||||||||||    
T  15535292 atttcgcatgtgaaccaaaattatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcagccatttctttataaaaaaggatg 15535193  T
Q  162 tataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatagagaagtgt 260  Q
    ||| || ||  |  | || |  |||||||||||||| |||| ||| | |||   ||||||||||||||||||| | ||| | || |||| || || || |    
T  15535192 tattaaatt-caaggttgccctaggcagttgagttgattttgtaaaacaaatagattaaaaacaataaaagtttggttttacaaaattaaagtgatgtat 15535094  T
Q  261 ggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||||||||| |||||||||||||| |||||||    
T  15535093 ggttaagaccttcaaatcctccgaagttttcctatg 15535058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 32427544 - 32427303
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  | ||||  | ||||||| ||||||| |||||||| |||||||| |||||||    
T  32427544 tgatagatatttggtaagtgaaccaaaactatcgaagtaataaataaatttgtatctacgaggaccgttgttaa-ttctactcagcaatttctttatcaa 32427446  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    ||| ||||||| || ||  |  | || |  | |||||||  |||   ||| ||| |||||||||||||||||||| |||||| | ||| |||| |||| |    
T  32427445 aaaagatgtattaaatt-caaggttgcccta-gcagttggattggtatttgtaaaataaacgaattaaaaacaatgaaagtttggttttagaaaattaga 32427348  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| || || |||||||||| |||||||| ||||||||||||||    
T  32427347 gagatgtttgattaagacctttgaatcctctgaagttctcctatg 32427303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 22221967 - 22221726
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    ||||||| |||||||||||| ||||||| ||||||||||| ||| |||  |||| | || |||||| ||  ||| ||||||||  |||||||| |||| |    
T  22221967 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaattcgtttccacgaggactatatttagcttctactaagcaatttcattatta 22221869  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaa-agttggttttaagaatattata 251  Q
    |||||||||||||||||  ||||| || |  |||||||||||||| |||   | |||||| |||||||||||||||| | |||||||| |||| |||  |    
T  22221868 aaaaggatgtataaattattattggtgccctaggcagttgagttgatttagta-ataaactaattaaaaacaataaagaattggtttttagaaaattg-a 22221771  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||  |||||||| |||||||||||||||||| |||||||||    
T  22221770 gagaagcatggttaagtccttcgaatcctccgaagctctcctatg 22221726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 22247802 - 22247561
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    ||||||| |||||||||||| ||||||| ||||||||||| ||| |||  |||| | || |||||| ||  ||| ||||||||  |||||||| |||| |    
T  22247802 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaattcgtttccacgaggactatatttagcttctactaagcaatttcattatta 22247704  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaa-agttggttttaagaatattata 251  Q
    |||||||||||||||||  ||||| || |  |||||||||||||| |||   | |||||| |||||||||||||||| | |||||||| |||| |||  |    
T  22247703 aaaaggatgtataaattattattggtgccctaggcagttgagttgatttagta-ataaactaattaaaaacaataaagaattggtttttagaaaattg-a 22247606  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||  |||||||| |||||||||||||||||| |||||||||    
T  22247605 gagaagcatggttaagtccttcgaatcctccgaagctctcctatg 22247561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 196 - 296
Target Start/End: Original strand, 32704398 - 32704498
Alignment:
Q  196 tgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctat 295  Q
    |||||| ||||||||||| |   ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||    
T  32704398 tgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctat 32704497  T
Q  296 g 296  Q
    |    
T  32704498 g 32704498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 16883791 - 16883677
Alignment:
Q  184 aggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcct 280  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||| |||||||||| ||||||||||    
T  16883791 aggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtatggttaagacattcgaatcct 16883693  T
Q  281 ccgaagttctcctatg 296  Q
     |||||||||||||||    
T  16883692 tcgaagttctcctatg 16883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 30978321 - 30978455
Alignment:
Q  164 taaatttatattgatgtctgaggcagttgagttgttttc-taacataaacgaattaaaaacaataaa-agttggtttt-aagaatattatagagaagtgt 260  Q
    ||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||||| | |||||||| ||||| |||  |||||||| |    
T  30978321 taaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattg-agagaagtat 30978419  T
Q  261 ggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||| ||| |||||||||    
T  30978420 ggttaagtccttcgaatcctccaaagctctcctatg 30978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 11183966 - 11184033
Alignment:
Q  184 aggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatatta 249  Q
    ||||||||||||||  |||| ||||||||||| | ||||||||||||||||||||||| |||| ||||    
T  11183966 aggcagttgagttgatttttgtaacataaacgtaataaaaacaataaaagttggtttttagaaaatta 11184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 11411127 - 11411045
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    ||||||||| ||| |||||| ||||||| |||||||||||||||  ||| |||||| || ||| ||||||||||| |||||||    
T  11411127 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgagtaccattgttaatttctact 11411045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 12980700 - 12980736
Alignment:
Q  260 tggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| ||||||||||||||||||||||||||||||||    
T  12980700 tggtcaagaccttcgaatcctccgaagttctcctatg 12980736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 12983587 - 12983623
Alignment:
Q  260 tggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| ||||||||||||||||||||||||||||||||    
T  12983587 tggtcaagaccttcgaatcctccgaagttctcctatg 12983623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 28974136 - 28974179
Alignment:
Q  54 tgatagatatttggcaagtgaa-ccaaaactatcgaagtaataa 96  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  28974136 tgatagatatttggcaagtgtatccaaaactatcgaagtaataa 28974179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 19476365 - 19476317
Alignment:
Q  50 tttctgatagatatttggcaagtgaaccaaa-actatcgaagtaataaa 97  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| ||||    
T  19476365 tttctgatagatttttggcaagtgtaccaaatactatcgaagtagtaaa 19476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 647203 - 647447
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    ||||| |||||||||||||| ||||||| ||||||||||| |||  ||| | |||| || ||||||| ||||||| ||||||||||||||||| ||||||    
T  647203 tgataaatatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 647302  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| | |  ||||| |||||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||| |    
T  647303 aaaaggatgtataaatttatattgattgccctaggcatttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 647402  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||    
T  647403 gagaagtatggttaagatcttcgaatcctctgaagttctcctatg 647447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 650475 - 650719
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    ||||| |||||||||||||| ||||||| ||||||||||| |||  ||| | |||| || ||||||| ||||||| |||||||||||||||||  |||||    
T  650475 tgataaatatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctatatca 650574  T
Q  153 aaaaggatgtataaatttatattgat-gtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    |||||||||||||||||||||||||| | |  ||||| |||||||||||| ||||||||||| |   ||||||||||||||||||||| | ||||||| |    
T  650575 aaaaggatgtataaatttatattgattgccctaggcatttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcataatattaga 650674  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  650675 gagaagtatggttaagaccttcgaatcctctgaagttctcctatg 650719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 229
Target Start/End: Complemental strand, 12172218 - 12172041
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||||||||||  | |||||||||||||| |||||||| | || ||||||  |  ||||||||||||  |||||||| |||| |    
T  12172218 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 12172119  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaa 229  Q
    |||||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  |||||||||||||||    
T  12172118 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaa 12172041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 296
Target Start/End: Original strand, 26062698 - 26062937
Alignment:
Q  62 atttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggagga--ccattgttaacttctactcggcaatttccttatcaaaaagga 159  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||| || |||||  || ||||||||||||||||  ||||||| |||||||||||||    
T  26062698 atttggcaagtgaaccaaaactatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttctttatcaaaaagga 26062797  T
Q  160 tgtataaatttatattgatgtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatatt--atagaga 255  Q
    ||||| || ||  |  | || |  ||| |||||  |||   ||| ||| ||||||| ||||||||||||||||||| | ||| |||| |||  | |||||    
T  26062798 tgtattaaatt-caaggttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattagagagaga 26062896  T
Q  256 agtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     || ||||||||||||| |||||||||||||||||||||||    
T  26062897 tgtatggttaagacctttgaatcctccgaagttctcctatg 26062937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 296
Target Start/End: Complemental strand, 2542130 - 2541886
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttat 150  Q
    |||||||||||||||||||||| ||||||  | |||||||||||||||||  |||||| || ||||||  |  ||||||||||||  |||||||| ||||    
T  2542130 tctgatagatatttggcaagtgtaccaaagtcaatcgaagtaataaataat-tcgtatccacgaggactgtatttaacttctactgagcaatttcattat 2542032  T
Q  151 caaaaaggatgtataaatttatattgatgtctgaggcagttgagtt--gttttctaacataaacgaattaaaaacaataaaa-gttggttttaagaatat 247  Q
     ||||||||||||| || ||  | || || |  |||||||||||||   | || ||||||||||| ||||||||||||||||  | ||||||  ||| ||    
T  2542031 taaaaaggatgtattaaatt-caatggtgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttttgaaaat 2541933  T
Q  248 tatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    || ||||  || |||||||||||||||||||||| ||||||||| ||||    
T  2541932 taaagag--gtatggttaagaccttcgaatcctctgaagttctcttatg 2541886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 11649432 - 11649477
Alignment:
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  11649432 agagaagcatggttaagaccttcgaatcctccgaagttctcctatg 11649477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 15851529 - 15851456
Alignment:
Q  62 atttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    |||||||||||| |||||||||||||||||||||   ||| |||||| || ||||||| ||||||| |||||||    
T  15851529 atttggcaagtgtaccaaaactatcgaagtaatagtaaagttcgtatccacgaggaccgttgttaatttctact 15851456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 26060634 - 26060589
Alignment:
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  26060634 agagaagcatggttaagaccttcgaatcctccgaagttctcctatg 26060589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 11649335 - 11649393
Alignment:
Q  184 aggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggtttta 240  Q
    ||||||||||||||  |||| ||| ||||||||| ||||||||||||||||||||||||    
T  11649335 aggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaagttggtttta 11649393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 19929243 - 19929126
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaa-aactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatc 151  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||  || ||||| | || ||||||| ||||||| |||||||  |||| ||| ||  |    
T  19929243 ctgatagatatttggcaagtgtaccaataactatcgaagtagtaataaatatcgt-tccacgaggaccgttgttaatttctacttagcaagttctttgac 19929145  T
Q  152 aaaaaggatgtataaattt 170  Q
    | ||||||||| |||||||    
T  19929144 ataaaggatgtgtaaattt 19929126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 33400075 - 33400195
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| ||||||| ||| |||  ||| |||||| || ||| ||| ||||||| |||| ||  |||| ||| |||  |    
T  33400075 tgatagatatttggcaagtgtaccaaaagctatcgaggtagtaataaagttcgtatccacgagaaccgttgttaatttctgcttagcaagttcgttaaaa 33400174  T
Q  153 aaaaggatgt-ataaatttat 172  Q
     ||||||||| ||||||||||    
T  33400175 taaaggatgtaataaatttat 33400195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 11 - 251
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||  |||| | || ||||||| ||||||||| | |||  |||||||| |||||||    
T  11 tgatagatttttggcaagtgaaccaaagctatcgaagtagtaaataat-tcgt-tccacgaggaccgttgttaactacaacttagcaatttctttatcaa 108  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattataga 253  Q
    ||||||| | | || ||  || | || |  |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  109 aaaggatatgttaaattcaatggttgccctaggcagttgagttggtttttaacataaacaaattaaaaacaataaaagttggttttaagaatattagaga 208  T
Q  254 gaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||    
T  209 gaagtatggttaagacattcgaatcctccgaatttctcctatg 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 280 - 322
Alignment:
Q  243 aatattatagagaagtgtggttaagaccttcgaatcctccgaa 285  Q
    ||||||| |||||||| |||||||||| |||||||||||||||    
T  280 aatattagagagaagtatggttaagacattcgaatcctccgaa 322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 14418707 - 14418467
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||  |||| | || ||||||| ||||||||| | |||  |||||||| |||||||    
T  14418707 tgatagatttttggcaagtgaaccaaagctatcgaagtagtaaataat-tcgt-tccacgaggaccgttgttaactacaacttagcaatttctttatcaa 14418610  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattataga 253  Q
    ||||||| | | || ||  || | || |  |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  14418609 aaaggatatgttaaattcaatggttgccctaggcagttgagttggtttttaacataaacaaattaaaaacaataaaagttggttttaagaatattagaga 14418510  T
Q  254 gaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||    
T  14418509 gaagtatggttaagacattcgaatcctccgaatttctcctatg 14418467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 288
Target Start/End: Original strand, 12575300 - 12575535
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    ||||| |||||||||||||| ||||||  | |||||||||||||||||  |||||| || ||||||  ||||||||||||||||  ||| ||| |||| |    
T  12575300 tgataaatatttggcaagtgtaccaaattcaatcgaagtaataaataat-tcgtatccacgaggactgttgttaacttctactcaacaagttcattatta 12575398  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaag-ttggttttaagaatatta 249  Q
    |||||||||||| || ||  || | || |  ||||||||||||||  |||| |||||||||   ||||||||||||||||| |||||||| |||| ||||    
T  12575399 aaaaggatgtattaaattcaatgg-tgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggtttt-agaaaatta 12575496  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagtt 288  Q
     |||||||| ||||||||||| | |||||||||||||||    
T  12575497 gagagaagtatggttaagaccattgaatcctccgaagtt 12575535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 184 - 299
Target Start/End: Original strand, 41778872 - 41778988
Alignment:
Q  184 aggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctc 281  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||||| | | |||| ||| |||| |||||||| |||||||||||||| |||| ||    
T  41778872 aggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattgattta-gaagattaaagagaagtatggttaagaccttcaaatcttc 41778970  T
Q  282 cgaagttctcctatgcta 299  Q
    ||||||||||||||||||    
T  41778971 cgaagttctcctatgcta 41778988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 39659712 - 39659793
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    |||||||||||||||||||| ||| |||||||||||||| |||  ||| |||||| || ||||||||||||||| |||||||    
T  39659712 tgatagatatttggcaagtgtaccgaaactatcgaagtagtaataaagttcgtatccacgaggaccattgttaatttctact 39659793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 13097100 - 13097022
Alignment:
Q  218 aaaaacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||||||||| || |||||| ||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||    
T  13097100 aaaaacaataaaagattagtttta-gaaaattagagagaagtatggttaagaccttcgaatcctccgaagttatcctatg 13097022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 41836421 - 41836466
Alignment:
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  41836421 agagaagcatggttaagaccttcgaatcctccgaagttctcctatg 41836466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 9467429 - 9467309
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||||| || ||||||| ||||||| |||| ||  |||| ||| |||  |    
T  9467429 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaagttcgttaaaa 9467330  T
Q  153 aaaaggatgta-taaatttat 172  Q
     |||||||||| |||||||||    
T  9467329 taaaggatgtagtaaatttat 9467309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 41836324 - 41836382
Alignment:
Q  184 aggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggtttta 240  Q
    ||||||||||||||  |||| ||| ||||||||| ||||||||||||||||||||||||    
T  41836324 aggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaagttggtttta 41836382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 453953 - 453869
Alignment:
Q  52 tctgatagatatttggcaagtgaacc-aaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    ||||||||||||||| |||||| ||| |||||||| |||||| |||  ||| |||||| || ||||||| ||||||| |||||||    
T  453953 tctgatagatatttgacaagtgtaccaaaaactatggaagtactaataaagttcgtatccacgaggaccgttgttaatttctact 453869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 14418438 - 14418396
Alignment:
Q  243 aatattatagagaagtgtggttaagaccttcgaatcctccgaa 285  Q
    ||||||| |||||||| |||||||||| |||||||||||||||    
T  14418438 aatattagagagaagtatggttaagacattcgaatcctccgaa 14418396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 5828393 - 5828352
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaaaa-ctatcgaagta 92  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  5828393 tctgatagatatttggcaagtgtaccaaaagctatcgaagta 5828352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 18695744 - 18695809
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaat-aaataagatcgtattcaggaggac 118  Q
    |||||||| ||| ||||||| || ||||||||||||||||| ||||||| |||||| || ||||||    
T  18695744 tgatagatttttagcaagtgcactaaaactatcgaagtaataaaataagttcgtatccacgaggac 18695809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 14589386 - 14589453
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaaaactatcgaagtaataaa--taagatcgtattcaggaggac 118  Q
    ||||||||| ||| ||||||| || |||| |||||||||||||||  |||| ||||||||| ||||||    
T  14589386 ctgatagatttttagcaagtgtactaaaattatcgaagtaataaaattaagttcgtattcacgaggac 14589453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 5e-53; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 16295143 - 16294900
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||  || || ||||||| ||||||| |||||||| |||||||| |||||      
T  16295143 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaatttcgttatc-g 16295045  T
Q  154 aaaggatgtat-aaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaac-aataaaagttggttttaagaatattat 250  Q
    ||||||||||| ||||||||||||||| |  |||||||||||||| |||| || |||||||  ||||||||| ||||||  || ||||| |||| |||      
T  16295044 aaaggatgtataaaatttatattgatgccctaggcagttgagttgattttgtatcataaaccgattaaaaacaaataaagattagttttcagaaaatt-g 16294946  T
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||    
T  16294945 agagaagtatggttaagtccttcgaatcctccgaagttctcctatg 16294900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 23673345 - 23673588
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| ||||||| ||||||||  ||||||| |||||||    
T  23673345 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttctttatcaa 23673444  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    ||||||||||| || ||  |  | || |  |||||||||  |||   ||| ||| ||||||| ||||||||||||||||||| | ||| |||| |||| |    
T  23673445 aaaggatgtattaaatt-caaggttgccctaggcagttggattggcatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattaga 23673543  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| || |||||||||||||||||||||||||||||||||||||    
T  23673544 gagatgtatggttaagaccttcgaatcctccgaagttctcctatg 23673588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 36327171 - 36326928
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| |||||||||||||||| |||||||| |||||||    
T  36327171 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactctgcaatttctttatcaa 36327072  T
Q  154 aaaggatgta-taaatttatattgatgtctgaggcagtt-gagttgt-tttctaacataaacgaattaaaaacaataaaagttggttttaagaatattat 250  Q
    ||| |||||| |||||| | |  | || |  ||| |||| || | || ||| ||| ||||||| ||||||||||||||||||| | ||| |||| ||||     
T  36327071 aaaagatgtattaaattcaaa--gttgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattag 36326974  T
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||| || ||||||||||||| |||||||||||||||||| ||||    
T  36326973 agagatgtatggttaagacctttgaatcctccgaagttctcatatg 36326928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 32575685 - 32575930
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||  |||||| || ||||||| ||||||||||||||||  | ||||| |||| |     
T  32575685 tgatagatatttggcaagtgaaccaacactattgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcaacgatttcgttataat 32575784  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttgttttc-taacataaacgaattaaaaacaataaaagttggttttaagaatattatag 252  Q
    ||| ||||||| || ||  |||| |  |  |||||||||  |||||||  |||  |||||| |   ||||||||||||||||||||||||||||||| ||    
T  32575785 aaatgatgtattaaattcaattgttaccctaggcagttggattgtttttataaagtaaacgtaaataaaacaataaaagttggttttaagaatattagag 32575884  T
Q  253 a--gaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |  ||||| ||||||||||||||||||||||||||| |||||||||    
T  32575885 aaagaagtatggttaagaccttcgaatcctccgaagctctcctatg 32575930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 54 - 278
Target Start/End: Complemental strand, 13710315 - 13710091
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||||||||||  | |||||||||||||| |   |||| || | ||| ||  |  ||||||||||||  |||||||| |||| |    
T  13710315 tgatagatatttggcaagtgaaccaaattcaatcgaagtaataaaaat--tcgtttttacgagaactgtatttaacttctacttagcaatttcattatta 13710218  T
Q  153 aaaaggatgtataaa-tttatattgatgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaaag-ttggttttaagaatattat 250  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||  || ||||||||||| ||||||||||||||||| ||||||||| ||| |||      
T  13710217 aaaaggatgtataaaatttatattgatgcctgaggaagttgagttgagttgtaacataaacggattaaaaacaataaaagattggtttta-gaaaatttg 13710119  T
Q  251 agagaagtgtggttaagaccttcgaatc 278  Q
    |||||||| |||||||||||||| ||||    
T  13710118 agagaagtatggttaagaccttcaaatc 13710091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 124 - 296
Target Start/End: Complemental strand, 40018154 - 40017981
Alignment:
Q  124 ttaacttctactcggcaatttccttatcaaaaaggatgtataaa-tttatattgatgtctgaggcagttgagttgttttctaacataaacgaattaaaaa 222  Q
    |||||||| ||| ||||||||  |||| |||||||||||||||| |||||||||||| |  |||||||||||||| ||| ||||||||||| ||||||||    
T  40018154 ttaacttcgacttggcaatttttttattaaaaaggatgtataaaatttatattgatgccctaggcagttgagttgatttgtaacataaacggattaaaaa 40018055  T
Q  223 caataaaagttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||| ||   | |||||||| | |  |||||||| ||||||||||||||||||||||||||  |||||||||    
T  40018054 caataagagactggtttaagaaaaattgagagaagtatggttaagaccttcgaatcctccgaaactctcctatg 40017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 281
Target Start/End: Complemental strand, 31528635 - 31528406
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||||||||||  | |||||||||||||| ||  | || | || ||||||  |  ||||||||||||  |||||||| |||| |    
T  31528635 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattt-gtttccacgaggactgtatttaacttctacttagcaatttcattatta 31528537  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaa-agttgg-ttttaagaatatta 249  Q
    |||||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||||| | |||| ||||||||| |||     
T  31528536 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt- 31528438  T
Q  250 tagagaagtgtggttaagaccttcgaatcctc 281  Q
     |||||||| |||||||| |||||||||||||    
T  31528437 gagagaagtatggttaagtccttcgaatcctc 31528406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 124 - 296
Target Start/End: Complemental strand, 31626726 - 31626551
Alignment:
Q  124 ttaacttctactcggcaatttccttatcaaaaaggatgtataaa-tttatattgatgtctgaggcagttgagttg-ttttctaacataaacg-aattaaa 220  Q
    ||||||||||||  |||||||| |||| ||||||||||| |||| ||||||||| || |  |||||||||||||| |||| ||||||||| | |||||||    
T  31626726 ttaacttctacttagcaatttcattattaaaaaggatgtgtaaaatttatattggtgccctaggcagttgagttgattttgtaacataaaaggaattaaa 31626627  T
Q  221 aacaataaaag-ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    || |||||| | ||||||||| ||| ||   |||||||  |||||||| | |||||||||||||||| |||||||||    
T  31626626 aataataaaggattggtttta-gaaaatctgagagaagaatggttaagtcattcgaatcctccgaagctctcctatg 31626551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 24384925 - 24384968
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaa 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  24384925 tgatagatatttggcaagtgtaccaaaactatcgaagtaataaa 24384968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 38315799 - 38315874
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaa 127  Q
    ||||||| |||||||| ||||| | |||||||||||||||| |||  ||| |||||| || ||||||| |||||||    
T  38315799 tctgataaatatttggtaagtgtatcaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgttaa 38315874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 29436113 - 29436031
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    ||||||||| ||| |||||| | ||||| |||||||||||||||  ||| |||||| || ||||||| ||||||| |||||||    
T  29436113 tgatagataattgacaagtgtatcaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctact 29436031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 15703739 - 15703804
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaat-aaataagatcgtattcaggaggac 118  Q
    |||||||| ||| ||||||| || ||||||||||||||||| ||||||| |||||| || ||||||    
T  15703739 tgatagatttttagcaagtgcactaaaactatcgaagtaataaaataagttcgtatccacgaggac 15703804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 13979730 - 13979488
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||| || || ||||||   |||||| |||||||| |||||||| ||||| |    
T  13979730 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaaatcgaatccacgaggactgctgttaatttctactcagcaatttctttatcga 13979631  T
Q  154 aaaggatgtataaatttatattgatgtctgaggcagttgagttgttttc--taacataaacgaattaaaaacaataaaagttggttttaagaatattata 251  Q
    || |||||||| || | || | | || |  |||||||||  ||| |||   |||  |||||| |   ||||||||||||||||||||||||||||||| |    
T  13979630 aa-ggatgtattaaat-atctggttgcccaaggcagttggattggttttaataaagtaaacgtaaataaaacaataaaagttggttttaagaatattaga 13979533  T
Q  252 gagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||    
T  13979532 gagaagtatggttaagacctttgaatcctccgaagctctcctatg 13979488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 22626312 - 22626554
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||||||||||  | |||||||||||||| ||| |||| | || ||||||  |  ||||||||||||  |||||||| |||| |    
T  22626312 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 22626410  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaataaa-agttggttttaagaatattat 250  Q
    |||||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||||| | |||| ||| |||| |||      
T  22626411 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggattt-agaaaatt-g 22626508  T
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||| |||||||| |||||||||||||| ||| |||||||||    
T  22626509 agagaagtatggttaagtccttcgaatcctccaaagctctcctatg 22626554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 11138570 - 11138812
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||||||||||  | |||||||||||||| ||| |||| | || ||||||  |  ||||||||||||  |||||||| |||| |    
T  11138570 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 11138668  T
Q  153 aaaaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaacaata-aaagttggttttaagaatattat 250  Q
    |||||||||||||||||||||||| || |  |||||||||||||| |||  ||||||||||  ||||||||||||| | | ||||  || |||| |||      
T  11138669 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaatatagaattgg-attcagaaaatt-g 11138766  T
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||| |||||||| |||||||||||||| ||| |||||||||    
T  11138767 agagaagtatggttaagtccttcgaatcctccaaagctctcctatg 11138812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 46731699 - 46731589
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaa 153  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||  | |||| || ||||||| |||||||||||||||| |||||||| |||||||    
T  46731699 tgatagagatttggcaagtgaacaaaaactatcgaagtaatgaataaatttgtatccacgaggaccgttgttaacttctactcagcaatttctttatcaa 46731600  T
Q  154 aaaggatgtat 164  Q
    |||||||||||    
T  46731599 aaaggatgtat 46731589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 39563510 - 39563754
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||||||||||  | ||| |||||||||| ||  |||| | || ||||||  |  ||||||||||||  |||||||| |||| |    
T  39563510 tgatagatatttggcaagtgaaccaaattcaatcaaagtaataaaaaat-tcgtttccacgaggactgta-ttaacttctacttagcaatttcattataa 39563607  T
Q  153 aaaaggatgtataaa-tttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaa-ttaaaaacaataaaag-ttggttttaagaatatt 248  Q
    |||||||||| |||| ||||||||  || |  |||||||||||||| |||| |||||||||| || ||||||| | |||||| ||||||||| ||| ||     
T  39563608 aaaaggatgtgtaaaatttatattagtgccctaggcagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaaaatc 39563706  T
Q  249 atagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
      |||||||  |||||||| |||||||||||||||| | |||||||||    
T  39563707 tgagagaagaatggttaagtccttcgaatcctccgacgctctcctatg 39563754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 3306213 - 3306147
Alignment:
Q  54 tgatagatatttggcaagtgaaccaa-aactatcgaagtaataaa-taagatcgtattcaggaggac 118  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |||| |||||| || ||||||    
T  3306213 tgatagatatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 3306147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 20536333 - 20536445
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataa--gatcgtattcaggaggaccattgttaacttctactcggcaatttccttat 150  Q
    |||||||||||||| ||||| ||||||| |||| |||||| |||||||  |||||||| || ||||||  |  ||||||||||||  | |||||| ||||    
T  20536333 tgatagatatttggaaagtgtaccaaaaactattgaagtagtaaataaaagatcgtatccacgaggactgtatttaacttctacttagaaatttcattat 20536432  T
Q  151 caaaaaggatgta 163  Q
     ||||||||||||    
T  20536433 taaaaaggatgta 20536445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 19869343 - 19869223
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    |||||||||||||||||||| || |||| ||||| ||||| |||  ||| |||||| || ||||||| ||||||| |||||||  |||| ||| |||  |    
T  19869343 tgatagatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 19869244  T
Q  153 aaaaggatgta-taaatttat 172  Q
     |||||||||| |||||||||    
T  19869243 taaaggatgtagtaaatttat 19869223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 46731559 - 46731496
Alignment:
Q  232 ttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||||| ||| |||| ||||| ||  ||||||||||||||||||||||||||||||| ||||    
T  46731559 ttggtttta-gaaaattagagagatgtaaggttaagaccttcgaatcctccgaagttctcatatg 46731496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 4225619 - 4225681
Alignment:
Q  56 atagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggac 118  Q
    |||||||||||||||||| ||||| |||||||||||| |||  ||||| |||| || ||||||    
T  4225619 atagatatttggcaagtgtaccaatactatcgaagtagtaataaagattgtatccatgaggac 4225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 30157797 - 30157863
Alignment:
Q  54 tgatagatatttggcaagtgaaccaa-aactatcgaagtaataaa-taagatcgtattcaggaggac 118  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||| |||| |||||| || ||||||    
T  30157797 tgatagaaatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 30157863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 50096894 - 50096829
Alignment:
Q  186 gcagttgagttg--ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatatta 249  Q
    ||||||||||||  |||| ||||||||||| | |||||||| |||||||||||||| |||| ||||    
T  50096894 gcagttgagttgatttttgtaacataaacgtaataaaaacagtaaaagttggtttttagaaaatta 50096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 27055236 - 27055155
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    ||||| ||||||||||||   |||||||||||||||||| |||  ||  |||||| || ||||||| ||||||| |||||||    
T  27055236 tgataaatatttggcaagcataccaaaactatcgaagtagtaataaatttcgtatccacgaggaccgttgttaatttctact 27055155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 124 - 296
Target Start/End: Complemental strand, 10038 - 9865
Alignment:
Q  124 ttaacttctactcggcaatttccttatcaaaaaggatgtataaatttatattgatgtctgaggcagttgagttg-ttttctaacataaacgaattaaaaa 222  Q
    ||||||||||||  |||||||| |||| ||||||||||||||||||||||||| |  |  |||||||||||||| |||  ||||||||||  ||||||||    
T  10038 ttaacttctacttagcaatttcattattaaaaaggatgtataaatttatattggtcccctaggcagttgagttgatttagtaacataaactgattaaaaa 9939  T
Q  223 caataaa-agttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    ||||||| | |||||||| |||| |||  |||||||| |||||||| |||||||||||||||||| |||||||||    
T  9938 caataaataattggtttttagaaaatt-gagagaagtatggttaagtccttcgaatcctccgaagctctcctatg 9865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 164
Target Start/End: Original strand, 2627 - 2728
Alignment:
Q  62 atttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatcaaaaaggatg 161  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||| ||||| |||||||||    
T  2627 atttggcaagtggaccaaaactatcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaatttcgttatc-aaaaggatg 2725  T
Q  162 tat 164  Q
    |||    
T  2726 tat 2728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 2802 - 2847
Alignment:
Q  251 agagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||||||| | ||||||||||| ||||||||||||| |||||||||    
T  2802 agagaagtatcgttaagacctttgaatcctccgaagctctcctatg 2847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 52 - 296
Target Start/End: Original strand, 24183 - 24426
Alignment:
Q  52 tctgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttat 150  Q
    ||||||||| |||||||||||| ||||||| ||||||||||| ||| |||  | || | || ||||||  |  |||||||||||||  ||||||| ||||    
T  24183 tctgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaatttgtttccacgaggactgtatttaacttctactcaacaatttcattat 24281  T
Q  151 caaaaaggatgtataaatttatattgatgtctgaggcagttgagttgttttctaacataaacgaattaaaaacaataaa-agttggttttaagaatatta 249  Q
     ||||||||||||||||||  ||||| || |  |||||||||||||| |||   | ||||||  ||||||||||||||| | |||||||| |||| |||     
T  24282 taaaaaggatgtataaattattattggtgccctaggcagttgagttgatttagta-ataaactgattaaaaacaataaagaattggtttttagaaaatt- 24379  T
Q  250 tagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
     |||||||  |||||||| |||||||||||||||||| |||||||||    
T  24380 gagagaagcatggttaagtccttcgaatcctccgaagctctcctatg 24426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 172
Target Start/End: Original strand, 33729 - 33849
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctactcggcaatttccttatca 152  Q
    ||||||||||||||||||||| |||||||||||||||||| |||  ||| | |||| || ||||||| ||||||| |||||||  |||| ||| |||  |    
T  33729 ctgatagatatttggcaagtgtaccaaaactatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 33828  T
Q  153 aaaaggatgta-taaatttat 172  Q
     |||||||||| |||||||||    
T  33829 taaaggatgtactaaatttat 33849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 5999 - 6054
Alignment:
Q  241 agaatattatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 296  Q
    |||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  5999 agaaaattagagagaagtatggttaagaccttcgaatcctccgaggttctcctatg 6054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 19508 - 19590
Alignment:
Q  53 ctgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtattcaggaggaccattgttaacttctact 135  Q
    |||||| |||||||||||||| ||||||||| || ||||| |||  ||| |||||| || ||||||| ||||||| |||||||    
T  19508 ctgataaatatttggcaagtgtaccaaaactgtcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctact 19590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 19636 - 19593
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaa 97  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  19636 tgatagatttttggcaagtgtaccaaaactatcgaagtagtaaa 19593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 29715 - 29672
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaa 97  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  29715 tgatagatttttggcaagtgtaccaaaactatcgaagtagtaaa 29672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 52651 - 52716
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaat-aaataagatcgtattcaggaggac 118  Q
    |||||||| ||| ||||||| || ||||||||||||||||| ||||||| |||||| || ||||||    
T  52651 tgatagatttttagcaagtgcactaaaactatcgaagtaataaaataagttcgtatccacgaggac 52716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 48173 - 48218
Alignment:
Q  54 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaata 99  Q
    |||||||||||| ||||||| || |||||||| |||||||||||||    
T  48173 tgatagatatttagcaagtgtactaaaactattgaagtaataaata 48218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University