View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21445_low_11 (Length: 298)
Name: NF21445_low_11
Description: NF21445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21445_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 50235016 - 50235293
Alignment:
| Q |
1 |
tttagttctgctgttgaaggctcaaccttcgatgccacgcttgttcaaagcactgaggctgaaccaggcgttgtttcaattctccaggtttcacagccaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50235016 |
tttagttctgctgttgaaggctcaaccttcgatgccacgcttgttcaaagcactgaggctgaaccaggcgttgtttcaattctccaggtttcacagccaa |
50235115 |
T |
|
| Q |
101 |
ttgttaaggttggtgcttcagctccggcaactccagcaacactatcaaaaccagcaacacctgcagctgtgtcaacatccagtgccggtgaggttgcaac |
200 |
Q |
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|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50235116 |
ttgttaaggttggtgcttcagctccagcaactccagcaacactatcaaaaccagcaacacctgcagctgtgtcaacatccagtgccggtgaggttgcaac |
50235215 |
T |
|
| Q |
201 |
accagcagctgtgccaacatccggtgccggtcaggttacaacaccagcagcatcaccttctgtggtgattgctgagtc |
278 |
Q |
| |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50235216 |
accagcagctgtgccagcatccggtgccggtcaggttacaacaccagcagcatcaccttctgtggtgattgctgagtc |
50235293 |
T |
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