View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21451_low_2 (Length: 523)
Name: NF21451_low_2
Description: NF21451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21451_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 12 - 507
Target Start/End: Original strand, 37024596 - 37025088
Alignment:
| Q |
12 |
ataggggataatgaagcaatctgtgcaaactacagattataagcttaactcattggtattgaaccaaacagattatgcaaagatgaatgtgtgaggatac |
111 |
Q |
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| T |
37024596 |
ataggggatcatgaagcaatctgtgcaaactacagattataagcttaactcattggtattgaaccaaacagattatgcaaagatgaatgtgtgaggatac |
37024695 |
T |
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| Q |
112 |
ttgatcaggcaagaggtttctaggatagatcatgttacaaagataaattctgcagcaaataaacatgtaatggaaggagatttatatgaaatacgaacgc |
211 |
Q |
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| T |
37024696 |
ttgatcaggcaagaggtttctaggatagatcatgttacaaagataaattctgcagcaaataaacatgtaatggaaggagatttatatgaaatatgaacgc |
37024795 |
T |
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| Q |
212 |
gacccatttccctcaatcat-tatgtattgttgaatctggatcatcaaggtgctctatcaaaacaatcaacaaaggtagtttctcctttggattattggg |
310 |
Q |
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| T |
37024796 |
gacccatttccctcaatcatatatgtattgttgaatctggatcatcaaggtgctctatcaaaacaatcaacaaaggtagtttctcctttggattattggg |
37024895 |
T |
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| Q |
311 |
ggaagattgcttgttggtataagaacatgaccaacaccaacattggtcatgttgtatatgacatgatgcacccccaaaatattgtgttggtgaaaatttt |
410 |
Q |
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| T |
37024896 |
ggaagattgcttgttggtataagaacatgaccaacaccaacattggtcatgttgtatatgacatgatgcacccccaaaatattgtgttggtgaaaatttt |
37024995 |
T |
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| Q |
411 |
caatgacatttcgtttatcttattaataaacataactaaacgtacgttttcaatattctcatacatatacttgaacttaacaacaaaaagagataaa |
507 |
Q |
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| T |
37024996 |
caatgacatttcgtttatcttattaataaacataactaa----acgttttcaatattctcatacatatacttgaacttaacaacaaaaagagataaa |
37025088 |
T |
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