View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21444_high_23 (Length: 320)
Name: NF21444_high_23
Description: NF21444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21444_high_23 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 22 - 320
Target Start/End: Complemental strand, 7300457 - 7300159
Alignment:
| Q |
22 |
catcatcaatatcatgaataaggaaagaatattttgtgaaaaaatgtatcctagtacaatgtgaacgcattgaacctttgtgctttttgttaatgatttg |
121 |
Q |
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| T |
7300457 |
catcatcaatatcatgaataaggaaagaatcttttgtgaagaaatgtatcctagtacaatgtgaacgcattgaacctttgtgctttttattaatgatttg |
7300358 |
T |
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| Q |
122 |
tatctttcatgaacgacatgcttcatatcataaatgttaaatgacatcctaagatgttggaatacaaacactctttaattaatctccttaatctgatgtt |
221 |
Q |
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| T |
7300357 |
tatctttcatgaacgacatgcttcatatcataaatgttaaatgacatcctaaaatgttggaatacaaacactctttaattaatctccttaatctgatgtt |
7300258 |
T |
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| Q |
222 |
tgtctaatgtaaacgtggtttaatggtgcaccattagtaacaattacaaacattacataaatccttttaattaatattatcatttttaagggttgatat |
320 |
Q |
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| T |
7300257 |
tgtctaatgtaaacgtggtttaatggtgcaccattagtaacaattacaaacattacataaatccttttaattaatattatcatttttaagggttgatat |
7300159 |
T |
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