View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21439_low_20 (Length: 222)
Name: NF21439_low_20
Description: NF21439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21439_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 44945076 - 44945264
Alignment:
| Q |
18 |
aagaggagatgcagtaagacttgtaaatttgacatctgaacaaaacagctaatcctgacagataatttattctaatcctttttaaaccctgcgatcggta |
117 |
Q |
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| T |
44945076 |
aagaggagatgcagtaagacttgtaaatttgacatctgaacaaaacagctaatcctg-cagataatttattctaatcctttttaaaccctgcgatcggta |
44945174 |
T |
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| Q |
118 |
tctggctcaaaaccttagcatcaagcactgcatactgtttcttgatctcgatcattgccttctcagccagtgcatcaacctggtcttcat |
207 |
Q |
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| T |
44945175 |
tctggctcaaaaccttagcatcaagcactgcatactgtttcttgatctcgatcattgccttctcagccagtgcatcaacctggtcttcat |
44945264 |
T |
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