View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21437_high_21 (Length: 273)
Name: NF21437_high_21
Description: NF21437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21437_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 255
Target Start/End: Original strand, 31979357 - 31979596
Alignment:
| Q |
15 |
atgaacagaaaattaaggttaaaacaaaatctggtaacatacagcataagatttgaaccgaacagttcaacacttaaagaacaaaattaaaccctaataa |
114 |
Q |
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| T |
31979357 |
atgaacagaaaattaaggttaaaacaaaatctggtaacatacagcataagatttgaaccgaacagttcaacacttaaagaacaaaattaaaccctaa--- |
31979453 |
T |
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| Q |
115 |
gattcctttcatcataatccataacagaaaagagagagaaa--aaaccctatctatttccaacaagtttctcatagtactaaccactaattataccccaa |
212 |
Q |
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| T |
31979454 |
gattcctttcatcataatccataacagaaaagagagagagagaaaaccctctctatttccaacaagtttctcatagtactaaccactaattataccccaa |
31979553 |
T |
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| Q |
213 |
aacctaaaattaataaagacccataaaacaaacataacagaaa |
255 |
Q |
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| T |
31979554 |
aacctaaaattaataaagacccataaaacaaacataacagaaa |
31979596 |
T |
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