View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21437_low_27 (Length: 240)
Name: NF21437_low_27
Description: NF21437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21437_low_27 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 3640810 - 3640590
Alignment:
| Q |
20 |
aagctgactacagaaatatattgatacatgtaactttcaaccttcagagttccattgtagattggtaccactgtagagttacacaacttcttcaatctcc |
119 |
Q |
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| T |
3640810 |
aagctgactacagaaatatattgatacatgtaactttcaaccttcagagttccattgtagattggtaccactgtagagttacacaacttcatcaatctcc |
3640711 |
T |
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| Q |
120 |
tctaagccgcacataaacttgaatccaatctaacctcaggctcaacccagctcaatccagccaccttcttcaacccagtgcctctcattattttccgaac |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3640710 |
tctaagccgcacataaacttgaatccaatctaacctcaggctcaacccagctcaatccagccaccttcttcaacccagtgcctctcattattttccgaac |
3640611 |
T |
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| Q |
220 |
attattagcatcatcccacct |
240 |
Q |
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||||||||||||||||||||| |
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| T |
3640610 |
attattagcatcatcccacct |
3640590 |
T |
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