View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21437_low_13 (Length: 364)
Name: NF21437_low_13
Description: NF21437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21437_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 13 - 357
Target Start/End: Complemental strand, 32833876 - 32833532
Alignment:
| Q |
13 |
tcatcaaatggaacgattgaattgaatgttaccacatgtaccggtattatgtgtgtttgtagctttgtgctagttttatttatattggtttgattggtga |
112 |
Q |
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| T |
32833876 |
tcatgaaatggaacgattgaattgaatgttaccacatgtaccggtattatgtgtgtttgtagctttgtgctagttttatttatattggtttgattggtga |
32833777 |
T |
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| Q |
113 |
tcaatttgattatactgactgaatttgtgaattttaatttttaggagattaaagctgtggaacttgttaaaccaactggttggctttatctctcattatc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
32833776 |
tcaatttgattatactgactgaatttgtgaattttattttttaggagattaaagctgtggaacttgtgaaaccaactggttggctttatctctcattatc |
32833677 |
T |
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| Q |
213 |
tggacttgatcctcggtaagcatttttcgattatgtttttggtttggtactcaatgtcaaatgttgtttgttgtctccttagtccttactatgtcaaatg |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |
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| T |
32833676 |
tggacttgatcctcggtaagcatttttcgattatgttttcggtttggtactcaatgtcaaatgttgtttgttatctccttaatccttactatgtcaaatg |
32833577 |
T |
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| Q |
313 |
ctagcaattttccgcacattgaactaacctgcaagtcattctgtg |
357 |
Q |
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| T |
32833576 |
ctagcaattttccgcacattgaactaacctgcaagtcattctgtg |
32833532 |
T |
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