View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21438_high_27 (Length: 219)
Name: NF21438_high_27
Description: NF21438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21438_high_27 |
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Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 21480470 - 21480674
Alignment:
| Q |
1 |
atattcctatttaattgaacttctctttgtaagtcagactagttccaattttagattttctttttgttgtgaacacataacatgaggagtgtaacatgga |
100 |
Q |
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| T |
21480470 |
atattcctatttaattgaacttctctttgtaagtcagactagttccaattttagattttctttttgttgtgaacacataacatgaggagtgtaacatgga |
21480569 |
T |
|
| Q |
101 |
atttgagcgtgttcatatatagttacttcttcgtccaattgcttctatgctatgtaaatttatacaaatcatgattttgtatttgttttctagcactctt |
200 |
Q |
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|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21480570 |
atttgagcgtgtacatatatggttacttcttcgtccaattgcttctatgctatgtaaatttatacaaatcatgattttgtatttgttttctagcactctt |
21480669 |
T |
|
| Q |
201 |
tgata |
205 |
Q |
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||||| |
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| T |
21480670 |
tgata |
21480674 |
T |
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