View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21445_high_4_N (Length: 322)

Name: NF21445_high_4_N
Description: NF21445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21445_high_4_N
NF21445_high_4_N
[»] chr7 (17 HSPs)
chr7 (136-309)||(3520867-3521040)
chr7 (4-96)||(32308121-32308213)
chr7 (11-95)||(6630879-6630963)
chr7 (4-98)||(19206051-19206145)
chr7 (11-62)||(3721101-3721152)
chr7 (10-85)||(35297649-35297724)
chr7 (11-65)||(7328688-7328742)
chr7 (11-97)||(24339650-24339736)
chr7 (4-70)||(49107822-49107887)
chr7 (4-65)||(1433455-1433516)
chr7 (4-65)||(5235987-5236048)
chr7 (68-97)||(7197273-7197302)
chr7 (4-61)||(22484026-22484083)
chr7 (4-65)||(22602707-22602768)
chr7 (11-91)||(15902830-15902910)
chr7 (4-60)||(27093415-27093471)
chr7 (4-60)||(27184830-27184886)
[»] chr3 (9 HSPs)
chr3 (1-97)||(8039800-8039896)
chr3 (12-83)||(15812802-15812871)
chr3 (4-84)||(16192728-16192808)
chr3 (4-95)||(26290372-26290463)
chr3 (4-51)||(32804551-32804598)
chr3 (4-94)||(10690231-10690320)
chr3 (4-98)||(15796258-15796352)
chr3 (2-48)||(21211287-21211333)
chr3 (1-50)||(4201394-4201443)
[»] chr2 (11 HSPs)
chr2 (11-96)||(36756310-36756395)
chr2 (4-93)||(44860321-44860410)
chr2 (2-95)||(22084797-22084892)
chr2 (3-95)||(2331794-2331884)
chr2 (5-50)||(41942107-41942152)
chr2 (6-49)||(23921256-23921299)
chr2 (11-95)||(18889557-18889642)
chr2 (1-78)||(36281683-36281760)
chr2 (4-49)||(42832289-42832334)
chr2 (9-61)||(32199141-32199193)
chr2 (42-94)||(35056907-35056959)
[»] chr5 (10 HSPs)
chr5 (4-82)||(3966504-3966582)
chr5 (4-66)||(36838544-36838606)
chr5 (4-93)||(18592074-18592163)
chr5 (11-97)||(19579709-19579795)
chr5 (4-94)||(36642730-36642820)
chr5 (11-65)||(40211964-40212018)
chr5 (6-95)||(30098329-30098418)
chr5 (11-75)||(2236772-2236836)
chr5 (42-94)||(6401537-6401589)
chr5 (53-97)||(30080466-30080510)
[»] chr4 (10 HSPs)
chr4 (11-95)||(30838218-30838302)
chr4 (5-97)||(30982843-30982935)
chr4 (5-94)||(903924-904013)
chr4 (42-94)||(5414140-5414192)
chr4 (11-78)||(847959-848026)
chr4 (4-51)||(22440611-22440658)
chr4 (4-61)||(5775359-5775416)
chr4 (12-61)||(9996849-9996898)
chr4 (9-66)||(40865033-40865090)
chr4 (21-82)||(44132624-44132685)
[»] chr1 (15 HSPs)
chr1 (3-50)||(28674800-28674847)
chr1 (13-84)||(44482240-44482311)
chr1 (11-97)||(9828052-9828138)
chr1 (13-98)||(25361896-25361979)
chr1 (4-61)||(2784557-2784614)
chr1 (4-97)||(9629865-9629958)
chr1 (4-89)||(34371715-34371799)
chr1 (6-78)||(21038086-21038158)
chr1 (23-98)||(31694674-31694749)
chr1 (11-62)||(40181879-40181930)
chr1 (23-97)||(5944303-5944377)
chr1 (4-60)||(1864882-1864938)
chr1 (1-65)||(6427348-6427412)
chr1 (11-95)||(16164282-16164366)
chr1 (4-88)||(17754312-17754396)
[»] scaffold0123 (1 HSPs)
scaffold0123 (4-94)||(44493-44583)
[»] chr6 (17 HSPs)
chr6 (11-97)||(16766705-16766791)
chr6 (4-95)||(25038038-25038129)
chr6 (4-62)||(5732510-5732568)
chr6 (1-62)||(7265593-7265654)
chr6 (1-78)||(21395292-21395368)
chr6 (11-78)||(9195738-9195805)
chr6 (1-48)||(31579239-31579286)
chr6 (11-65)||(7723247-7723301)
chr6 (11-65)||(9025491-9025545)
chr6 (12-94)||(9629392-9629474)
chr6 (4-87)||(1532241-1532321)
chr6 (6-91)||(10294110-10294195)
chr6 (14-94)||(10339093-10339174)
chr6 (4-65)||(32320666-32320727)
chr6 (1-49)||(7569181-7569229)
chr6 (15-91)||(26562701-26562777)
chr6 (1-65)||(34073344-34073408)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-93)||(9716-9798)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-97)||(241602-241688)
[»] chr8 (10 HSPs)
chr8 (4-94)||(11803260-11803350)
chr8 (11-97)||(15816094-15816180)
chr8 (4-72)||(11927076-11927144)
chr8 (11-62)||(13844596-13844647)
chr8 (11-78)||(25172682-25172749)
chr8 (11-97)||(2572021-2572107)
chr8 (11-97)||(22651984-22652070)
chr8 (9-98)||(6065621-6065710)
chr8 (3-51)||(8798842-8798890)
chr8 (11-82)||(29776044-29776113)
[»] scaffold0136 (1 HSPs)
scaffold0136 (4-93)||(3818-3907)
[»] scaffold0044 (1 HSPs)
scaffold0044 (12-97)||(53189-53274)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-94)||(68210-68299)
[»] scaffold0018 (1 HSPs)
scaffold0018 (4-33)||(192278-192307)
[»] scaffold1528 (1 HSPs)
scaffold1528 (4-88)||(1036-1120)
[»] scaffold0019 (1 HSPs)
scaffold0019 (57-97)||(71779-71819)


Alignment Details
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 136 - 309
Target Start/End: Original strand, 3520867 - 3521040
Alignment:
Q  136 attacccttccagttccagttgaagaagcttcacaacgaacagagaaacgctttgaatttgttggagttctgcaaattccatttgcaagaaaccgtcttt 235  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||    
T  3520867 attacccttccagtgccagttgaagaagcttcacaacgaacagagaaacgcttcgaatttgtttgagttctgcaaattccatttgctagaaaccgtcttt 3520966  T
Q  236 gatcgaaaggaagagaagatttgagtgaaatacgtttgtccaagaaagagagagaaacaccgtgatgatgagaa 309  Q
    |||  || ||||| || |||||||||||||  |||||  |  |||||||||||||||||| |||||||||||||    
T  3520967 gatttaatggaagtgatgatttgagtgaaacgcgtttagcggagaaagagagagaaacacggtgatgatgagaa 3521040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 32308121 - 32308213
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccg 96  Q
    |||||| ||||||||||||||||| ||||| || ||| ||||| ||||  || |||||||||  |||| |||||| |||||||||||||||||    
T  32308121 acaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccg 32308213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 6630963 - 6630879
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacacc 95  Q
    ||||||||||||||| | || || || ||| ||||||||||  ||| ||||||||| |||||||||||||||| || ||||||||    
T  6630963 taataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcccgacacc 6630879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 19206051 - 19206145
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgga 98  Q
    |||||| ||||||||||||||||| ||||| || | ||||||||||||  |||||||| |||| ||||| || |  |||||| || |||||||||    
T  19206051 acaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtcttgttggtgtcagagatgacacatatctgacaccgga 19206145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 3721101 - 3721152
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcg 62  Q
    ||||||||||||||||| ||||| || ||||||||||||||  |||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcg 3721152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 35297724 - 35297649
Alignment:
Q  10 ttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacat 85  Q
    |||||||||||||||||| ||||| || | ||||||||||||  | |||||||||||  ||||| ||| |||||||    
T  35297724 ttaataatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgttgatgtcgaacataacacat 35297649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 7328742 - 7328688
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    ||||||||||||||||| ||||| || ||| ||||||||||  ||||||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgt 7328688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 24339650 - 24339736
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||| ||||| ||||| || ||| |||||| | |  ||||||||||||  ||||||||||| |||| | |||||||||||    
T  24339650 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgg 24339736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 49107822 - 49107887
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtg 70  Q
    |||||| ||||||||||||||||  ||||| |||||| | ||||||||  |||||||||||||||||    
T  49107822 acaccgctaataatttgagaaaac-acataattgagtgtgattatatgtgtcggtgtcgtgttagtg 49107887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 1433455 - 1433516
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    |||||||||||||||||||||||| ||||  ||  || ||||||||||  ||||||||||||    
T  1433455 acaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgt 1433516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 5235987 - 5236048
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    |||||| ||||||||| ||||||||| ||| || ||| |||||||||  |||||||||||||    
T  5235987 acaccgctaataatttaagaaaattatataatttagtgtaattatatatatcggtgtcgtgt 5236048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 97
Target Start/End: Complemental strand, 7197302 - 7197273
Alignment:
Q  68 gtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||||||||||||||||||||||    
T  7197302 gtgtcggacacaacacatgtccgacaccgg 7197273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 22484026 - 22484083
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtc 61  Q
    |||||| ||||||||| |||||||| |||| || ||||||||||||||  ||||||||    
T  22484026 acaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtc 22484083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 22602768 - 22602707
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    ||||||| ||| |||||||||||| ||||| || ||| ||||||||||  ||||||||||||    
T  22602768 acaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 15902830 - 15902910
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccga 91  Q
    ||||||||||| ||||| ||||| || ||| ||||||||||  ||||||| ||||  || |||||||| ||||||| ||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacacatgcccga 15902910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 27093471 - 27093415
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgt 60  Q
    |||||| ||||||||| ||||||| ||||| || ||| ||||||||||| |||||||    
T  27093471 acaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 27184830 - 27184886
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgt 60  Q
    |||||| ||||||||| ||||||| ||||| || ||| ||||||||||| |||||||    
T  27184830 acaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8039896 - 8039800
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||| ||||||||||||||||||| ||| || ||| ||||||||||  ||||||||||||  ||||||||||  | ||||||||||||||||    
T  8039896 ccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgg 8039800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 15812871 - 15812802
Alignment:
Q  12 aataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacac 83  Q
    |||||||||||||||| |||||  | ||| |||||||||||  |||||||||||| ||||||||||| ||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattatatgc--cggtgtcgtgttggtgtcggacacgacac 15812802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 16192808 - 16192728
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacaca 84  Q
    |||||||||||||||||||||||| ||||| || ||| ||||||||||  | | ||||||||  ||||| ||||| |||||    
T  16192808 acaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgacaca 16192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 26290372 - 26290463
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacacc 95  Q
    ||||| |||||||||||||||||| ||||||||  || ||||||||||  || |||||||    |||||||| ||  |||||||||||||||    
T  26290372 acaccattaataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtcgttccggtgtcggaaacggcacatgtccgacacc 26290463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 32804598 - 32804551
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatg 51  Q
    |||||||||||||||||||||||| ||||| || ||| ||||||||||    
T  32804598 acaccgttaataatttgagaaaatcacataatttagtgtaattatatg 32804551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 10690320 - 10690231
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    |||||| ||||||| ||||||||| ||||| || ||| |||||||||   ||||| | || ||||||||||||||||||| |||| |||||    
T  10690320 acaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcggtattgt-ttagtgtcggacacaacacgtgtctgacac 10690231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 15796352 - 15796258
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgga 98  Q
    |||| ||||||||||||| ||||| | ||| || ||| |||||| |    ||||||||||||  |||||||||||||||| ||||| ||||||||    
T  15796352 acacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccgga 15796258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 21211287 - 21211333
Alignment:
Q  2 caacaccgttaataatttgagaaaattacatagttgagtataattat 48  Q
    |||||| | |||||||||||||||||||||||||| ||| |||||||    
T  21211287 caacacggataataatttgagaaaattacatagttcagtgtaattat 21211333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4201394 - 4201443
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattatat 50  Q
    ||||||||||||||||||||| ||||| ||||| || ||| |||||||||    
T  4201394 ccaacaccgttaataatttgaaaaaatcacataattaagtgtaattatat 4201443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 36756395 - 36756310
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccg 96  Q
    |||||||||||  |||| ||||| || ||| |||||||| |  |||||||||||||||||||| ||||||||||||||||||||||    
T  36756395 taataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtccgacaccg 36756310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 44860321 - 44860410
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgaca 93  Q
    |||||| |||||||||||||||||  |||| || ||| ||||||||||  ||||||||||||| |||| |||||| |||  |||||||||    
T  44860321 acaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgaca 44860410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 22084892 - 22084797
Alignment:
Q  2 caacaccgttaataatttgagaaaattacatagttgagtataa--ttatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacacc 95  Q
    |||||||||||||||||||||||||| | ||| || ||| |||  |||||||   |||| |||||| ||||||||||||||||| |||| ||||||    
T  22084892 caacaccgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgtctgacacc 22084797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 2331794 - 2331884
Alignment:
Q  3 aacaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacacc 95  Q
    |||||| |||||||||||||||||| ||||| || ||| || |||| ||  |||||||||||| |||||||| |||| ||| |||| ||||||    
T  2331794 aacaccattaataatttgagaaaatcacataattcagtgtatttatgtg--tcggtgtcgtgtcagtgtcgggcacagcacgtgtctgacacc 2331884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 41942107 - 41942152
Alignment:
Q  5 caccgttaataatttgagaaaattacatagttgagtataattatat 50  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||    
T  41942107 caccgttaaaaatttgagaaaattacataattcagtataattatat 41942152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 23921256 - 23921299
Alignment:
Q  6 accgttaataatttgagaaaattacatagttgagtataattata 49  Q
    |||||||||||||||||||||||||||| || ||| ||||||||    
T  23921256 accgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 18889642 - 18889557
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggaca-caacacatgtccgacacc 95  Q
    |||||| |||||||||| ||||| || ||| |||| |||||  |||||||| |||| |||||||||| | || |||||||||||||    
T  18889642 taataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacc 18889557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36281683 - 36281760
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacac 78  Q
    |||| |||||||||||||||||||||| ||||| || ||| |||| |||||  ||| ||| ||||  |||||||||||    
T  36281683 ccaataccgttaataatttgagaaaatcacataatttagtgtaatcatatgtttcgatgtggtgtccgtgtcggacac 36281760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 42832334 - 42832289
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattata 49  Q
    |||||| ||||||||||||||||||||||| || ||| ||||||||    
T  42832334 acaccgctaataatttgagaaaattacatatttcagtgtaattata 42832289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 32199193 - 32199141
Alignment:
Q  9 gttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtc 61  Q
    ||||||||||||| ||||| ||||| || |||||||||||||| ||| |||||    
T  32199193 gttaataatttgataaaatcacataattaagtataattatatgtatcagtgtc 32199141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 35056907 - 35056959
Alignment:
Q  42 taattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    ||||||||||  ||||||||||||  ||||||||||| |||| ||||||||||    
T  35056907 taattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacac 35056959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 3966504 - 3966582
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaaca 82  Q
    |||||| ||||||||||||||||| ||| | || ||| ||||||||||  |||||||||||| ||||||||||||||||    
T  3966504 acaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaaca 3966582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 36838544 - 36838606
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgtt 66  Q
    |||||| ||||||||||||||||||||||| || ||| ||||||||||  |||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 18592074 - 18592163
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgaca 93  Q
    |||||| ||||| ||| ||||||||||||| || | | ||||||||||   |||||||||||  |||||||||||||||| |||| ||||    
T  18592074 acaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtctgaca 18592163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 19579709 - 19579795
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||||||||| ||||| || |||  ||||| | |  |||||||||||| |||||||||||| ||| |||||  |||||||    
T  19579709 taataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgg 19579795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 36642820 - 36642730
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    |||| ||||||||||||| ||| | ||||| || ||| ||| |||| |  |||||||| |||| ||||||||||| |||| ||||||||||    
T  36642820 acacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgttggtgtcggacacgacacgtgtccgacac 36642730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 40211964 - 40212018
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    |||||| |||||||||||||||| || | |||||| ||||| |||||||||||||    
T  40211964 taataaattgagaaaattacataattcaatataatcatatgtatcggtgtcgtgt 40212018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 30098329 - 30098418
Alignment:
Q  6 accgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacacc 95  Q
    |||||||||||||||||||||| ||||| || | | ||||||||    ||||| ||| || |||||||||||| |||| |||| ||||||    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacacc 30098418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 2236836 - 2236772
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcgga 75  Q
    ||||||||| ||||||||| ||| || | | ||||| ||||||||||||||||||  ||||||||    
T  2236836 taataatttaagaaaattatataatttaatgtaattttatgcatcggtgtcgtgtccgtgtcgga 2236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 6401537 - 6401589
Alignment:
Q  42 taattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    ||||||||||  |||||||||||| |||||||||||| |||| |||| |||||    
T  6401537 taattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacac 6401589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 30080510 - 30080466
Alignment:
Q  53 atcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    |||||||| ||||||||||||||||  ||||||||| ||||||||    
T  30080510 atcggtgtggtgttagtgtcggacatgacacatgtcggacaccgg 30080466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 30838218 - 30838302
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacacc 95  Q
    ||||||||||| ||||||| ||| || ||| |||||||| | ||||||||||||| |||||||||| | |||| |||||||||||    
T  30838218 taataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacacc 30838302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 30982935 - 30982843
Alignment:
Q  5 caccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||| |||| |||||||||||| ||||| || ||| |||||||| |  ||||||||||||  ||||| ||||| |||| |||||||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgg 30982843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 903924 - 904013
Alignment:
Q  5 caccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    ||||||||||||||||||||||| ||||| || ||| |||||||||| ||| || |||| |  |||| |||||| |||  ||||||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgtgtccgacac 904013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 5414192 - 5414140
Alignment:
Q  42 taattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    |||||||||| ||||||||||||| |||||||||||| |||| |||| |||||    
T  5414192 taattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacac 5414140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 847959 - 848026
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacac 78  Q
    ||||||||||||||||||||||| || | |||||||| | |  |||||||| |||| |||||||||||    
T  847959 taataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacac 848026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 22440658 - 22440611
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatg 51  Q
    |||||||||||||||||||||||| ||||| || ||| ||||||||||    
T  22440658 acaccgttaataatttgagaaaatcacataattcagtgtaattatatg 22440611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 5775416 - 5775359
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtc 61  Q
    ||||| |||||||||||||||||| ||||| || ||| ||||||||||  ||||||||    
T  5775416 acaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 9996849 - 9996898
Alignment:
Q  12 aataatttgagaaaattacatagttgagtataattatatgcatcggtgtc 61  Q
    |||||||||||||||| ||||| || ||||||||||||||  ||||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgtctcggtgtc 9996898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 40865033 - 40865090
Alignment:
Q  9 gttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgtt 66  Q
    |||||||||||| ||||||  || | || |||||||||||||| ||||||||||||||    
T  40865033 gttaataatttgtgaaaatcgcacaattcagtataattatatgtatcggtgtcgtgtt 40865090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 44132685 - 44132624
Alignment:
Q  21 agaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaaca 82  Q
    ||||||| || || || ||||||||||||||  ||||||||||||| |||||| ||||||||    
T  44132685 agaaaatcacgtaattcagtataattatatgtgtcggtgtcgtgttggtgtcgaacacaaca 44132624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 28674800 - 28674847
Alignment:
Q  3 aacaccgttaataatttgagaaaattacatagttgagtataattatat 50  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||    
T  28674800 aacaccgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 44482240 - 44482311
Alignment:
Q  13 ataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacaca 84  Q
    ||||||||||||||| ||||| || ||| ||||||||||  ||||||||||||  ||||||||||| |||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacaca 44482311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 9828052 - 9828138
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||| ||||| ||||| || ||| ||||| ||||  ||||||||||||  ||||| ||||| |||| |||||||||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgg 9828138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 25361896 - 25361979
Alignment:
Q  13 ataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgga 98  Q
    ||||||||||||||| ||||| || ||| ||||||||||  || |||||||||  |||||||||||   |||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacac--gacatgtccgacaccgga 25361979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 2784557 - 2784614
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtc 61  Q
    |||||||||| ||||| ||||||| ||||| |||||||||||||||||  ||||||||    
T  2784557 acaccgttaaaaatttaagaaaatcacataattgagtataattatatgtgtcggtgtc 2784614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 9629958 - 9629865
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    |||||| ||||||||||| ||||| | ||| || ||| | |||||| |  ||||||||||||   |||||||||| ||||||||||||||||||    
T  9629958 acaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgg 9629865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 34371715 - 34371799
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtcc 89  Q
    |||||| |||||||| |||||||| ||||| || ||| ||||||||||  ||||||||||||| |||||||| || |||| |||||    
T  34371715 acaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtcc 34371799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 21038086 - 21038158
Alignment:
Q  6 accgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacac 78  Q
    |||| ||||||||| ||||||||||||| || ||| |||| |||||| || |||||||||  |||||||||||    
T  21038086 accgctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacac 21038158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 31694749 - 31694674
Alignment:
Q  23 aaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgga 98  Q
    ||||| ||||| || |||||||||| | |  ||||||||||||  |||||||||||||||||| | ||||||||||    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccgga 31694674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 40181879 - 40181930
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcg 62  Q
    ||||||||||||||||| ||||| || ||| |||||||||| ||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 5944303 - 5944377
Alignment:
Q  23 aaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||| ||||| || ||| |||||||| |  ||||||||||||   || ||||||||||||||||||||||||||    
T  5944303 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgg 5944377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 1864938 - 1864882
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgt 60  Q
    |||| ||||||||||||||||||| ||||| || ||| ||||||||||  |||||||    
T  1864938 acacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6427348 - 6427412
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    ||||||||| ||||||||||||||||| ||||| || | | ||||||||||  | ||||||||||    
T  6427348 ccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 16164366 - 16164282
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacacc 95  Q
    ||||||||||| ||||| ||||| || | | ||||||||||  ||  ||||||||| |||| |||| |||||| |||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacacc 16164282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 17754312 - 17754396
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtc 88  Q
    |||||| ||||||||||| ||||||||||| || ||| ||| ||||||  || |||| ||||  |||| |||||||||| |||||    
T  17754312 acaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacatatgtc 17754396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 44583 - 44493
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    |||||| ||| ||||||||||||| ||||| || ||| ||||||||||  ||||| ||||||  |||| ||||||||||| ||||||||||    
T  44583 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacac 44493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 16766705 - 16766791
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||| ||||| ||||| || ||| |||||| | |  ||||||||||||  |||||||||||||||| |||||||||||||    
T  16766705 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgg 16766791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 25038129 - 25038038
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacacc 95  Q
    |||||||||||||||||||||||||||||| || ||| |||||| |    ||||| | ||||| ||||| ||||| |||| |||||||||||    
T  25038129 acaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacacc 25038038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 5732568 - 5732510
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcg 62  Q
    |||||||||||||||||||||||| ||||| || ||| ||||||||||  |||||||||    
T  5732568 acaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcg 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7265654 - 7265593
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcg 62  Q
    ||||||||| ||||||||||||||||| ||||| || ||| ||||||||||  |||||||||    
T  7265654 ccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21395368 - 21395292
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacac 78  Q
    ||||||||| |||||||||||||||| |||||| || ||| |||||| | |  |||||||||||| ||||||||||||    
T  21395368 ccaacaccgctaataatttgagaaaa-tacataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 9195805 - 9195738
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacac 78  Q
    ||||||||||||||||| ||||| || ||| ||||||||||  ||||||||||||  ||||| |||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacac 9195738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31579286 - 31579239
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattat 48  Q
    ||||||||||||||||||||||||||| ||||| || ||| |||||||    
T  31579286 ccaacaccgttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 7723301 - 7723247
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    ||||||||||||||||| | ||| || || ||||||||||| |||||||||||||    
T  7723301 taataatttgagaaaatcatataattcagcataattatatgtatcggtgtcgtgt 7723247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 9025545 - 9025491
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    ||||||||||||||||| ||||| || ||| ||||||||||  ||||||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 9629392 - 9629474
Alignment:
Q  12 aataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    |||||||||||||||| ||||| || | | ||||||||||  |||||||||   | |||||||||||||||  ||||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtcgtgtcggacacaacatgtgtccgacac 9629474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 1532241 - 1532321
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgt 87  Q
    |||||| ||||||||||| ||||||||||| || ||| ||||||||||    ||||||||||| ||||| ||||  ||||||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattatatg---tggtgtcgtgttggtgtcagacatcacacatgt 1532321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 10294110 - 10294195
Alignment:
Q  6 accgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccga 91  Q
    |||| ||||||||||||| |||  |||| || | | ||||||||||  ||||||||||||| ||||||||||| |||  |||||||    
T  10294110 accgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccga 10294195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 10339174 - 10339093
Alignment:
Q  14 taatttgagaaaattacatagttgagtat-aattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    |||||||||||||| ||||| || ||| | |||||||||  || ||| |||||  ||||||||||| |||||||||||||||    
T  10339174 taatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacac 10339093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 32320727 - 32320666
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    |||||||||||||||||| ||||| ||||| || | | | |||||||| |||||||||||||    
T  32320727 acaccgttaataatttgataaaatcacataattcaatgtcattatatgtatcggtgtcgtgt 32320666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7569229 - 7569181
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattata 49  Q
    ||||||| | ||||||||||||||||||||||| || ||| ||||||||    
T  7569229 ccaacacagataataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 26562701 - 26562777
Alignment:
Q  15 aatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccga 91  Q
    ||||||||||||| ||||| || ||| ||||||||||  ||| ||||||||  |||||| ||||  |||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacggcacatgtccga 26562777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34073408 - 34073344
Alignment:
Q  1 ccaacaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgt 65  Q
    |||||| || |||||||||||||||||  |||| || ||| ||||||||||  ||||||||||||    
T  34073408 ccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgt 34073344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 9798 - 9716
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgaca 93  Q
    ||||||||||||||||| || || || ||| ||||||||||  ||||||||||||| ||||| ||||| |||| |||| ||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgaca 9716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 241602 - 241688
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||  ||||| ||||| || ||| |||||||  |  ||||||||||||| ||||||||||| |||| |||||||||||||    
T  241602 taataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgg 241688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 11803260 - 11803350
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    |||| ||||||||||| ||||||| ||||| || ||| ||||||||||  | ||||| ||||| |||| ||| || |||||||||||||||    
T  11803260 acactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacac 11803350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 15816180 - 15816094
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||| ||||| ||||| || ||| |||||||| |  ||||||||||||| ||||||||||| ||||   |||||||||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgg 15816094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 11927144 - 11927076
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtc 72  Q
    |||| ||||||||||||| ||||| ||||| || ||| ||||||||||  ||||||||||||| |||||    
T  11927144 acactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 13844647 - 13844596
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcg 62  Q
    ||||||||||||||||| ||||| |||||| ||||||||||  |||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 25172749 - 25172682
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacac 78  Q
    ||||||||||| ||||||||||| || | | ||||||||||  |||||||||||| | ||||||||||    
T  25172749 taataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggacac 25172682  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 2572107 - 2572021
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||| ||||| ||||| || ||| |||||| | |  ||||||||||||  ||||||||||| |||| ||||||| |||||    
T  2572107 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtccgataccgg 2572021  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 22651984 - 22652070
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    ||||||||||| ||||| ||||| || | |||||||| | |  ||||||||||||  ||||||||||| |||  |||||||||||||    
T  22651984 taataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgg 22652070  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 6065710 - 6065621
Alignment:
Q  9 gttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgga 98  Q
    ||||||||||  | ||||| ||||| |  |||||||||| ||| |||  | |||||| | |||||||||| |||||||||||||||||||    
T  6065710 gttaataattctaaaaaatcacataatacagtataattacatgaatcaatatcgtgtcaatgtcggacacgacacatgtccgacaccgga 6065621  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 8798890 - 8798842
Alignment:
Q  3 aacaccgttaataatttgagaaaattacatagttgagtataattatatg 51  Q
    ||||| ||||||||||||||||||| ||||| || | ||||||||||||    
T  8798890 aacactgttaataatttgagaaaataacataattcaatataattatatg 8798842  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 29776044 - 29776113
Alignment:
Q  11 taataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaaca 82  Q
    ||||||||||||||||| || || || ||||||||||||||  |||||||   || ||||||||||||||||    
T  29776044 taataatttgagaaaatcacgtaattcagtataattatatg--tcggtgttaagtcagtgtcggacacaaca 29776113  T

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Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 3907 - 3818
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgaca 93  Q
    |||| ||||||||||| | ||||| ||||| || ||| |||||| | |  || |||||||||| ||||||||||| ||||||||||||||    
T  3907 acacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgaca 3818  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 53189 - 53274
Alignment:
Q  12 aataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    |||||||||||||||| ||||| || ||| |||||||| |  |||||| |||||  ||||||||||  |||| |||||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgg 53274  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 68299 - 68210
Alignment:
Q  5 caccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtccgacac 94  Q
    ||||||||||||||||||||||| | ||| || |||||||||||| |  || ||||||| |  |||||| |||||||| |||| ||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataattataggtgtcagtgtcgtatcggtgtcgaacacaacatatgttcgacac 68210  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 192307 - 192278
Alignment:
Q  4 acaccgttaataatttgagaaaattacata 33  Q
    ||||||||||||||||||||||||||||||    
T  192307 acaccgttaataatttgagaaaattacata 192278  T

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Target: scaffold1528 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 1036 - 1120
Alignment:
Q  4 acaccgttaataatttgagaaaattacatagttgagtataattatatgcatcggtgtcgtgttagtgtcggacacaacacatgtc 88  Q
    |||||| ||||||||||| ||||||||||| || ||| ||| ||||||  || |||| ||||  |||| |||||||||| |||||    
T  1036 acaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacaaatgtc 1120  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 71779 - 71819
Alignment:
Q  57 gtgtcgtgttagtgtcggacacaacacatgtccgacaccgg 97  Q
    |||||||||  |||||||||||||||| |||||||||||||    
T  71779 gtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgg 71819  T

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