View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21449_high_5 (Length: 211)
Name: NF21449_high_5
Description: NF21449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21449_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 37832391 - 37832223
Alignment:
| Q |
21 |
ggtgcaggaaagtgttatggagtgctataatgtaatacaagatatagcgaaggaggagtatgagtccatgtttaatgtgcattcaagttcaggcacaccg |
120 |
Q |
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| T |
37832391 |
ggtgcaggaaagtgttatggagtgctataatgtaatacaagatatagcgaaggaggagtatgagtccatgtttaatgtgcattcaagttcaggcacaccg |
37832292 |
T |
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| Q |
121 |
gttaatgtgttagacgaaaattttctaagcttggaaagtgaaaaaaccaacggaaccaatgttgctcat |
189 |
Q |
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| T |
37832291 |
gttaatgtgttagacgaaaattttctaagcttggaaagtgaaaaaaccaacggaaccaatgttgctcat |
37832223 |
T |
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