View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21440_high_19 (Length: 426)

Name: NF21440_high_19
Description: NF21440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21440_high_19
NF21440_high_19
[»] chr7 (46 HSPs)
chr7 (120-300)||(13598037-13598217)
chr7 (120-287)||(8781449-8781616)
chr7 (118-299)||(35528351-35528532)
chr7 (120-300)||(24764155-24764335)
chr7 (120-300)||(37471491-37471671)
chr7 (120-300)||(32795678-32795858)
chr7 (118-287)||(17195473-17195642)
chr7 (120-299)||(33626898-33627077)
chr7 (141-300)||(34349661-34349820)
chr7 (120-287)||(47761669-47761836)
chr7 (120-300)||(37085721-37085901)
chr7 (121-300)||(15457160-15457338)
chr7 (119-300)||(32527976-32528156)
chr7 (119-300)||(33889179-33889360)
chr7 (147-300)||(36992158-36992311)
chr7 (152-300)||(34202628-34202775)
chr7 (117-300)||(8613718-8613897)
chr7 (120-300)||(30071989-30072169)
chr7 (152-300)||(39560501-39560649)
chr7 (143-296)||(3699167-3699320)
chr7 (152-300)||(555728-555876)
chr7 (153-300)||(29507942-29508089)
chr7 (120-300)||(22791769-22791951)
chr7 (154-300)||(42976699-42976845)
chr7 (120-245)||(40685633-40685758)
chr7 (120-292)||(2370735-2370907)
chr7 (164-300)||(3319007-3319143)
chr7 (152-300)||(5215687-5215835)
chr7 (120-287)||(47099118-47099285)
chr7 (118-231)||(48137246-48137359)
chr7 (154-300)||(31325368-31325514)
chr7 (159-252)||(30439734-30439827)
chr7 (160-297)||(36863263-36863400)
chr7 (153-297)||(23108540-23108684)
chr7 (152-300)||(9696997-9697133)
chr7 (149-266)||(33590279-33590396)
chr7 (159-266)||(18834231-18834338)
chr7 (152-245)||(34182094-34182186)
chr7 (159-300)||(46817041-46817180)
chr7 (169-300)||(8632772-8632903)
chr7 (116-300)||(10013252-10013435)
chr7 (159-298)||(49112335-49112474)
chr7 (166-261)||(26996534-26996629)
chr7 (254-300)||(40921631-40921677)
chr7 (117-157)||(7505208-7505248)
chr7 (214-266)||(36643394-36643446)
[»] chr5 (48 HSPs)
chr5 (120-300)||(21158832-21159012)
chr5 (120-300)||(18922122-18922302)
chr5 (120-300)||(21162640-21162820)
chr5 (120-300)||(21151697-21151877)
chr5 (135-300)||(17016459-17016624)
chr5 (120-300)||(7344656-7344836)
chr5 (120-300)||(24566189-24566369)
chr5 (120-300)||(24607225-24607405)
chr5 (117-300)||(39479304-39479487)
chr5 (120-300)||(17320331-17320511)
chr5 (120-300)||(4725141-4725320)
chr5 (118-300)||(26264358-26264540)
chr5 (120-300)||(7949694-7949874)
chr5 (120-287)||(7826923-7827090)
chr5 (152-300)||(14505870-14506018)
chr5 (120-287)||(8320476-8320643)
chr5 (115-298)||(5361142-5361324)
chr5 (120-300)||(16748916-16749096)
chr5 (152-300)||(28759338-28759486)
chr5 (120-287)||(24316511-24316678)
chr5 (115-300)||(26507193-26507378)
chr5 (120-297)||(39048634-39048810)
chr5 (152-300)||(1840513-1840661)
chr5 (120-266)||(7726342-7726488)
chr5 (159-299)||(20122708-20122848)
chr5 (120-300)||(39754368-39754541)
chr5 (159-300)||(27345231-27345372)
chr5 (152-300)||(16653900-16654048)
chr5 (160-300)||(43320498-43320638)
chr5 (152-287)||(2466287-2466422)
chr5 (159-300)||(41203305-41203442)
chr5 (120-245)||(38062942-38063066)
chr5 (159-300)||(7073962-7074103)
chr5 (211-300)||(19646925-19647014)
chr5 (120-245)||(39087644-39087768)
chr5 (146-282)||(2800615-2800750)
chr5 (146-282)||(2806784-2806919)
chr5 (120-240)||(9528662-9528782)
chr5 (152-300)||(1463062-1463208)
chr5 (159-287)||(36682731-36682859)
chr5 (225-300)||(8321752-8321827)
chr5 (159-241)||(5494668-5494750)
chr5 (120-200)||(8321673-8321752)
chr5 (228-299)||(39088999-39089070)
chr5 (159-299)||(31878069-31878209)
chr5 (228-300)||(6286175-6286247)
chr5 (152-205)||(39088948-39089001)
chr5 (117-157)||(10642138-10642178)
[»] chr3 (46 HSPs)
chr3 (120-300)||(3994992-3995172)
chr3 (120-300)||(3974705-3974885)
chr3 (120-287)||(29522784-29522951)
chr3 (119-300)||(1460258-1460439)
chr3 (120-300)||(54313318-54313498)
chr3 (119-300)||(41933240-41933421)
chr3 (120-300)||(49318267-49318447)
chr3 (119-300)||(7910131-7910312)
chr3 (119-300)||(32774414-32774595)
chr3 (119-300)||(36638060-36638241)
chr3 (120-287)||(12768564-12768731)
chr3 (118-300)||(42480988-42481170)
chr3 (121-287)||(51885296-51885457)
chr3 (120-300)||(24570225-24570405)
chr3 (146-300)||(35603810-35603964)
chr3 (122-248)||(49506100-49506226)
chr3 (120-300)||(1694942-1695122)
chr3 (152-300)||(44310247-44310395)
chr3 (119-300)||(43087932-43088113)
chr3 (120-292)||(33911619-33911791)
chr3 (149-300)||(26823011-26823162)
chr3 (120-269)||(39620438-39620587)
chr3 (152-300)||(26898214-26898362)
chr3 (120-300)||(31412107-31412286)
chr3 (120-291)||(17525302-17525472)
chr3 (120-299)||(39095227-39095406)
chr3 (159-300)||(9301033-9301174)
chr3 (152-300)||(41879387-41879535)
chr3 (152-300)||(55423712-55423860)
chr3 (159-300)||(51744110-51744252)
chr3 (152-300)||(1842534-1842682)
chr3 (160-299)||(44845231-44845370)
chr3 (120-262)||(41209396-41209537)
chr3 (152-300)||(10804509-10804657)
chr3 (152-300)||(50155517-50155665)
chr3 (120-274)||(28970528-28970683)
chr3 (129-266)||(10267812-10267949)
chr3 (122-287)||(33215357-33215522)
chr3 (160-300)||(1557332-1557471)
chr3 (152-287)||(7399697-7399833)
chr3 (175-284)||(14741005-14741114)
chr3 (159-287)||(53468083-53468210)
chr3 (160-266)||(15489084-15489190)
chr3 (232-299)||(28816103-28816170)
chr3 (152-200)||(30105823-30105871)
chr3 (168-240)||(30513117-30513188)
[»] chr1 (43 HSPs)
chr1 (120-300)||(44922155-44922335)
chr1 (120-300)||(699871-700051)
chr1 (120-300)||(50511957-50512137)
chr1 (120-300)||(40412495-40412675)
chr1 (113-300)||(33814903-33815089)
chr1 (113-300)||(33874373-33874559)
chr1 (122-300)||(5114871-5115049)
chr1 (120-300)||(40601710-40601890)
chr1 (120-300)||(48812516-48812696)
chr1 (120-287)||(48940766-48940938)
chr1 (119-300)||(19406609-19406790)
chr1 (120-300)||(44372860-44373040)
chr1 (152-300)||(35985469-35985617)
chr1 (120-300)||(39995436-39995616)
chr1 (120-287)||(28199181-28199348)
chr1 (119-299)||(48605821-48606000)
chr1 (152-300)||(30723296-30723444)
chr1 (122-275)||(42102156-42102308)
chr1 (152-300)||(41310505-41310653)
chr1 (120-300)||(45794063-45794239)
chr1 (118-300)||(6715105-6715286)
chr1 (159-300)||(1858752-1858893)
chr1 (171-287)||(20722204-20722320)
chr1 (164-300)||(25423271-25423407)
chr1 (122-287)||(47034513-47034678)
chr1 (159-287)||(45826670-45826798)
chr1 (120-300)||(23974159-23974338)
chr1 (194-300)||(21719945-21720051)
chr1 (166-300)||(48913590-48913724)
chr1 (120-234)||(52929457-52929571)
chr1 (171-287)||(50863857-50863973)
chr1 (175-298)||(21088508-21088631)
chr1 (159-258)||(39003050-39003149)
chr1 (120-269)||(12255206-12255347)
chr1 (152-225)||(343173-343246)
chr1 (159-283)||(38235640-38235764)
chr1 (153-226)||(46868744-46868817)
chr1 (254-300)||(343113-343159)
chr1 (187-285)||(25155739-25155837)
chr1 (240-300)||(46868816-46868876)
chr1 (111-150)||(31489605-31489644)
chr1 (163-217)||(40534519-40534573)
chr1 (177-266)||(27414050-27414139)
[»] chr2 (40 HSPs)
chr2 (120-300)||(30555605-30555785)
chr2 (119-300)||(26984434-26984615)
chr2 (119-300)||(41644253-41644434)
chr2 (120-300)||(12847831-12848011)
chr2 (120-300)||(23334007-23334189)
chr2 (118-300)||(10822246-10822428)
chr2 (119-300)||(31618062-31618243)
chr2 (120-300)||(10709709-10709889)
chr2 (115-300)||(27495841-27496026)
chr2 (120-300)||(2557619-2557799)
chr2 (159-300)||(25868901-25869042)
chr2 (120-300)||(31742842-31743022)
chr2 (120-287)||(27551937-27552104)
chr2 (119-300)||(1002473-1002654)
chr2 (149-300)||(34313729-34313880)
chr2 (120-287)||(36240733-36240900)
chr2 (120-298)||(28222876-28223054)
chr2 (120-300)||(42799478-42799657)
chr2 (152-300)||(1346246-1346394)
chr2 (120-286)||(29810679-29810845)
chr2 (159-300)||(27258811-27258952)
chr2 (152-300)||(10261304-10261452)
chr2 (152-287)||(13311518-13311653)
chr2 (159-300)||(35439504-35439645)
chr2 (152-300)||(45517158-45517306)
chr2 (119-300)||(19944766-19944947)
chr2 (159-300)||(37209506-37209647)
chr2 (152-287)||(10440135-10440270)
chr2 (120-266)||(37208889-37209036)
chr2 (122-240)||(9439290-9439408)
chr2 (123-266)||(12017480-12017622)
chr2 (152-287)||(13247723-13247858)
chr2 (120-287)||(18258031-18258197)
chr2 (152-300)||(30801174-30801322)
chr2 (175-300)||(2650055-2650181)
chr2 (153-287)||(30016205-30016339)
chr2 (170-300)||(38962213-38962343)
chr2 (153-300)||(20932462-20932600)
chr2 (160-216)||(20951705-20951761)
chr2 (184-227)||(15439232-15439275)
[»] scaffold0661 (1 HSPs)
scaffold0661 (120-300)||(1534-1714)
[»] chr8 (44 HSPs)
chr8 (119-299)||(29940068-29940248)
chr8 (120-300)||(356409-356589)
chr8 (120-299)||(20823477-20823656)
chr8 (119-300)||(32018291-32018472)
chr8 (120-300)||(6266236-6266416)
chr8 (120-300)||(5927043-5927223)
chr8 (120-292)||(40027534-40027706)
chr8 (120-300)||(24101721-24101901)
chr8 (120-300)||(38231701-38231880)
chr8 (120-287)||(31894921-31895087)
chr8 (120-259)||(38894680-38894819)
chr8 (159-300)||(11202155-11202296)
chr8 (120-287)||(41395776-41395943)
chr8 (120-266)||(5913259-5913405)
chr8 (152-300)||(26098270-26098418)
chr8 (152-300)||(41827527-41827675)
chr8 (120-299)||(42935752-42935930)
chr8 (120-226)||(32925395-32925501)
chr8 (159-300)||(37819215-37819356)
chr8 (147-300)||(40027736-40027889)
chr8 (120-299)||(7764302-7764481)
chr8 (145-300)||(15041325-15041480)
chr8 (145-300)||(21412434-21412589)
chr8 (145-300)||(21806926-21807081)
chr8 (160-299)||(27639993-27640132)
chr8 (159-300)||(14615550-14615691)
chr8 (160-300)||(7161575-7161715)
chr8 (152-300)||(24476356-24476504)
chr8 (152-300)||(41644150-41644298)
chr8 (149-300)||(28994756-28994905)
chr8 (160-300)||(7433414-7433554)
chr8 (159-266)||(22487330-22487437)
chr8 (163-258)||(34347019-34347114)
chr8 (149-287)||(37255568-37255706)
chr8 (202-287)||(957508-957593)
chr8 (152-284)||(44679145-44679277)
chr8 (231-300)||(30874177-30874246)
chr8 (120-300)||(23192839-23193019)
chr8 (179-287)||(43067084-43067192)
chr8 (159-231)||(5924586-5924658)
chr8 (254-300)||(18654495-18654541)
chr8 (159-200)||(30874247-30874288)
chr8 (123-169)||(957466-957512)
chr8 (152-200)||(20983843-20983891)
[»] chr4 (61 HSPs)
chr4 (120-300)||(32555642-32555822)
chr4 (147-300)||(44871486-44871639)
chr4 (120-300)||(56264379-56264559)
chr4 (145-300)||(16623451-16623606)
chr4 (154-299)||(41883116-41883261)
chr4 (120-300)||(52278776-52278955)
chr4 (120-300)||(19823619-19823799)
chr4 (120-300)||(41831169-41831349)
chr4 (117-300)||(56114169-56114352)
chr4 (120-299)||(401334-401513)
chr4 (120-299)||(53925306-53925485)
chr4 (116-300)||(6643269-6643453)
chr4 (152-300)||(35392744-35392892)
chr4 (120-287)||(40731190-40731357)
chr4 (119-248)||(6366322-6366451)
chr4 (120-300)||(19521739-19521919)
chr4 (117-300)||(53724824-53725007)
chr4 (159-300)||(41140608-41140749)
chr4 (118-300)||(30000211-30000392)
chr4 (159-300)||(15194482-15194623)
chr4 (159-300)||(39809594-39809735)
chr4 (147-300)||(51435550-51435703)
chr4 (152-300)||(26706883-26707031)
chr4 (126-287)||(1138977-1139138)
chr4 (120-297)||(19474665-19474842)
chr4 (118-287)||(31616493-31616662)
chr4 (124-300)||(24678240-24678416)
chr4 (160-300)||(39240400-39240540)
chr4 (152-300)||(50097391-50097539)
chr4 (160-287)||(35013807-35013934)
chr4 (152-287)||(35666579-35666714)
chr4 (154-287)||(18861622-18861753)
chr4 (159-300)||(56519971-56520111)
chr4 (152-300)||(34435890-34436037)
chr4 (152-300)||(54093962-54094110)
chr4 (120-215)||(16346925-16347020)
chr4 (159-287)||(33493101-33493229)
chr4 (120-231)||(48152682-48152793)
chr4 (183-300)||(49480744-49480861)
chr4 (120-200)||(48500381-48500461)
chr4 (152-300)||(13563374-13563510)
chr4 (193-300)||(24534635-24534741)
chr4 (120-231)||(40226904-40227015)
chr4 (120-287)||(42587326-42587493)
chr4 (159-297)||(45849300-45849438)
chr4 (120-200)||(20671898-20671978)
chr4 (147-234)||(51031641-51031728)
chr4 (152-266)||(36694112-36694226)
chr4 (229-300)||(48500306-48500377)
chr4 (159-231)||(42248065-42248137)
chr4 (160-300)||(54555555-54555694)
chr4 (163-200)||(36075876-36075913)
chr4 (118-217)||(8907110-8907211)
chr4 (153-231)||(4709249-4709327)
chr4 (254-300)||(16346855-16346901)
chr4 (250-300)||(48152797-48152847)
chr4 (240-300)||(4709321-4709381)
chr4 (120-240)||(12030070-12030190)
chr4 (120-154)||(26489216-26489250)
chr4 (120-157)||(19240744-19240781)
chr4 (117-157)||(17543719-17543759)
[»] chr6 (27 HSPs)
chr6 (120-300)||(17547462-17547642)
chr6 (119-300)||(2702963-2703144)
chr6 (119-300)||(12577291-12577471)
chr6 (121-300)||(15183712-15183892)
chr6 (122-300)||(29641012-29641190)
chr6 (122-294)||(31511197-31511369)
chr6 (147-300)||(4170901-4171054)
chr6 (112-300)||(15067987-15068175)
chr6 (120-287)||(21036030-21036197)
chr6 (116-300)||(26555184-26555372)
chr6 (159-300)||(32897086-32897227)
chr6 (152-300)||(2067140-2067288)
chr6 (120-300)||(13835885-13836065)
chr6 (164-286)||(29034472-29034594)
chr6 (117-243)||(34178400-34178526)
chr6 (152-300)||(9035066-9035214)
chr6 (152-300)||(22988137-22988285)
chr6 (152-300)||(23800111-23800259)
chr6 (120-231)||(13087706-13087817)
chr6 (171-272)||(26483655-26483756)
chr6 (1-116)||(31045056-31045179)
chr6 (163-300)||(28985282-28985422)
chr6 (349-390)||(31045317-31045358)
chr6 (213-272)||(2289979-2290038)
chr6 (120-181)||(2289923-2289984)
chr6 (202-246)||(17868448-17868492)
chr6 (202-246)||(17878231-17878275)
[»] scaffold0019 (1 HSPs)
scaffold0019 (120-300)||(103079-103255)
[»] scaffold0007 (2 HSPs)
scaffold0007 (118-300)||(56193-56374)
scaffold0007 (152-266)||(231673-231787)
[»] scaffold0036 (1 HSPs)
scaffold0036 (120-300)||(27587-27767)
[»] scaffold0171 (1 HSPs)
scaffold0171 (159-299)||(2317-2457)
[»] scaffold0124 (1 HSPs)
scaffold0124 (120-300)||(40024-40204)
[»] scaffold0461 (2 HSPs)
scaffold0461 (120-246)||(2380-2506)
scaffold0461 (120-246)||(9316-9442)
[»] scaffold0360 (1 HSPs)
scaffold0360 (152-300)||(12770-12918)
[»] scaffold0664 (1 HSPs)
scaffold0664 (162-300)||(7751-7889)
[»] scaffold1318 (1 HSPs)
scaffold1318 (160-300)||(950-1090)
[»] scaffold0079 (2 HSPs)
scaffold0079 (120-215)||(45841-45936)
scaffold0079 (254-300)||(45960-46006)
[»] scaffold1243 (1 HSPs)
scaffold1243 (119-266)||(1975-2122)
[»] scaffold0583 (1 HSPs)
scaffold0583 (120-231)||(2201-2312)
[»] scaffold0173 (1 HSPs)
scaffold0173 (120-244)||(21967-22091)
[»] scaffold0021 (2 HSPs)
scaffold0021 (152-247)||(125873-125968)
scaffold0021 (254-300)||(120949-120995)
[»] scaffold0831 (1 HSPs)
scaffold0831 (147-300)||(39-192)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-77)||(172255-172331)
scaffold0018 (313-356)||(172144-172187)
[»] scaffold0041 (1 HSPs)
scaffold0041 (254-300)||(51418-51464)
[»] scaffold1449 (1 HSPs)
scaffold1449 (117-157)||(1640-1680)


Alignment Details
Target: chr7 (Bit Score: 145; Significance: 4e-76; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 13598037 - 13598217
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||| |    
T  13598037 tagagctgtcaaaacgggccaggccgtatggactggcccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttaatagggc 13598136  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13598137 tttttagcccggccctaaaaagcccgctatccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 13598217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 8781449 - 8781616
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |    
T  8781449 tagagctgtcaaaacgggtcgggccatatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggc 8781548  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  8781549 tttttagcccggtcctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagtccgc 8781616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 118 - 299
Target Start/End: Complemental strand, 35528532 - 35528351
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    ||||||||||||||||||||||||||| || || |||| | ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  35528532 actagagctgtcaaaacgggccgggccatacggtccggtccgtttagcccgattaattatagggcttggaccttaaatattgatcccgaattttaatagg 35528433  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
      ||||||| |||||||||||||||||| || ||| ||||||||||| |||||||||| |||||||||| ||||| ||||||    
T  35528432 gttttttagcccggccctaaaaagcccggtacccgttagggctagcctgaacgggccgcgggtagcccgttagcctgcataa 35528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 24764155 - 24764335
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||||| || ||| ||||||| |||||||| ||||||||   ||||||||||||||| |    
T  24764155 tagagctgtcaaaacgggccgggtcgtatgggccggcccgtttagcctgaataaatatagggcttgggcctaaaatattgtgtccgaattttaatagggc 24764254  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  24764255 tttttagcccggcccttaaaagcccggtatccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 24764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 37471671 - 37471491
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||| ||| ||||||  |||||||| ||||||||| |||||||||||||||| |    
T  37471671 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatataggacttgggcctaaaatattgagcccgaattttaatagggc 37471572  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  37471571 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 37471491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 32795678 - 32795858
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| || ||| ||||||||||| ||| ||||||| ||||| || ||||||||| |||||||||||||||| |    
T  32795678 tagagctgtcaaaacgggccggcccgtatgggccagcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagggc 32795777  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  32795778 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 32795858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 118 - 287
Target Start/End: Original strand, 17195473 - 17195642
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    ||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||| ||||||||||||||||||  |||||||||| || |    
T  17195473 actagagctgtcaaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttactatg 17195572  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
     |||||||| ||| |||||||||| ||| || ||| |||||||||||||||||||||| |||||||||||    
T  17195573 gctttttagcccgaccctaaaaagtccggtacccgttagggctagcccgaacgggccgcgggtagcccgc 17195642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 120 - 299
Target Start/End: Complemental strand, 33627077 - 33626898
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| ||||||| || || || ||| ||  |||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||||| |    
T  33627077 tagagctgtcaaaatgggccggcccatacggtccgacccatttagcccaattaaatatagggcttgggccttaaatattgagcccgaattttaatagggc 33626978  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    ||||||| ||||||||||||| ||||||| ||| |||||||||| ||||||||| |||||||||||||||||| ||||||    
T  33626977 tttttagcccggccctaaaaaccccgctacccgttagggctagctcgaacgggctgagggtagcccgctagcctgcataa 33626898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 34349661 - 34349820
Alignment:
Q  141 ggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaa 240  Q
    |||||||||| |||| |  |||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||| || |||||||    
T  34349661 ggccgtatgggccggtccatttagcccgattaattatagggattggaccttaaatattgagcccgaattttaatagggctttttagtccagctctaaaaa 34349760  T
Q  241 gcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||| ||||||| |||||    
T  34349761 gcccgctatccgttagggctagtccgaacggaccgagggtagcccgttagcccgtataac 34349820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 47761836 - 47761669
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||| |||||||||||||||  ||||||||||||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  47761836 tagagatgtcaaaacgggccgacccgtatggaccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 47761737  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||||||| ||||||||| || ||| |||||||||||||||  ||||| |||||||||||    
T  47761736 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaataggccgcgggtagcccgc 47761669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 37085721 - 37085901
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| ||||||||   |||| ||||||| ||| ||| ||||| | |||||||| ||||||||| ||||||||||||||||||    
T  37085721 tagagctgtcaaaacgggccggaccgtatgggttggcctgtttagcacgaataaatatagagcttgggcctaaaatattgagcccgaattttaataggac 37085820  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||| | | || ||| |||||||||||||||||||||| |||||||||| || ||||||||||    
T  37085821 tttttagcccggcccttaaaagtctggtacccgttagggctagcccgaacgggccgcgggtagcccgttaacccgcataac 37085901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 121 - 300
Target Start/End: Complemental strand, 15457338 - 15457160
Alignment:
Q  121 agagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggact 220  Q
    |||| |||||||||||| |||||| || || | |||| ||||||||||||||||||||||  |||||||||||||||||| ||| |||||||||||| ||    
T  15457338 agagttgtcaaaacgggtcgggccttacgggcgggcccgtttagcccgattaattataggccttgggccttaaatattgagcccaaattttaatagggct 15457239  T
Q  221 ttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||| | |||||||||||||||| || ||| |||||||| ||| ||||||||| |||||||||| |||| ||||||||    
T  15457238 ttttagccgggccctaaaaagcccggtacccgttagggcta-ccccaacgggccgcgggtagcccgttagctcgcataac 15457160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 32528156 - 32527976
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||||||| ||||||| |  || ||||||  ||||||| |||||||||||||| |||| ||||||||||||| ||| ||||||||||||     
T  32528156 ctagagctgtcaaaacggaccgggccttgcgggccggcctatttagcctgattaattatagggcttggaccttaaatattgagcccaaattttaatagg- 32528058  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||| ||||||||| ||| || ||| |||||||||||||||||||||  |||||||||| ||||| |||||||    
T  32528057 ctttttagcccggtcctaaaaagtccggtacccgttagggctagcccgaacgggccacgggtagcccgttagcctgcataac 32527976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 119 - 300
Target Start/End: Original strand, 33889179 - 33889360
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||||||| || |||||||  ||||| |||||||||||  || ||||||| |||||||| ||||||||| |||||||||||||||      
T  33889179 ctagagctgtcaaaacgggccaggtcgtatgggtcggcccgtttagcccgaaaaaatatagggcttgggcctaaaatattgagcccgaattttaatagag 33889278  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||||||| ||||||||| ||| || |||||||||||||||| ||||| | ||||| || ||| |||||||||    
T  33889279 ctttttagcccggcccttaaaagcccggtattcgttagggctagcccgaacaggccgcgcgtagctcgttaggccgcataac 33889360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 36992158 - 36992311
Alignment:
Q  147 atggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgc 246  Q
    ||||||||||| |||||||| || ||| |||||||||||||||| ||||||||| ||||||||||||||||  ||||||| |||||||| |||||||||     
T  36992158 atggaccggcccgtttagcctgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccgg 36992257  T
Q  247 tatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||| ||||||||||||||| ||||||  ||||||||| ||| |||||||||    
T  36992258 tatccgttagggctagcccgaatgggccgcaggtagcccgttagtccgcataac 36992311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 34202775 - 34202628
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||||||||| ||  |||||||||||| |||||||| |||||||| ||||||||| || ||    
T  34202775 ccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcca-aattttaatagggctttttagcccggcccttaaaagcccggtaccc 34202677  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||||||||||||||||| |||||||||| |||||||||||||    
T  34202676 gttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 34202628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 117 - 300
Target Start/End: Original strand, 8613718 - 8613897
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatag 216  Q
    ||||||||||||||||||||| ||| ||  |||  |||| | ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||    
T  8613718 aactagagctgtcaaaacgggtcggccc--atg--ccggtccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatag 8613813  T
Q  217 gactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||| |||||||| ||||||||| || ||| |||||||||| |||| |||| | |||||||||| |||||||||||||    
T  8613814 ggctttttagcccggcccttaaaagcccggtacccgttagggctagctcgaatgggctgcgggtagcccgttagcccgcataac 8613897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 30071989 - 30072169
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||| || |||| ||||||| |||||| ||||| ||||| ||| ||||||| |||| ||| ||||||||| ||| |||||||||||| |    
T  30071989 tagagctgtcaaaacaggtcgggtcgtatgggccggcccgtttaacccgaataaatatagggcttggacctaaaatattgagcccaaattttaatagggc 30072088  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| || |||||  |||||||| || ||| |||||||| ||||||||||| | |||||||||| |||||||||||||    
T  30072089 tttttagcccagccctttaaagcccgttacccgttagggctaacccgaacgggctgcgggtagcccgttagcccgcataac 30072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 39560501 - 39560649
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||| || || ||    
T  39560501 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagctcggtaccc 39560600  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| | |||||||||||    
T  39560601 gttagggctagcccgaatgggccgcgggtagcccgttcgcccgcataac 39560649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 143 - 296
Target Start/End: Original strand, 3699167 - 3699320
Alignment:
Q  143 ccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagc 242  Q
    |||||||| |||| | || |||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| |||||||  |||| ||| ||||||    
T  3699167 ccgtatgggccggtccgtatagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttaacccggtccttaaaagc 3699266  T
Q  243 ccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgca 296  Q
    ||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||    
T  3699267 ccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgca 3699320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 555876 - 555728
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||  ||||||  |||| ||| |||||| || || ||    
T  555876 ccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggttttttaacccgggccttaaaagctcggtaccc 555777  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||| |||||||||||| |||||||||| |||||||||||||    
T  555776 gttagggctagtccgaacgggccgtgggtagcccgttagcccgcataac 555728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 153 - 300
Target Start/End: Original strand, 29507942 - 29508089
Alignment:
Q  153 cggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccg 252  Q
    ||||| ||||||||||| ||| |||||||||||||||| ||||||||| |  ||||||||||||| ||||||||||||||||| ||||   || || |||    
T  29507942 cggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagctagaattttaatagggctttttagtccggcccttaaaaattcggtacccg 29508041  T
Q  253 atagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  29508042 ttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 29508089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 22791951 - 22791769
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagccc-gattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||| ||||| || | || || |||| | ||||||||| ||||| |||||||| | |||||||||||||||| ||||||||||||||||     
T  22791951 tagagctgtcaaaatgggccaggtcttacgggccggtccgtttagccccgattatttatagggctcgggccttaaatattgaacccgaattttaataggg 22791852  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccg-agggtagcccgctagcccgcataac 300  Q
     ||||||| ||| ||||||||| || | || ||| ||||||||||||||||||||||  |||||||||| |||||||||||||    
T  22791851 ttttttagcccgaccctaaaaaacctggtacccgttagggctagcccgaacgggccgcggggtagcccgttagcccgcataac 22791769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 42976699 - 42976845
Alignment:
Q  154 ggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccga 253  Q
    |||| ||||||||| ||||||||||||| ||||| |||||||||||| ||| |||||||||||| |||||||| | ||||||||||||   | || ||      
T  42976699 ggcccgtttagcccaattaattatagggcttgggtcttaaatattgagcccaaattttaatagggctttttagcctggccctaaaaagataggtacccat 42976798  T
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  42976799 tagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 42976845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 40685758 - 40685633
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| ||||||||  ||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  40685758 tagagctgtcaaaacgggccggtccgtatgggtcggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 40685659  T
Q  220 tttttagtccggccctaaaaagcccg 245  Q
    ||||||| ||| |||| |||||||||    
T  40685658 tttttagcccgacccttaaaagcccg 40685633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 2370907 - 2370735
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| ||| |||||||||||    ||   ||||| ||||||||||||||||||||||| |||||||||||| || ||||||||||||| |    
T  2370907 tagagctgtcaaaatgggtcgggccgtatgagatggttcgtttaacccgattaattatagggtttgggtcttaaatattgagcctgaattttaatagggc 2370808  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcc 292  Q
    |||||||  ||||||||||||| ||| ||  || ||||||||||||||||| |||| ||||||| | ||||||    
T  2370807 tttttagctcggccctaaaaagtccggtactcgttagggctagcccgaacgagccgcgggtagcgccctagcc 2370735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 3319143 - 3319007
Alignment:
Q  164 gcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagc 263  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||   |||||| |||||||||||||||||| || ||| ||||||||||    
T  3319143 gcccgattaattatagggcttgggtcttaaatattgagcccgaattttaatagggtcttttagcccggccctaaaaagcccggtacccgttagggctagc 3319044  T
Q  264 ccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||| |  ||||||||| |  ||||||||||    
T  3319043 ccgaacgggctgcaggtagcccgtttacccgcataac 3319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 5215687 - 5215835
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| |||||||||||||  | ||||||||| | |||||||||||||| |||||||| || ||||| ||||||||| |||||    
T  5215687 ccggcccgtttagcccgaataaatatagggtttgggtttaaaatattgagctcgaattttaatagggctttttagcccagcccttaaaagcccggtatcc 5215786  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||||  |||| |||||| |||||||||| ||||| |||||||    
T  5215787 gttagggctagttcgaatgggccgcgggtagcccgttagcctgcataac 5215835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 47099118 - 47099285
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||| ||| ||||||||||||| | ||| || ||||||||| | ||| ||||||| || ||||| ||||||||| |||||||||||| ||| |    
T  47099118 tagagctgtcacaacaggccgggccgtataggccgacccgtttagcccaaataaatatagggcttaggcctaaaatattgagcccgaattttaacagggc 47099217  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||||||| |||  || | || ||| |||||||||||||||||||||  |||||||||||    
T  47099218 tttttagcccggcccttaaatacctggtacccgttagggctagcccgaacgggccacgggtagcccgc 47099285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 48137359 - 48137246
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    ||||||||||||||||||||||||||||||||| | | |  ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||    
T  48137359 actagagctgtcaaaacgggccgggccgtatgggcagactcgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagg 48137260  T
Q  218 actttttagtccgg 231  Q
     |||||||| ||||    
T  48137259 gctttttagcccgg 48137246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 31325368 - 31325514
Alignment:
Q  154 ggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccga 253  Q
    |||| ||||||||||| ||||||||| | ||||||||||||||||||  ||||||| |||||||  ||||||| ||||| |||||||  | | || ||||    
T  31325368 ggcccgtttagcccgaataattatagcgcttgggccttaaatattgagtccgaattgtaatagggttttttagcccggcactaaaaactctggtacccga 31325467  T
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||| |||| | |||||||||  |||||||||||||    
T  31325468 tagggctagcccgaatgggctgcgggtagcccattagcccgcataac 31325514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 30439734 - 30439827
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccg 252  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||||| | ||||||    
T  30439734 gtttaccccgattaattatagggcttgggccttaaatgttgagcccgagtttttataggactttttagtccggccctaaaaagcctggtatccg 30439827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 297
Target Start/End: Original strand, 36863263 - 36863400
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||| ||||||||||||| | |||||||||||||||||| ||| |||||| ||||| ||||| || |||||||||||| ||| | || ||| ||||||    
T  36863263 tttagcacgattaattatagagcttgggccttaaatattgagccctaatttttatagggcttttcagcccggccctaaaaggccaggtacccgttagggc 36863362  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcat 297  Q
    ||| |||||||||||| ||||| |||| || |||||||    
T  36863363 tagtccgaacgggccgcgggtatcccgttaacccgcat 36863400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 297
Target Start/End: Original strand, 23108540 - 23108684
Alignment:
Q  153 cggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccg 252  Q
    ||||| |||||| || ||||||||||||| || ||||||||||||| | || |||||||||||||| ||||||| |||| ||||||||| | | ||||||    
T  23108540 cggcccgtttagtccaattaattatagggcttaggccttaaatattcagccggaattttaataggattttttagcccggtcctaaaaagtctggtatccg 23108639  T
Q  253 atagggctagcccgaacgggccgagggtagcccgctagcccgcat 297  Q
     || |||||| ||||||||| ||  |||||| || ||||||||||    
T  23108640 ttatggctagtccgaacgggtcgtaggtagcacgttagcccgcat 23108684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 9697133 - 9696997
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||            ||||||| ||||||||| || ||    
T  9697133 ccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatag------------cggcccttaaaagcccggtaccc 9697046  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  9697045 gttagggctagcccgaatgggccgcgggtagtccgttagcccgcataac 9696997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 149 - 266
Target Start/End: Complemental strand, 33590396 - 33590279
Alignment:
Q  149 ggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgcta 248  Q
    ||||||||| ||||||||||| ||| ||||| | |||||||| ||||||| | |||||||||||||||| |||||||| |||||||| |||||| || ||    
T  33590396 ggaccggcccgtttagcccgaataaatatagagcttgggcctaaaatatttagcccgaattttaatagggctttttagcccggcccttaaaagctcggta 33590297  T
Q  249 tccgatagggctagcccg 266  Q
     ||  |||||||||||||    
T  33590296 cccattagggctagcccg 33590279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 18834338 - 18834231
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||||||||||||||| ||| | ||||||||||||    ||||||||||||| |||||||| | ||||||||||||  ||||| ||| |||||    
T  18834338 gtttagcccgattaattatagggcttgagtcttaaatattgagtttgaattttaatagggctttttagcctggccctaaaaagttcgctacccgttaggg 18834239  T
Q  259 ctagcccg 266  Q
    ||||||||    
T  18834238 ctagcccg 18834231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 34182186 - 34182094
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccg 245  Q
    |||||| ||||||||||| ||| |||||||||||||||| |||||||||  || |||||||||||| |||||||| |||||||| |||||||||    
T  34182186 ccggcccgtttagcccgaataaatatagggtttgggcctaaaatattga-gccaaattttaatagggctttttagcccggcccttaaaagcccg 34182094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 46817180 - 46817041
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||  ||||||  |||  ||||||||| ||  || ||  |||||    
T  46817180 gtttagctcgattaattatagggtttgggccttaaatattgagctcgaattttaatagg-ttttttaacccgatcctaaaaagtccagtacccattaggg 46817082  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||| ||||  |||||  |||||||||| |||||||||||||    
T  46817081 ctag-ccgagagggccatgggtagcccgttagcccgcataac 46817041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 300
Target Start/End: Original strand, 8632772 - 8632903
Alignment:
Q  169 attaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaa 268  Q
    ||||||||||||||||||||||||||| || | |||||||||| |||||  ||||||| |||    | ||||||| | || ||| |||||||||||||||    
T  8632772 attaattatagggtttgggccttaaattttaagcccgaatttttatagggatttttagcccgagattgaaaagcctggtacccgttagggctagcccgaa 8632871  T
Q  269 cgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||| |||| || | ||||||||    
T  8632872 cgggccgcgggtaacccgttacctcgcataac 8632903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 300
Target Start/End: Complemental strand, 10013435 - 10013252
Alignment:
Q  116 caactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaata 215  Q
    |||||||||||||||||| ||||  | ||| |||| || ||  ||| | ||||||||| |||| || |||||||||||||||||| |||  ||||| |||    
T  10013435 caactagagctgtcaaaatgggctagcccgaatgggccagctcgttaatcccgattaactatacggcttgggccttaaatattgagccctgatttttata 10013336  T
Q  216 ggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || |||||||| || |||||||||||| || || ||| | ||||||||||| |  ||| | | ||| |||| |||||||||||||    
T  10013335 gggctttttag-cccgccctaaaaagcacggtacccgtttgggctagcccgtattggcagtgagtaacccgttagcccgcataac 10013252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 298
Target Start/End: Complemental strand, 49112474 - 49112335
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgat-cccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagg 257  Q
    ||||||||||||||||||||||  ||||||||||| |||| || |||||||||| | ||| | |||||| ||| ||||||||||  || || ||| |||     
T  49112474 gtttagcccgattaattataggtcttgggccttaagtattaatccccgaatttttacagggc-ttttagcccgaccctaaaaagttcggtacccgttaga 49112376  T
Q  258 gctagcccgaacgggccgagggtagcccgctagcccgcata 298  Q
    |||||||||||||||||| | ||| | || |||||||||||    
T  49112375 gctagcccgaacgggccgcgagtatctcgttagcccgcata 49112335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 26996534 - 26996629
Alignment:
Q  166 ccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggcta 261  Q
    |||||||||||||||| ||| ||||||||||||||  ||||||||| |||||| ||||||| ||| ||||||||| || | || ||| ||||||||    
T  26996534 ccgattaattatagggcttgagccttaaatattgagtccgaatttttataggattttttagcccgaccctaaaaaacctggtacccgttagggcta 26996629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 40921677 - 40921631
Alignment:
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  40921677 tagggctagcctgaacgggctgagggtagcccgctagcccgcataac 40921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 7505208 - 7505248
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggcc 157  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  7505208 aactagagctgtcaaaacgggccggcccgtatgggccggcc 7505248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 36643394 - 36643446
Alignment:
Q  214 taggactttttagtccggccctaaaaagcccgctatccgatagggctagcccg 266  Q
    |||| |||||||  |||||||||||||||||| || ||| |||||||||||||    
T  36643394 tagggctttttaccccggccctaaaaagcccggtacccgttagggctagcccg 36643446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 21159012 - 21158832
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| |    
T  21159012 tagagctgtcaaaacgggccgggccgtatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggc 21158913  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||| |||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  21158912 tttttagcccggacctaaaaagcccgctatccgttagggccagcccgaacgggccaagggtagcccgctagcccgcataac 21158832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 18922122 - 18922302
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| |      
T  18922122 tagagctgtcaaaacgggccgggccgtgtgggccggcccgtttagcccgattaattatagggcttgggtcttaaatattgagcccgaattttaatatggt 18922221  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18922222 tttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 18922302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 21162820 - 21162640
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| |    
T  21162820 tagagctgtcaaaacgggccgggccgtatgggcccgcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggc 21162721  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  21162720 tttttagcccggacctaaaaagcccgctacccgttagggccagcccgaacgggccgagggtagcccgctagcccgcataac 21162640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 21151877 - 21151697
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| |    
T  21151877 tagagctgtcaaaacgggccgggccgtatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggc 21151778  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||| ||||||||||| |||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  21151777 tttttagcccggacctaaaaagcctgctacccgttagggccagcccgaacgggccaagggtagcccgctagcccgcataac 21151697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 135 - 300
Target Start/End: Original strand, 17016459 - 17016624
Alignment:
Q  135 gggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccc 234  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||||||    
T  17016459 gggccgggccgtatgggccggcccgtttagcccgattaattatagggattgggccttaaatattgagcccgaattttaatagggctttttagcccggccc 17016558  T
Q  235 taaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||| ||||||    
T  17016559 taaaaagcccgctacccgtttgggctagaccgaacgggccgagggtagcccgctagcccacataac 17016624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 7344836 - 7344656
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |    
T  7344836 tagagctgtcaaaacggaccgggccgtatgggccggcccgtttagcccgattaattatagggattggaccttaaatattgagcccgaattttaatagggc 7344737  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||| | |||||||||||||| ||| |||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  7344736 tttttagcccggacttaaaaagcccgctacccgttagggccagcccgaacggaccgagggtagcccactagcccgcataac 7344656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 24566189 - 24566369
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |    
T  24566189 tagagctgtcaaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggc 24566288  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||||||||| ||| || ||| |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  24566289 tttttagcccggccctaaaaagtccggtacccgttagggcaagcccgaacgggccgcgggtagcccgttagcccgcataac 24566369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 24607225 - 24607405
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |    
T  24607225 tagagctgtcaaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggc 24607324  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||||||||| ||| || ||| |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  24607325 tttttagcccggccctaaaaagtccggtacccgttagggcaagcccgaacgggccgcgggtagcccgttagcccgcataac 24607405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 117 - 300
Target Start/End: Original strand, 39479304 - 39479487
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatag 216  Q
    |||||||||||||||||| ||||||||| || || |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||     
T  39479304 aactagagctgtcaaaacaggccgggccttacgggccggcccgtttagcccgattaattatagggtttggaccttaaatattgagcccgaattttaatat 39479403  T
Q  217 gactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||| |||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| |||||||| ||||    
T  39479404 ggctttttagcccggccctaaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcgtaac 39479487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 17320331 - 17320511
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| |||||| || || |||||| ||||| |||||||||||| |||| |||||||||||||||||| |||| ||||||||||| |    
T  17320331 tagagctgtcaaaacgggtcgggccttacgggccggcccgtttaacccgattaattacagggcttgggccttaaatattgagcccggattttaatagggc 17320430  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  17320431 tttttagcccggccctaaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 17320511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 4725141 - 4725320
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||      
T  4725141 tagagctgtcaaaacggaccgggccgtatgggccggtccgtttagcccgattaattatagggcttaggccttaaatattgagcccgaattttaatagg-g 4725239  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||| ||||||||| |||||| ||| |||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  4725240 tttttagcccggtcctaaaaagtccgctacccgttagggctagcccgaacggaccgagggtagctcgctaacccgcataac 4725320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 26264540 - 26264358
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    |||||||||||||||||||||||| |||||||| |||| | ||||||||||| ||| ||||||| |||||||| || |||||| ||||||||||||||||    
T  26264540 actagagctgtcaaaacgggccggcccgtatgggccggtccgtttagcccgaataaatatagggcttgggcctaaattattgagcccgaattttaatagg 26264441  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     |||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  26264440 gctttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 26264358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 7949874 - 7949694
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||||| ||| |||||||||||||||| ||||||||| ||| ||||||||||||      
T  7949874 tagagctgtcaaaacgggccgggccgtatgggccagcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccaaattttaatagggt 7949775  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| |||||||||||||||||||||| |||||||||| ||| | |||||||    
T  7949774 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagtcagcataac 7949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 7827090 - 7826923
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||| |||| |||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||  |    
T  7827090 tagagctgtcaaaacggaccggaccgtatgggccggcccgtttagctcgattaattatagggcttgggccttaaatattgagcccgaattttaatagtgc 7826991  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| ||  ||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||    
T  7826990 tttttagcccaaccctaaaaagctcgctacccgttagagctagcccgaacgggccgagggtagcccgc 7826923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 14506018 - 14505870
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||| |||||| ||    
T  14506018 ccggcccgtttagcccgattaattatagagcttgggccttaaatattgagcccggattttaatagggctttttagcccggccctaaaaagtccgctaccc 14505919  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  14505918 gttagggttagcccgaacggaccgagggtagcccgctagcccgcataac 14505870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 8320643 - 8320476
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||| | ||  | |||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |    
T  8320643 tagagctgtcaaaacgggccgggtcttacaggccggcccgtttagcccgattaattatagggcttaggccttaaatattgagcccgaattttaatagggc 8320544  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| ||||||||||||||| || ||  || |||||||||||||||||||||| |||||||||||    
T  8320543 tttttagcccggccctaaaaagctcggtactcgttagggctagcccgaacgggccgcgggtagcccgc 8320476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 115 - 298
Target Start/End: Complemental strand, 5361324 - 5361142
Alignment:
Q  115 gcaactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaat 214  Q
    |||| |||||||||||||| ||| |||||||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||    
T  5361324 gcaagtagagctgtcaaaatgggtcgggccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaat 5361225  T
Q  215 aggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcata 298  Q
    ||| |||||||| |||||| | |||||| || || ||| || ||||||||||||||||||| | |||||||| |||||||||||    
T  5361224 agggctttttagcccggccgttaaaagcacggtacccgtta-ggctagcccgaacgggccgcgagtagcccgttagcccgcata 5361142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 16748916 - 16749096
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||  ||||||| ||||||| |||  | ||||||||||| ||| |||||| ||||||||| ||||||||| |||||||||||||||| |    
T  16748916 tagagctgtcaaaataggccgggtcgtatgggccgatctgtttagcccgaataaatataggatttgggcctaaaatattgagcccgaattttaatagggc 16749015  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||| | |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  16749016 ttttttgcccggcccttaaaagcccgatacccgttagggctagcccgaatgggccgcgggtagcccgttagcccacataac 16749096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 28759486 - 28759338
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||    
T  28759486 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtaccc 28759387  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  28759386 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 28759338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 24316511 - 24316678
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| ||||| | | ||||||  ||||| ||||||||| | ||| ||||||||||||||||||||||||||  | ||||||||||||| |    
T  24316511 tagagctgtcaaaatgggccagactgtatgggtcggcccgtttagcccaactaaatatagggtttgggccttaaatattgagtctgaattttaatagggc 24316610  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||| ||||||||| |||||| ||| |||||||||||||||| |||||||||||||||||    
T  24316611 tttttagcccggtcctaaaaagtccgctacccgttagggctagcccgaacaggccgagggtagcccgc 24316678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 115 - 300
Target Start/End: Original strand, 26507193 - 26507378
Alignment:
Q  115 gcaactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaat 214  Q
    |||| ||||||||||||||||||| || || ||||| |||||| ||||||||||| ||| ||||||| |||||||  ||||||||| || ||||||| ||    
T  26507193 gcaattagagctgtcaaaacgggcaggcccatatgggccggcccgtttagcccgaataaatatagggcttgggccgaaaatattgagcctgaattttgat 26507292  T
Q  215 aggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||| |||||||| |||||||| ||||||||| || ||| ||||| ||| ||||| |||||| |||||||||| |||||||||||||    
T  26507293 agggctttttagcccggcccttaaaagcccggtacccgttagggttagaccgaatgggccgcgggtagcccgttagcccgcataac 26507378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 120 - 297
Target Start/End: Original strand, 39048634 - 39048810
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||| ||||||||| || |  | |||| |||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||      
T  39048634 tagagctgtcaaaacaggccgggccttacgtgctggcccgtttagcccgattaattatatggcttgagccttaaatattgaacccgaattttaatagggt 39048733  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcat 297  Q
    ||||||| ||| |||||||||||||| || | | ||||||||| |||||||||||| |||||||||| ||||||||||    
T  39048734 tttttagcccgaccctaaaaagcccggtacctgctagggctag-ccgaacgggccgcgggtagcccgttagcccgcat 39048810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 1840661 - 1840513
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| ||| |||| ||||||||| |||||    
T  1840661 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagcccggtatcc 1840562  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||| |||||||||| |||||| |||||||||| |||||||||||||    
T  1840561 gttaggactagcccgaatgggccgcgggtagcccgttagcccgcataac 1840513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 120 - 266
Target Start/End: Original strand, 7726342 - 7726488
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||   ||| ||||||||||| | | ||||||| ||||| ||| | |||||||||||||||||| ||| ||||||||||||||    
T  7726342 tagagctgtcaaaacgggccaacccgaatggaccggcccgataagcccgaataattgtagagcttgggccttaaatattgagcccaaattttaataggac 7726441  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccg 266  Q
    |||||||||||||||||||||||| | |||||| || ||||||||||    
T  7726442 tttttagtccggccctaaaaagccaggtatccgttatggctagcccg 7726488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 159 - 299
Target Start/End: Original strand, 20122708 - 20122848
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| |||| ||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||| |||||    
T  20122708 gtttagcccgaataaatatagggcttggacctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 20122807  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||||||||| |||||| ||||| |||| ||||||||||||    
T  20122808 ctagcccgaatgggccgcgggtaacccgttagcccgcataa 20122848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 39754368 - 39754541
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||||||||| || | | || ||||||||||||||||||| ||| |||||||||       || || ||||||||||||| |    
T  39754368 tagagctgtcaaaacgggccgggccgtacgggctgacccgtttagcccgattaattattgggcttgggcctt-------gagcctgaattttaatagggc 39754460  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||| ||||||| |||| ||| ||| |||||||||||| |||||||||||||||| | ||||||| |||||||    
T  39754461 tttttagcccggtcctaaaaggccctctacccgttagggctagccctaacgggccgagggtagtctgctagcctgcataac 39754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 27345372 - 27345231
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| |||||| | ||||||||| |||||||||||||||| |||||||| |||||||| |||||| || || ||| ||||     
T  27345372 gtttagcccgaataaatatagggcttgggcataaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgttagga 27345273  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||| |||||| |||||||||| |||||||||||||    
T  27345272 ctagcccgaatgggccgcgggtagcccgttagcccgcataac 27345231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 16653900 - 16654048
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| || ||||||||||||| ||||||||  ||||||| ||||||||  || ||    
T  16653900 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcctgaattttaatagggctttttagcacggcccttaaaagcccagtaccc 16653999  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||| | |||||||||||||    
T  16654000 gttagggctagcccgaatgggccgcgggtagccagttagcccgcataac 16654048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 43320638 - 43320498
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||||||| ||| |||||||||||||| | ||||||||| |||||  |||||||||  |||||||||||||||| ||||||| | || ||| ||||||    
T  43320638 tttagcccgaataaatatagggtttgggcttaaaatattgagcccgatatttaatagggttttttagtccggcccttaaaagcctggtacccgttagggc 43320539  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  43320538 tagcccgaatgggccgcgggtagcccgttagcccgcataac 43320498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 2466422 - 2466287
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||    
T  2466422 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtaccc 2466323  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgc 287  Q
    | || |||||||||||| || ||| |||||||||||    
T  2466322 gttatggctagcccgaatggaccgcgggtagcccgc 2466287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 41203442 - 41203305
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||||||||||||||| |||||||||||||||||| |    ||||||||||| |||||||| ||||||||||| |||| | || | | |||||    
T  41203442 gtttagcccgattaattatagggcttgggccttaaatattgagc----attttaatagggctttttagcccggccctaaagagccgggtacctgttaggg 41203347  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||||| |||||||| | ||| |||||||||    
T  41203346 ctagcccgaacgggccgcgggtagcctgttagtccgcataac 41203305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 38063066 - 38062942
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| || ||||||||||||||||| || ||||| ||||| ||| |||||||||||||||| ||||||||| | |||||||||||||| |    
T  38063066 tagagctgtcaaaatggaccgggccgtatggaccgacccgtttaacccgaataaatatagggtttgggcctaaaatattgagctcgaattttaatagg-c 38062968  T
Q  220 tttttagtccggccctaaaaagcccg 245  Q
     |||||| |||||||| |||||||||    
T  38062967 cttttagcccggcccttaaaagcccg 38062942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 7074103 - 7073962
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||| |||| ||| ||||||| ||| |||| ||||||||| ||||||||||||||||| ||||||| |||| ||| ||||| ||| || ||  |||||    
T  7074103 gtttagtccgaataaatatagggcttgagcctaaaatattgagcccgaattttaataggattttttagaccggtccttaaaagtccggtacccattaggg 7074004  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||| |||||||||||| |||||||||| ||||| |||||||    
T  7074003 ctagtccgaacgggccgcgggtagcccgttagcctgcataac 7073962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 19647014 - 19646925
Alignment:
Q  211 taataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| |||| ||||||    
T  19647014 taatagggctttttagcccggccctaaaaagcccgctacccgttagggctagcccaaacgggccgagggtagcccgctggcccacataac 19646925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 39087644 - 39087768
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| ||||||| |||||||| ||| ||   |||||| ||||||||||||||||||||||||||||||||| | || ||||||||||| |    
T  39087644 tagagctgtcaaaaggggccgg-ccgtatgggccgacccaattagcctgattaattatagggtttgggccttaaatattgagctcggattttaatagggc 39087742  T
Q  220 tttttagtccggccctaaaaagcccg 245  Q
    ||||||  |||| |||||||||||||    
T  39087743 tttttaacccggtcctaaaaagcccg 39087768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 146 - 282
Target Start/End: Complemental strand, 2800750 - 2800615
Alignment:
Q  146 tatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccg 245  Q
    ||||| |||||| ||||||||| | ||| |||||||||||||||| ||||||||| || ||||||||||||| | ||||||  ||||||| |||||||||    
T  2800750 tatgggccggcccgtttagcccaaataaatatagggtttgggcctaaaatattgagcc-gaattttaatagggccttttagctcggcccttaaaagcccg 2800652  T
Q  246 ctatccgatagggctagcccgaacgggccgagggtag 282  Q
     || ||| |||| ||||||||||||||||| ||||||    
T  2800651 gtacccgttaggtctagcccgaacgggccgcgggtag 2800615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 146 - 282
Target Start/End: Complemental strand, 2806919 - 2806784
Alignment:
Q  146 tatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccg 245  Q
    ||||| |||||| ||||||||| | ||| |||||||||||||||| ||||||||| || ||||||||||||| | ||||||  ||||||| |||||||||    
T  2806919 tatgggccggcccgtttagcccaaataaatatagggtttgggcctaaaatattgagcc-gaattttaatagggccttttagctcggcccttaaaagcccg 2806821  T
Q  246 ctatccgatagggctagcccgaacgggccgagggtag 282  Q
     || ||| |||| ||||||||||||||||| ||||||    
T  2806820 gtacccgttaggtctagcccgaacgggccgcgggtag 2806784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 120 - 240
Target Start/End: Complemental strand, 9528782 - 9528662
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| |||||| | |||| || | |||  ||||| ||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |    
T  9528782 tagagctgtcaaaatgggccgagtcgtacgggctggctcgtttaacccgattaattatagggcttggaccttaaatattgagcccgaattttaatagggc 9528683  T
Q  220 tttttagtccggccctaaaaa 240  Q
    || |||| |||||||||||||    
T  9528682 ttgttagcccggccctaaaaa 9528662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 1463062 - 1463208
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||    |||||||| |||||||||  ||||||||||||||| |||||||| ||||||||   ||||||| || ||    
T  1463062 ccggcccgtttagcccgaataaatataaaacttgggcctaaaatattgagtccgaattttaatagggctttttagcccggccct--taagcccggtaccc 1463159  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| ||| ||| |||||    
T  1463160 gttagggctagcccgaatgggccgcgggtagcccgttagtccgtataac 1463208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 36682859 - 36682731
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||| ||| ||| ||||||| ||||| || ||||||||| |||||||||||||||| |||||||| ||||| || ||||| ||| || ||  |||||    
T  36682859 gtttagctcgagtaaatatagggcttgggtctaaaatattgagcccgaattttaatagggctttttagcccggctcttaaaagtccggtacccactaggg 36682760  T
Q  259 ctagcccgaacgggccgagggtagcccgc 287  Q
    |||||||||| |||||  |||||||||||    
T  36682759 ctagcccgaatgggccacgggtagcccgc 36682731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 8321752 - 8321827
Alignment:
Q  225 agtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| |||||| ||||||    
T  8321752 agtccggccctaaaaagcccgatacccgttagggctagcccgaacgggccgcgggtagcccgttagcccacataac 8321827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 5494668 - 5494750
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaag 241  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||| |||| |||||    
T  5494668 gtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaag 5494750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 8321673 - 8321752
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattga 200  Q
    ||||||||||||||||||| ||||| ||| |  ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  8321673 tagagctgtcaaaacgggc-gggccttataggtcggcccgtttagcccgattaattatagggcttgggccttaaatattga 8321752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 39088999 - 39089070
Alignment:
Q  228 ccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||||||| ||||||||| |||||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  39088999 ccggcccttaaaagcccggtatccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 39089070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 299
Target Start/End: Complemental strand, 31878209 - 31878069
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||| | ||| |||||||||||||| | |||||||||||| | |||||||| |||||  ||||||| |||  ||| |||| |||| || ||| |||||    
T  31878209 gtttagtctgatcaattatagggtttgagtcttaaatattgagctcgaatttttatagggttttttagcccgatcctcaaaatcccggtacccgttaggg 31878110  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
     |||||||||| ||  | ||||||| || ||||| ||||||    
T  31878109 atagcccgaaccggttgcgggtagctcgttagcctgcataa 31878069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 6286175 - 6286247
Alignment:
Q  228 ccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||| || ||||||||| || |||  |||||||||||||| |||||| |||||| ||| |||||||||||||    
T  6286175 ccggctcttaaaagcccggtacccgtaagggctagcccgaatgggccgcgggtagtccgttagcccgcataac 6286247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 39088948 - 39089001
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccg 205  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||    
T  39088948 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgaacccg 39089001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 10642178 - 10642138
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggcc 157  Q
    ||||||||||||||||| ||||||||||||| || ||||||    
T  10642178 aactagagctgtcaaaatgggccgggccgtaagggccggcc 10642138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 3994992 - 3995172
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||| || ||||||||||||||| |||||||||||||||| |    
T  3994992 tagagctgtcaaaacgggccgggccgtatgggccggcccatttagcccgattaaatatagggcttaggccttaaatattgagcccgaattttaatagggc 3995091  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3995092 tttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 3995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 3974885 - 3974705
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||| || ||||||||||||||| |||||||||||||||| |    
T  3974885 tagagctgtcaaaacgggccgggccgtatgggccggcccatttagcccgattaaatatagggcttaggccttaaatattgagcccgaattttaatagggc 3974786  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3974785 tttttagcccggccctaaaaatcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 3974705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 29522951 - 29522784
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |    
T  29522951 tagagctgtcaaaacgggccgggccctatgggccggcccgtttagcccgattaattatagggtttgggccttaaatattgagtccgaattttaatagggc 29522852  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  29522851 tttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacaggccgagggtagcccgc 29522784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 1460439 - 1460258
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||| | |||||| ||||||| |||||||||||||||||| |||||||||||||||      
T  1460439 ctagagctgtcaaaacggaccgggccgtatgggccggcccgtttagtctgattaaatatagggcttgggccttaaatattgagcccgaattttaatagag 1460340  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  1460339 ctttttagcccggccctaaaaagcccgctatccgttagggctagcccgaacgggccgagggtagcccgctatcccgaataac 1460258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 54313498 - 54313318
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||| || || || ||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |    
T  54313498 tagagctgtcaaaacgggccgggccttacgggccagcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggc 54313399  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||||||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  54313398 tttttagcccggccctaaaaagcccggtacccgttagggctagcccgaaagggccgcgggtagcccgttagcccgcataac 54313318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 119 - 300
Target Start/End: Original strand, 41933240 - 41933421
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||     
T  41933240 ctagagctgtcaaaacgggccgggccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 41933339  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||| || |||||||| ||||||||| || ||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  41933340 cttttcagcccggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 41933421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 49318267 - 49318447
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||      
T  49318267 tagagctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggt 49318366  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||  ||||||||| ||| ||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  49318367 tttttaacccggccctataaaacccgctacccgttagggctaacccgaacgggccgagggttgcccgctagcccgcataac 49318447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 7910312 - 7910131
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||     
T  7910312 ctagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 7910213  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  7910212 ctttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 7910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 32774595 - 32774414
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||||| |||| | || || |||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||     
T  32774595 ctagagctgtcaaaacgggtcgggtcttacgggccggcccgtttagcccgattaattataggacttgggccttaaatattgagcccgaattttaataggg 32774496  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||||||||||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  32774495 ctttttagcccggccctaaaaagcccggtacccgttagggctagcccgaaagggccgcgggtagcccgttagcccacataac 32774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 119 - 300
Target Start/End: Original strand, 36638060 - 36638241
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||||| || |||||||||||| || ||| ||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||     
T  36638060 ctagagctgtcaaaacaggtcgggccgtatgggccagcccgtttagcccgattaaatatagggcctgggccttaaatattgagcccgaattttaataggg 36638159  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| | ||||||||||| || |||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  36638160 ctttttagcctggccctaaaaaacctgctgcccgttagggctagcccgaacgggccgagggtagcccgctagcctgcataac 36638241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 12768564 - 12768731
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||| |||||||||||||||| || || |||||| ||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||| |    
T  12768564 tagagctggcaaaacgggccgggccttacgggccggcccgtttaacccgattaattatagggcttgggctttaaatattgagcccgaattttaatagggc 12768663  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| | |||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  12768664 tttttagcctggccctaaaaagcccggtatccgttagggctagcccgaacgggtcgcgggtagcccgc 12768731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 42481170 - 42480988
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    |||||||||||||||| ||| |||||| || ||  ||| | ||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  42481170 actagagctgtcaaaatgggtcgggccttacgggtcggaccgtttagcccgattaattatagggcttgggccttaaatattgagcccggattttaatagg 42481071  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     |||||||| |||||||||||||||||| || ||| ||| |||||| ||||||||||| |||||||||| |||||||||||||    
T  42481070 gctttttagcccggccctaaaaagcccgatacccgttagagctagctcgaacgggccgcgggtagcccgttagcccgcataac 42480988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 121 - 287
Target Start/End: Complemental strand, 51885457 - 51885296
Alignment:
Q  121 agagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggact 220  Q
    ||||||||||||||||| ||||| |||||| ||     ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| ||    
T  51885457 agagctgtcaaaacgggtcgggctgtatgggcc-----gtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggct 51885363  T
Q  221 ttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    |||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  51885362 ttttagcccggccctaaaaagtccgctacccgttagggctagcccgaacgggccgagggtagcccgc 51885296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 24570225 - 24570405
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||| ||||||||| ||||  |||||| |||| |  |||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||| |      
T  24570225 tagagctgccaaaacgggtcgggttgtatgggccggtccatttaacccgattaaatatagggtttgggccttaaataatgagcccgaattttaataaggt 24570324  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||| ||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  24570325 tttttagtccggtcctaaaaagtccgctacccgttagggctagcccgaacgggccgagggtagcccgctagtccgcataac 24570405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 146 - 300
Target Start/End: Complemental strand, 35603964 - 35603810
Alignment:
Q  146 tatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccg 245  Q
    ||||| ||| || ||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||  ||||||| ||| || |||||||||||    
T  35603964 tatggcccgacccgtttagcccgattaattatagggcttgggccttaaatattgagccggaattttaataggggtttttagcccgaccttaaaaagcccg 35603865  T
Q  246 ctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  35603864 ctacccgaacgggctagcccgaacgggccgagggtagcccgctagcccgcataac 35603810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 49506100 - 49506226
Alignment:
Q  122 gagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactt 221  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||    
T  49506100 gagctgtcaaaacgggtcgggctgtatggaccggcccgtttagcccgattaattatagggtttgggccttaaatattgagcctgaattttaatagggctt 49506199  T
Q  222 tttagtccggccctaaaaagcccgcta 248  Q
    |||||||||||| ||||||||||||||    
T  49506200 tttagtccggccttaaaaagcccgcta 49506226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 1694942 - 1695122
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||  ||||||| | |||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  1694942 tagagctgtcaaaacgggccggctcgtatgggctggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 1695041  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| |||| |||| || ||  ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  1695042 tttttagcccggcccttaaaaacccggtaccctttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 1695122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 44310247 - 44310395
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||| ||  |||||||||||| |||||||    
T  44310247 ccggcccgtttagctcgattaattatagggcttgtgccttaaatattgagcccgaattttaatagggctttttagcccaaccctaaaaagcctgctatcc 44310346  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||| |||||||||||||||||||| |||||||||||||||||    
T  44310347 gttagggctaacccgaacgggccgagggtagtccgctagcccgcataac 44310395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 119 - 300
Target Start/End: Original strand, 43087932 - 43088113
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||||| ||||  |||||| |||||  ||||||||| | ||| |||||||||||||||| ||||||||| ||| ||||||||||||     
T  43087932 ctagagctgtcaaaacgggtcgggttgtatgggccggctcgtttagcccaaataaatatagggtttgggcctaaaatattgagcccaaattttaataggg 43088031  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||||||| ||||||||| || ||| ||||||||||||||||||||||  ||||||||| ||| |||||||||    
T  43088032 ctttttagcccggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcaggtagcccgttagtccgcataac 43088113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 33911619 - 33911791
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||| | ||||||||||| ||| ||||||| || ||||| ||||||||| ||||||||||||||||||    
T  33911619 tagagctgtcaaaacgggccggcccgtatgggccggtccgtttagcccgaataaatatagggcttaggcctaaaatattgagcccgaattttaataggac 33911718  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcc 292  Q
    ||||||| |||||||| ||||| ||| || ||| ||||||||| ||||| |||||| |||||||||| |||||    
T  33911719 tttttagcccggcccttaaaagtccggtacccgttagggctagtccgaatgggccgcgggtagcccgttagcc 33911791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 26823011 - 26823162
Alignment:
Q  149 ggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgcta 248  Q
    ||||||||| ||||||||||| ||| ||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| ||    
T  26823011 ggaccggcccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggta 26823110  T
Q  249 tccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  26823111 cccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 26823162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 269
Target Start/End: Original strand, 39620438 - 39620587
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||| || |    
T  39620438 tagaactgtcaaaacgggacgggccgtatgggccggcccgtttagcccaattaattatagggcttgggccttaaatattgagcccaaattttaatggggc 39620537  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaac 269  Q
    ||||||| ||||||||||||||| || |||||| || |||||||||||||    
T  39620538 tttttagcccggccctaaaaagctcggtatccgttaaggctagcccgaac 39620587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 26898214 - 26898362
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||||||| ||||| ||| || ||    
T  26898214 ccggcccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtaccc 26898313  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||||||||||||||||| |||||||||| |||||||||||||    
T  26898314 gttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 26898362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 31412286 - 31412107
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||| |  ||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  31412286 tagagctgtcaaaacgggccggcccgtatagggcggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 31412187  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| |||| |||| || ||  ||||||||||||||| |||||  |||||||||| |||||||||||||    
T  31412186 tttttagcccggcccttaaaaacccggtacccattagggctagcccgaa-gggccacgggtagcccgttagcccgcataac 31412107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 120 - 291
Target Start/End: Complemental strand, 17525472 - 17525302
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||| || ||| ||||||| ||||| || ||||||||| |||||||||||||||| |    
T  17525472 tagagctgtcaaaacgtgccggcccgtatggaccggcccgtttagcc-gaataaatatagggcttgggtctaaaatattgagcccgaattttaatagggc 17525374  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagc 291  Q
    ||||||| ||||| || ||||||||| ||||||  |||||||||||||| |||||| |||||||||| ||||    
T  17525373 tttttagcccggctcttaaaagcccggtatccgtcagggctagcccgaatgggccgcgggtagcccgttagc 17525302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 120 - 299
Target Start/End: Complemental strand, 39095406 - 39095227
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||| | ||| ||||| | |||||| |||||||||||  || |||||||||||||||| ||||||||| |||||||||||||||  |    
T  39095406 tagagctgtcaaaacggactgggtcgtataggccggcccgtttagcccgaaaaaatatagggtttgggcctaaaatattgagcccgaattttaatagagc 39095307  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    ||||||  |||||||| |||| |||| || ||| |||||||||||||||||| ||| |||||||||| ||||||||||||    
T  39095306 tttttaacccggcccttaaaaacccggtacccgttagggctagcccgaacggaccgcgggtagcccgttagcccgcataa 39095227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 9301174 - 9301033
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| |||||||| ||||||||| || ||||||||||||| |||||||| |||||||| ||||||||| || ||| |||||    
T  9301174 gtttagcccgaataaatatagggcttgggcctaaaatattgagccggaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 9301075  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  9301074 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 9301033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 41879535 - 41879387
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||| |||||||| |||||||||||||| | | || ||    
T  41879535 ccggcccgtttagcccgattaattatagggtttggaccttaaatattgagtccgaaatttaatagggctttttagcccggccctaaaaagtctggtaccc 41879436  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  41879435 gttagggctagcccgaaagggccgcgggtagcccgttagcccacataac 41879387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 55423712 - 55423860
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||  ||||||| |||||||| ||||||||| || ||    
T  55423712 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccggtaccc 55423811  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  55423812 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 55423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 51744110 - 51744252
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaata-ggactttttagtccggccctaaaaagcccgctatccgatagg 257  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||||||| ||||||||||||||| || || ||  ||||    
T  51744110 gtttaacccgattaattatagggtttgggccttaaatgttgaacccgaattttaatagggtctttttagcccggccctaaaaagctcggtacccattagg 51744209  T
Q  258 gctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||||||| | |||||||||| |||||||||||||    
T  51744210 gctagcccgaacgggctgcgggtagcccgttagcccgcataac 51744252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 1842534 - 1842682
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||||||||| || ||||||||| |||||||||||||| | |||||||| |||||||| ||||||||| || ||    
T  1842534 ccggcccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatatggctttttagcccggcccttaaaagcccggtaccc 1842633  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| ||| || |||||||||| |||||||||||||    
T  1842634 gttagggctagcccgaatgggtcgcgggtagcccgttagcccgcataac 1842682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 299
Target Start/End: Complemental strand, 44845370 - 44845231
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| |||||  ||| ||||||| || ||| ||||||    
T  44845370 tttagcccgattaattatagggtttgggttttaaatattgagcccgaattttaataggactttttagcccggctttaagaagcccggtacccgttagggc 44845271  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||||||||||||| |  ||||||||| |||| |||||||    
T  44845270 tagcccgaacgggctgcaggtagcccgttagctcgcataa 44845231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 120 - 262
Target Start/End: Complemental strand, 41209537 - 41209396
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |    
T  41209537 tagagctgtcaaaacgggccgggtcgtacggaccagcccgtttaacccgattaattatagg-tttgggctttaaatattgagcccgaattttaatagggc 41209439  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctag 262  Q
    ||||||| ||| |||||||||| ||| || ||| |||||||||    
T  41209438 tttttagcccgaccctaaaaagtccggtacccgttagggctag 41209396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 10804657 - 10804509
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||| |||||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||  || ||    
T  10804657 ccggcccgtttagcccgaataaatatagagtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccagtaccc 10804558  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| | |||  |||||||||| |||||||||||||    
T  10804557 gttagggctagcccgaatgagccacgggtagcccgttagcccgcataac 10804509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 50155665 - 50155517
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| ||||| || ||||||||| ||| |||||||||||| |||||||| ||| |||| ||||||||| || ||    
T  50155665 ccggcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccaaattttaatagggctttttagcccgacccttaaaagcccggtaccc 50155566  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  50155565 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 50155517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 120 - 274
Target Start/End: Original strand, 28970528 - 28970683
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggacc-ggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||||||| |||||| ||||| || |||| |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||| |     
T  28970528 tagagctgtcaaaacgggtcgggccatatgggcccggcccgtttagcccgattatttatagggcttgggccttaaatattgagcccgaattttaataagg 28970627  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggcc 274  Q
    |||||||  |||| ||| ||||||||| || ||| ||||||||| | |||||||||    
T  28970628 ctttttaccccggtcctgaaaagcccggtacccgttagggctagtctgaacgggcc 28970683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 10267812 - 10267949
Alignment:
Q  129 caaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtc 228  Q
    ||||| |||| ||||||||||| |||||| ||||||||||| ||| ||||||| | |||||| ||||||||| |||||||||||||||| |||||||| |    
T  10267812 caaaatgggctgggccgtatgggccggcccgtttagcccgaataaatatagggctcgggcctaaaatattgagcccgaattttaatagggctttttagcc 10267911  T
Q  229 cggccctaaaaagcccgctatccgatagggctagcccg 266  Q
    ||||||| ||||||||| || ||| |||||||||||||    
T  10267912 cggcccttaaaagcccgttacccgttagggctagcccg 10267949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 33215357 - 33215522
Alignment:
Q  122 gagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactt 221  Q
    |||||||||||| ||||||||||| |||| | || | |||||||| || ||| ||||||||||||| || ||||||||| |||||||||||||||| |||    
T  33215357 gagctgtcaaaatgggccgggccgaatgggcggggccgtttagccggaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctt 33215456  T
Q  222 tttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||| |||||||| |||||  || || | | ||||||||||||||| |||||| |||||||||||    
T  33215457 tttagcccggcccttaaaagttcggtacctgttagggctagcccgaatgggccgcgggtagcccgc 33215522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 1557471 - 1557332
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||||||||||||||||||||||||| |||||||||| |   ||||||||||||||| ||||||||||||||||||||||  || || ||  ||||||    
T  1557471 tttagcccgattaattatagggtttgggtcttaaatattaagatcgaattttaataggattttttagtccggccctaaaaagttcggtaccccttagggc 1557372  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||| ||||| ||||| || ||||||| |||||||||||||    
T  1557371 tagctcgaac-ggccgcggatagcccgttagcccgcataac 1557332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 7399697 - 7399833
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccg-ctatc 250  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||  |  |    
T  7399697 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgattccc 7399796  T
Q  251 cgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    || ||||||||||||||| |||||| |||||||||||    
T  7399797 cgttagggctagcccgaatgggccgcgggtagcccgc 7399833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 14741114 - 14741005
Alignment:
Q  175 tatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggcc 274  Q
    |||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||  |||| ||||||||| || ||| |||||||||||||||||||||    
T  14741114 tatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagccctacccttaaaagcccggtacccgttagggctagcccgaacgggcc 14741015  T
Q  275 gagggtagcc 284  Q
    | ||||||||    
T  14741014 gcgggtagcc 14741005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 53468083 - 53468210
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||| ||||||||||||||||| |||||||||||||||| | | |||||||||||||| |||||||| ||| ||||||||||| ||  | ||| || ||    
T  53468083 gtttaacccgattaattatagggcttgggccttaaatattaagcacgaattttaatagggctttttagcccgaccctaaaaagcacggaacccgttatgg 53468182  T
Q  259 ctagcccgaacgggccgagggtagcccgc 287  Q
    |||||||||||||| || |||||||||||    
T  53468183 ctagcccgaacggg-cgggggtagcccgc 53468210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 15489084 - 15489190
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| ||| |||| ||||| | | || ||| ||||||    
T  15489084 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagtctggtacccgttagggc 15489183  T
Q  260 tagcccg 266  Q
    |||||||    
T  15489184 tagcccg 15489190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 28816170 - 28816103
Alignment:
Q  232 ccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  28816170 cccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 28816103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 30105871 - 30105823
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattga 200  Q
    |||||| ||||||||||| ||| ||||||| |||||||| |||||||||    
T  30105871 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattga 30105823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 30513117 - 30513188
Alignment:
Q  168 gattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaa 240  Q
    |||||||||||||||||| | ||| |||||||| || ||||||| ||| | |||||||| |||||| ||||||    
T  30513117 gattaattatagggtttgtgtctt-aatattgagcctgaatttttataagtctttttagcccggccataaaaa 30513188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 44922155 - 44922335
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||| |||||||||| || |||||||||||||||||| |||||||||||||||| |    
T  44922155 tagagctgtcaaaacgggccgggccgtatgggccagcccgtttagcccaattaattataaggcttgggccttaaatattgagcccgaattttaatagggc 44922254  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44922255 tttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 44922335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 699871 - 700051
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |    
T  699871 tagagctgtcaaaacggaccgggccgtatgggccgacccgtttagcccgattaattatagggcttgggccttaaatattgagcccaaattttaatagggc 699970  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  699971 tttttagcccgaccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 700051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 50512137 - 50511957
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |    
T  50512137 tagagctgtcaaaatgggccgggccgtatgggccggcccatttagcccgattaattatagggcttggtccttaaatattgagcccgaattttaatagggc 50512038  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  50512037 tttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacgggccaagggtagcccgctagcccgcataac 50511957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 40412675 - 40412495
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |    
T  40412675 tagagctgtcaaaacgggccgggccgtattggccggcccgtttagcccgattaattataaggcttgggccttaaatattgagcccgaattttaatagggc 40412576  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||  ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  40412575 tttttaacccggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcctgctagcctgcataac 40412495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 113 - 300
Target Start/End: Complemental strand, 33815089 - 33814903
Alignment:
Q  113 ttgcaactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaatttta 212  Q
    ||||| ||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  33815089 ttgcagctagagctgtcaaaacgggccaggccgtatgggccggtccgtttagcccgattaattatagggcttgg-ccttaaatattgaacccgaatttta 33814991  T
Q  213 ataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || || |||||||| ||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33814990 atggggctttttagcccgaccctaaaaagtccgctacccgttagggctagcccgaacgggccgagggtagcccgttagcccgcataac 33814903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 113 - 300
Target Start/End: Complemental strand, 33874559 - 33874373
Alignment:
Q  113 ttgcaactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaatttta 212  Q
    ||||| ||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  33874559 ttgcagctagagctgtcaaaacgggccaggccgtatgggccggtccgtttagcccgattaattatagggcttgg-ccttaaatattgaacccgaatttta 33874461  T
Q  213 ataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || || |||||||| ||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33874460 atggggctttttagcccgaccctaaaaagtccgctacccgttagggctagcccgaacgggccgagggtagcccgttagcccgcataac 33874373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 5114871 - 5115049
Alignment:
Q  122 gagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactt 221  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||| | |||||||||||||||| |||    
T  5114871 gagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattaagcccgaattttaatagggctt 5114970  T
Q  222 tttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  5114971 tttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 5115049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 40601890 - 40601710
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||| ||||| ||||| ||| |||||||||||||||| ||||||||| |||||||||||||||  |    
T  40601890 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttaacccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagagc 40601791  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||  ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  40601790 tttttagcccggcccttaaaagcccggtacccattagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 40601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 48812696 - 48812516
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| ||| || ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  48812696 tagagctgtcaaaacgggccggcccgtatgggccgtcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 48812597  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||| |||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  48812596 tttttagcccgacccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 48812516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 48940766 - 48940938
Alignment:
Q  120 tagagctgtcaaaacgggccgggccg-----tatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaat 214  Q
    |||||||||||||||||||||| |||     ||||  |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  48940766 tagagctgtcaaaacgggccggaccggaccctatgagccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaat 48940865  T
Q  215 aggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||| |||||||| ||| ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  48940866 agggctttttagcccgaccctaaaaagcccactacccgttagggctagcccgaacgggccgagggtagcccgc 48940938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 119 - 300
Target Start/End: Original strand, 19406609 - 19406790
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||| |||||||| ||||||| |||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||     
T  19406609 ctagagttgtcaaaatgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 19406708  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||||||| ||||||||| || ||| |||||||||| |||| |||||| |||||||||| |||||||||||||    
T  19406709 ctttttagcccggcccttaaaagcccggtacccgttagggctagctcgaatgggccgcgggtagcccgttagcccgcataac 19406790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 44373040 - 44372860
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||| |||| || ||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| || ||||||||||||| |    
T  44373040 tagagctgtcaaaacggaccggcccatatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcctgaattttaatagggc 44372941  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||| ||| |||||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  44372940 tttttagcccggcccttaaaagtccggtatccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 44372860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 35985617 - 35985469
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||| |||||||| |||||||||||||||||| || ||    
T  35985617 ccggcccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttaatagggctttttagcccggccctaaaaagcccggtaccc 35985518  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
      |||||||| ||||||||||||| |||||||||| |||||||||||||    
T  35985517 attagggctaacccgaacgggccgcgggtagcccgttagcccgcataac 35985469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 39995616 - 39995436
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| ||| | |||||| |||| | ||||||||||| ||| |||||||||||||||| ||||||||| | |||||||||||||| |    
T  39995616 tagagctgtcaaaacgggtcggtctgtatgggccggtccgtttagcccgaataaatatagggtttgggcctaaaatattgagctcgaattttaatagggc 39995517  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| | |||||||| |||||||||||||    
T  39995516 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgagtagcccgttagcccgcataac 39995436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 28199181 - 28199348
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| | |||||| |||||| ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||| |||||| |    
T  28199181 tagagctgtcaaaacgggccggcctgtatgggccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaatttgaatagggc 28199280  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||||||| ||||||||| || ||| |||||||||| |||| |||||| |||||||||||    
T  28199281 tttttagcccggcccttaaaagcccggtacccgttagggctagctcgaatgggccgcgggtagcccgc 28199348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 119 - 299
Target Start/End: Complemental strand, 48606000 - 48605821
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||| |||| ||| ||||| |||||  |||| | |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48606000 ctagagctgttaaaatgggtcgggctgtatgtgccggtccgtttattccgattaattatagggtttgggccttaaatattgagcccgaattttaatagga 48605901  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||||||| |||||| ||||||| ||| ||| || ||||||||| |||||||||||| || ||||||| ||||||||||||    
T  48605900 ctttttagcccggccttaaaaagtccggtat-cgttagggctagtccgaacgggccgcggatagcccgttagcccgcataa 48605821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 30723296 - 30723444
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||  ||||||| |||||||| ||||||||| || ||    
T  30723296 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccggtaccc 30723395  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||||||||||||||||| |||||||||| |||||||||||||    
T  30723396 gttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 30723444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 122 - 275
Target Start/End: Original strand, 42102156 - 42102308
Alignment:
Q  122 gagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactt 221  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||||| ||| ||||||||||||| || ||||||||| |||||||||||||||| |||    
T  42102156 gagctgtcaaaacgggccgggccgtatgggccagcccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctt 42102255  T
Q  222 tttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccg 275  Q
    ||||| |||||||| |||||| || || ||| ||||||||| ||||||||||||    
T  42102256 tttagcccggcccttaaaagctcggtacccgttagggctag-ccgaacgggccg 42102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 41310653 - 41310505
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||  | ||    
T  41310653 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggcaccc 41310554  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  41310553 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 41310505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 45794239 - 45794063
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||| |||||||||| |||||| || || | |||| ||||||| ||||||||||||||| ||| |||||||||||||| | ||||||||||||||      
T  45794239 tagagctatcaaaacgggtcgggccttacgggctggcccgtttagctcgattaattatagggcttgagccttaaatattgagctcgaattttaatagggt 45794140  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||||||||||||      || ||| |||||||||||||||||||||| |||||||||| ||||| |||||||    
T  45794139 tttttagtccggccctaaaaa----tgtacccgttagggctagcccgaacgggccgcgggtagcccgttagccagcataac 45794063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 6715286 - 6715105
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    ||||||| ||||||||  ||| |||||| ||||| ||| | |||||||||||||||||||||| ||||| ||||||||||||| || ||||||||||||     
T  6715286 actagagttgtcaaaattggcagggccggatggatcggtccgtttagcccgattaattatagg-tttggaccttaaatattgagcctgaattttaataga 6715188  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
      ||||||||||||| |||||||||| ||||  || |||||||||  ||||| |||||| |||||||||||||||||| ||||    
T  6715187 tgtttttagtccggctctaaaaagccagctactcgttagggctagttcgaacaggccgaaggtagcccgctagcccgcgtaac 6715105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 1858893 - 1858752
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||| |||||    
T  1858893 gtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 1858794  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || ||||||| ||| || |||||||||| |||||||||||||    
T  1858793 ctggcccgaatgggacgcgggtagcccgttagcccgcataac 1858752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 20722204 - 20722320
Alignment:
Q  171 taattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacg 270  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||| | || ||| |||||||||||||||||    
T  20722204 taattatagggtttaggccttaaatattgagcccgaattttaatagggctttttagcccggccttaaaaagcctggtacccgttagggctagcccgaacg 20722303  T
Q  271 ggccgagggtagcccgc 287  Q
    ||||| |||||||||||    
T  20722304 ggccgcgggtagcccgc 20722320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 25423407 - 25423271
Alignment:
Q  164 gcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagc 263  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||| |||||||| | |||| ||||||||||| || ||| ||||||||||    
T  25423407 gcccgattaattatagagtttgggccttaaatattaagcccgaattttaatagggctttttagcctggccttaaaaagcccggtacccgttagggctagc 25423308  T
Q  264 ccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||   ||||||||| ||||| |||||||    
T  25423307 ccgaacgggccatcggtagcccgttagcctgcataac 25423271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 47034678 - 47034513
Alignment:
Q  122 gagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactt 221  Q
    |||||||||||| ||||||||||| |||| | || | |||||||| || ||| ||||||||||||| || ||||||||| |||||||||||||||| |||    
T  47034678 gagctgtcaaaatgggccgggccgaatgggcggggccgtttagccggaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctt 47034579  T
Q  222 tttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||| |||||||| |||||  || || | | ||||||||||||||| |||||| |||||||||||    
T  47034578 tttagcccggcccttaaaagttcggtacctgttagggctagcccgaatgggccgcgggtagcccgc 47034513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 45826670 - 45826798
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||||||||||||||||| |  ||||| |||||||||||| |||||||||||||||| |||||||| |||| ||||||||| ||| || ||| ||||     
T  45826670 gtttagcccgattaattatatgacttgggtcttaaatattgagcccgaattttaatagggctttttagcccggtcctaaaaagtccggtacccgttagga 45826769  T
Q  259 ctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||||||||||||| |||||||||||    
T  45826770 ctagcccgaacgggccgcgggtagcccgc 45826798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 23974338 - 23974159
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||| ||||| |||||||||||||||  ||||| ||||||| ||| ||| ||||||||||| | || ||||||||| ||||||| |||||||| |    
T  23974338 tagagctgttaaaacaggccgggccgtatgggtcggcccgtttagctcgaataaatatagggtttgtgtctaaaatattgagcccgaatgttaatagggc 23974239  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||  |||||| || || ||| |||||||| ||| ||||||  | |||||||||| ||||| |||||||    
T  23974238 tttttagcccggcccataaaagctcggtacccg-tagggctaacccaaacgggttgcgggtagcccgttagccagcataac 23974159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 21719945 - 21720051
Alignment:
Q  194 atattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagccc 293  Q
    ||||||| || |||||||||||||  ||||||| |||| |||||||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||     
T  21719945 atattgagccggaattttaatagggatttttagcccggtcctaaaaagcccgctacccgttagggctagcctgaacaggccgagggtagcccgctagcct 21720044  T
Q  294 gcataac 300  Q
    |||||||    
T  21720045 gcataac 21720051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 300
Target Start/End: Original strand, 48913590 - 48913724
Alignment:
Q  166 ccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagccc 265  Q
    |||| ||| ||||||| ||||| || ||||||||| || ||||||||||||| |||||||| |||||||| ||||| ||| || ||| ||||||||||||    
T  48913590 ccgaataaatatagggcttgggtctaaaatattgagcctgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttagggctagccc 48913689  T
Q  266 gaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||| |||||| |||||||||| | |||||||||||    
T  48913690 gaatgggccgcgggtagcccgttggcccgcataac 48913724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 52929571 - 52929457
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| ||||||| | || || ||||||||||| ||| ||||||||||||| || ||||||||| ||| ||||||||||||      
T  52929571 tagagctgtcaaaacgggccggaccgtatgaatcgacccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccaaattttaataggga 52929472  T
Q  220 tttttagtccggccc 234  Q
    ||||||| |||||||    
T  52929471 tttttagcccggccc 52929457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 50863973 - 50863857
Alignment:
Q  171 taattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacg 270  Q
    ||||||||||| ||  |||||||||||||| ||| |||||||||||   |||||||| ||||||||||||  |||||| ||| ||||||||| |||||||    
T  50863973 taattatagggcttaagccttaaatattgagcccaaattttaatagagatttttagttcggccctaaaaaatccgctacccgttagggctagtccgaacg 50863874  T
Q  271 ggccgagggtagcccgc 287  Q
    ||||||| |||||||||    
T  50863873 ggccgagagtagcccgc 50863857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 175 - 298
Target Start/End: Complemental strand, 21088631 - 21088508
Alignment:
Q  175 tatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggcc 274  Q
    |||||||||||||| | ||||||||| |||||||||||| ||| |||||||| |||||| | ||||||||| || ||| ||||||||||||||| || ||    
T  21088631 tatagggtttgggcttaaaatattgagcccgaattttaacaggcctttttagcccggcctttaaaagcccggtacccgttagggctagcccgaatggacc 21088532  T
Q  275 gagggtagcccgctagcccgcata 298  Q
    | ||||| |||| |||||| ||||    
T  21088531 gcgggtaacccgttagcccacata 21088508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 39003050 - 39003149
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||| ||| |||||  || |||||| |||||    
T  39003050 gtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagttcgatatccgttaggg 39003149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 269
Target Start/End: Complemental strand, 12255347 - 12255206
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||| |||||||||||||||||||||| || | |||| ||||| | ||||||| ||||||  |||| ||||||||||||| |||||        ||| |    
T  12255347 tagagatgtcaaaacgggccgggccgtacggccgggcccgtttacctcgattaagtataggacttggaccttaaatattgagcccga--------agggc 12255256  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaac 269  Q
    ||||||  |||||||||||||||||| || ||  ||||||||||||||||    
T  12255255 tttttaacccggccctaaaaagcccggtacccattagggctagcccgaac 12255206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 343246 - 343173
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggacttttta 225  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||| ||||||||||| |||||||    
T  343246 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgtattttaatagggcttttta 343173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 38235640 - 38235764
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| ||| |  | ||||||||| ||||||||||||||||  ||||||| ||| |||| ||||| ||| || ||| |||||    
T  38235640 gtttagcccgaataaatatagggcttgagtttaaaatattgagcccgaattttaatagggttttttagcccgacccttaaaagtccggtacccgttaggg 38235739  T
Q  259 ctagcccgaacgggccgagggtagc 283  Q
    |||| ||||| || ||| |||||||    
T  38235740 ctagtccgaatggaccgcgggtagc 38235764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 46868744 - 46868817
Alignment:
Q  153 cggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttag 226  Q
    ||||| ||||| ||| | ||| |||||||||||||||| ||||||||| |||||||||||||| | ||||||||    
T  46868744 cggcccgtttaacccaaataaatatagggtttgggcctaaaatattgagcccgaattttaataaggctttttag 46868817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 343159 - 343113
Alignment:
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  343159 tagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 343113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 25155739 - 25155837
Alignment:
Q  187 gccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagccc 285  Q
    |||| ||||||||| || ||||||||||||| |||| ||| ||| || | ||||||||| ||  || |||||||| ||| ||||||||| |||||||||    
T  25155739 gcctaaaatattgagcctgaattttaatagggctttgtagcccgacctttaaaagcccgatactcgttagggctaacccaaacgggccgcgggtagccc 25155837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 46868816 - 46868876
Alignment:
Q  240 agcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||| |||||| ||||||||||||||| | || | |||||||||| |||||||||||||    
T  46868816 agcccgatatccgttagggctagcccgaatgagctgcgggtagcccgttagcccgcataac 46868876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 31489644 - 31489605
Alignment:
Q  111 gcttgcaactagagctgtcaaaacgggccgggccgtatgg 150  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  31489644 gcttggaactagagctgtcaaaacgggccgggccgaatgg 31489605  T

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Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 40534519 - 40534573
Alignment:
Q  163 agcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    |||| |||||||||||||||||| |||||||||||||| | ||| |||| |||||    
T  40534519 agcctgattaattatagggtttgagccttaaatattgagctcgagtttttatagg 40534573  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 27414050 - 27414139
Alignment:
Q  177 tagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccg 266  Q
    ||||| ||| |||| ||||||||| ||  ||||||||||||  ||| ||| |||||||| |||| |||| |||||  |||||||||||||    
T  27414050 tagggcttgtgcctaaaatattgagcctaaattttaatagggttttgtagcccggcccttaaaaacccggtatccattagggctagcccg 27414139  T

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Target: chr2 (Bit Score: 133; Significance: 5e-69; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 30555605 - 30555785
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| |||  | |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||      
T  30555605 tagagctgtcaaaacgggccgggccgtatgggccgatccgtttagcccgattaattatagggtttggaccttaaatattgagcccgaattttaatagggt 30555704  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  30555705 tttttagcccggccctaaaaagcccgctatccgttagggctagcccgaacggaccgagggttgcccgctagcccgcataac 30555785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 26984615 - 26984434
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||||     
T  26984615 ctagagctgtcaaaacgggctgggccgtatgggccggcccgtttaccccgattaaatatagggtttgggccttaaatattgagtccgaattttaataggg 26984516  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||  |||||| |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  26984515 ctttttaacccggccttaaaaagcccgctacccattagggctagcccgaacgggccgagggtagcccgctagcccgcataac 26984434  T

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Target: chr2; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 119 - 300
Target Start/End: Original strand, 41644253 - 41644434
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||     
T  41644253 ctagggctgtcaaaacggaccgggccgtatggaccggcccgtttagcccgataaattacagggcttgggccttaaatattgagcccgaattttaataggg 41644352  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| ||| |||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  41644353 ctttttagcccgaccctaaaaagtccgctacccgttaggggtagcccgaacgggccgagggtagcccgctagcccgcataac 41644434  T

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Target: chr2; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 12848011 - 12847831
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| ||| |  ||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||||||     
T  12848011 tagagctgtcaaaacgggccggcccgtatgggccgacacgtttatcccgattaaatatagggcttgggccttaaatattgagcccgaattttaataggat 12847912  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12847911 tttttagcccggccctaaaaagcccactacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 12847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 23334007 - 23334189
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtat--ggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    |||||||||||||||||||||||||  ||  || ||| || ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  23334007 tagagctgtcaaaacgggccgggcccaatagggcccgacccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagg 23334106  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
      ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  23334107 gatttttagtccggccctaaaaagcccgctacccgttagggctagcccgaacggaccgagggtagcccgctagcccgcataac 23334189  T

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Target: chr2; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 118 - 300
Target Start/End: Complemental strand, 10822428 - 10822246
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    |||||||||||||||||||| |||||| || || |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  10822428 actagagctgtcaaaacgggtcgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagg 10822329  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     |||||||| ||||||||||||| |||| || ||| |||||||||||||||||||||| |||||||  | |||||||||||||    
T  10822328 gctttttagcccggccctaaaaaacccggtacccgttagggctagcccgaacgggccgcgggtagcttgttagcccgcataac 10822246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 31618243 - 31618062
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||||||||||||||| ||||| ||| ||  ||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||     
T  31618243 ctagagctgtcaaaacgggccgggccttatgggccgacccatttagcctgattaattatagggcttgggccttaaatattgagcccgaattttaataggg 31618144  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| ||||| |||||||||||| || ||| ||||||||| |||||||||||| |||||||||| |||||||||||||    
T  31618143 ctttttagcccggctctaaaaagcccggtacccgttagggctagtccgaacgggccgcgggtagcccgttagcccgcataac 31618062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 10709709 - 10709889
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| |||||||||||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||||  | ||||||||||||| |    
T  10709709 tagagctgtcaaaatgggccgggccgtatgggctggcccgtttagcccgattaattatagggcttgggccttaaatattgagtctgaattttaatagggc 10709808  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||  ||| |||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  10709809 tttttaacccgaccctaaaaaggccgctacccgttagggctagcccgaacgggccgaaggtagcccgctcgcccgcataac 10709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 115 - 300
Target Start/End: Original strand, 27495841 - 27496026
Alignment:
Q  115 gcaactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaat 214  Q
    |||| ||||||||||||||||| |||| |||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||    
T  27495841 gcaattagagctgtcaaaacggaccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaat 27495940  T
Q  215 aggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||| |||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  27495941 agggctttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 27496026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 2557619 - 2557799
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||| |||||||||||||   ||||| |||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||       
T  2557619 tagagctgtcaaaacgagccgggccgtatgagtcggcccgtttagcctgattaattatagggcttgggccttaaatattgagcccgaattttaatagagt 2557718  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| || |||||||||||||||||| ||| |||||||||||| || ||||||| |||||||||||||||||||||||    
T  2557719 tttttagcccagccctaaaaagcccgctacccgttagggctagcccaaatgggccgatggtagcccgctagcccgcataac 2557799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 25869042 - 25868901
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||  |||||    
T  25869042 gtttagcccgattaattataaggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggtcctaaaaagcccgctatccattaggg 25868943  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  25868942 ctagcccgaacgggccgagggtagcccgctagcccacataac 25868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 31742842 - 31743022
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||  |    
T  31742842 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagagc 31742941  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||  ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  31742942 tttttagcccggcccttaaaagcccggtacccattagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 31743022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 27551937 - 27552104
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||| || || ||| || ||||||||||||||||||||||| |||||| ||||||||||| || ||||||||||||| |    
T  27551937 tagagctgtcaaaacgggccgggccttacgggccgacccgtttagcccgattaattatagggcttgggctttaaatattgagcctgaattttaatagggc 27552036  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||||||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  27552037 tttttagcccggccctaaaaagcccggtacccattagggctagcccgaacgggccgcgggtagcccgc 27552104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 1002654 - 1002473
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||| ||| ||||||||||||  ||||| ||||||||||| ||| |||||||||||||||| ||||||||| | ||||||||||||||     
T  1002654 ctagagctgtcaaaatgggtcgggccgtatgggtcggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagctcgaattttaataggg 1002555  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||||||  ||||||||| || ||| |||||||||||||||||||||| |||||||||  |||||||||||||    
T  1002554 ctttttagcccggcccataaaagcccggtacccgttagggctagcccgaacgggccgtgggtagcccattagcccgcataac 1002473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 34313729 - 34313880
Alignment:
Q  149 ggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgcta 248  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||| |||||||| |||||||||||||| | ||||    
T  34313729 ggaccggcccgtttagcccgattaattatagggcttgggccttaaatattaagcccaaattttaatagggctttttagcccggccctaaaaagtctgcta 34313828  T
Q  249 tccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     ||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  34313829 cccgttagggctagcctgaacgggtcgagggtagcccgctagcccgcataac 34313880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 36240900 - 36240733
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| ||  ||||||||||||||||| | ||||||||||| ||| |||||||||||||| | ||||||||| |||||||||||||||| |    
T  36240900 tagagctgtcaaaatggatcgggccgtatggaccggtccgtttagcccgaataaatatagggtttgggcataaaatattgagcccgaattttaatagggc 36240801  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| ||| |||| ||||||||| || ||| |||||||||||||||||||||| |||||||||||    
T  36240800 tttttagcccgacccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgc 36240733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 120 - 298
Target Start/End: Original strand, 28222876 - 28223054
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||| ||||||| ||||||  |||||||||| ||| |||||||| ||||||| ||||| ||| |||||||||||||||| |    
T  28222876 tagagctgtcaaaacgggccgggtcgtatgggccggcctatttagcccgaataaatatagggtctgggcctaaaataatgagcccgaattttaatagggc 28222975  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcata 298  Q
    ||||||| ||||| || ||||||||| || ||| |||||||||||||||| ||||| |||||||||| ||| |||||||    
T  28222976 tttttagcccggctcttaaaagcccggtacccgttagggctagcccgaacaggccgcgggtagcccgttagtccgcata 28223054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 42799478 - 42799657
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||| ||  | ||||||||| ||| || |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||      
T  42799478 tagagctgtcaaaacaggttgtgccgtatgggccgacccgtttagaccgattaattatagggcttgggccttaaatattgagcccgaattttaatagg-t 42799576  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| || ||||||||||||||| || ||| |||| ||||||||||||||||| ||||||| || |||||||||||||    
T  42799577 tttttagcccagccctaaaaagcccggtacccgttaggactagcccgaacgggccgcgggtagctcgttagcccgcataac 42799657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 1346394 - 1346246
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||| ||| || ||    
T  1346394 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtaccc 1346295  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  1346294 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 1346246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 120 - 286
Target Start/End: Original strand, 29810679 - 29810845
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||| | || |||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||      
T  29810679 tagagctgtcaaaacgggctgagctgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggga 29810778  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccg 286  Q
    ||||||| |||||||| ||||||| | || ||| |||||||||| |||| |||||| ||||||||||    
T  29810779 tttttagcccggcccttaaaagcctggtacccgttagggctagcacgaatgggccgcgggtagcccg 29810845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 27258952 - 27258811
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||||| ||||||||||  || |||||||||||||||||| |||| ||||||||||| |||||||| ||| |||||||| ||||| ||| || |||||    
T  27258952 gtttagcctgattaattatcaggcttgggccttaaatattgagcccgtattttaatagggctttttagcccgaccctaaaatgcccggtattcgttaggg 27258853  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  27258852 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 27258811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 10261304 - 10261452
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| | | |||| ||||||||| || ||    
T  10261304 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcctgacccttaaaagcccggtaccc 10261403  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  10261404 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 10261452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 13311518 - 13311653
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||  |||||||||||| || |||||||  |||||||||||||||||| || ||    
T  13311518 ccggcctgtttagcccgattaattatagggcttgggctttaaatattgagtccgaattttaattgggctttttaacccggccctaaaaagcccggtaccc 13311617  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgc 287  Q
      |||||||||||||||||||||| |||||||||||    
T  13311618 attagggctagcccgaacgggccgcgggtagcccgc 13311653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 35439645 - 35439504
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||| |||||    
T  35439645 gtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 35439546  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||| || ||| |||||||||| |||||||||||||    
T  35439545 caagcccgaagggaccgcgggtagcccgttagcccgcataac 35439504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 45517158 - 45517306
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| ||||| || ||||||||| |||||||||||||||  |||||||| ||| |||  ||||||||| || ||    
T  45517158 ccggcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagagctttttagcccgacccataaaagcccggtaccc 45517257  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  45517258 gatagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 45517306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 19944947 - 19944766
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||||||| ||||| | || ||| || ||||||||||||||||||||||| ||| || ||||||||||| ||||| |||||| |||     
T  19944947 ctagagctgtcaaaacgggccaggccgcaggggccgacccgtttagcccgattaattatagggcttgtgctttaaatattgagcccgatttttaagaggg 19944848  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||| ||||||||| ||| ||     |||||||||||||||||||| | ||||||| || |||||| ||||||    
T  19944847 ctttttagcccggtcctaaaaagtccggtacaaattagggctagcccgaacgggctgcgggtagctcgttagcccacataac 19944766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 37209647 - 37209506
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||| ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||  ||||||  ||||||||||||| |  | ||| || |||||    
T  37209647 gtttaacccgattaattatagggcttgggcctgaaatattgagcccgaattttaatagggttttttaacccggccctaaaaatcaagatattcgttaggg 37209548  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||| ||||||||||||| |||||||||| |||||||||||||    
T  37209547 ctaacccgaacgggccgcgggtagcccgttagcccgcataac 37209506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 10440135 - 10440270
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| ||| |||| ||||||||| || |     
T  10440135 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagcccggtacct 10440234  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgc 287  Q
    | ||||||||||||||| |||||| |||||||||||    
T  10440235 gttagggctagcccgaatgggccgcgggtagcccgc 10440270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 120 - 266
Target Start/End: Complemental strand, 37209036 - 37208889
Alignment:
Q  120 tagagctgtcaaaa-cgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||| || |||||||||||||| |||||| |||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||||     
T  37209036 tagagctgtcaaaaacgagccgggccgtatgggccggcctgtttagcccgattaattatacgacttgggccttaaatattgaccccgaattttaataggg 37208937  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccg 266  Q
     ||||||  ||||||||||||| |||| || ||| | ||| |||||||    
T  37208936 ttttttatcccggccctaaaaaacccggtacccgtttgggttagcccg 37208889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 9439408 - 9439290
Alignment:
Q  122 gagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactt 221  Q
    ||||||||||||||||||||||| || || |||||| ||||||||| ||||||||||||  |||||||||||| ||||| |||||||||||||||| |||    
T  9439408 gagctgtcaaaacgggccgggccctacgggccggcccgtttagcccaattaattataggacttgggccttaaacattgagcccgaattttaatagggctt 9439309  T
Q  222 tttagtccggccctaaaaa 240  Q
    ||||| |||||| ||||||    
T  9439308 tttagcccggccttaaaaa 9439290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 266
Target Start/End: Complemental strand, 12017622 - 12017480
Alignment:
Q  123 agctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggacttt 222  Q
    ||||||||||||||| ||||| | |||||||| ||  |||||||||||||| |||| || ||| |||||||||||||| ||| |||||||| ||| ||||    
T  12017622 agctgtcaaaacgggtcgggc-gaatggaccgacccatttagcccgattaaatataaggcttgagccttaaatattgagcccaaattttaaaagggcttt 12017524  T
Q  223 ttagtccggccctaaaaagcccgctatccgatagggctagcccg 266  Q
    |||| ||| ||||||||||||||||| ||| |||||||||||||    
T  12017523 ttagcccgaccctaaaaagcccgctacccgttagggctagcccg 12017480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 13247723 - 13247858
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||| ||| || ||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||    
T  13247723 ccggcccgtttagcccgaataaatatggggcttaggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtaccc 13247822  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgc 287  Q
    | ||||||||||| ||| |||||| |||||||||||    
T  13247823 gttagggctagcctgaatgggccgcgggtagcccgc 13247858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 18258197 - 18258031
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||| ||||||||||| |||||  |||||| |||||| ||||||||||| ||| ||||||  |||||||| |||||||||  ||||||||||||||| |    
T  18258197 tagagttgtcaaaacgg-ccgggatgtatgggccggcccgtttagcccgaataaatataggacttgggcctaaaatattgagtccgaattttaatagggc 18258099  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||  |||||||| ||||||||| || ||| |||||||| | ||||||||||| | |||||||||    
T  18258098 tttttaccccggcccttaaaagcccggtacccgttagggctacctcgaacgggccgcgagtagcccgc 18258031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 30801322 - 30801174
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| || || | |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||    
T  30801322 ccggcccgtttagcccgaataaataaagagcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtaccc 30801223  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||||| ||||  ||||| |||||| | | |||||||||||||    
T  30801222 gttagggctagctcgaataggccgtgggtagtcagttagcccgcataac 30801174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 2650181 - 2650055
Alignment:
Q  175 tatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacggg-c 273  Q
    ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||| ||| ||||||||| || ||| ||||||||||||||| ||| |    
T  2650181 tatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgttagggctagcccgaatgggcc 2650082  T
Q  274 cgagggtagcccgctagcccgcataac 300  Q
    ||  ||||||||| |||||||||||||    
T  2650081 cgcaggtagcccgttagcccgcataac 2650055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 287
Target Start/End: Complemental strand, 30016339 - 30016205
Alignment:
Q  153 cggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccg 252  Q
    ||||| |||||| | || ||| ||||||| |||||||| ||||||| | |||||||||||||||| |||||||| || ||||| ||||||||| || ||     
T  30016339 cggcccgtttagtctgaataaatatagggcttgggcctaaaatattaagcccgaattttaatagggctttttagcccagcccttaaaagcccggtaccca 30016240  T
Q  253 atagggctagcccgaacgggccgagggtagcccgc 287  Q
     ||||| ||||||||| |||||| |||||||||||    
T  30016239 ttagggttagcccgaatgggccgcgggtagcccgc 30016205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 300
Target Start/End: Complemental strand, 38962343 - 38962213
Alignment:
Q  170 ttaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaac 269  Q
    |||| ||||||| ||| |||| ||||||||| ||||||||||||||||  |||| || ||||| || ||||| ||| || | | ||||||||||||||||    
T  38962343 ttaaatatagggcttgagcctaaaatattgagcccgaattttaatagggtttttcagcccggctcttaaaagtccggtacctgttagggctagcccgaac 38962244  T
Q  270 gggccgagggtagcccgctagcccgcataac 300  Q
    ||||| ||||||||||| || ||||||||||    
T  38962243 gggccaagggtagcccgttaacccgcataac 38962213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 300
Target Start/End: Complemental strand, 20932600 - 20932462
Alignment:
Q  153 cggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccg 252  Q
    ||||| ||||| ||||| ||| |||| || |||||||| ||||||||| ||||||||| |||||| |||||||| || ||||         || ||||||    
T  20932600 cggcccgtttaacccgaataaatataaggcttgggcctaaaatattgagcccgaatttgaatagggctttttagcccagccc---------cggtatccg 20932510  T
Q  253 atagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  20932509 ttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 20932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 20951761 - 20951705
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatag 216  Q
    |||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  20951761 tttaacccgattaattatagggtttgggtcttaaatattgagtccgaattttaatag 20951705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 15439232 - 15439275
Alignment:
Q  184 tgggccttaaatattgatcccgaattttaataggactttttagt 227  Q
    ||||||||||||||||| |||||||||||||| | |||||||||    
T  15439232 tgggccttaaatattgagcccgaattttaatatggctttttagt 15439275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 1714 - 1534
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| || |    
T  1714 tagagctgtcaaaacaggtcgggccgtatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaattgggc 1615  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  1614 tttttagcccggccctaaaaagcccgctacctgttagggctagcctgaacgggccgagggtagcccgctagcccgcataac 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 119 - 299
Target Start/End: Complemental strand, 29940248 - 29940068
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||     
T  29940248 ctagagctgtcaaaacgggtcgggtcgtatgggccggtccgtttagcccgattaattatagagattgggccttaaatattgagcccgaattttaataggg 29940149  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||||||| || |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  29940148 ctttttagcccagccctaaaaagcccgctacccgttagggctagcccgagcgggccgagggtagcccgctagcccgcataa 29940068  T

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Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 356409 - 356589
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| |||||||||||| |||||| ||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||||| |    
T  356409 tagagctgtcaaaacgggtcgggccgtatgggccggcccgtttaacccgattaaatatagggcttgggccttaaatattgaacccgaattttaatagggc 356508  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     |||||  ||  | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  356509 attttaaccctactctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 356589  T

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Target: chr8; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 120 - 299
Target Start/End: Complemental strand, 20823656 - 20823477
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |    
T  20823656 tagagctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccgattaattatagggcttgtgccttaaatattgagcccgaattttagtagggc 20823557  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    ||||||| ||| |||||||||||||| || ||| ||||| |||||||||||||||| |||||||||| ||||||||||||    
T  20823556 tttttagcccgaccctaaaaagcccggtacccgttagggttagcccgaacgggccgcgggtagcccgttagcccgcataa 20823477  T

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Target: chr8; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 119 - 300
Target Start/End: Original strand, 32018291 - 32018472
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||| ||||||||||||| |  |||||| |||||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||     
T  32018291 ctagagctctcaaaacgggccgtgttgtatgggccggcccgtttagcccgattaattatagggcttgagccttaaatattgatcccaaattttaataggg 32018390  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||| |||||||||| ||||| ||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  32018391 ctttttagcccggtcctaaaaagctcgctacccattagggctagcccgaacgggccaagggtagcccgctagcccgcataac 32018472  T

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Target: chr8; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 6266236 - 6266416
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  6266236 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 6266335  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  6266336 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 6266416  T

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Target: chr8; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 5927043 - 5927223
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| ||||||||  ||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  5927043 tagagctgtcaaaacgggccggcccgtatgggtcggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 5927142  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  5927143 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 5927223  T

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Target: chr8; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 40027706 - 40027534
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| |||||||||||| | |||| ||||| ||||||||||||||||| |||| ||||||||||||| || ||||||||||||| |    
T  40027706 tagagctgtcaaaacgggtcgggccgtatgggctggcccgtttaacccgattaattatagggcttggaccttaaatattgaacctgaattttaatagggc 40027607  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcc 292  Q
    ||||||| |||||||||||||||||| || ||| ||||||||| ||||||||||||||| |||||||||||||    
T  40027606 tttttagcccggccctaaaaagcccggtacccgttagggctagtccgaacgggccgaggttagcccgctagcc 40027534  T

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Target: chr8; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 24101901 - 24101721
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||| |||| |||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  24101901 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttcgcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 24101802  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| | |||||||| |||||||||||||    
T  24101801 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaaagggccgcgagtagcccgttagcccgcataac 24101721  T

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Target: chr8; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 38231880 - 38231701
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||| |||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  38231880 tagagctgtcaaaacgggccggcccgtatgggccggccg-tttagtccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 38231782  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||| | |||||||||| |||||||||||||    
T  38231781 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggctgtgggtagcccgttagcccgcataac 38231701  T

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Target: chr8; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 31895087 - 31894921
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| || || ||||||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  31895087 tagagctgtcaaaacgggccggcccatacggaccggcccgtttagcccgaataaatatagggcttgggcct-aaatattgagcccgaattttaatagggc 31894989  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||||||| ||||||||| || ||| |||||||| |||||| |||||| |||||||||||    
T  31894988 tttttagcccggcccttaaaagcccggtacccgttagggctaacccgaatgggccgcgggtagcccgc 31894921  T

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Target: chr8; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 38894680 - 38894819
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||| |||| ||||||||||||| |||||||||||||||| |    
T  38894680 tagagctgtcaaaacgggccgggccgtatgggccggctcgtttagcccgattaaatatagggcttggaccttaaatattgagcccgaattttaatagggc 38894779  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    ||||||| ||| ||||||||||||||||| ||| ||||||    
T  38894780 tttttagcccgaccctaaaaagcccgctacccgttagggc 38894819  T

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Target: chr8; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 11202296 - 11202155
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||| |||||    
T  11202296 gtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 11202197  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||| |||||| |||||||||| |||||||||||||    
T  11202196 ctagcccgaatgggccgcgggtagcccgttagcccgcataac 11202155  T

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Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 41395776 - 41395943
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  41395776 tagagctgtcaaaacgggccggaccgtatgggccggcacgtgtagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 41395875  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| ||| |||| ||||| ||| || ||| ||||||||||||||| |||||| |||||||||||    
T  41395876 tttttagcccgacccttaaaagtccggtacccgttagggctagcccgaatgggccgcgggtagcccgc 41395943  T

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Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 120 - 266
Target Start/End: Original strand, 5913259 - 5913405
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||| |||||| |||||||| ||| || ||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||| |    
T  5913259 tagagctgtcaaaacaggccggtccgtatgggccgacccgtttagcccgattaattatagggcttgggccttcaatattgagcctgaattttaatagggc 5913358  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccg 266  Q
    |||||||  ||||||||||||||||| || ||| |||||||||||||    
T  5913359 tttttagctcggccctaaaaagcccgatacccgttagggctagcccg 5913405  T

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Target: chr8; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 26098270 - 26098418
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||    
T  26098270 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtaccc 26098369  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||  |||||||||||||    
T  26098370 gttagggctagcccgaatgggccgcgggtagcccattagcccgcataac 26098418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 41827675 - 41827527
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||    
T  41827675 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtaccc 41827576  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | || |||||||||||| |||||| |||||||||| |||||||||||||    
T  41827575 gttaaggctagcccgaatgggccgcgggtagcccgttagcccgcataac 41827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 120 - 299
Target Start/End: Complemental strand, 42935930 - 42935752
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||| |||| ||||||||| | ||| ||||| ||||| ||| ||||||| |||||||| ||||||||| || |||||||||||||      
T  42935930 tagagctgtcaaaacggaccggcccgtatggatcagcccgtttaacccgaataaatatagggcttgggcctaaaatattgagcctgaattttaatagg-t 42935832  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    ||||||| |||||||| ||||| ||| || ||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  42935831 tttttagcccggcccttaaaagtccggtacccgttagggctagcccgaatgggccgtgggtagcccgttagcccgcataa 42935752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 32925501 - 32925395
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  32925501 tagagctgtcaaaacgggtcgggccttatggaccggcccgtttagctcgattaattatagggtttgggccttaaatattgagctcgaattttaataggac 32925402  T
Q  220 tttttag 226  Q
    |||||||    
T  32925401 tttttag 32925395  T

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Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 37819215 - 37819356
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| || ||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||| |||||    
T  37819215 gtttagcccgaataaatatagggcttcggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 37819314  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||| |||||| |||||||||| |||||||||||||    
T  37819315 ctagcccgaatgggccgggggtagcccgttagcccgcataac 37819356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 40027736 - 40027889
Alignment:
Q  147 atggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgc 246  Q
    |||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||     
T  40027736 atgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 40027835  T
Q  247 tatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || ||| |||||||||| |||| || ||| |||||||||| |||||||||||||    
T  40027836 tacccgttagggctagctcgaatggaccgcgggtagcccgttagcccgcataac 40027889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 120 - 299
Target Start/End: Original strand, 7764302 - 7764481
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||  || |||||| ||||| |||  | ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| |    
T  7764302 tagagctgtcaaaattggtcgggccatatgggccgaaccgtttagcccgattaattatagggtttgagccttaaatattgagcccaaattttaatagggc 7764401  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    ||||||| | ||||||||||||  |  |||||| ||||||||| | ||||||| || |||||||||| ||||| ||||||    
T  7764402 tttttagcctggccctaaaaagttcagtatccgttagggctagtctgaacgggacgcgggtagcccgttagcctgcataa 7764481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 300
Target Start/End: Original strand, 15041325 - 15041480
Alignment:
Q  145 gtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagccc 244  Q
    |||||| |||||| ||||| ||||| ||| ||||||| |||||||| | ||||||| |||||||||||||||| |||||||| |||||||| ||||||||    
T  15041325 gtatgggccggcccgtttaacccgaataaatatagggcttgggcctaagatattgagcccgaattttaatagggctttttagcccggcccttaaaagccc 15041424  T
Q  245 gctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | || ||| ||||||||||||||| |||||| || ||||||| |||||||||||||    
T  15041425 gatacccgttagggctagcccgaatgggccgcggatagcccgttagcccgcataac 15041480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 300
Target Start/End: Original strand, 21412434 - 21412589
Alignment:
Q  145 gtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagccc 244  Q
    |||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||| | ||||||||    
T  21412434 gtatgggccggcctgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggccatcaaaagccc 21412533  T
Q  245 gctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | || ||| |||||||| | |||| |||||| |||||||||| |||||||||||||    
T  21412534 ggtacccgttagggctaactcgaatgggccgcgggtagcccgttagcccgcataac 21412589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 300
Target Start/End: Original strand, 21806926 - 21807081
Alignment:
Q  145 gtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagccc 244  Q
    |||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||| | ||||||||    
T  21806926 gtatgggccggcctgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggccatcaaaagccc 21807025  T
Q  245 gctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | || ||| |||||||| | |||| |||||| |||||||||| |||||||||||||    
T  21807026 ggtacccgttagggctaactcgaatgggccgcgggtagcccgttagcccgcataac 21807081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 299
Target Start/End: Complemental strand, 27640132 - 27639993
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||||||| ||| ||||||| |||||||| ||||||||| |||||| ||||||||| |||||||| |||||||| ||||||||| |||||| ||||||    
T  27640132 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaaatttaatagggctttttagcccggcccttaaaagcccggtatccgttagggc 27640033  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||||||||  ||||| |||||||||| ||||||||||||    
T  27640032 tagcccgaataggccgcgggtagcccgttagcccgcataa 27639993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 14615691 - 14615550
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| || |||||||||||||| ||||||| |||||| | ||||||||| || ||| |||||    
T  14615691 gtttagcccgaataaatatagggtttgggcctaaaatattgagcctgaattttaataggattttttagcccggcctttaaaagcccggtacccgttaggg 14615592  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||| |||||| |||||||||| |||| ||||||||    
T  14615591 ctagcccgaatgggccgcgggtagcccgttagctcgcataac 14615550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 7161575 - 7161715
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| ||| |||| ||||||||| || ||| ||||||    
T  7161575 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgtcccttaaaagcccggtacccgttagggc 7161674  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||| |||||| |||||| ||| |||||||||||||    
T  7161675 tagcccgaatgggccgcgggtagtccgttagcccgcataac 7161715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 24476504 - 24476356
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||| || |||||||| |||||||| ||| ||||| || ||    
T  24476504 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaattgggctttttagcccggcccttaaatgcccggtaccc 24476405  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| ||||||  ||||||||| |||||||||||||    
T  24476404 gttagggctagcccgaatgggccgcaggtagcccgttagcccgcataac 24476356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 41644298 - 41644150
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| |||||| |||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||    
T  41644298 ccggcccgtttagtccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggcctttttagcccggcccttaaaagcccggtaccc 41644199  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||| |||||| |||| | |||||||||| |||||||||||||    
T  41644198 gttagggctaacccgaatgggctgcgggtagcccgttagcccgcataac 41644150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 28994756 - 28994905
Alignment:
Q  149 ggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgcta 248  Q
    ||||||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| | |||||| |||||||| |||| |||| ||    
T  28994756 ggaccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc-ttttagcccggcccttaaaa-cccggta 28994853  T
Q  249 tccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  28994854 cccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 28994905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 7433414 - 7433554
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||  | ||| ||||||    
T  7433414 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgttagggc 7433513  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||| |||| |||| | ||||||| || |||||||||||||    
T  7433514 tagctcgaatgggctgcgggtagctcgttagcccgcataac 7433554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 22487437 - 22487330
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||| || ||| |||||    
T  22487437 gtttagccagattaattatagggcttggaccttaaatattgagcccgaattttaatagggttttttagtctggccctaaaaagcccgatacccgttaggg 22487338  T
Q  259 ctagcccg 266  Q
     |||||||    
T  22487337 ttagcccg 22487330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 34347114 - 34347019
Alignment:
Q  163 agcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||| || ||| |||||    
T  34347114 agcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttaggg 34347019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 149 - 287
Target Start/End: Complemental strand, 37255706 - 37255568
Alignment:
Q  149 ggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgcta 248  Q
    ||||||| | ||||||||||| ||| ||||||| ||| |||| ||||||||| |||||||||||||||  |||||||| | ||| || ||||||||| ||    
T  37255706 ggaccggtccgtttagcccgaataaatatagggcttgagcctaaaatattgagcccgaattttaatagagctttttagcctggctcttaaaagcccggta 37255607  T
Q  249 tccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
     ||| ||||||||||||||| |||||| |||||||||||    
T  37255606 cccgttagggctagcccgaatgggccgcgggtagcccgc 37255568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 957508 - 957593
Alignment:
Q  202 cccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||| ||||||||||||| |||||||||||||    
T  957508 cccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggccagcccgaacgggctgagggtagcccgc 957593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 44679277 - 44679145
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| || |||||||| ||| ||||||  |||||||| ||||||||| |||||||||||||||| |||||||| |||| ||| ||||||||| || ||    
T  44679277 ccggcccgtatagcccgaataaatataggacttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagcccggtaccc 44679178  T
Q  252 gatagggctagcccgaacgggccgagggtagcc 284  Q
    | ||||||||||| ||| |||||| ||||||||    
T  44679177 gttagggctagcctgaatgggccgcgggtagcc 44679145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 30874246 - 30874177
Alignment:
Q  231 gccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  30874246 gccctaaaaagcccgctacccgttagagctagcccgaacgggccgagggtagcccgctagcccgcataac 30874177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 23192839 - 23193019
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| ||||  | ||||||||||||||  ||| |||||||||||||||||| |||| | ||||||||||||  ||||||||| ||| |      
T  23192839 tagagctgtcaaaaggggcaagcccgtatggaccggcacgttaagcccgattaattataggttttgagacttaaatattgagaccgaatttttataagga 23192938  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||  ||| |||||||||||||| |  | | | ||||||||||| | |||||| |||||||| |  ||||||||||||    
T  23192939 tttttaacccgaccctaaaaagcccggtgccagtttgggctagcccgtatgggccgcgggtagcctgtgagcccgcataac 23193019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 43067084 - 43067192
Alignment:
Q  179 gggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagg 278  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||||| ||| |||||||||  ||| || ||| ||| |||||||||||||||||| ||    
T  43067084 gggtttgggtcttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaaatccggtacccgttagagctagcccgaacgggccgcgg 43067183  T
Q  279 gtagcccgc 287  Q
    |||| ||||    
T  43067184 gtagtccgc 43067192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 5924658 - 5924586
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccgg 231  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||  ||||||||||||    
T  5924658 gtttagcccgaataaatatagggtttgggcctaaaatattgaacccgaattttaatagggatttttagtccgg 5924586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 18654495 - 18654541
Alignment:
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  18654495 tagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 18654541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 30874288 - 30874247
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattga 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  30874288 gtttagcccgattaattatagggcttgggccttaaatattga 30874247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 957466 - 957512
Alignment:
Q  123 agctgtcaaaacgggccgggccgtatggaccggccggtttagcccga 169  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||    
T  957466 agctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccga 957512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 20983891 - 20983843
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattga 200  Q
    |||||| ||||||||||| ||| ||||||| |||||||| |||||||||    
T  20983891 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattga 20983843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 32555642 - 32555822
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| |||||||||||| || ||| ||||||||||||||||||||||  |||||||||||||||||| | |||||||||||||| |    
T  32555642 tagagctgtcaaaacgggtcgggccgtatgggccagcccgtttagcccgattaattataggtcttgggccttaaatattgagctcgaattttaatagggc 32555741  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || |||| |||| |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  32555742 ttcttagcccggtcctaaaaagcccgctacccgttagggctagtccgaacgggccgagggtagcccgctagcccgcataac 32555822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 44871639 - 44871486
Alignment:
Q  147 atggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgc 246  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||||||||||| ||    
T  44871639 atggatcggcccgtttagcccgattaattatagggtttgggtcttaaatattgagctcgaattttaatagggctttttagcccggccctaaaaagcctgc 44871540  T
Q  247 tatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44871539 tacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 44871486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 56264559 - 56264379
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  56264559 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 56264460  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  56264459 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 56264379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 145 - 300
Target Start/End: Original strand, 16623451 - 16623606
Alignment:
Q  145 gtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagccc 244  Q
    |||||| | |||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  16623451 gtatgggctggcccgtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagccc 16623550  T
Q  245 gctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  16623551 gctacccgttagggctagcccgaacgggccgagagtagcccgctagcccgcataac 16623606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 154 - 299
Target Start/End: Complemental strand, 41883261 - 41883116
Alignment:
Q  154 ggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccga 253  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||| |||| ||||||||||||||||||||     
T  41883261 ggcccgtttagcccgattaattatagggtttgggccttaaatattgagctcgaattttaatagggctttttagcccggacctaaaaagcccgctatccgt 41883162  T
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||    
T  41883161 tagggccagcccgaacgggccgagggtagcacgctagcccgcataa 41883116  T

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Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 52278955 - 52278776
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| ||||||||||||  ||||| |||||||||||||||||| |||| |||||||||||||||||| | |||||||||||||| |    
T  52278955 tagagctgtcaaaacgggtcgggccgtatgggtcggcccgtttagcccgattaattacagggcttgggccttaaatattgagctcgaattttaatagggc 52278856  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||  ||| ||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  52278855 ttcatagcccgaccctaaaaagcccgctacccgttagggctagcccgaa-gggccaagggtagcccgctagcccgcataac 52278776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 19823799 - 19823619
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||||| ||| ||||||| ||||| || ||||||||| | |||||||||||||| |    
T  19823799 tagagctgtcaaaacgggccgggccgaatgggccggcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcacgaattttaatagggc 19823700  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| |||||||||||||||||||||| ||||| |||| |||||||||||||    
T  19823699 tttttagaccggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtaacccgttagcccgcataac 19823619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 41831169 - 41831349
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||| ||||||||||||||| |||||||||  ||||| ||||| ||||||||| |||| |||||||  |||||||||||| ||||||| ||||||||||    
T  41831169 tagagttgtcaaaacgggccgagccgtatgggtcggcccgtttatcccgattaaatataaggtttggatcttaaatattgaacccgaatattaataggac 41831268  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||| ||||| |||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  41831269 tttttaatccggtcctaaaaagcccgctacccgttagggctagcccgaacgggtcgagggtaacccgctaacccgcataac 41831349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 117 - 300
Target Start/End: Complemental strand, 56114352 - 56114169
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatag 216  Q
    ||||| |||||||||||||||||||||||||  ||||   | ||||||||||||||||||||||| |||||||||||||||||| ||  |||||||||||    
T  56114352 aactatagctgtcaaaacgggccgggccgtacagacctatccgtttagcccgattaattatagggcttgggccttaaatattgagcctaaattttaatag 56114253  T
Q  217 gactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||| |||| ||||||||||||| || ||| |||||||||||||||||||||  |||||||||| |||||||||||||    
T  56114252 ggctttttagcccggtcctaaaaagcccggtacccgttagggctagcccgaacgggccacgggtagcccgttagcccgcataac 56114169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 120 - 299
Target Start/End: Complemental strand, 401513 - 401334
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||  |||||| |||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  401513 tagagctgtcaaaataggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 401414  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    |||||||  ||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  401413 tttttagctcggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 401334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 120 - 299
Target Start/End: Original strand, 53925306 - 53925485
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||| ||||||||||||||||||||||| |||| | |||||||||||  || ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  53925306 tagagctatcaaaacgggccgggccgtatgggccggtccgtttagcccgaaaaaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 53925405  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    ||||||| |||||||| ||||  ||| || ||| |||||||||||||||||||||  |||||||||| ||||||||||||    
T  53925406 tttttagcccggcccttaaaaatccggtacccgttagggctagcccgaacgggccatgggtagcccgttagcccgcataa 53925485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 116 - 300
Target Start/End: Complemental strand, 6643453 - 6643269
Alignment:
Q  116 caactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaata 215  Q
    ||||||||| |||||||| |||||||  ||||||| |||| | ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6643453 caactagagttgtcaaaatgggccggttcgtatgggccggtccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaata 6643354  T
Q  216 ggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||  ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| |||||  ||| |||||||||||||    
T  6643353 gggttttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtattccgttagcccgcataac 6643269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 35392744 - 35392892
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||  |||||||| ||||||||| || ||    
T  35392744 ccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaataggactttttaacccggcccttaaaagcccggtaccc 35392843  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  35392844 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 35392892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 40731357 - 40731190
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| ||| || ||||||||||| ||| ||||||| |||||||| ||||||||| |||| ||||||||||| |    
T  40731357 tagagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccggattttaatagggc 40731258  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||| ||||| |||||| |||||||||||    
T  40731257 tttttagcccggcccttaaaagcccgttacccgttagggctagtccgaatgggccgcgggtagcccgc 40731190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 119 - 248
Target Start/End: Original strand, 6366322 - 6366451
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||| | ||||||| |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  6366322 ctagagctgtcaaaatgagccgggctgtatgggccggcccgtttaacccgattaattatagggtttgggccttaaatattgagcccgaattttaataggg 6366421  T
Q  219 ctttttagtccggccctaaaaagcccgcta 248  Q
    |||||||| | |||||||||||||||||||    
T  6366422 ctttttagcctggccctaaaaagcccgcta 6366451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 19521919 - 19521739
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||| ||| |||||||  |||||| |||||| |||| ||| |||||||||||||||| ||||||||| ||||||||||||| || |    
T  19521919 tagagctgtcaaaacgggtcggtccgtatgagccggcccgtttagtccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatggggc 19521820  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| || | ||| ||||||||| || ||| ||||||||||||||| |||||| ||||| |||| |||||||||||||    
T  19521819 tttttagcccagtccttaaaagcccgatacccgttagggctagcccgaatgggccgcgggtaacccgttagcccgcataac 19521739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 117 - 300
Target Start/End: Original strand, 53724824 - 53725007
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatag 216  Q
    ||||||||||||||||||||| ||  | |||||| ||| || ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||    
T  53724824 aactagagctgtcaaaacgggtcgacctgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatag 53724923  T
Q  217 gactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||| |||||||| ||||||||  || ||  ||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  53724924 ggctttttagcccggcccttaaaagcccagtacccattagggctagcccgaatgggccgcgggtagcccgtgagcccgcataac 53725007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 41140608 - 41140749
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||  || ||| |||||    
T  41140608 gtttagcccgattaattataaggcttgagccttaaatattgagcccgaattttaatagggctttttaacccggccctaaaaagccccgtacccgttaggg 41140707  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||||| |||||||||| | |||||||||||    
T  41140708 ctagcccgaacgggccgcgggtagcccgttcgcccgcataac 41140749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 30000211 - 30000392
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    |||||||||||||||||||||||| || || || | |||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||| ||||||||||||    
T  30000211 actagagctgtcaaaacgggccggcccatacgggc-ggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccaaattttaatagg 30000309  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     |||||||| || ||||| ||||||| | || ||| ||||||||||||||| ||||||  ||||||||| |||||||||||||    
T  30000310 cctttttagcccagcccttaaaagcctggtacccgttagggctagcccgaatgggccgctggtagcccgttagcccgcataac 30000392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 15194482 - 15194623
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||| ||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||| |||||    
T  15194482 gtttagctcgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 15194581  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||| |||||| |||||||||| |||||||||||||    
T  15194582 ctagcccgaatgggccgcgggtagcccgttagcccgcataac 15194623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 39809735 - 39809594
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||| ||| ||||||| ||| |||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| |||||| ||| |    
T  39809735 gtttagcccgaataaatatagggcttgagcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtatccgttagag 39809636  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||| |||||| |||||||||| |||||||||||||    
T  39809635 ctagcccgaatgggccgcgggtagcccgttagcccgcataac 39809594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 51435703 - 51435550
Alignment:
Q  147 atggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgc 246  Q
    |||| |||||| ||||||||||| ||| ||||| | |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||     
T  51435703 atgggccggcccgtttagcccgaataaatatagagcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 51435604  T
Q  247 tatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || ||| || |||||||||||| |||||| |||||||||| |||||||||||||    
T  51435603 tacccgttaaggctagcccgaatgggccgcgggtagcccgttagcccgcataac 51435550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 26707031 - 26706883
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||| | |||||||| |||||||| ||||||||| || ||    
T  26707031 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatatggctttttagcccggcccttaaaagcccggtaccc 26706932  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| ||| |||||||||    
T  26706931 gttagggctagcccgaatgggccgcgggtagcccgttagtccgcataac 26706883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 126 - 287
Target Start/End: Complemental strand, 1139138 - 1138977
Alignment:
Q  126 tgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggacttttta 225  Q
    |||||||||||||||| |||||||| |||||| ||||||||||| ||| |||||||  ||||||| ||||||||| ||| |||||||||||| |||||||    
T  1139138 tgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcctgggcctaaaatattgagcccaaattttaatagggcttttta 1139039  T
Q  226 gtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    | |||||||| |||||| || || ||| |||||| ||| |||| |||||| |||||||||||    
T  1139038 gcccggcccttaaaagctcggtacccgttagggccagctcgaatgggccgcgggtagcccgc 1138977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 120 - 297
Target Start/End: Complemental strand, 19474842 - 19474665
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||| ||||| |||||||   ||||  || ||| ||||| ||||||||||||||||| |||||||||||||||||| | |||||||||||||| |    
T  19474842 tagagctgttaaaacaggccgggttttatgagccagcccgtttaacccgattaattatagggcttgggccttaaatattgagctcgaattttaatagggc 19474743  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcat 297  Q
    ||||||| |||||||||||||||||| || ||  ||||||||  |||||||||||| |||||||| | ||||| ||||    
T  19474742 tttttagcccggccctaaaaagcccggtacccattagggctaatccgaacgggccgcgggtagcctgttagccagcat 19474665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 287
Target Start/End: Complemental strand, 31616662 - 31616493
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    ||||||| |||||||||| | |||||||||||||||||||  ||||||||||| |||||||||  |||||| ||||||||||| || |||||||||||||    
T  31616662 actagagttgtcaaaacgtgtcgggccgtatggaccggcctatttagcccgatcaattataggacttgggctttaaatattgagcctgaattttaatagg 31616563  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    |||||||   |||  ||||||||||||| ||  || ||||| ||||| |||||||||| |||||||||||    
T  31616562 actttttgacccgatcctaaaaagcccggtactcgttagggttagcctgaacgggccgcgggtagcccgc 31616493  T

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Target: chr4; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 24678240 - 24678416
Alignment:
Q  124 gctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttt 223  Q
    |||||||||||||| |||  |||||||  ||||| ||||||||||| ||| ||||| | ||| |||| ||||||||| | ||||||||||||||  ||||    
T  24678240 gctgtcaaaacgggtcggctcgtatgggtcggcccgtttagcccgaataaatatagagcttgagcctaaaatattgagctcgaattttaatagggttttt 24678339  T
Q  224 tagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||| |||||||| ||||||||| || ||| ||||||||||||||| | |||| |||||||||| |||||||||||||    
T  24678340 tagcccggcccttaaaagcccggtacccgttagggctagcccgaatgagccgcgggtagcccgttagcccgcataac 24678416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 39240540 - 39240400
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||||||| ||| ||||||| || ||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||| ||| ||    
T  39240540 tttagcccgaataaatatagggcttaggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagagc 39240441  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  39240440 tagcccgaatgggccgcgggtagcccgttagcccgcataac 39240400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 50097391 - 50097539
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| |||||||||||||||| |||||||||  ||||||||||| ||| |||||||| |||||||| ||||| | | || ||    
T  50097391 ccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagtccgaattttaaaagggctttttagcccggcccttaaaagtctggtaccc 50097490  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  50097491 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 50097539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 287
Target Start/End: Original strand, 35013807 - 35013934
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||| |||||||||||||| |  |||||||||||||||||| |||||||||||||| |||||||||  ||||| |||||||||  |||| ||| ||||||    
T  35013807 tttaacccgattaattataagacttgggccttaaatattgaacccgaattttaatatgactttttaacccggctctaaaaagctagctacccgttagggc 35013906  T
Q  260 tagcccgaacgggccgagggtagcccgc 287  Q
    ||||||||||||||||||||||||||||    
T  35013907 tagcccgaacgggccgagggtagcccgc 35013934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 35666579 - 35666714
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||  |||||||| ||||||||| || ||    
T  35666579 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttaccccggcccttaaaagcccggtaccc 35666678  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgc 287  Q
    | ||||||||||||||| |||||| |||||||||||    
T  35666679 gttagggctagcccgaatgggccgcgggtagcccgc 35666714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 18861753 - 18861622
Alignment:
Q  154 ggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccga 253  Q
    |||| ||||||||||| ||| |||  ||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||| || |||     
T  18861753 ggcccgtttagcccgaataaatat--ggtttgggcctaaaatattgagcccgaattttaatagggctttttagttcggcccttaaaagcccgatacccgt 18861656  T
Q  254 tagggctagcccgaacgggccgagggtagcccgc 287  Q
    |||||||||||||||||||||| |||||||||||    
T  18861655 tagggctagcccgaacgggccgcgggtagcccgc 18861622  T

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Target: chr4; HSP #33
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 56519971 - 56520111
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||| || ||| |||||    
T  56519971 gtttagcccgattaattatagggcttggtccttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttaggg 56520070  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     |||||| ||||||| |  ||||||||| ||||| |||||||    
T  56520071 atagcccaaacgggctg-cggtagcccgttagcctgcataac 56520111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 34435890 - 34436037
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||| ||| |||||||| ||||||||| ||||||||||||| || ||||||||||||||||| ||||||||| || |     
T  34435890 ccggcccgtttagcccgaataaatat-gggcttgggcctaaaatattgagcccgaattttaatggggctttttagtccggcccttaaaagcccggtacct 34435988  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||| | |||||||||||||    
T  34435989 gttagggctagcccgaatgggccgcgggtagcctgttagcccgcataac 34436037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 54094110 - 54093962
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||| ||||| ||| ||||||| |||||| | ||||||||| |||||||||||||||| |||||||| |||||||| ||||| ||| || ||    
T  54094110 ccggcccgtttaacccgaataaatatagggcttgggcttaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtaccc 54094011  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||| | |||||||||| |||||||||||||    
T  54094010 gttagggctagcccgaatgggctgcgggtagcccgttagcccgcataac 54093962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 16347020 - 16346925
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaata 215  Q
    ||||||||||||||||||| ||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16347020 tagagctgtcaaaacgggctgggacgtatgggccggcctgtttagcctgattaattatagggtttgggccttaaatattgagcccgaattttaata 16346925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 33493229 - 33493101
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||| ||||||||||||||||||| ||||||||||||||| | | |||||||||||  |||||||| |||||||||||||| ||| || ||| |||||    
T  33493229 gtttagtccgattaattatagggttttggccttaaatattgagctcaaattttaatagagctttttagcccggccctaaaaagtccggtacccgttaggg 33493130  T
Q  259 ctagcccgaacgggccgagggtagcccgc 287  Q
    |||| |||||||||||| ||||| |||||    
T  33493129 ctagtccgaacgggccgtgggtaacccgc 33493101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 48152682 - 48152793
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| ||| |||| ||| || ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||      
T  48152682 tagagctgtcaaaacgggccggcccggatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggt 48152781  T
Q  220 tttttagtccgg 231  Q
    ||||||| ||||    
T  48152782 tttttagcccgg 48152793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 49480744 - 49480861
Alignment:
Q  183 ttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtag 282  Q
    |||||| | ||||||||| ||| |||||||||||| ||||||||||||||||| |||||| || || |  ||||||||||| ||||||||||| ||||||    
T  49480744 ttgggcataaaatattgagcccaaattttaatagggctttttagtccggcccttaaaagctcgatacctaatagggctagctcgaacgggccgcgggtag 49480843  T
Q  283 cccgctagcccgcataac 300  Q
    |||| ||| |||||||||    
T  49480844 cccgttagtccgcataac 49480861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 48500461 - 48500381
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattga 200  Q
    ||||||||||||||| ||||||||| ||||| | |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  48500461 tagagctgtcaaaacaggccgggccatatgggctggcccgtttagcccgattaattatagggcttgggccttaaatattga 48500381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 13563510 - 13563374
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||            ||||||| ||||||||| || ||    
T  13563510 ccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatag------------cggcccttaaaagcccggtaccc 13563423  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  13563422 gttagggctagcccgaatgggccgcgggtagtccgttagcccgcataac 13563374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 24534741 - 24534635
Alignment:
Q  193 aatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcc 292  Q
    |||||||| ||||||||||||||| | ||||||| |||||| ||||||||||||||  |  ||||||||||||||||||||||||||||||| ||||||     
T  24534741 aatattgagcccgaattttaatag-agtttttagcccggccttaaaaagcccgctactcattagggctagcccgaacgggccgagggtagcctgctagca 24534643  T
Q  293 cgcataac 300  Q
     |||||||    
T  24534642 tgcataac 24534635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 40227015 - 40226904
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||| ||||||||||| | |||||||| || ||| || |||||||| |||||||||||||||||||||||||||||||||   |||||||||||||  |    
T  40227015 tagagatgtcaaaacggactgggccgtacgggccgacccgtttagcctgattaattatagggtttgggccttaaatattgaggtcgaattttaatagagc 40226916  T
Q  220 tttttagtccgg 231  Q
    ||||||| ||||    
T  40226915 tttttagcccgg 40226904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 42587493 - 42587326
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| ||  |||||||||||  |||| | ||||   ||||||| ||||||||| || |||||||||||||| || ||||||||||||||     
T  42587493 tagagctgtcaaaatggatcgggccgtatgagccggaccgtttgatccgattagttatagggtctgagccttaaatattgagcctgaattttaataggat 42587394  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    |||||||  ||||| ||||||||||   | ||  |||||||||| |||||| |||| |||||||||||    
T  42587393 tttttagctcggccttaaaaagcccaacacccattagggctagctcgaacgagccgcgggtagcccgc 42587326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 159 - 297
Target Start/End: Original strand, 45849300 - 45849438
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||||||| ||| |||||||||   || || ||| |||||    
T  45849300 gtttaacccgattaattatagggcttgggccttaaatattgaacccgaattttaatagg-ttttttagcccgaccctaaaaaattcggtacccgttaggg 45849398  T
Q  259 ctagcccgaacgggcc-gagggtagcccgctagcccgcat 297  Q
    |||||| ||| |||||   |||||||||| ||||||||||    
T  45849399 ctagcctgaatgggccacggggtagcccgttagcccgcat 45849438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 20671978 - 20671898
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattga 200  Q
    |||||||||||||| || ||||||||||||| ||| || |||||||||||||||||||||||||  |||||||||||||||    
T  20671978 tagagctgtcaaaaaggaccgggccgtatgggccgacccgtttagcccgattaattatagggttcaggccttaaatattga 20671898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 51031641 - 51031728
Alignment:
Q  147 atggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccc 234  Q
    |||| ||||||  |||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  51031641 atgggccggcccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggactttttagcccggccc 51031728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 36694226 - 36694112
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||   ||||||| ||||||||| ||||||||||||||||  ||||||| ||| |||| ||||||||| || ||    
T  36694226 ccggcccgtttagcccgaataaatataggacatgggcctaaaatattgagcccgaattttaatagggttttttagcccgacccttaaaagcccggtaccc 36694127  T
Q  252 gatagggctagcccg 266  Q
    | |||||||||||||    
T  36694126 gttagggctagcccg 36694112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 48500377 - 48500306
Alignment:
Q  229 cggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||||||| | | ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  48500377 cggcccttaaaagcccgctacctgttagggctagcccgaacgggccgaggatagcccgctagcccacataac 48500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 42248065 - 42248137
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccgg 231  Q
    |||||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||  ||||||| ||||    
T  42248065 gtttagcccgattaattatagggtttggaccttaaatattcagcccgaatttttatagggatttttagaccgg 42248137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 54555694 - 54555555
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||| |||||||||||||| ||||||| ||||||||| | |   |||||||||||| |||||||||  |   ||||||||| ||||  ||||| ||||||    
T  54555694 tttaacccgattaattataaggtttggaccttaaataataagttcgaattttaatatgactttttaaccataccctaaaaaacccggaatccgttagggc 54555595  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||| | |||||||||| |||||| ||| || ||||||||||    
T  54555594 tagtctgaacgggccgcgggtagtccgtta-cccgcataac 54555555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 36075913 - 36075876
Alignment:
Q  163 agcccgattaattatagggtttgggccttaaatattga 200  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36075913 agcccgattaattatagggtttgggccttaaatattga 36075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 8907211 - 8907110
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaata---ttgatcccgaattttaat 214  Q
    ||||||| ||||||||| ||||||| |||| || ||||||  |||| |||||||||| |||||| ||| ||||||||||   |||| |||||||||||||    
T  8907211 actagagttgtcaaaacaggccgggtcgtacgggccggcccatttaacccgattaat-atagggcttgcgccttaaataatattgagcccgaattttaat 8907113  T
Q  215 agg 217  Q
    |||    
T  8907112 agg 8907110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 4709249 - 4709327
Alignment:
Q  153 cggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccgg 231  Q
    ||||| ||||| ||||| ||| |||| |||||| | || ||||||||| |||||||||||||||| |||||||| ||||    
T  4709249 cggcccgtttaccccgaataaatataaggtttgcgtctaaaatattgagcccgaattttaatagggctttttagcccgg 4709327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 16346901 - 16346855
Alignment:
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||||    
T  16346901 tagggctagcccgaacgggccgcgggttgcccgatagcccgcataac 16346855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 48152797 - 48152847
Alignment:
Q  250 ccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  48152797 ccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 48152847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 4709321 - 4709381
Alignment:
Q  240 agcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||| || ||| ||||||||||||||| |||| | |||||||||| |||||||||||||    
T  4709321 agcccggtacccgttagggctagcccgaatgggctgcgggtagcccgttagcccgcataac 4709381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 12030070 - 12030190
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||| |||||||||||||    ||||||||  ||||| ||  ||||||||||||| ||||| |||| | ||||||||||| ||| |||| | ||||| |    
T  12030070 tagagttgtcaaaacgggctaacccgtatgggtcggcccgtcaagcccgattaattttagggcttggacattaaatattgagcccaaattgttatagggc 12030169  T
Q  220 tttttagtccggccctaaaaa 240  Q
    |||||||  ||| ||||||||    
T  12030170 tttttagctcggtcctaaaaa 12030190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 26489216 - 26489250
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccg 154  Q
    |||||||||||||| ||||||||||||||||||||    
T  26489216 tagagctgtcaaaatgggccgggccgtatggaccg 26489250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 19240744 - 19240781
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggcc 157  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  19240744 tagagctgtcaaaacgggccgggtcatatggaccggcc 19240781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 17543719 - 17543759
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggcc 157  Q
    ||||||||||||||||| ||||||||||||| || ||||||    
T  17543719 aactagagctgtcaaaatgggccgggccgtaagggccggcc 17543759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 1e-54; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 17547462 - 17547642
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||| ||| ||||| | |||||||| ||||||||| ||||||||||||||||||    
T  17547462 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagagcttgggcctaaaatattgagcccgaattttaataggac 17547561  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||||| || ||| ||||||||||||||| |||||| || ||||||| |||||||||||||    
T  17547562 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcggctagcccgttagcccgcataac 17547642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 2703144 - 2702963
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||||||||| |||||||| ||||||  |||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||     
T  2703144 ctagagctgtcaaaacgggccggcccgtatgggccggcccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 2703045  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||||||| ||||||||  || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  2703044 ctttttagcccggcccttaaaagcccagtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 2702963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 12577471 - 12577291
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    |||||||||||||||| || |||||| || || |||||| |||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||     
T  12577471 ctagagctgtcaaaacaggtcgggccttacgggccggcccgtttagcccgattatttatagggcttggaccttaaatattgagcccgaattttaataggg 12577372  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| || ||||||||||||| | || ||| |||||||||||||||| ||||| |||||||||| |||||||||||||    
T  12577371 ctttttagcccagccctaaaaagcctggtacccgttagggctagcccgaac-ggccgcgggtagcccgttagcccgcataac 12577291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 121 - 300
Target Start/End: Complemental strand, 15183892 - 15183712
Alignment:
Q  121 agagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggact 220  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||| || ||| ||||||| |||||||| ||||||||| |||||||||||||||| ||    
T  15183892 agagctgtcaaaacgggccgggccgtatgggccggcccgttttgccagaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggct 15183793  T
Q  221 ttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtag-cccgctagcccgcataac 300  Q
    |||||| |||||| | ||||||||| |  ||| |||||||||||||||||||||| |||||| |||| |||||||||||||    
T  15183792 ttttagcccggcctttaaaagcccggttcccgttagggctagcccgaacgggccgcgggtagccccgttagcccgcataac 15183712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 29641190 - 29641012
Alignment:
Q  122 gagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactt 221  Q
    |||||||||||||||||||| |||||||| ||| || ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||    
T  29641190 gagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctt 29641091  T
Q  222 tttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||| |||||||| ||||||||| || ||| |||||||| |||||| ||||||  ||||||||| | |||||||||||    
T  29641090 tttagcccggcccttaaaagcccgatacccgttagggctatcccgaatgggccgcaggtagcccgttggcccgcataac 29641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 122 - 294
Target Start/End: Complemental strand, 31511369 - 31511197
Alignment:
Q  122 gagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactt 221  Q
    |||||||||||||||||||| |||||||| ||| || ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||    
T  31511369 gagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctt 31511270  T
Q  222 tttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccg 294  Q
    ||||| |||||||| ||||||||| || ||| |||||||| ||| || |||||| |||||||||| |||||||    
T  31511269 tttagcccggcccttaaaagcccgatacccgttagggctatcccaaatgggccgcgggtagcccgttagcccg 31511197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 4171054 - 4170901
Alignment:
Q  147 atggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgc 246  Q
    |||| |||||| ||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||     
T  4171054 atgggccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 4170955  T
Q  247 tatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || ||| ||||||||||| ||| |||||| |||||||||| |||||||||||||    
T  4170954 tacccgttagggctagcctgaatgggccgcgggtagcccgttagcccgcataac 4170901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 112 - 300
Target Start/End: Complemental strand, 15068175 - 15067987
Alignment:
Q  112 cttgcaactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaatttt 211  Q
    ||||||||||||||||||||||||| |||| ||||||||  ||||| |||||||| || ||| ||||||| ||| |||| ||||||||| ||||||||||    
T  15068175 cttgcaactagagctgtcaaaacggaccggcccgtatgggtcggcccgtttagcctgaataaatatagggcttgtgcctaaaatattgagcccgaatttt 15068076  T
Q  212 aataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||| |||||||| |||||||| ||||||||| || ||| ||||||| |||| || ||| || |||||||||  |||||||||||||    
T  15068075 aatagggctttttagcccggcccttaaaagcccggtacccgttagggcttgcccaaatgggtcgcgggtagcccattagcccgcataac 15067987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 120 - 287
Target Start/End: Original strand, 21036030 - 21036197
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||| ||||| | | ||||||  ||||| ||||||||| | ||| ||||| |||||||||||||||||||| |||||||||||||||| |    
T  21036030 tagagctgtcaaaatgggccagactgtatgggtcggcccgtttagcccaactaaatatagagtttgggccttaaatattgagcccgaattttaatagggc 21036129  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgc 287  Q
    ||||||| |||||| ||||||||| |||| | | |||||||||||||||||| |||||||||||||||    
T  21036130 tttttagcccggccttaaaaagcctgctacctgttagggctagcccgaacggaccgagggtagcccgc 21036197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 116 - 300
Target Start/End: Complemental strand, 26555372 - 26555184
Alignment:
Q  116 caactagagctgtcaaaacgggccgggccg----tatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaatttt 211  Q
    |||||||||||||||||||||||||| | |    ||||| || ||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||    
T  26555372 caactagagctgtcaaaacgggccggacggcccatatgggccagcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaatttt 26555273  T
Q  212 aataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||| |||||||| |||||||| ||||||||| || ||| ||||| ||||||||| |||||| |||||||| | |||||||||||||    
T  26555272 aatagggctttttagcccggcccttaaaagcccggtacccgttagggttagcccgaatgggccgcgggtagccagttagcccgcataac 26555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 32897227 - 32897086
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| | |||||||| || | ||||||||| ||| || ||| |||||    
T  32897227 gtttagcccgattaattatagggcttgagccttaaatattgagcccgaattttaataaggctttttagcccagtcctaaaaagtccggtacccgttaggg 32897128  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  32897127 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 32897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 2067140 - 2067288
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||    
T  2067140 ccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtaccc 2067239  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| ||| |||||||||    
T  2067240 gttagggctagcccgaatgggccgcgggtagcccgttagtccgcataac 2067288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 13835885 - 13836065
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||| ||||||||||||| |||||||||| | | | || ||||||||||||||||||||||| |||||||||||||||| |  |||||||||  |||| |    
T  13835885 tagaactgtcaaaacgggacgggccgtataggctgacccgtttagcccgattaattatagggcttgggccttaaatattaaatccgaattttcgtagggc 13835984  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||||||||||||| || ||| ||||||||||||| ||||||||  | ||||||| |||||| ||||||    
T  13835985 tttttagcccggccctaaaaagcccgatacccgttagggctagcccggacgggccgcagatagcccgttagcccacataac 13836065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 286
Target Start/End: Complemental strand, 29034594 - 29034472
Alignment:
Q  164 gcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagc 263  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| || ||  ||||||||||    
T  29034594 gcccgtttaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggctagc 29034495  T
Q  264 ccgaacgggccgagggtagcccg 286  Q
    |||||||||||| ||||||||||    
T  29034494 ccgaacgggccgcgggtagcccg 29034472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 34178400 - 34178526
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatag 216  Q
    ||||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| ||| |||||||||||    
T  34178400 aactagagctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccaaattttaatag 34178499  T
Q  217 gactttttagtccggccctaaaaagcc 243  Q
    | |||||||| |||||||| |||||||    
T  34178500 ggctttttagcccggcccttaaaagcc 34178526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 9035214 - 9035066
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| |||||||||||  || ||||||| |||||||| ||||||||| |||||||||||||||| ||||||||  ||||||| ||||||||| || ||    
T  9035214 ccggcccgtttagcccgaacaaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcacggcccttaaaagcccggtaccc 9035115  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | |||||||| |||||| |||||| |||||||||| |||||||||||||    
T  9035114 gttagggctatcccgaatgggccgcgggtagcccgttagcccgcataac 9035066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 22988285 - 22988137
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||| ||| ||||||||| | || ||||||||||| |||||||| |||||||| ||||||||| || ||    
T  22988285 ccggcccgtttagcccgaataaatatagggcttggacctaaaatattgagctcggattttaatagggctttttagcccggcccttaaaagcccggtaccc 22988186  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  22988185 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 22988137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 23800111 - 23800259
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| |||| ||| ||||||||| | || ||||||||||| |||||||| |||||||| ||||||||| || ||    
T  23800111 ccggcccgtttagcccgaataaatatagggcttggacctaaaatattgagctcggattttaatagggctttttagcccggcccttaaaagcccggtaccc 23800210  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  23800211 gttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 23800259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 13087706 - 13087817
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattataggg-tttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||| | ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  13087706 tagagctgtcaaaacggactgggccgtatgg-ccggtccgtttagcccgattaattatagggctttgggccttaaatattgagcccgaattttaatagga 13087804  T
Q  219 ctttttagtccgg 231  Q
    |||||||| ||||    
T  13087805 ctttttagcccgg 13087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 26483655 - 26483756
Alignment:
Q  171 taattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacg 270  Q
    ||||||||||| ||| |||||||||||||| ||| ||||||||||||  ||||||| |||||||||||||| ||| |||||| ||||||||||| |||||    
T  26483655 taattatagggcttgagccttaaatattgagccctaattttaatagggttttttagcccggccctaaaaagtccggtatccgttagggctagcctgaacg 26483754  T
Q  271 gg 272  Q
    ||    
T  26483755 gg 26483756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31045056 - 31045179
Alignment:
Q  1 ataagcaaagagctcagttaaagaccataaacaaagtctgacatgaatcatcacatgcaag----------gtgtatgtaaaggaaaagttgcacttctc 90  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||          ||||||||||||||||||||||  |||||    
T  31045056 ataagcaaagagctcagataaagaccataaac--agtctgacatgaatcatctcatgcaaggtattcagcagtgtatgtaaaggaaaagttgctattctc 31045153  T
Q  91 ctatagcctaactaaacgaagcttgc 116  Q
    ||| ||||| || |||||||||||||    
T  31045154 ctaaagcctcaccaaacgaagcttgc 31045179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 28985282 - 28985422
Alignment:
Q  163 agcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggctag 262  Q
    |||| |||||||||||||  ||||||||||||| |||| | || ||||| ||||| |||||||| || ||||||||||||||| ||  || |||||||||    
T  28985282 agcctgattaattataggacttgggccttaaattttgagcacggatttttatagggctttttagccctgccctaaaaagcccggtacacgttagggctag 28985381  T
Q  263 cccgaacgg---gccgagggtagcccgctagcccgcataac 300  Q
    |||| | ||   ||||  ||||||||| |||||||||||||    
T  28985382 cccgtatgggccgccgccggtagcccgttagcccgcataac 28985422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 31045317 - 31045358
Alignment:
Q  349 tatctgtatccaattgtcacaacatacatttaattaaactct 390  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  31045317 tatccgtatccaattgtcacaacatacatttaatttaactct 31045358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 2289979 - 2290038
Alignment:
Q  213 ataggactttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacggg 272  Q
    ||||| |||||||| ||||||||||||||| || || ||| ||||||||||| |||||||    
T  2289979 atagggctttttagcccggccctaaaaagctcggtacccgttagggctagcctgaacggg 2290038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 2289923 - 2289984
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattataggg 181  Q
    ||||||||||||||  ||| |||| ||| |||| | || |||||||||||||||||||||||    
T  2289923 tagagctgtcaaaataggctgggctgtacggactgacccgtttagcccgattaattataggg 2289984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 17868492 - 17868448
Alignment:
Q  202 cccgaattttaataggactttttagtccggccctaaaaagcccgc 246  Q
    |||| |||| |||||| |||||||| |||||||||||||||||||    
T  17868492 cccgtatttaaatagggctttttagcccggccctaaaaagcccgc 17868448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 17878275 - 17878231
Alignment:
Q  202 cccgaattttaataggactttttagtccggccctaaaaagcccgc 246  Q
    |||| |||| |||||| |||||||| |||||||||||||||||||    
T  17878275 cccgtatttaaatagggctttttagcccggccctaaaaagcccgc 17878231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 103255 - 103079
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||    |||||| ||| | |||| | |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |    
T  103255 tagagctgtcaaaac----cgggccatatcggccggtccgtttagcccgattaattatagggtttgggctttaaatattgagcccgaattttaatagggc 103160  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||  |||| ||| |||||||||||||||||    
T  103159 tttttagcccggccctaaaaagcccgctatccgttagggctagcccgaacgggttgaggatagtccgctagcccgcataac 103079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 56193 - 56374
Alignment:
Q  118 actagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagg 217  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||| ||||| ||| ||||||||| |||||| ||||||||| ||||||||||||||||    
T  56193 actagagctgtcaaaacgggccaggccgtatgggccggcccgtttatcccgaataaatatagggtt-gggcctaaaatattgagcccgaattttaatagg 56291  T
Q  218 actttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
     |||||||| |||||||| |||| |||| || ||| ||||||||||||||||||||||  ||||||||| |||||||||||||    
T  56292 gctttttagcccggcccttaaaatcccggtacccgttagggctagcccgaacgggccgcaggtagcccgttagcccgcataac 56374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 231787 - 231673
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| |||| ||    
T  231787 ccggcccgtttagcccgattaattatagagcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcctgctaccc 231688  T
Q  252 gatagggctagcccg 266  Q
    | |||||||||||||    
T  231687 gttagggctagcccg 231673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 120 - 300
Target Start/End: Original strand, 27587 - 27767
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||| ||| |||||| |||||| || ||||||||| |||||||||||||||| |    
T  27587 tagagctgtcaaaacgggccggtccgtatgggccggcccgtttagcccgaataaatataggatttgggtctaaaatattgagcccgaattttaatagggc 27686  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||| | |||||||| ||||||||| || ||| ||||||||||||||| |||||| || ||||||| |||||||||||||    
T  27687 tttttcgcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcggatagcccgttagcccgcataac 27767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 159 - 299
Target Start/End: Complemental strand, 2457 - 2317
Alignment:
Q  159 gtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgataggg 258  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| |||||| || ||| |||||    
T  2457 gtttaggccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggcttttttgtccggccctaaatagcccggtacccgttaggg 2358  T
Q  259 ctagcccgaacgggccgagggtagcccgctagcccgcataa 299  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  2357 ctagcccgaacgggccgcgggtagcccgttagcccgcataa 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 40204 - 40024
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||| |||||| |||  |||||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||| ||||||||||| |    
T  40204 tagagctgtcaaaacgggctgggccgaatgtgccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgtattttaatagggc 40105  T
Q  220 tttttagtccggccctaaaaagcccgctatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||||| ||||||| | || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  40104 tttttagcccggcccttaaaagcctggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 40024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 2380 - 2506
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||| |||||| |||  |||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |    
T  2380 tagagctgtcaaaacgggctgggccgaatgtgccggcccgtttagcccgattaattatagggcttggaccttaaatattgagcccgaattttaatagggc 2479  T
Q  220 tttttagtccggccctaaaaagcccgc 246  Q
    ||||||| |||||||| ||||||||||    
T  2480 tttttagcccggccctgaaaagcccgc 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 9316 - 9442
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||| |||||| |||  |||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |    
T  9316 tagagctgtcaaaacgggctgggccgaatgtgccggcccgtttagcccgattaattatagggcttggaccttaaatattgagcccgaattttaatagggc 9415  T
Q  220 tttttagtccggccctaaaaagcccgc 246  Q
    ||||||| |||||||| ||||||||||    
T  9416 tttttagcccggccctgaaaagcccgc 9442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 12918 - 12770
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatcc 251  Q
    |||||| ||||||||||| ||| ||||||| ||||| || ||||||||| |||||||||||||||| ||||||||  ||||||| ||||||| | |||||    
T  12918 ccggcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagggctttttagctcggcccttaaaagcctggtatcc 12819  T
Q  252 gatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
      ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  12818 attagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 12770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 300
Target Start/End: Complemental strand, 7889 - 7751
Alignment:
Q  162 tagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggcta 261  Q
    |||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| || ||| |||||||     
T  7889 tagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggctt 7790  T
Q  262 gcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||| |||||| |||||||||| || ||||||||||    
T  7789 gcccgaatgggccgcgggtagcccgttaacccgcataac 7751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 950 - 1090
Alignment:
Q  160 tttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgctatccgatagggc 259  Q
    |||||||| | ||| ||||||| |||||||| ||||||||| | |||||||||||||| || ||||| |||||||| ||||||||| || ||| ||||||    
T  950 tttagcccaaataaatatagggcttgggcctaaaatattgagctcgaattttaatagggctctttagcccggcccttaaaagcccggtacccgttagggc 1049  T
Q  260 tagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  1050 tagcccgaatgggccgcgggtagcccgttagcccgcataac 1090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 45841 - 45936
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaata 215  Q
    ||||||||||||||||||| ||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45841 tagagctgtcaaaacgggctgggacgtatgggccggcctgtttagcctgattaattatagggtttgggccttaaatattgagcccgaattttaata 45936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 45960 - 46006
Alignment:
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||||    
T  45960 tagggctagcccgaacgggccgcgggttgcccgatagcccgcataac 46006  T

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Target: scaffold1243 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 266
Target Start/End: Original strand, 1975 - 2122
Alignment:
Q  119 ctagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaatagga 218  Q
    ||||||||||||||||||| |||| ||||||| || ||| ||||||||||| ||| ||||||| |||||||| |||||||||  |||||||||||||||     
T  1975 ctagagctgtcaaaacgggtcgggtcgtatgggccagcccgtttagcccgaataaatatagggcttgggcctaaaatattgagtccgaattttaataggg 2074  T
Q  219 ctttttagtccggccctaaaaagcccgctatccgatagggctagcccg 266  Q
    || ||||| ||| |||| | ||||||| || ||| |||||||||||||    
T  2075 ctatttagcccgacccttataagcccggtacccgttagggctagcccg 2122  T

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Target: scaffold0583 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 2201 - 2312
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||| ||||||||||||  ||||||||||| ||||||  |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||      
T  2201 tagagttgtcaaaacgggtggggccgtatgggccggcccatttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggt 2300  T
Q  220 tttttagtccgg 231  Q
    ||||||| ||||    
T  2301 tttttagcccgg 2312  T

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Target: scaffold0173 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 244
Target Start/End: Complemental strand, 22091 - 21967
Alignment:
Q  120 tagagctgtcaaaacgggccgggccgtatggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggac 219  Q
    ||||||||||||||||||||||  |||||||  || ||  |||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||||| |    
T  22091 tagagctgtcaaaacgggccggcacgtatgggacgacccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 21992  T
Q  220 tttttagtccggccctaaaaagccc 244  Q
    ||||||| |||||||| ||||||||    
T  21991 tttttagcccggcccttaaaagccc 21967  T

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Target: scaffold0021 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 125968 - 125873
Alignment:
Q  152 ccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgct 247  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||| || ||||||||||||| |||||||| |||||||||||||| |||||    
T  125968 ccggcccgtttagcccgattaattatagggcctgggccttaaatattgagcctgaattttaatagggctttttagcccggccctaaaaagtccgct 125873  T

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Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 120995 - 120949
Alignment:
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  120995 tagggctaacccgaacgggccgatggtagcccgctagcccgcataac 120949  T

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Target: scaffold0831 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 192 - 39
Alignment:
Q  147 atggaccggccggtttagcccgattaattatagggtttgggccttaaatattgatcccgaattttaataggactttttagtccggccctaaaaagcccgc 246  Q
    |||| |||||| ||||||||||| ||| |||| || ||||| || ||||||||| || |||||||||||||| ||||||| |||||||| ||||| |||     
T  192 atgggccggcccgtttagcccgaataaatataaggattgggtctaaaatattgagcctgaattttaataggaatttttagcccggcccttaaaagtccgg 93  T
Q  247 tatccgatagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    || ||| ||||||||||| ||| ||| || |||||||||| |||||| ||||||    
T  92 tacccgttagggctagcctgaatgggtcgcgggtagcccgttagcccccataac 39  T

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Target: scaffold0018 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 172331 - 172255
Alignment:
Q  1 ataagcaaagagctcagttaaagaccataaacaaagtctgacatgaatcatcacatgcaaggtgtatgtaaaggaaa 77  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| || | || |||||||||||    
T  172331 ataagcaaatagctcagataaagaccataaacaaagtgtgacatgaatcatcacatgaaacgggtgtgtaaaggaaa 172255  T

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Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 356
Target Start/End: Complemental strand, 172187 - 172144
Alignment:
Q  313 ataacaggtcttcatcttcacattaaaaacattctgtatctgta 356  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||    
T  172187 ataacaggtcttcatcttcacattaaaaacattttgtatatgta 172144  T

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Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 51418 - 51464
Alignment:
Q  254 tagggctagcccgaacgggccgagggtagcccgctagcccgcataac 300  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  51418 tagggctagcctgaacgggctgagggtagcccgctagcccgcataac 51464  T

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Target: scaffold1449 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 1680 - 1640
Alignment:
Q  117 aactagagctgtcaaaacgggccgggccgtatggaccggcc 157  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  1680 aactagagctgtcaaaacgggccggcccgtatgggccggcc 1640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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