View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2143_low_11 (Length: 238)
Name: NF2143_low_11
Description: NF2143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2143_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 10126554 - 10126331
Alignment:
| Q |
1 |
acaatataatgctgctatttattaacttggaatgtggaaataaatcatagatgaaaaccaaaatgttttacttttttgttcgagaaaagtactatttttg |
100 |
Q |
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| T |
10126554 |
acaatataatgctgctatttattaacttggaatatggaaataaatcatagatgaaaaccaaaatgttttacttttttgttcgagaaacgtactatgtttg |
10126455 |
T |
|
| Q |
101 |
gaagatattcaatccaatttttcaccagatctcaataatcgctaccttatctttcatcaaagattgataggcataatggttgcattaaaactaaaatgga |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
10126454 |
gaagatatccaatccaatttttcaccagatctcaataatcggtaccttatctttcatcaaagattgataggcataatgcttgcattaaaactaaaatgga |
10126355 |
T |
|
| Q |
201 |
tgttctgcagccgattttgtggtt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
10126354 |
tgttctgcagccgattttgtggtt |
10126331 |
T |
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