View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21439_high_13 (Length: 239)
Name: NF21439_high_13
Description: NF21439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21439_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 55099504 - 55099725
Alignment:
| Q |
1 |
tgctaattgtcattttaaaatacgaatgaagacttaattaaatttttccataaatatactataccattgctttggtcatgcactgccgttcattctcgag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
55099504 |
tgctaattgtcattttaaaatacgaatgaagacttaattaaatttttccataaatatactataccattgctttggtcatgcactgctgttcattctcgag |
55099603 |
T |
|
| Q |
101 |
ctgtcctgccttagaaataaagtcaccatatgttttctgtgacgggaacagttggaatccttcgtataaatctaggacatggatatggtttgggcacaaa |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55099604 |
ctgtcctgccttagaaataaagtcgccatatgttttctgtgacgggaacagttggaatccttcgtataaatctaggacatggatatggtttgggcacaaa |
55099703 |
T |
|
| Q |
201 |
ctagggaacatatgcccttcgt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
55099704 |
ctagggaacatatgcccttcgt |
55099725 |
T |
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