View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21438_high_17 (Length: 317)
Name: NF21438_high_17
Description: NF21438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21438_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 17 - 311
Target Start/End: Original strand, 45456369 - 45456663
Alignment:
| Q |
17 |
tcatgaagagccagccagccaaattgacggatcaatgaagaaagagaattaattaacaatattagattagattagaggtaattagaatgaaatggcatga |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45456369 |
tcatgaagagccagccagccaaattgacggatcaatgaagaaagagaattaattaacaatattagattagattagaggtaattagaatgaaatggcatga |
45456468 |
T |
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| Q |
117 |
tgtaccaaaaataaaatgaaatggcatgacataacaacataatacgacatttaactagctgtatttaagttatttaggaaggatttggttcttactatcc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45456469 |
tgtaccaaaaataaaatgaaatggcatgacataacaacataatacgacatttaactagctgtatttaagttatttaggaaggatttggttcttactatcc |
45456568 |
T |
|
| Q |
217 |
gtggcgtgggttgcacctgcttacatagagagtaatgagatcagtcgagagctcttaagtttacttgtgcactttttctgctattttcttctcac |
311 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45456569 |
gtggcgtgggttgcacctgcttacatagagaataatgagatcagtcgagagctcttaagtttacttgtgcactttttctgctattttcttctcac |
45456663 |
T |
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