View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21453_high_12 (Length: 225)

Name: NF21453_high_12
Description: NF21453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21453_high_12
NF21453_high_12
[»] chr1 (43 HSPs)
chr1 (31-222)||(48072071-48072262)
chr1 (27-218)||(39826123-39826314)
chr1 (27-225)||(4907035-4907233)
chr1 (27-225)||(17606415-17606613)
chr1 (27-225)||(43539454-43539652)
chr1 (27-222)||(42510087-42510282)
chr1 (27-225)||(39711179-39711377)
chr1 (27-225)||(33628763-33628961)
chr1 (31-225)||(52058088-52058279)
chr1 (27-225)||(20995776-20995973)
chr1 (27-225)||(24467735-24467932)
chr1 (27-225)||(39970719-39970916)
chr1 (27-225)||(30299338-30299536)
chr1 (27-219)||(29696677-29696863)
chr1 (27-225)||(8292911-8293112)
chr1 (39-219)||(13229845-13230024)
chr1 (27-225)||(18462392-18462589)
chr1 (27-150)||(34749210-34749333)
chr1 (31-164)||(7473869-7474002)
chr1 (27-96)||(39826286-39826351)
chr1 (27-97)||(4907197-4907267)
chr1 (145-225)||(34749297-34749376)
chr1 (27-66)||(24467701-24467740)
chr1 (27-66)||(33628956-33628995)
chr1 (27-93)||(17606381-17606447)
chr1 (88-191)||(215046-215149)
chr1 (27-66)||(18462358-18462397)
chr1 (27-97)||(34749340-34749410)
chr1 (31-66)||(52058274-52058309)
chr1 (27-97)||(8292877-8292947)
chr1 (27-65)||(30299304-30299342)
chr1 (27-97)||(39711145-39711215)
chr1 (27-97)||(43539420-43539490)
chr1 (113-149)||(17501993-17502029)
chr1 (32-76)||(42510166-42510210)
chr1 (27-66)||(39970911-39970950)
chr1 (33-66)||(34749299-34749332)
chr1 (33-66)||(48072144-48072177)
chr1 (145-205)||(16294138-16294198)
chr1 (113-149)||(18462364-18462400)
chr1 (109-149)||(24467886-24467926)
chr1 (109-149)||(42510093-42510133)
chr1 (109-149)||(52058090-52058130)
[»] chr4 (49 HSPs)
chr4 (31-225)||(15640822-15641016)
chr4 (27-225)||(9396806-9397004)
chr4 (27-225)||(9516683-9516881)
chr4 (29-225)||(3018119-3018315)
chr4 (37-225)||(13132024-13132212)
chr4 (27-222)||(46046497-46046692)
chr4 (27-225)||(34064055-34064253)
chr4 (27-225)||(37012780-37012978)
chr4 (27-225)||(4355988-4356186)
chr4 (27-225)||(38574041-38574239)
chr4 (27-225)||(7819121-7819319)
chr4 (27-225)||(48579939-48580137)
chr4 (27-225)||(9619087-9619284)
chr4 (27-225)||(18667396-18667594)
chr4 (27-225)||(18713067-18713265)
chr4 (27-225)||(31090134-31090332)
chr4 (27-225)||(3273729-3273925)
chr4 (27-225)||(31944057-31944255)
chr4 (27-149)||(26252419-26252542)
chr4 (27-182)||(48259901-48260056)
chr4 (23-137)||(35376322-35376437)
chr4 (145-225)||(26252375-26252455)
chr4 (27-96)||(7819087-7819156)
chr4 (27-96)||(46046660-46046729)
chr4 (27-97)||(37012942-37013012)
chr4 (27-97)||(3018085-3018155)
chr4 (27-96)||(38574204-38574273)
chr4 (27-66)||(9619053-9619092)
chr4 (27-66)||(26252341-26252380)
chr4 (27-97)||(4355954-4356024)
chr4 (27-97)||(18713033-18713103)
chr4 (27-97)||(34064217-34064287)
chr4 (27-66)||(3273695-3273734)
chr4 (27-66)||(9516876-9516915)
chr4 (27-66)||(31090327-31090366)
chr4 (27-97)||(9396772-9396842)
chr4 (27-65)||(31944023-31944061)
chr4 (27-97)||(48580101-48580171)
chr4 (113-149)||(36888943-36888979)
chr4 (113-149)||(43312288-43312324)
chr4 (31-66)||(13132207-13132242)
chr4 (27-66)||(15640788-15640827)
chr4 (27-97)||(35376235-35376305)
chr4 (170-225)||(41947072-41947127)
chr4 (23-66)||(43312278-43312321)
chr4 (32-66)||(9516772-9516806)
chr4 (27-65)||(12904819-12904857)
chr4 (145-225)||(35376269-35376346)
chr4 (32-73)||(31090216-31090257)
[»] chr5 (43 HSPs)
chr5 (31-225)||(6817199-6817392)
chr5 (31-223)||(20709289-20709481)
chr5 (27-225)||(7125990-7126188)
chr5 (27-225)||(29444913-29445111)
chr5 (27-225)||(41001426-41001624)
chr5 (27-222)||(4919063-4919258)
chr5 (27-222)||(24650773-24650967)
chr5 (27-222)||(31799713-31799908)
chr5 (27-225)||(17762389-17762587)
chr5 (27-222)||(24837242-24837437)
chr5 (27-225)||(993820-994017)
chr5 (27-225)||(14144008-14144206)
chr5 (27-225)||(24074410-24074607)
chr5 (27-192)||(23979042-23979206)
chr5 (27-222)||(18336578-18336761)
chr5 (27-149)||(14411848-14411971)
chr5 (23-149)||(27159059-27159184)
chr5 (145-225)||(14411804-14411884)
chr5 (145-225)||(27159148-27159228)
chr5 (36-222)||(22571159-22571345)
chr5 (27-124)||(30512360-30512458)
chr5 (27-124)||(30552700-30552798)
chr5 (27-97)||(7126152-7126222)
chr5 (27-97)||(14143974-14144044)
chr5 (27-97)||(17762355-17762425)
chr5 (27-93)||(20959330-20959396)
chr5 (27-97)||(24074376-24074446)
chr5 (109-146)||(20947016-20947053)
chr5 (27-66)||(994012-994051)
chr5 (27-66)||(41001619-41001658)
chr5 (27-65)||(6817388-6817426)
chr5 (27-97)||(14411770-14411840)
chr5 (27-62)||(4919260-4919295)
chr5 (27-62)||(18336541-18336576)
chr5 (32-66)||(18336638-18336672)
chr5 (27-97)||(20709447-20709517)
chr5 (27-97)||(24650934-24651004)
chr5 (27-97)||(27159192-27159262)
chr5 (31-97)||(29444883-29444949)
chr5 (27-97)||(31799875-31799945)
chr5 (31-93)||(41424593-41424655)
chr5 (109-150)||(41425710-41425751)
chr5 (109-149)||(41424595-41424635)
[»] chr3 (51 HSPs)
chr3 (27-223)||(14262109-14262305)
chr3 (23-225)||(45970022-45970224)
chr3 (27-225)||(14161978-14162176)
chr3 (27-225)||(21633003-21633201)
chr3 (27-225)||(35995751-35995949)
chr3 (27-223)||(15328569-15328765)
chr3 (27-225)||(5800712-5800910)
chr3 (27-225)||(14171659-14171857)
chr3 (27-225)||(19112838-19113036)
chr3 (27-225)||(9267048-9267246)
chr3 (27-225)||(16722098-16722296)
chr3 (27-225)||(30500114-30500312)
chr3 (27-225)||(52552765-52552959)
chr3 (27-222)||(38283660-38283855)
chr3 (27-225)||(33372513-33372709)
chr3 (31-225)||(43572496-43572692)
chr3 (27-223)||(45003605-45003801)
chr3 (37-225)||(49986635-49986823)
chr3 (31-222)||(4204785-4204976)
chr3 (27-225)||(20853769-20853967)
chr3 (35-225)||(17465449-17465638)
chr3 (37-225)||(47575356-47575543)
chr3 (119-225)||(11003839-11003945)
chr3 (27-96)||(14171822-14171891)
chr3 (27-96)||(33372479-33372548)
chr3 (27-66)||(20853962-20854001)
chr3 (27-66)||(43572462-43572501)
chr3 (31-97)||(14161948-14162014)
chr3 (27-97)||(30500276-30500346)
chr3 (27-97)||(52552923-52552993)
chr3 (27-66)||(11003805-11003844)
chr3 (27-66)||(16722064-16722103)
chr3 (27-66)||(45003569-45003608)
chr3 (31-97)||(5800682-5800748)
chr3 (27-97)||(14262271-14262341)
chr3 (27-65)||(45969988-45970026)
chr3 (27-65)||(49986601-49986639)
chr3 (26-66)||(1068915-1068955)
chr3 (30-66)||(21632972-21633008)
chr3 (113-149)||(32998397-32998433)
chr3 (27-66)||(9267241-9267280)
chr3 (23-66)||(17465633-17465676)
chr3 (170-225)||(17649226-17649281)
chr3 (27-66)||(19113031-19113070)
chr3 (27-97)||(47575507-47575577)
chr3 (32-66)||(16722173-16722207)
chr3 (27-65)||(17649277-17649315)
chr3 (32-66)||(49986710-49986744)
chr3 (29-66)||(35995944-35995981)
chr3 (109-149)||(4204787-4204827)
chr3 (109-149)||(43572650-43572690)
[»] chr2 (38 HSPs)
chr2 (27-225)||(23806059-23806257)
chr2 (27-225)||(26560627-26560825)
chr2 (27-225)||(15106174-15106372)
chr2 (31-225)||(19251577-19251771)
chr2 (27-225)||(22263264-22263462)
chr2 (27-225)||(42670792-42670990)
chr2 (32-225)||(39878209-39878402)
chr2 (27-225)||(20498852-20499050)
chr2 (27-225)||(17463198-17463396)
chr2 (88-225)||(23854800-23854937)
chr2 (27-225)||(17850659-17850857)
chr2 (30-225)||(13284484-13284679)
chr2 (27-225)||(26135924-26136122)
chr2 (27-205)||(33290176-33290354)
chr2 (27-149)||(30390532-30390654)
chr2 (27-149)||(26236278-26236400)
chr2 (35-130)||(13254638-13254733)
chr2 (145-225)||(26236234-26236313)
chr2 (27-96)||(17850822-17850891)
chr2 (27-97)||(22263426-22263496)
chr2 (27-97)||(26236200-26236270)
chr2 (27-96)||(15106140-15106209)
chr2 (27-66)||(19251543-19251582)
chr2 (27-66)||(26135890-26135929)
chr2 (27-81)||(13284659-13284713)
chr2 (27-97)||(17463164-17463234)
chr2 (27-97)||(23806025-23806095)
chr2 (27-97)||(23854901-23854971)
chr2 (36-97)||(39878184-39878245)
chr2 (31-97)||(42670954-42671020)
chr2 (27-63)||(23854761-23854797)
chr2 (110-149)||(26236355-26236394)
chr2 (27-97)||(26560789-26560859)
chr2 (27-64)||(13254570-13254607)
chr2 (31-60)||(23046784-23046813)
chr2 (31-60)||(44098894-44098923)
chr2 (109-149)||(13284487-13284527)
chr2 (109-145)||(13284667-13284703)
[»] chr8 (35 HSPs)
chr8 (27-225)||(10108477-10108675)
chr8 (36-225)||(17622969-17623158)
chr8 (27-220)||(26136797-26136990)
chr8 (23-222)||(2583430-2583629)
chr8 (29-216)||(22494500-22494687)
chr8 (23-225)||(7689630-7689832)
chr8 (27-223)||(14767580-14767776)
chr8 (27-223)||(21148010-21148205)
chr8 (27-223)||(43851737-43851933)
chr8 (27-225)||(42605860-42606058)
chr8 (27-225)||(14820401-14820599)
chr8 (27-225)||(30789580-30789778)
chr8 (31-222)||(42113061-42113252)
chr8 (27-225)||(5554976-5555174)
chr8 (27-191)||(26532856-26533020)
chr8 (46-218)||(43481406-43481578)
chr8 (27-96)||(30789743-30789812)
chr8 (27-97)||(10108443-10108513)
chr8 (27-97)||(14820367-14820437)
chr8 (23-97)||(43481549-43481623)
chr8 (35-158)||(22848399-22848522)
chr8 (29-96)||(7689598-7689665)
chr8 (27-97)||(17623122-17623192)
chr8 (27-97)||(2583393-2583463)
chr8 (27-97)||(5554942-5555012)
chr8 (27-66)||(10171409-10171448)
chr8 (170-205)||(21144721-21144756)
chr8 (27-66)||(42605826-42605865)
chr8 (32-66)||(17623049-17623083)
chr8 (27-97)||(21144740-21144810)
chr8 (27-97)||(21148171-21148241)
chr8 (27-97)||(22494458-22494527)
chr8 (27-60)||(38726760-38726793)
chr8 (109-145)||(21144764-21144800)
chr8 (28-96)||(43851900-43851968)
[»] chr7 (42 HSPs)
chr7 (27-225)||(12006613-12006811)
chr7 (27-225)||(23704768-23704966)
chr7 (27-225)||(41600031-41600229)
chr7 (27-225)||(20458764-20458962)
chr7 (27-225)||(20419609-20419807)
chr7 (27-225)||(38879797-38879995)
chr7 (27-225)||(44816908-44817106)
chr7 (37-225)||(31851322-31851510)
chr7 (27-225)||(23383573-23383771)
chr7 (27-225)||(48672352-48672550)
chr7 (27-220)||(20963568-20963761)
chr7 (27-223)||(10409483-10409679)
chr7 (23-225)||(1250275-1250477)
chr7 (31-225)||(7658048-7658240)
chr7 (37-222)||(33162645-33162830)
chr7 (27-225)||(28218252-28218434)
chr7 (109-225)||(6465961-6466077)
chr7 (27-182)||(24194941-24195101)
chr7 (27-145)||(25772436-25772554)
chr7 (27-149)||(48648334-48648456)
chr7 (27-96)||(12006776-12006845)
chr7 (27-96)||(16995272-16995341)
chr7 (27-96)||(41600194-41600263)
chr7 (27-96)||(48672515-48672584)
chr7 (159-225)||(48648434-48648500)
chr7 (27-96)||(28218399-28218468)
chr7 (27-97)||(7658204-7658274)
chr7 (27-97)||(38879959-38880029)
chr7 (145-225)||(25772523-25772602)
chr7 (27-66)||(23704734-23704773)
chr7 (27-66)||(20419802-20419841)
chr7 (27-66)||(20458957-20458996)
chr7 (27-66)||(25772597-25772636)
chr7 (27-97)||(1250441-1250511)
chr7 (27-69)||(20963757-20963799)
chr7 (27-65)||(31851506-31851544)
chr7 (37-97)||(6465937-6465997)
chr7 (27-66)||(23383766-23383805)
chr7 (32-66)||(23704843-23704877)
chr7 (27-96)||(10409447-10409516)
chr7 (113-149)||(7842518-7842554)
chr7 (27-66)||(24194936-24194976)
[»] scaffold0361 (3 HSPs)
scaffold0361 (27-225)||(4670-4868)
scaffold0361 (23-66)||(4632-4675)
scaffold0361 (32-66)||(4745-4779)
[»] scaffold0141 (1 HSPs)
scaffold0141 (27-225)||(8430-8627)
[»] chr6 (31 HSPs)
chr6 (27-225)||(9481289-9481487)
chr6 (27-225)||(24732045-24732243)
chr6 (27-225)||(30618069-30618266)
chr6 (27-201)||(33714560-33714734)
chr6 (27-198)||(26385351-26385521)
chr6 (33-225)||(10321809-10322002)
chr6 (31-225)||(30458978-30459172)
chr6 (32-222)||(2299389-2299577)
chr6 (27-182)||(18500387-18500543)
chr6 (81-215)||(3229990-3230124)
chr6 (27-205)||(14680955-14681133)
chr6 (37-150)||(32017619-32017732)
chr6 (29-149)||(33637710-33637831)
chr6 (27-101)||(9854118-9854192)
chr6 (145-225)||(32017696-32017775)
chr6 (145-225)||(33637666-33637746)
chr6 (114-191)||(17142798-17142875)
chr6 (23-97)||(10321966-10322040)
chr6 (114-225)||(18500506-18500618)
chr6 (27-66)||(19284202-19284241)
chr6 (27-66)||(24732011-24732050)
chr6 (27-66)||(32017770-32017809)
chr6 (27-61)||(2299580-2299614)
chr6 (31-97)||(9481259-9481325)
chr6 (27-97)||(30618035-30618105)
chr6 (27-64)||(9154953-9154990)
chr6 (31-65)||(17142754-17142788)
chr6 (32-66)||(17142800-17142834)
chr6 (32-66)||(26385440-26385474)
chr6 (27-97)||(33637632-33637702)
chr6 (37-97)||(30459136-30459196)
[»] scaffold0809 (2 HSPs)
scaffold0809 (31-225)||(1517-1711)
scaffold0809 (31-97)||(1487-1553)
[»] scaffold0185 (2 HSPs)
scaffold0185 (31-225)||(3946-4140)
scaffold0185 (37-97)||(4104-4164)
[»] scaffold0881 (1 HSPs)
scaffold0881 (39-219)||(305-484)
[»] scaffold0477 (1 HSPs)
scaffold0477 (27-145)||(4934-5053)
[»] scaffold0449 (3 HSPs)
scaffold0449 (27-150)||(7299-7427)
scaffold0449 (27-65)||(7466-7504)
scaffold0449 (145-218)||(7390-7463)
[»] scaffold0176 (2 HSPs)
scaffold0176 (118-225)||(15797-15903)
scaffold0176 (27-97)||(15867-15937)
[»] scaffold0117 (1 HSPs)
scaffold0117 (27-98)||(12216-12287)
[»] scaffold0352 (1 HSPs)
scaffold0352 (31-66)||(4744-4779)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 31 - 222
Target Start/End: Complemental strand, 48072262 - 48072071
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttgg-tcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatgga 129  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||| ||||||||||||||  |||||||||||||||| |||| ||||    
T  48072262 tgtccctgtaatttcatattcttccacttttgggtcctc-atttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaagtgga 48072164  T
Q  130 ggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48072163 ggaatctgaaattacagggatcaaaagtgggaggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 48072071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 27 - 218
Target Start/End: Original strand, 39826123 - 39826314
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||||| ||||||||||||||  |||||||||||||||  |||| |    
T  39826123 attttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt 39826222  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaagga 218  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| ||| |||||| ||||||||||||    
T  39826223 ggaggaatatgaaattacagggatcaaaagtgggaggaatctaaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaagga 39826314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 4907035 - 4907233
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||  ||||||||||||||  | ||||||||||||||||||| |    
T  4907035 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaaaagt 4907134  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||| ||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  4907135 ggatgaatctgaaattacagggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaaggagggacca 4907233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 17606613 - 17606415
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| ||||||||||||||||||||||||||||||   ||| |||||||| |||||||| ||||||||||  |||||||||||||||| |||| |    
T  17606613 attttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagt 17606514  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||||||||| || |||||||||| ||||||||| |||||||||    
T  17606513 ggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatacagattctgctgacgtgatgaaatgagggacca 17606415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 43539652 - 43539454
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| ||||||||| |||||||||   ||| |||||||| |||  ||||||||||||||| ||||||||||||| || |||| |    
T  43539652 attttgtccatgtaatttcaaattcttccagttttggtcccttattccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaagt 43539553  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  43539552 ggaggaatttgaaattacagggagcaaaagtgggaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 43539454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 42510087 - 42510282
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||| ||||  ||||||||||| | |||| ||||||||||||||  |||| ||||||||||| |||| |    
T  42510087 attttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacatcagcagaatctgcatacatggcacgtgaaatgagggaccaaaagt 42510186  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||||||  |||||||||||| |||||||||| ||||||||| ||||||    
T  42510187 ggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggggtgtaatttatgcagattctgctgacgtgatgaaatgaggga 42510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 39711377 - 39711179
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||| ||||||||| |||||||||||||||||||  |||| |||||||| |||| ||| ||||||||||  |||||||||||||||| |||| |    
T  39711377 attttgtccccgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaagt 39711278  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||| ||||||||||||| |||||| ||||||||| | |||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||    
T  39711277 ggaggaatccgaaattacagggaccaaaagcgggaggaatatgaaattacaaggacgtaatttatgcagattctgctgacgtgattaaaggagggacca 39711179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 33628763 - 33628961
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||| |||||||||||||||| ||||||||||||  |||| |||||| | |||| ||| ||||||||||  |||||||||||||||| |||| |    
T  33628763 attttgtccccgtaatttcagattctttcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaaaagt 33628862  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
     |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||| | |||||||||| ||||| |||||||||||||    
T  33628863 agaggaatctgaaattacagggaccaaaagcgggaggaatttgaaattacagggacataatttatgtagattctgctgacgtgattaaaggagggacca 33628961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 52058088 - 52058279
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| | |||| ||||||||||||||| |||||||||||||||| |||| |||||    
T  52058088 tgtccctgtaatttcagattcttccacttttggtccctcatttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggag 52058187  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
     ||| |||||||||| ||| |||||||||||||||| | |||| | |||||||||||||||||| |||   |||| |||||||||||||||||||    
T  52058188 taatatgaaattacaaggaccaaaagtgggaggaatctgaaatcatagggacgtaatttatgcagatt---ctgacgtgatgaaaggagggacca 52058279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 20995973 - 20995776
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| ||||||||||| |||||||||||||||||||   ||| |||||||| |||| ||||||||||||||  ||||||| |||||||| |||| |    
T  20995973 attttgtctctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaa-tgagggaccaaaagt 20995875  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| ||| ||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  20995874 ggagaaatttgaaattacagggacgaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggacca 20995776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 24467932 - 24467735
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| || | ||||||||||||||  ||||||||||| |||| |||  |    
T  24467932 attttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaaatgt 24467834  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| |||||||||||||||||| |||||||||||||||| | ||||||||  ||||||||||||||| |||||  |||  ||||||||||||||||||    
T  24467833 ggagtaatctgaaattacagggaccaaaagtgggaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggacca 24467735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 39970719 - 39970916
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||  ||||||||||||||||||||||||||||||  |||| |||||||| |||||||||||||||||||  |||||||||||||||| |||| |    
T  39970719 attttgtctatgtaatttcagattcttccacttttggtccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaagt 39970818  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||| |||||||||||||||  || |||||||||||||||| ||||||| |||||||  |||||||||  |||||||||| |||||||||| ||||||||    
T  39970819 ggatgaatctgaaattaca-tgaccaaaagtgggaggaatctaaaatttcagggacacaatttatgcggattctgctgacgtgatgaaagaagggacca 39970916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 30299536 - 30299338
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||| |||||||||||||||||||||  |||| |||||||| || | ||||||||||||||  || ||||||||||||| |||| |    
T  30299536 attttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagt 30299437  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| | |  ||||||||||||||| | ||||||||||||||||||||||| | |||||| |||  |||||||||||| |||||    
T  30299436 ggaggaatctgaaattacaagaactaaaagtgggaggaatctgaaattacagggacgtaatttatggagattctgttgacttgatgaaaggagagacca 30299338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 29696863 - 29696677
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||||| ||     ||||||||||||||| |||| |    
T  29696863 attttgtccatgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatgca-----cgtaaaatgagggaccaaaagt 29696769  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggag 219  Q
    |||||||||||||| |||||||| |||| ||||||||||| | |||||| |||||| ||||||||||| ||||||| ||||||||||||||||    
T  29696768 ggaggaatctgaaaatacagggaccaaa-gtgggaggaatatgaaattatagggacataatttatgcagattctgccgatgtgatgaaaggag 29696677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 8293112 - 8292911
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaa---a 123  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| ||||| || |||  ||||||||||||||  | | |||||||||||||||   |    
T  8293112 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggactaattaa 8293013  T
Q  124 aatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    | ||||||||||| |||||||| ||| ||||||| |||||||| | ||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||    
T  8293012 agtggaggaatctaaaattacatggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaagaggaac 8292913  T
Q  224 ca 225  Q
    ||    
T  8292912 ca 8292911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 219
Target Start/End: Complemental strand, 13230024 - 13229845
Alignment:
Q  39 taatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatctga 138  Q
    ||||||||  ||||||||||||||||||  |||| |||||||| |||| ||||||||||||||| ||| |||||||||||| |||| |||||||||||||    
T  13230024 taatttcatcttcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaagtggaggaatctga 13229925  T
Q  139 aattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggag 219  Q
    ||||||| ||| |||||||| ||||||| | ||||||||||||||||||||||||| ||| || |||  ||||||||||||    
T  13229924 aattaca-ggaccaaaagtgagaggaatctgaaattacagggacgtaatttatgcagattatgttgacttgatgaaaggag 13229845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 18462589 - 18462392
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||| ||||||||||||||||||||||||||||   ||||||||||||| | || ||||||||||||||  ||| ||||||| |||| |||  |    
T  18462589 attttgtccccgtaatttcagattcttccacttttggtctctcatttcaccacgtcaacagaatctgcatacatggcacgcaaaatga-ggaccaaacgt 18462491  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| ||| |||||||| ||||| |||||||||||||||| | ||||||||  ||||||||||||||| |||||  |||  ||||||||||||||||||    
T  18462490 ggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggacca 18462392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 34749210 - 34749333
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||| ||||||||| |||||||||||||||||||  |||| |||||||| |||| ||| ||||||||||  | |||||||||||||| |||| |    
T  34749210 attttgtccccgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaagt 34749309  T
Q  127 ggaggaatctgaaattacagggat 150  Q
    ||||||||||||||||||||||||    
T  34749310 ggaggaatctgaaattacagggat 34749333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 7473869 - 7474002
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    |||| ||||||||||| |||||||||||||||||||  ||||||||||||| |  | ||||||||||||||  |||| |||||| |||  |||| |||||    
T  7473869 tgtctctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaaagtggag 7473968  T
Q  131 gaatctgaaattacagggatcaaaagtgggagga 164  Q
    ||||||||||||||| ||| ||||||||||||||    
T  7473969 gaatctgaaattacaaggaccaaaagtgggagga 7474002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 39826351 - 39826286
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||    ||||| ||||| ||||||||||||||    
T  39826351 attttgtccctgtaatttcagattcttccacttttggtcc----tttcatcacgtcagcaaaatctgcat 39826286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 4907267 - 4907197
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||| ||||| || | ||||||||||    
T  4907267 attttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagtagaatctgcata 4907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 34749297 - 34749376
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||| ||||||||| |||||| | |||||||||||| |||||||||||| |||||||||| ||||| |||||||| ||||    
T  34749297 agggaccaaaagtgg-aggaatctgaaattacagggatgtaatttatgcagattctgctgacgtgattaaaggaggtacca 34749376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 24467701 - 24467740
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24467701 attttgtccctgtaatttcagattcttccacttttggtcc 24467740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 33628995 - 33628956
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33628995 attttgtccctgtaatttcagattcttccacttttggtcc 33628956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 17606381 - 17606447
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctg 93  Q
    ||||||| |||||||||||| |||||||||||||||||||  ||||||| ||||| |||| ||||||    
T  17606381 attttgttcctgtaatttcatattcttccacttttggtccctcatttcatcacgtcagcagaatctg 17606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 191
Target Start/End: Original strand, 215046 - 215149
Alignment:
Q  88 aatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaat 187  Q
    |||||||||| |||| |||| ||||||  ||| |||| ||||||||||| |||||||| ||| | |||||| ||| ||| | ||||||||  ||||||||    
T  215046 aatctgcatatatgacacgtgaaatgaatgaccaaaagtggaggaatcttaaattacacggaccgaaagtgagagaaatctgaaattacaatgacgtaat 215145  T
Q  188 ttat 191  Q
    ||||    
T  215146 ttat 215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 18462358 - 18462397
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  18462358 attttgtccctgtaatttcagattcttccatttttggtcc 18462397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 34749410 - 34749340
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggt-cctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| ||| | ||||| |||| ||||||||||    
T  34749410 attttatccctgtaatttcagattcttccacttttggtacctcc-tttaatcacgtcagcagaatctgcata 34749340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 52058309 - 52058274
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||    
T  52058309 tgtccctgtaatttcagattcttccacttttggtcc 52058274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 8292877 - 8292947
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||| ||||||| ||||||||||||||||| |  | ||||| ||||| |||| ||||||||||    
T  8292877 attttgtccctgaaatttcatattcttccacttttggttcctcttttcatcacgtcagcagaatctgcata 8292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 30299304 - 30299342
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30299304 attttgtccctgtaatttcatattcttccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 39711145 - 39711215
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||| |||||||||| |||||||||||||||||||  | ||| | ||||| |||| ||||||||||    
T  39711145 attttgtccttgtaatttcatattcttccacttttggtccctcctttaatcacgtcagcagaatctgcata 39711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 43539420 - 43539490
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||| | ||| |||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  43539420 attttgtccctgtaattttatattgttccacttttggtccctcctttcatcacgtcagcagaatctgcata 43539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 17501993 - 17502029
Alignment:
Q  113 gagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17501993 gagggactaaaagtggaggaatctgaaattacaggga 17502029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 42510210 - 42510166
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcctccatttcac 76  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||    
T  42510210 gtccctgtaatttcagattcctccacttttggtccctcatttcac 42510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 39970950 - 39970911
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  39970950 attttgtccctgtaattttagatccttccacttttggtcc 39970911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 34749332 - 34749299
Alignment:
Q  33 tccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||| ||||||||||||||    
T  34749332 tccctgtaatttcagattcctccacttttggtcc 34749299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 48072144 - 48072177
Alignment:
Q  33 tccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||| ||||||||||||||    
T  48072144 tccctgtaatttcagattcctccacttttggtcc 48072177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 16294138 - 16294198
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctga 205  Q
    ||||| |||||||||  |||||   ||||||||||||||||||||||| | ||||||||||    
T  16294138 agggaccaaaagtggatggaatcataaattacagggacgtaatttatgtagattctgctga 16294198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 18462400 - 18462364
Alignment:
Q  113 gagggactaaaaatggaggaatctgaaattacaggga 149  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  18462400 gagggaccaaaaatggaagaatctgaaattacaggga 18462364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 24467886 - 24467926
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacaggga 149  Q
    ||||||||||| |||| |||| |||||||||||||||||||    
T  24467886 aaatgagggaccaaaagtggaagaatctgaaattacaggga 24467926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 42510133 - 42510093
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||||||||||||||| |||| |||| ||||||||||||||    
T  42510133 aaatgagggactaaaagtggaagaatatgaaattacaggga 42510093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 52058130 - 52058090
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacaggga 149  Q
    ||||||||||| |||| |||| |||||||||||||||||||    
T  52058130 aaatgagggaccaaaagtggaagaatctgaaattacaggga 52058090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 31 - 225
Target Start/End: Complemental strand, 15641016 - 15640822
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||| |||| ||| ||||||||||| ||||||||||| |||| |||| |||||    
T  15641016 tgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggaccaaaagtggag 15640917  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15640916 gaatctgaaattacaaggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 15640822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 9397004 - 9396806
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||| || ||||| |||| ||||||||||||||| |||||||||||||||| |||| |    
T  9397004 attttgtccctgtaatttcagattcttccacttttggaccatcattccaacacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt 9396905  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9396904 ggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 9396806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 9516683 - 9516881
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||| |    
T  9516683 attttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagt 9516782  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||| | ||| || |||  ||||||||||||||||||    
T  9516783 ggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgtagattttgttgacttgatgaaaggagggacca 9516881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 29 - 225
Target Start/End: Complemental strand, 3018315 - 3018119
Alignment:
Q  29 tttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatgg 128  Q
    ||||||| |||||||||||||||| |||||||||||||   ||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||| |||    
T  3018315 tttgtccgtgtaatttcagattctaccacttttggtcccttattccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtgg 3018216  T
Q  129 aggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||| |||||||| ||||| |||||||||||||||| | |||||||| || ||||||||||||| |||||||||| |||||||||||||||||||    
T  3018215 aggaatttgaaattatagggaccaaaagtgggaggaatgtgaaattacaaggccgtaatttatgcagattctgctgacgtgatgaaaggagggacca 3018119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 37 - 225
Target Start/End: Original strand, 13132024 - 13132212
Alignment:
Q  37 tgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatct 136  Q
    |||||||||||||||||||||||||| |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||| |||||| ||||| |||||    
T  13132024 tgtaatttcagattcttccacttttgatccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtggagtaatct 13132123  T
Q  137 gaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||| ||| |||||||||||| ||| | |||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  13132124 gaaattacatggaccaaaagtgggagaaatatgaaattacaaggacgtaatttatgcagattctgctgatttgatgaaagaagggacca 13132212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 46046497 - 46046692
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| ||||||||||||||| |||  |||| ||||||||||| | ||||||||||||||  |||||||||||||||  |||| |    
T  46046497 attttgtccctgtaatttcatattcttccacttttgatccctcattccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaaagt 46046596  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||| ||||| ||| |||||| ||||||||||||||||    
T  46046597 ggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggaggga 46046692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 34064055 - 34064253
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| |||||||||||||||||||||||||||||||  |||| |||||| | |||  ||||| ||||||||  | ||||||||||||||||||| |    
T  34064055 attttgtctctgtaatttcagattcttccacttttggtccctcattccaccacatcagccgaatctacatacatggcatgtaaaatgagggactaaaagt 34064154  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| ||||||| |||||||| | |||||||| |||||||||||||||| |||||||||| |||||||||| ||||||||    
T  34064155 ggaggaatctgaaattacagggaccaaaagtaggaggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaagaagggacca 34064253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 37012780 - 37012978
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  37012780 attttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 37012879  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||| ||| ||||||| ||| |||| | ||||||||||||||||||||||||| ||| |||||| ||||||||||||| |||||    
T  37012880 ggaggaatttgaaattacaaggaccaaaagtaggaagaatatgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagtgacca 37012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 4356186 - 4355988
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| ||||||||||| |||||||||||||||||||   ||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||| |    
T  4356186 attttgtctctgtaatttcaaattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt 4356087  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||| ||| ||||||| |||||||| | |||||||| |||||||||||||||| |||||||| | ||||||||| |||||||||    
T  4356086 ggaggaatttgaaattacaaggaccaaaagtaggaggaatctgaaattacaaggacgtaatttatgcagattctgctaacgtgatgaaatgagggacca 4355988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 38574041 - 38574239
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  | |||||||||||||| |||| |    
T  38574041 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaagt 38574140  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| ||||||||||| || |||||||||||||||| | |||||||||||||| |||| ||||| ||| || ||| |||||||||||||||||||    
T  38574141 ggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaattacagggacgcaattgatgcagattttgttgacgtgatgaaaggagggacca 38574239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 7819319 - 7819121
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||| |||||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  7819319 attttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 7819220  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||| ||| |||||||||||||||| | |||||||| |||||||||| ||||| ||| | || | |||||||||||||| ||||    
T  7819219 ggaggaatatgaaattacatggaccaaaagtgggaggaatctgaaattacatggacgtaattgatgcagattttactaacgtgatgaaaggaggaacca 7819121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 48579939 - 48580137
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| |||||||||||||||||| || |||||||||   ||| |||||||| |||| ||||| ||||||||  |||||||||||||||  |||| |    
T  48579939 attttgtctctgtaatttcagattctttcaattttggtcccttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggagcaaaagt 48580038  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||| || || |||||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  48580039 ggaggaatttgaaattagagagaccaaaagtgggaggaatttgaaattacaaggacgtaatttatgcatattctgctaaggtgatgaaaggagggacca 48580137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 9619284 - 9619087
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||| |||||||| |||| |||||| |||| ||  |||||||| ||||||  |||| |    
T  9619284 attttgtccttgtaatttcatattcttccacttttggtccttcattccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaagt 9619185  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| ||||| |||||||||| | ||||||||||||||| ||||||||| |||||| |||  ||||||||||||||||||    
T  9619184 ggaggaatctgaaattacagggaccaaaaatgggaggaatatgaaattacagggacgt-atttatgcagattctgttgacttgatgaaaggagggacca 9619087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 18667594 - 18667396
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||| ||||||||||||||||||||||| |||| ||||   ||| |||||||| || | ||||||||||||||  |||||||||||||||| |||| |    
T  18667594 attttgaccctgtaatttcagattcttccagtttttgtcccttattccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaagt 18667495  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| | |||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||| ||| || ||| |||||||||||||||||||    
T  18667494 ggaggaatttaaaattacagggaccaaaagttggaggaatctgaaattacagggacgtaatttatgcagattttgttgacgtgatgaaaggagggacca 18667396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 18713265 - 18713067
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| ||||||||||||||||||||| |||||||||   ||| |||||||| |||| ||||| |||||||  |||||||| |||||||| |||| |    
T  18713265 attttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtcagcagaatctacatacattgaacgtaaactgagggaccaaaagt 18713166  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
     ||||||| |||||||||| ||| |||||| ||||||||| | ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  18713165 tgaggaatttgaaattacatggaccaaaagagggaggaatctgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagggacca 18713067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 31090134 - 31090332
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||| ||| ||||||||||  ||||||||||| |||| |||| |    
T  31090134 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaagt 31090233  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||||||||||| |||| |||||||||||| ||| | |||||||| |||||||||||||| | |||||  |||  ||||||||||||||||||    
T  31090234 ggaggaatctgaaattacggggaccaaaagtgggagaaatctgaaattacaaggacgtaatttatgtagattctattgacttgatgaaaggagggacca 31090332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 3273925 - 3273729
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||||| || | ||||||||||||||  ||||||||||| |||| |||  |    
T  3273925 attttatccctgtaatttcagattcttccacttttgatccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaaacgt 3273827  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| |||||||||||||| ||| |||||||||||||||| | |||||||| |||||||||||||||| |||||  |||  ||||||||||||||||||    
T  3273826 ggagtaatctgaaattaca-ggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattctaatgacttgatgaaaggagggacca 3273729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 31944255 - 31944057
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||| ||||  |||| |||||||| | || ||||||||||| ||  |||||||||||||||| |||| |    
T  31944255 attttgtccatgtaatttcatattcttccactttttgtccctcattccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaagt 31944156  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| ||| |||||||||||||||| | |||||||| |||| ||||| |||||  || || ||| ||||||||||||| |||||    
T  31944155 ggaggaatctgaaattacatggaccaaaagtgggaggaatctgaaattacatggacataattgatgcaggttttgttgacgtgatgaaaggagagacca 31944057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 26252542 - 26252419
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  26252542 attttgtccctgtaatttcatattcttccacttttggtcccccattccactacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 26252443  T
Q  127 -ggaggaatctgaaattacaggga 149  Q
     |||||||||||||||||||||||    
T  26252442 gggaggaatctgaaattacaggga 26252419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 48260056 - 48259901
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| ||||||||||||||| ||   |||| || ||||| |||| ||||||||||||||  |||||||||||||||  |||| |    
T  48260056 attttgtccctgtaatttcaaattcttccacttttgatcgctcattccatcacgtcagcataatctgcatacatggcacgtaaaatgagggatcaaaagt 48259957  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggac 182  Q
    ||||||||||||||| ||||||| ||||||| |||||||| | |||||||| ||||    
T  48259956 ggaggaatctgaaataacagggaccaaaagtaggaggaatctgaaattacatggac 48259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 35376437 - 35376322
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaa 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||| |||||||| ||||||||||| |||||||| |||||||||||||||| ||    
T  35376437 ttaaattttgtccctgtaatttcagaatcttccacttttggtccctcattccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaa 35376338  T
Q  123 aaat-ggaggaatctg 137  Q
    || | |||||||||||    
T  35376337 aagtgggaggaatctg 35376322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 26252455 - 26252375
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  26252455 agggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggacca 26252375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 7819087 - 7819156
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttgg-tcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||||||||    
T  7819087 attttgtccctgtaatttcagattcttccacttttggttcctcc-tttcatcacgttagtaaaatctgcat 7819156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 46046729 - 46046660
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    |||||||||||||||||||||||||||||||||||| |||  | ||||| ||||| ||||||||||||||    
T  46046729 attttgtccctgtaatttcagattcttccacttttgatccctcctttcatcacgtcagcaaaatctgcat 46046660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 37013012 - 37012942
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||| |||||||||||||||    
T  37013012 attttgtccctgtaatttcatattcttccacttttggtcactcc-tttcatcacgtcagcaaaatctgcata 37012942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 3018085 - 3018155
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  3018085 attttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 3018155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 38574273 - 38574204
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||| ||||| | ||||||||||||    
T  38574273 attttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcaacaaaatctgcat 38574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 9619053 - 9619092
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9619053 attttgtccctgtaatttcagattcttccacttttggtcc 9619092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 26252341 - 26252380
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26252341 attttgtccctgtaatttcagattcttccacttttggtcc 26252380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 4355954 - 4356024
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||  |||||||||| |||||| ||||||||||||  ||||||| |||||||||| ||||||||||    
T  4355954 attttgtctatgtaatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctgcata 4356024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 18713033 - 18713103
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| ||| ||||| |||||||||  | ||||| ||||| |||||||||||||||    
T  18713033 attttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcata 18713103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 34064287 - 34064217
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||| |||||||||||||||||||||||||||||||    ||||| ||||| |||| ||||||||||    
T  34064287 attttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcata 34064217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 3273695 - 3273734
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3273695 attttgtccctgtaatttcatattcttccacttttggtcc 3273734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 9516915 - 9516876
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  9516915 attttgtccctgtaatttcagattcttctacttttggtcc 9516876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 31090366 - 31090327
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  31090366 attttgtccctgtaatttcagattcttctacttttggtcc 31090327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 9396772 - 9396842
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||| |||||||| ||| |||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  9396772 attttgtccctataatttcaaatttttccacttttggtccctcctttcatcacgtcagcagaatctgcata 9396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 31944023 - 31944061
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31944023 attttgtccctgtaatttcatattcttccacttttggtc 31944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 48580171 - 48580101
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| ||| |||||||||||||||  | ||||| ||| |||||| ||| ||||||    
T  48580171 attttgtccctgtaatttcatattgttccacttttggtccctcctttcatcaccttagcagaatatgcata 48580101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 36888943 - 36888979
Alignment:
Q  113 gagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36888943 gagggactaaaagtggaggaatctgaaattacaggga 36888979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 43312324 - 43312288
Alignment:
Q  113 gagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43312324 gagggactaaaagtggaggaatctgaaattacaggga 43312288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 13132242 - 13132207
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||| |||||||||||||||||||    
T  13132242 tgtccctgtaatttcatattcttccacttttggtcc 13132207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 15640788 - 15640827
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  15640788 attttgtccctgtaatttcatattctttcacttttggtcc 15640827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 35376235 - 35376305
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||| ||||||||| |||||||||||||||||||| |||| ||||| ||||| |||| |||| |||||    
T  35376235 attttgtctctgtaattttagattcttccacttttggtctctcc-tttcatcacgtcagcagaatccgcata 35376305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 41947072 - 41947127
Alignment:
Q  170 aaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||||| |||||| |||  | ||||||| ||||||||    
T  41947072 aaattacagggacgtaatttatgcagattctgttgactttatgaaagcagggacca 41947127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 43312278 - 43312321
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||    
T  43312278 ttaaattctgtccctgtaatttcagattcctccacttttagtcc 43312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 9516806 - 9516772
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  9516806 gtccctgtaatttcagattcctccacttttggtcc 9516772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 12904819 - 12904857
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  12904819 attttgtccttataatttcagattcttccacttttggtc 12904857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 35376346 - 35376269
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||| |||||||||||||||| |    ||||| |||| ||||||||||  |||||||||| ||||||||||||| |||||    
T  35376346 agggaccaaaagtgggaggaatctg---ttacatggacttaatttatgcggattctgctgacgtgatgaaaggagagacca 35376269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 31090257 - 31090216
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcctccattt 73  Q
    ||||| |||||||||||||| ||||||||||||||| |||||    
T  31090257 gtccccgtaatttcagattcctccacttttggtccttcattt 31090216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 7e-73; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 6817199 - 6817392
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||  ||||||||| |||||| ||||||||||    
T  6817199 tgtccatgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaaatggag 6817298  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6817299 gaatctgaaattaca-gaatcaaaagtgggaggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagtgacca 6817392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 20709289 - 20709481
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||| |||| ||||||||||||||  |||||||||||||||| |||| |||||    
T  20709289 tgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggacaaaaagtggag 20709388  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  20709389 gaatatgaaattacagggatcaaaagtgggaggaatctgaaattacagggatgtaatttatgcatattctgctgatgtgatgaaaggaaggac 20709481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 7125990 - 7126188
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||| ||||||||||||||||||||||||||||   ||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  7125990 attttgtccctataatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 7126089  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  7126090 ggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 7126188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 29445111 - 29444913
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| ||||||||||||||||||||||||||||||   ||| |||||||| || ||||| ||||||||||| |||||||||||||||| ||||||    
T  29445111 attttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggacaaaaaat 29445012  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    | |||||| |||||||||||||| ||||| | |||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  29445011 gtaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 29444913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 41001426 - 41001624
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| ||||| || |||| ||||||||||||||  |||||||||||||||||||||||    
T  41001426 attttgtccctgtaatttcatattcttccacttttggtccttcattccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaaaaat 41001525  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| || ||||||||||||  | ||||||||| ||| ||||||||| |  ||||| |||  ||||||||||||||||||    
T  41001526 ggaggaatctgaaattacagggaccagaagtgggaggaagatgaaattacagtgacataatttatgtaggttctgttgacttgatgaaaggagggacca 41001624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 4919063 - 4919258
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||| ||| ||||||||||  |||||||||||||||| |||| |    
T  4919063 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaagt 4919162  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    |||||||| ||||||||||| || ||||||| |||||||| | |||||||| ||||||||||||||||||||||| |||  |||||||||||||||    
T  4919163 ggaggaatttgaaattacagtgaccaaaagttggaggaatatgaaattacaaggacgtaatttatgcatattctgttgacttgatgaaaggaggga 4919258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 24650773 - 24650967
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||| |||||||||||| |||||||||||||||||    |||| |||||||| |||||||||||||||||||  |||||||||||||||| ||||||    
T  24650773 attttgttcctgtaatttcatattcttccacttttggtagctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaaat 24650872  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    ||||||||||||||||||||||| | |||||||||| ||| | |||||||||||| |||||||||||  |||||||||| ||||||||||||||||    
T  24650873 ggaggaatctgaaattacaggga-ccaaagtgggagaaatatgaaattacagggatgtaatttatgcggattctgctgacgtgatgaaaggaggga 24650967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 31799713 - 31799908
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| |||||||| |||| ||| || |||||||  | |||||||||||||| |||| |    
T  31799713 attttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaagt 31799812  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    |||||| | |||||||||||||| |||||||||||||||| | |||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  31799813 ggaggattttgaaattacagggaccaaaagtgggaggaatctgaaattaaagggacgtaatttatgcaaattctgctgacgtgatgaaaggaggga 31799908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 17762587 - 17762389
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||  ||||||||||||||||||||||||||||  |||| |||||||| |||| ||| ||||||||||  || ||||||||||||| |||| |    
T  17762587 attttgtccccataatttcagattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgggacataaaatgagggaccaaaagt 17762488  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||| |||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  17762487 ggaggaatctaaaattacagggaccaaaagcgggaggaatatgaaattacagggacgtaatttatgcagattctgcttacgtgattaaaggagggacca 17762389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 24837242 - 24837437
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||  |||| |||||||| |||| |||||| |||||||  |||||||||||||||  |||| |    
T  24837242 attttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagt 24837341  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    ||||||||||||||||||||||| |||||||| ||||||| | |||||||| |||||||||||||||| |||||| |||  |||||||||||||||    
T  24837342 ggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggaggga 24837437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 993820 - 994017
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||| |||| |||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||| |    
T  993820 atttagtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt 993919  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| || ||||||||||| |||||||||||||||| | |||||||||||||||||||||| || |||||| |||  |||| |||||||||||||    
T  993920 ggaggaatatg-aattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatacagattctgttgacatgataaaaggagggacca 994017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 14144206 - 14144008
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||   ||| |||||||| | || ||||||||||||||  |||||||||||||||| |||| |    
T  14144206 attttgtccctgtaatttcaaattcttccacttttggtcccttattccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaaaagt 14144107  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||| ||| ||||||||| |||||| | ||||||||||||||||||||||||| ||||| |||| ||||||||| |||| ||||    
T  14144106 ggaggaatttgaaattacatggaccaaaagtggaaggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaatgaggtacca 14144008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 24074607 - 24074410
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||   |||| ||||||| |||| |||||||||| |||  |||||||||||||||| |||| |    
T  24074607 attttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcagaatctgcatatatggcacgtaaaatgagggaccaaaagt 24074508  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| ||| |||||||||| ||||||||||||||| |||| | ||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  24074507 ggagaaatttgaaattaca-ggatcaaaagtgggatgaatctgaaattatggggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 24074410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 23979206 - 23979042
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  ||||||||||||| |||| ||||||||||||||| ||||||||||| |||| |||  |    
T  23979206 attttgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatga-ggaccaaacgt 23979108  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatg 192  Q
    |||| |||||||||||| ||||| |||||||||||| ||| | |||||||| ||||||||||||||    
T  23979107 ggagtaatctgaaattaaagggaccaaaagtgggagaaatatgaaattacaaggacgtaatttatg 23979042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 222
Target Start/End: Complemental strand, 18336761 - 18336578
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||||||||||||||| |||   ||| ||||| || |||| ||| || |||||||  |||||||||||||||| |||| |    
T  18336761 attttgtccctgtaatttcagattcttccacttttgatcccttattacaccatgtaagcagaatttgtatacatgtcacgtaaaatgagggaccaaaagt 18336662  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    |||||||||||||||||||            |||| |||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18336661 ggaggaatctgaaattaca------------gggacgaatctgaaattacagggacgtaatttatgcaaattctgctgatgtgatgaaaggaggga 18336578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 14411971 - 14411848
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||| |||||||| |||| ||||| ||||||||| |||||||||||||||| |||| |    
T  14411971 attttgtccttgtaatttcagattcttccacgtttggtccctcattccaccacgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaagt 14411872  T
Q  127 -ggaggaatctgaaattacaggga 149  Q
     |||||||||||||||||||||||    
T  14411871 gggaggaatctgaaattacaggga 14411848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 27159059 - 27159184
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||| |||||||||| |||||  |  |||||||||||||||  ||    
T  27159059 ttaaattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatctacatac--ggcacgtaaaatgagggatcaa 27159156  T
Q  123 aaat-ggaggaatctgaaattacaggga 149  Q
    || | |||||||||||||||||||||||    
T  27159157 aagtgggaggaatctgaaattacaggga 27159184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 14411884 - 14411804
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  14411884 agggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggacca 14411804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 27159148 - 27159228
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  27159148 agggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggacca 27159228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 222
Target Start/End: Original strand, 22571159 - 22571345
Alignment:
Q  36 ctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatc 135  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||| |  | ||| ||  | | ||| |||| ||||||||||| ||||  ||| ||||     
T  22571159 ctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatatgtgtgcgtgatacgtgaaatgagggaccaaaagcggatgaata 22571258  T
Q  136 tgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    |||||||| ||||| |||| || |||||||  | ||||||||||||||||||||||||| ||| || ||| ||| ||||| ||||||    
T  22571259 tgaaattagagggaccaaatgtaggaggaacctgaaattacagggacgtaatttatgcagattttgttgacgtggtgaaatgaggga 22571345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 30512360 - 30512458
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgt-aaaatgagggactaaaa 124  Q
    |||| ||||||||||||||||||| |||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||| |||||||||||| ||||    
T  30512360 atttggtccctgtaatttcagatttttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaa 30512458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 30552700 - 30552798
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgt-aaaatgagggactaaaa 124  Q
    |||| ||||||||||||||||||| |||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||| |||||||||||| ||||    
T  30552700 atttggtccctgtaatttcagatttttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaa 30552798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 7126222 - 7126152
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  7126222 attttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 7126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 14143974 - 14144044
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| ||||||||||||||||| |  ||||||| ||||| || | ||||||||||    
T  14143974 attttgtccctgtaatttcatattcttccacttttggtacctcatttcatcacgtcagtagaatctgcata 14144044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 17762355 - 17762425
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||| ||||||||||||||||||||||||||||||||  | ||| | ||||| |||| ||||||||||    
T  17762355 attttgttcctgtaatttcagattcttccacttttggtccctcctttaatcacgtaagcagaatctgcata 17762425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 20959396 - 20959330
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctg 93  Q
    |||||||||||| |||||||||||| ||||||||||||| | ||||| |||| ||||||| ||||||    
T  20959396 attttgtccctgcaatttcagattcctccacttttggtcgttcatttaaccatgttagcagaatctg 20959330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 24074376 - 24074446
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||| ||||||||||| |||||||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  24074376 attttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 24074446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 20947053 - 20947016
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacag 146  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20947053 aaatgagggactaaaaatggaggaatctgaaattacag 20947016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 994051 - 994012
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  994051 attttgtccctgtaattgcagattcttccacttttggtcc 994012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 41001658 - 41001619
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  41001658 attttgtccctataatttcagattcttccacttttggtcc 41001619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 6817426 - 6817388
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  6817426 attttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 14411770 - 14411840
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||  ||||||||||||||||||||||||||||||  | ||||| ||||| |||| ||| ||||||    
T  14411770 attttgtctatgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatttgcata 14411840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 4919295 - 4919260
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttg 62  Q
    |||||||||||||||||||||||||||| |||||||    
T  4919295 attttgtccctgtaatttcagattcttctacttttg 4919260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 18336541 - 18336576
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttg 62  Q
    ||||||||||||||||||||||||||||| ||||||    
T  18336541 attttgtccctgtaatttcagattcttccgcttttg 18336576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 18336638 - 18336672
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  18336638 gtccctgtaatttcagattcctccacttttggtcc 18336672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 20709517 - 20709447
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||| |||||||||| |||||||||||||| ||||| | ||||| ||| | |||| ||| ||||||    
T  20709517 attttgtccatgtaatttcatattcttccactttttgtccttcctttcatcacatcagcagaatatgcata 20709447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 24651004 - 24650934
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||| |||||||||||| ||||||||||||||||| |||  | ||||| ||||| |||| |||| |||||    
T  24651004 attttatccctgtaattttagattcttccacttttgatccctcctttcatcacgtcagcagaatccgcata 24650934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 27159262 - 27159192
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||| | ||||||||| |||||||||    ||||| ||||| |||| ||||||||||    
T  27159262 attttgtccctgtaattttatattcttccatttttggtcccttctttcatcacgtcagcagaatctgcata 27159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 29444883 - 29444949
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||| |||||||||| ||||||| |||||||||||  | ||||| ||||| |||| ||||||||||    
T  29444883 tgtccttgtaatttcatattcttctacttttggtccctcctttcatcacgtcagcagaatctgcata 29444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 31799945 - 31799875
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||| ||||||||||||||||||| |||||| |||  | ||||| ||||| |||| ||| ||||||    
T  31799945 attttgtccatgtaatttcagattcttcctcttttgatccctcctttcatcacgtcagcagaatttgcata 31799875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 41424593 - 41424655
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctg 93  Q
    ||||||||| ||||||||||||||||||||| ||||  ||||| | || || |||||||||||    
T  41424593 tgtccctgtcatttcagattcttccacttttagtccctcatttaaacatgtcagcaaaatctg 41424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 41425710 - 41425751
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacagggat 150  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  41425710 aaatgagggactaaagatggaagaatctgaaatgacagggat 41425751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 41424635 - 41424595
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||||||||||||||| |||| ||||||||||| |||||||    
T  41424635 aaatgagggactaaaagtggaagaatctgaaatgacaggga 41424595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 14262109 - 14262305
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| |||||| | |||| ||||||||||||||  |||||||||||||||| |||| |    
T  14262109 attttgtccctgtaatttcagattcttccacttttggtcccttattccaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 14262208  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  14262209 ggaggaatttgaaattacagggatcaaaagtggaaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggac 14262305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 23 - 225
Target Start/End: Complemental strand, 45970224 - 45970022
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaa 122  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||| |||| |||||||||| |||||||||||||||| ||    
T  45970224 ttaaattttgtccctgtaatttcagattcttccacttttggttccccattccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaa 45970125  T
Q  123 aaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    || ||||| |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||| |||  |||||||||||| ||    
T  45970124 aagtggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagaga 45970025  T
Q  223 cca 225  Q
    |||    
T  45970024 cca 45970022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 14162176 - 14161978
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| ||||||||||||||||||||||||||||||   ||| |||||||| |||||||| ||||||||||  |||||||||||||||| ||||||    
T  14162176 attttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaaat 14162077  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| ||||| | |||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  14162076 ggaggaatttgaaattacagggaccaaaattaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 14161978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 21633201 - 21633003
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||| || | ||||||||||||||  || ||||||||||||| |||| |    
T  21633201 attttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagt 21633102  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  21633101 ggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggacca 21633003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 35995751 - 35995949
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||| |    
T  35995751 attttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt 35995850  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||  ||||||||||||||  ||||||||||||||| ||||  |||| |||||||||||||||| ||||||| || |||||||||| ||||||||    
T  35995851 ggaggaacatgaaattacagggacaaaaagtgggaggaatctaaatatacaaggacgtaatttatgcagattctgcggacgtgatgaaagaagggacca 35995949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 15328765 - 15328569
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||| |||||||||||||||   ||| |||||||| |||| |||||||||| |||| |||||||||||| ||| |||| |    
T  15328765 attttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaagt 15328666  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    |||||||| |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||| ||| ||||||||| |||||||    
T  15328665 ggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggac 15328569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 5800910 - 5800712
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||   ||| |||||| | |||||||| ||||||||||  | |||||||||||||| ||||||    
T  5800910 attttgtccttgtaatttcatattcttccacttttggtcccttattccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggaccaaaaat 5800811  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| ||||| | |||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  5800810 ggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 5800712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 14171659 - 14171857
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| ||||||||||||||| |||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||  ||||||    
T  14171659 attttgtccctgtaatttcaaattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaaat 14171758  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||| || ||||||| ||||| ||| |||||| |||||||||||| ||||||    
T  14171759 ggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggtcgtaattgatgcagattttgctgacgtgatgaaaggaaggacca 14171857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 19112838 - 19113036
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||| ||||||| |||||||||||||||||||   ||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  19112838 attttgtccctggaatttcatattcttccacttttggtcccttattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagt 19112937  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| |||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||||| |||||| |||  ||||||||||||||||||    
T  19112938 ggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggacca 19113036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 9267048 - 9267246
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| || ||||| |||| |||||||||||||   |||||||||||||||| |||| |    
T  9267048 attttgtccctgtaatttcatattcttccacttttggtccctcattccagcacgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagt 9267147  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| ||| |||||||||||||||| | |||||||| |||| ||||||||||| |||||| |||  ||||||||||||||||||    
T  9267148 ggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacaaggacttaatttatgcagattctgttgacttgatgaaaggagggacca 9267246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 16722296 - 16722098
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||   ||| ||||| || |||| ||||||||||||||| |||||||||||||||| |||| |    
T  16722296 attttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt 16722197  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| || ||||||||||||| | ||||||||| ||| ||||||||||| |||||| |||  ||||||||| ||||||||    
T  16722196 ggaggaatctgaaattacagggaccagaagtgggaggaatctgaaattacagtgacataatttatgcagattctgttgacttgatgaaagaagggacca 16722098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 30500114 - 30500312
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||   ||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  30500114 attttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 30500213  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    | |||||| |||||||||| ||| |||||||||||||||| | |||||||||||| |||||||||| | ||| |||||| |||||||||||||||||||    
T  30500214 gaaggaatttgaaattacatggaccaaaagtgggaggaatctgaaattacagggatgtaatttatgtagattttgctgacgtgatgaaaggagggacca 30500312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 52552765 - 52552959
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||||||||||||||| |||   ||| ||||| || |||| ||||||||||||||| |||||||||||||||| |||| |    
T  52552765 attttgtccctgtaatttcagattcttccacttttgatcccttattccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt 52552864  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    | |||||| |||||||||||||| |||    ||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  52552865 gaaggaatttgaaattacagggaccaa----gggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 52552959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 27 - 222
Target Start/End: Complemental strand, 38283855 - 38283660
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||| |||||||||||||||||||||||| |||   |||||| ||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  38283855 attttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 38283756  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    |||||||| |||||||||| |||  ||||||||||||||| | ||||||||||||||||| ||||| | |||||||||| ||||||||||||||||    
T  38283755 ggaggaatttgaaattacacggacaaaaagtgggaggaatcttaaattacagggacgtaacttatgtagattctgctgacgtgatgaaaggaggga 38283660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 33372709 - 33372513
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||||||||||| ||| |||||||||||||||  |||| |    
T  33372709 attttgtccctgtaatttcagattcttccacttttgatcc-ccattccaccacgtcagcagaatctgcatac-tgacacgtaaaatgagggatcaaaagt 33372612  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| ||||||||||| || |||||||||||||||| | |||||||| |||| ||||| ||||| ||| |||||| |||||||||||||||||||    
T  33372611 ggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaattacaaggacttaattgatgcagattttgctgacgtgatgaaaggagggacca 33372513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 31 - 225
Target Start/End: Complemental strand, 43572692 - 43572496
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||| || |||| |||||||||||||||| |||| |||||    
T  43572692 tgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggaccaaaagtggag 43572593  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctga--tg-tgatgaaaggagggacca 225  Q
     ||| |||||||||||||| |||||||||||||||| | ||||||||||||||||| || |||| ||||||||||  || ||||||||||||||||||    
T  43572592 taatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggacgtaa-ttgtgcagattctgctgacttgatgatgaaaggagggacca 43572496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 45003801 - 45003605
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||| |||||| |||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  | |||||||||||||  |||| |    
T  45003801 atttagtccctataatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagt 45003702  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    |||||||| |||||||||||||| |||||||||||||||| | |||||||| ||||||||||||| || |||||| ||| |||||||||||||||||    
T  45003701 ggaggaatatgaaattacagggaacaaaagtgggaggaatctgaaattacaaggacgtaatttatacagattctgttgacgtgatgaaaggagggac 45003605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 37 - 225
Target Start/End: Complemental strand, 49986823 - 49986635
Alignment:
Q  37 tgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatct 136  Q
    |||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |||||||||||    
T  49986823 tgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatct 49986724  T
Q  137 gaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||| |||||||| ||||||| | |||||||| |||||||||||||||| |||||  | |  |||||||||||| |||||    
T  49986723 gaaattacagggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctattaaattgatgaaaggagagacca 49986635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 31 - 222
Target Start/End: Original strand, 4204785 - 4204976
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||  |||||||||||||||| |||| |||||    
T  4204785 tgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggag 4204884  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
     ||| ||||||||||| || ||| |||||||||||| | |||||| | ||| |||||||||||| ||||| |||| ||||| ||| ||||||    
T  4204885 taatatgaaattacagagaccaatagtgggaggaatctgaaattatatggatgtaatttatgcagattctactgacgtgataaaaagaggga 4204976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 20853769 - 20853967
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||| |||||||| |||||||||||||||||||  |||| |||||||| || | ||||||||||||||  |||||||||||||||| |||| |    
T  20853769 attttgtccctataatttcatattcttccacttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggaccaaaagt 20853868  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||| ||||||||| || || ||||||||||||| | ||||||||| ||| ||||||||||| ||| || |||  ||||||||||||||||||    
T  20853869 ggaggaatctaaaattacagagaccagaagtgggaggaatctgaaattacagtgacataatttatgcagattatgttgacttgatgaaaggagggacca 20853967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 225
Target Start/End: Original strand, 17465449 - 17465638
Alignment:
Q  35 cctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaat 134  Q
    |||||||||||||||||||||| ||||| ||   |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |||||||||    
T  17465449 cctgtaatttcagattcttccatttttgatctctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaat 17465548  T
Q  135 ctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
     |||||||||| ||| |||||||||||||||| | ||||||||| ||||||||||||| | ||| || ||| |||||||||||||||||||    
T  17465549 atgaaattaca-ggaccaaaagtgggaggaatctgaaattacagagacgtaatttatgtaaattttgttgacgtgatgaaaggagggacca 17465638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 37 - 225
Target Start/End: Original strand, 47575356 - 47575543
Alignment:
Q  37 tgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatct 136  Q
    |||||||| | |||||| |||||||||||| | ||| |||||||  |||| ||||||||||||||  |||||||||||||||  |||| ||||||||| |    
T  47575356 tgtaattttatattctttcacttttggtcc-ctattccaccacggcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaattt 47575454  T
Q  137 gaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||  ||||||||||| |||||||||| ||||||||||||| |||||    
T  47575455 gaaattacagggacaaaaaatgggaggaatttgaaattacagggatataatttatgcagattctgctgacgtgatgaaaggagagacca 47575543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 11003945 - 11003839
Alignment:
Q  119 ctaaaaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaagga 218  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||||||||| || |||  |||||||||||    
T  11003945 ctaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcatattttgttgacttgatgaaagga 11003846  T
Q  219 gggacca 225  Q
     ||||||    
T  11003845 tggacca 11003839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 14171891 - 14171822
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||| ||||||||||||||    
T  14171891 attttgtccctgtaatttctgattcttccacttttggtccttcctttcatcacgtcagcaaaatctgcat 14171822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 33372479 - 33372548
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    |||||||||||||||||||||||| |||||||||||||||  | ||||| ||||| ||||||||||||||    
T  33372479 attttgtccctgtaatttcagattattccacttttggtccctcctttcatcacgtcagcaaaatctgcat 33372548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 20854001 - 20853962
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20854001 attttgtccctgtaatttcagattcttccacttttggtcc 20853962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 43572462 - 43572501
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43572462 attttgtccctgtaatttcagattcttccacttttggtcc 43572501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 14161948 - 14162014
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||| |||||||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  14161948 tgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 14162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 30500346 - 30500276
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| ||| |||||||||||||||  | ||||| ||||| |||||||||| ||||    
T  30500346 attttgtccctgtaatttcatattgttccacttttggtccctcctttcatcacgtcagcaaaatctacata 30500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 52552993 - 52552923
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||| ||||||||||| |||||||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  52552993 attttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 52552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 11003805 - 11003844
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  11003805 attttgtccttgtaatttcagattcttccacttttggtcc 11003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 16722064 - 16722103
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  16722064 attttgtccatgtaatttcagattcttccacttttggtcc 16722103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 45003569 - 45003608
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  45003569 attttgtccctgtaatttcagattcttccactttttgtcc 45003608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 5800682 - 5800748
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||| ||||||||| |||||||||  | ||||| ||||| |||| ||||||||||    
T  5800682 tgtccctgtaatttcatattcttccatttttggtccctcctttcatcacgtcagcagaatctgcata 5800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 14262341 - 14262271
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| ||| |||||||||| ||||  | ||||| ||||| |||| ||||||||||    
T  14262341 attttgtccctgtaatttcatattgttccacttttagtccctcctttcatcacgtcagcagaatctgcata 14262271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 45969988 - 45970026
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  45969988 attttgtccctgtaatttcagattctttcacttttggtc 45970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 49986601 - 49986639
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  49986601 attttgtccctgtaatttcagattcttctacttttggtc 49986639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 1068955 - 1068915
Alignment:
Q  26 aattttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  1068955 aattttgtccctgtcatttcagattcttccacttttagtcc 1068915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 21632972 - 21633008
Alignment:
Q  30 ttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21632972 ttgtccctgtaatttcagattctttcacttttggtcc 21633008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 32998397 - 32998433
Alignment:
Q  113 gagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32998397 gagggactaaaagtggaggaatctgaaattacaggga 32998433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 9267280 - 9267241
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  9267280 attttgtccctgtaatatcagattcttctacttttggtcc 9267241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 17465676 - 17465633
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||| || |||||||| ||||||||||||    
T  17465676 ttaaattttgtccctgtaactttagattctttcacttttggtcc 17465633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 17649226 - 17649281
Alignment:
Q  170 aaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||||| |||||| |||  |||| ||||||| |||||    
T  17649226 aaattacagggacgtaatttatgcagattctgttgacttgataaaaggagagacca 17649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 19113070 - 19113031
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  19113070 attttatccctgtaatttcagattcttctacttttggtcc 19113031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 47575577 - 47575507
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||| ||||||||||||||| ||| |||||||||| |||| ||||| ||||| |||| ||||||||||    
T  47575577 attttgtctctgtaatttcagatttttcaacttttggtctctcc-tttcatcacgtcagcagaatctgcata 47575507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 16722173 - 16722207
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  16722173 gtccctgtaatttcagattcctccacttttggtcc 16722207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 17649315 - 17649277
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  17649315 attttgtccctgtaatttcagattattccacatttggtc 17649277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 49986710 - 49986744
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  49986710 gtccctgtaatttcagattcctccacttttggtcc 49986744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 35995981 - 35995944
Alignment:
Q  29 tttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||| | |||||||||||||||||||||||||||||    
T  35995981 tttgtctcagtaatttcagattcttccacttttggtcc 35995944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 4204827 - 4204787
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacaggga 149  Q
    ||||||||||| |||| |||| |||||||||||||||||||    
T  4204827 aaatgagggaccaaaagtggaagaatctgaaattacaggga 4204787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 43572650 - 43572690
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacaggga 149  Q
    ||||||||||| |||| |||| |||||||||||||||||||    
T  43572650 aaatgagggaccaaaagtggaagaatctgaaattacaggga 43572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 23806257 - 23806059
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||||||| ||||||||||  |||||||||||||||| |||| |    
T  23806257 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagt 23806158  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  23806157 ggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcggattctgctgacgtgatgaaaggagggacca 23806059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 26560627 - 26560825
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||| |||||||||||||||||||||||||||||||||||   ||| |||||||| |||| ||||||||||||||  |||||||||||||||  |||| |    
T  26560627 atttagtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt 26560726  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  26560727 ggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagagacca 26560825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 15106372 - 15106174
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||||||||||||||| |||  |||| |||||||| |||||||||||||||||||  |||||||||||||||  |||| |    
T  15106372 attttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaaaagt 15106273  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||| |||| ||||| ||||| |||  ||||| |||||||||||||||||||    
T  15106272 ggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacttaattgatgcagatttagctgacgtgatgaaaggagggacca 15106174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 31 - 225
Target Start/End: Complemental strand, 19251771 - 19251577
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    ||||| |||||||||| ||||||||||||| |||||  ||||||||||||| |||| ||||||||||||||  ||||||||||| |||| |||| |||||    
T  19251771 tgtccttgtaatttcatattcttccactttcggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtggag 19251672  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||| | || ||||||||| ||||||||||||||||||||||||||||||||    
T  19251671 gaatatgaaattacagggatcaaaagttggaggaatttgaaattacaagaacataatttatgtatattctgctgatgtgatgaaaggagggacca 19251577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 22263264 - 22263462
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||   ||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  22263264 attttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 22263363  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| ||||| | |||||||| | ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  22263364 ggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattatgctgacgtgatgaaaggagggacca 22263462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 42670792 - 42670990
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||   ||| |||||||| |||||||| ||| ||||||  |||||||||||||||| ||||||    
T  42670792 attttgtccttgtaatttcatattcttccacttttggtcccttattccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaaaaat 42670891  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| ||||| | |||||||| | |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  42670892 ggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 42670990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 32 - 225
Target Start/End: Complemental strand, 39878402 - 39878209
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggagg 131  Q
    ||||||||||||||||||| || ||||||||||||  ||||||||||||  |||| |||||||||| |||| |||||||||||||||| |||| |||||     
T  39878402 gtccctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagt 39878303  T
Q  132 aatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||||    
T  39878302 aatctgaaattagagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattttgctgacttgatgaaaggagtgacca 39878209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 20499050 - 20498852
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | |||| |||||||||||||   |||||||||||||||  |||| |    
T  20499050 attttgtccctgtaatttcagattctttcacttttggtccttcatttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggatcaaaagt 20498951  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||  ||||||||||||||||| |||||||||||||||| | |||||| |  ||||||||||||||| ||||| |||| ||||| |||||||||||||    
T  20498950 ggagtgatctgaaattacagggaccaaaagtgggaggaatatgaaattatattgacgtaatttatgcagattctactgacgtgataaaaggagggacca 20498852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 17463396 - 17463198
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||| || ||||||||||||||| |||  |||| ||||| || |||| ||||||||||||||  | |||||||||||||| |||| |    
T  17463396 attttgtccctgtaattgcatattcttccacttttgatccctcattccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggaccaaaatt 17463297  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
     ||||||||| |||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||| |||  |||||||| |||||||||    
T  17463296 agaggaatctaaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaatgagggacca 17463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 88 - 225
Target Start/End: Original strand, 23854800 - 23854937
Alignment:
Q  88 aatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaat 187  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  23854800 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgtaat 23854899  T
Q  188 ttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  23854900 ttatgcagattctgctgacgtgatgaaaggagggacca 23854937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 17850659 - 17850857
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| ||||||||| ||||||||||||||||| |||  |||| |||||||| |||| ||||||||||||||  || ||||||||||||  |||| |    
T  17850659 attttgtctctgtaatttaagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaagt 17850758  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||| ||| | |||||||||||||||| | |||||||| |||||||||| ||||| ||| |||||| ||||||||| |||||||||    
T  17850759 ggaggaatctgaaattaaaggaaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaagagggacca 17850857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 30 - 225
Target Start/End: Original strand, 13284484 - 13284679
Alignment:
Q  30 ttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatgga 129  Q
    ||||||||||||||||| |||||||||||||| ||||  ||||||||||||  | || ||||||||||||||| |||| ||||||||||| |||| || |    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaa 13284583  T
Q  130 ggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    | ||| |||||||||||||| |||||||||||||||| | |||||||| |||||||||||||| | |||||| ||| ||| | ||| |||||||||    
T  13284584 gaaatatgaaattacagggaccaaaagtgggaggaatcttaaattacaaggacgtaatttatgtagattctgttgacgtggttaaatgagggacca 13284679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 26136122 - 26135924
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||  |||||||||| ||||||||||||||| ||   | || || ||||| |||| ||||||||||||||  ||||||||| |||||| |||| |    
T  26136122 attttgtcattgtaatttcatattcttccacttttgatctctcgttccatcacgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaagt 26136023  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||| |||||||| ||| |||||||| ||||||| | |||||||| |||||||||||||||| |||||| |||  ||||||||||||||||||    
T  26136022 ggaggaatctaaaattacaaggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggacca 26135924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 33290354 - 33290176
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||| || |||||||||| |||||||||||||||||||   |||||||||||| |  ||||||||||||||||   | | ||||||||||| |||| |    
T  33290354 attttgaccttgtaatttcatattcttccacttttggtccctaatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaaaagt 33290255  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctga 205  Q
    ||||| ||||||||||||||||| |||||| ||||||||| | |||||||||||||| |||||||||| ||||||||||    
T  33290254 ggaggtatctgaaattacagggaccaaaagggggaggaatctgaaattacagggacgaaatttatgcagattctgctga 33290176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 30390532 - 30390654
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| ||||||||||||||||||   |||||||||||||||| ||||||    
T  30390532 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaaat 30390631  T
Q  127 ggaggaatctgaaattacaggga 149  Q
    | |||||||||||||||||||||    
T  30390632 gaaggaatctgaaattacaggga 30390654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 26236400 - 26236278
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||||||||| |||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  26236400 attttgtccctgtaatttcagattcttccatttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 26236301  T
Q  127 ggaggaatctgaaattacaggga 149  Q
    |||||||| ||||||||||||||    
T  26236300 ggaggaatatgaaattacaggga 26236278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 13254733 - 13254638
Alignment:
Q  35 cctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| | |||| |||| | |||||||| |||||||||||||||| |||| |||||    
T  13254733 cctgtaatttcagattcttccacttttggtccctcatttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaagtggag 13254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 26236313 - 26236234
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||| ||||||||| |||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  26236313 agggaccaaaagtgg-aggaatatgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggacca 26236234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 17850891 - 17850822
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||||||||    
T  17850891 attttgtccctgtaatttcagattcttccacttttggtccctcttttcatcacgtcagcaaaatctgcat 17850822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 22263496 - 22263426
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  22263496 attttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcataatctgcata 22263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 26236200 - 26236270
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||||||||||||| ||||||||||||  | ||||| ||||| |||| ||| ||||||    
T  26236200 attttgtccctgtaatttcagattctttcacttttggtccctcctttcatcacgtcagcagaatttgcata 26236270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 15106140 - 15106209
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    |||||||||||||||||| ||||| |||||||||||||||  | ||||| ||||| ||| ||||||||||    
T  15106140 attttgtccctgtaattttagattattccacttttggtccctcctttcatcacgtcagctaaatctgcat 15106209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 19251543 - 19251582
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  19251543 attttgtccctgtaatttcatattcttccacttttggtcc 19251582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 26135890 - 26135929
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  26135890 attttgtccctgtaatttcagattcttctacttttggtcc 26135929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 13284713 - 13284659
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgt 81  Q
    ||||||||| ||||||||||||||| ||||||||||||||  ||||| |||||||    
T  13284713 attttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgt 13284659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 17463164 - 17463234
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||||||| |||| |||||||||||||  ||||||| || || | || ||||||||||    
T  17463164 attttgtccctgtaatttcaggttctcccacttttggtccctcatttcatcaagtcaacagaatctgcata 17463234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 23806025 - 23806095
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||| ||||||||||| |||||||||||||||||||||  | ||||| ||||| |||| |||| |||||    
T  23806025 attttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcata 23806095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 23854971 - 23854901
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||| ||||||||| | |||||||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  23854971 attttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 23854901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 39878184 - 39878245
Alignment:
Q  36 ctgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||||||||||||| |||| ||||| || || |||||||||||||||    
T  39878184 ctgtaatttcagattcttccacttttggtcactcc-tttcatcaagtcagcaaaatctgcata 39878245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 42671020 - 42670954
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||| ||| |||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  42671020 tgtccctgtaatttcatatttttccacttttggtccctcctttcatcacgtcagcagaatctgcata 42670954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 23854761 - 23854797
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttgg 63  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23854761 attttgtccctgtaatttcatattcttccacttttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 26236355 - 26236394
Alignment:
Q  110 aatgagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  26236355 aatgagggaccaaaaatggaagaatctgaaattacaggga 26236394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 26560859 - 26560789
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||| | |||||||| |||||||||||||||||| |||| ||||| ||||| |||| ||||||||||    
T  26560859 attttgtccatataatttcatattcttccacttttggtctctcc-tttcatcacgtcagcagaatctgcata 26560789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 13254570 - 13254607
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggt 64  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  13254570 attttgtccttgtaatttcagattctttcacttttggt 13254607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 23046784 - 23046813
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttt 60  Q
    ||||||||||||||||||||||||||||||    
T  23046784 tgtccctgtaatttcagattcttccacttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 60
Target Start/End: Complemental strand, 44098923 - 44098894
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttt 60  Q
    ||||||||||||||||||||||||||||||    
T  44098923 tgtccctgtaatttcagattcttccacttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 13284527 - 13284487
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||||||||||||||| |||| |||| ||||||||||||||    
T  13284527 aaatgagggactaaaagtggaagaatatgaaattacaggga 13284487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 13284667 - 13284703
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattaca 145  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  13284667 aaatgagggaccaaaagtggaggaatctgaaattaca 13284703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 2e-63; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 10108675 - 10108477
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||   ||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  10108675 attttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 10108576  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| ||||||||||| |||| | |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  10108575 ggaggaatttgaaattacagggaccaaaagtgggacgaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 10108477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 225
Target Start/End: Original strand, 17622969 - 17623158
Alignment:
Q  36 ctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatc 135  Q
    ||||||||| |||||||||||||||||||||  |||| |||||||| |||| ||||||| ||||||  |||||||||||||||| |||| ||||||||||    
T  17622969 ctgtaattttagattcttccacttttggtccctcattccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtggaggaatc 17623068  T
Q  136 tgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||| |||||    
T  17623069 tgaaattacagggaccaaaagtgggaggaatttgaaattacagggacataatttatgcagattctgctgacgtgatgaaaggagtgacca 17623158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 27 - 220
Target Start/End: Complemental strand, 26136990 - 26136797
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| ||||||    
T  26136990 attttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaaat 26136891  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagg 220  Q
    |||||||||||||| |||| ||| |||||||||||| ||| | ||||||||||||||||||||||||| ||| ||||||  |||||||||||||    
T  26136890 ggaggaatctgaaagtacaaggaccaaaagtgggagaaatctgaaattacagggacgtaatttatgcagattatgctgacttgatgaaaggagg 26136797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 23 - 222
Target Start/End: Complemental strand, 2583629 - 2583430
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaa 122  Q
    ||||||||||||||| |||||||||||||||||||||||||| |  |||| |||||| | |||  ||||||||||||||  | |||||||||||||||||    
T  2583629 ttaaattttgtccctataatttcagattcttccacttttggttcctcattccaccacatcagccgaatctgcatacatggcatgtaaaatgagggactaa 2583530  T
Q  123 aaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    || ||||||||| |||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  2583529 aagtggaggaatttgaaattacagggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggaggga 2583430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 22494687 - 22494500
Alignment:
Q  29 tttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatgg 128  Q
    |||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||| ||| ||||||||||| |||||||||||||||| |||| |||    
T  22494687 tttgtccctgtaatttcaaattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggaccaaaagtgg 22494588  T
Q  129 aggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaag 216  Q
    |||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  22494587 aggaatctgaaattactgggaccaaaagtaggaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgattaaag 22494500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 23 - 225
Target Start/End: Complemental strand, 7689832 - 7689630
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaa 122  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||  ||    
T  7689832 ttaaattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaa 7689733  T
Q  123 aaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    || ||||||||||||||||||||||||  ||||||||||||||| | |||||||| |||||||||| ||||| ||| ||| |||||||||||| ||||||    
T  7689732 aagtggaggaatctgaaattacagggactaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgccgatgtgatgaaaagaggga 7689633  T
Q  223 cca 225  Q
    |||    
T  7689632 cca 7689630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 14767580 - 14767776
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||| |||||||||||||||   ||| |||||||| |||| |||||||||| |||| |||||||||||| ||| |||| |    
T  14767580 attttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaagt 14767679  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    |||||||| |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||| ||| ||||||||| |||||||    
T  14767680 ggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggac 14767776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 21148010 - 21148205
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| |||||||| |||| |||||||||| |||| |||||||||||||||| |||| |    
T  21148010 attttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaagt 21148109  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    |||||||| |||||||| | ||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  21148110 ggaggaatttgaaattata-ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacatgatgaaaggagggac 21148205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 43851737 - 43851933
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||||||||||||||| |||  |||| |||||| | |||| ||||||||||||||| |||||||||||||||  |||| |    
T  43851737 attttgtccctgtaatttcagattcttccacttttgatccctcattccaccacatcagcagaatctgcatacatgacacgtaaaatgagggatcaaaagt 43851836  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    |||||||| |||||||||||||| |||||||||||||||| | |||||||| |||||||||| ||||| ||| |||||| |||||||||||||||||    
T  43851837 ggaggaatatgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcaaattttgctgacgtgatgaaaggagggac 43851933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 42606058 - 42605860
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||| ||||||||| |||||||||||||||||||   ||| |||||||| |||| ||| ||||| ||||  |||||||||||||||| |||| |    
T  42606058 attttgtccccgtaatttcaaattcttccacttttggtccattattccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaagt 42605959  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  42605958 ggaggaatctgaaattacagcgaccaaaagcgggaggaatttgaaattacagggacgtaatttatgcatattctactgacgtgattaaaggagggacca 42605860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 14820599 - 14820401
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||   ||| |||||||| |||| |||||||||||||||  ||||||||||||||| |||| |    
T  14820599 attttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaaaagt 14820500  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
     ||||||| ||| ||||| |||| ||||| | |||| ||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14820499 agaggaatttgagattacggggagcaaaactaggagaaatctgaaattacagggacgtaatttatgcagattctgctgatgtgatgaaaggagggacca 14820401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 30789580 - 30789778
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| |||||||||||||||| |||||||||| |||  |||||||||||||||||||||||||||||||||  |||||| ||||||||  |||| |    
T  30789580 attttgtctctgtaatttcagattcctccacttttgatccctcatttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggatcaaaagt 30789679  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| ||| |||||||||||||||| | |||||||| |||||||||| ||||| ||| |||||| ||||||||| || ||||||    
T  30789680 ggaggaatctgaaattacaaggaccaaaagtgggaggaatatgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaacgatggacca 30789778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 31 - 222
Target Start/End: Original strand, 42113061 - 42113252
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    |||||||||||||| |||||||| ||||||||||||  ||||||||||||| |||| ||||||||||||||| || ||||||||||||| |||| |||||    
T  42113061 tgtccctgtaatttaagattctttcacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacataaaatgagggaccaaaagtggag 42113160  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
     ||| |||||||| ||||| |||||||||||||||| | ||||||||||||| ||||||||||| | | ||||||  |||||||||||||||    
T  42113161 taatatgaaattatagggaccaaaagtgggaggaatatgaaattacagggacataatttatgcagaatttgctgacatgatgaaaggaggga 42113252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 5555174 - 5554976
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||   ||| ||||| || ||||||||||||||| |||  |||||||||||||||| |||| |    
T  5555174 attttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggaccaaaagt 5555075  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    | ||||||  ||||||||||||| ||||| | |||||||| | ||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  5555074 gaaggaattcgaaattacagggaccaaaactaggaggaatctgaaattccagggacgtaatttatgcagattctgctgacgtgatgaaagaagggacca 5554976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 26532856 - 26533020
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| ||| ||||||||||| |||  |||| |||||||| |||| ||||||||||||||| ||||||||||||||| ||||| |    
T  26532856 attttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggattaaaagt 26532955  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttat 191  Q
    ||||||||||||||||| ||| | |||||||| ||||| ||| |||||||| ||| |||||||||    
T  26532956 ggaggaatctgaaattataggaaccaaaagtgtgaggagtttgaaattacaaggatgtaatttat 26533020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 43481406 - 43481578
Alignment:
Q  46 agattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatctgaaattaca 145  Q
    ||||||||||||||||||||   |||| |||||||  || | ||| ||||||||||  |||||||| ||||||  |||| ||||||||||| ||||||||    
T  43481406 agattcttccacttttggtctctcattccaccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaagtggaggaatctaaaattaca 43481505  T
Q  146 gggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaagga 218  Q
      || ||| ||  |||||||| | |||||||| |||||||||||||||| ||| |||||| ||||| ||||||    
T  43481506 aagaccaagagcaggaggaatctgaaattacaaggacgtaatttatgcagattgtgctgacgtgattaaagga 43481578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 30789812 - 30789743
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||||||||    
T  30789812 attttgtccctgtaatttcagattcttccacttttggtccatcgtttcatcacgtcagcaaaatctgcat 30789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 10108443 - 10108513
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||| ||||| |||| ||||||||||    
T  10108443 attttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 10108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 14820367 - 14820437
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||| ||| | |||| ||||||||||    
T  14820367 attttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacatcagcagaatctgcata 14820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 43481623 - 43481549
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||||||| ||||||||||| |||||| | | ||| | ||||| |||| ||||||||||    
T  43481623 ttaaattttgtccctgtaatttcaaattcttccactcttggtctttcctttaatcacgtcagcacaatctgcata 43481549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 22848399 - 22848522
Alignment:
Q  35 cctgtaatttcagattcttccacttttggtcctccatttcacc-acgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaa 133  Q
    ||||||||||||||||||| || |||||||||  | ||||||| |||| |  | |||||||||| |||  |||| |||||||| |  |||||||||||||    
T  22848399 cctgtaatttcagattctttcatttttggtccctcgtttcacccacgtcaaaagaatctgcataaatggcacgtgaaatgagg-ataaaaaatggaggaa 22848497  T
Q  134 tctgaaattacagggatcaaaagtg 158  Q
    | ||||||||||| || ||||||||    
T  22848498 tttgaaattacagagaccaaaagtg 22848522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 7689598 - 7689665
Alignment:
Q  29 tttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||| ||||||||||||||||||||||||||||||  | ||||| ||| |  |||||||||||||    
T  7689598 tttgtccttgtaatttcagattcttccacttttggtccctcttttcatcacatcggcaaaatctgcat 7689665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 17623192 - 17623122
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||| |||||||||| |||||||||||||||||| |||| ||||| ||||| |||| ||||||||||    
T  17623192 attttgtccttgtaatttcaaattcttccacttttggtcactcc-tttcatcacgtcagcagaatctgcata 17623122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 2583393 - 2583463
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||||| |||||||| ||||||| |||  | ||||| ||||| |||| ||||||||||    
T  2583393 attttgtccctgtaatttcggattcttctacttttgatccctcctttcatcacgtcagcagaatctgcata 2583463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 5554942 - 5555012
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||| |||||||| |||||||||||||||||||    ||||| ||||| |||| ||||||||||    
T  5554942 attttgtccctataatttcatattcttccacttttggtcccttctttcatcacgtcagcagaatctgcata 5555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 10171448 - 10171409
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  10171448 attttgtccctgtaattttagattctttcacttttggtcc 10171409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 21144721 - 21144756
Alignment:
Q  170 aaattacagggacgtaatttatgcatattctgctga 205  Q
    ||||||||||||||||||||||||| ||||||||||    
T  21144721 aaattacagggacgtaatttatgcagattctgctga 21144756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 42605826 - 42605865
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  42605826 attttatccctgtaatttcatattcttccacttttggtcc 42605865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 17623083 - 17623049
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  17623083 gtccctgtaatttcagattcctccacttttggtcc 17623049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 21144810 - 21144740
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||| ||||||||||||||| |||| |||| ||||   |||| ||||||| |||| ||||||||||    
T  21144810 attttgtccttgtaatttcagattcctccatttttcgtcccttatttaaccacgtcagcagaatctgcata 21144740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 21148241 - 21148171
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||| |||||||||| |||||||||||||| ||||  | ||||| || || |||| ||||||||||    
T  21148241 attttgtccttgtaatttcatattcttccacttttagtccctcctttcatcatgtcagcagaatctgcata 21148171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 22494458 - 22494527
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||| |||||||||||| ||||||||| |||||||||| | ||| | ||||| |||| ||||||||||    
T  22494458 attttgttcctgtaatttcatattcttccatttttggtccttc-tttaatcacgtcagcagaatctgcata 22494527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 38726760 - 38726793
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttt 60  Q
    ||||||||| ||||||||||||||||||||||||    
T  38726760 attttgtccttgtaatttcagattcttccacttt 38726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 21144764 - 21144800
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattaca 145  Q
    |||| |||||| |||||||||||||||||||||||||    
T  21144764 aaataagggacgaaaaatggaggaatctgaaattaca 21144800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 43851968 - 43851900
Alignment:
Q  28 ttttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||| ||||||||  |||||||||||||||| ||||  | ||||| ||||| |||||||| |||||    
T  43851968 ttttgtctctgtaattcaagattcttccactttttgtccctcctttcatcacgtcagcaaaatttgcat 43851900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 2e-63; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 12006613 - 12006811
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||||| ||||||||||||||  |||||||||||||||  |||| |    
T  12006613 attttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt 12006712  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||||||||||||| || |||||||||||||||| | |||||||| |||||||||| ||||| ||| |||||| |||||||||||||||||||    
T  12006713 ggaggaatctgaaattacagtgaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggacca 12006811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 23704966 - 23704768
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  23704966 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 23704867  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||||| |||||  |||  ||||||||||||||||||    
T  23704866 ggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggaagtaatttatgcagattctattgacttgatgaaaggagggacca 23704768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 41600031 - 41600229
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||| |||| |||  |||| ||||||||||||| ||||||||||||||  |||||||||||||||  |||| |    
T  41600031 attttgtccctgtaatttcagattcttccacatttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt 41600130  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||| ||||| ||| |||||| |||||||||||||||||||    
T  41600131 ggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggacca 41600229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 20458764 - 20458962
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| |||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  20458764 attttgtcgctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 20458863  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| ||| |||||| ||||||||| | ||||||||||||||||||||||||| |||||| |||  |||| |||||||||||||    
T  20458864 ggaggaatctgaaattacaaggaccaaaagcgggaggaatctgaaattacagggacgtaatttatgcaaattctgttgacttgatcaaaggagggacca 20458962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 20419609 - 20419807
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| ||||||||| |||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  20419609 attttgtccctgtaatttcatattcttccatttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagt 20419708  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| |||||||||||||||| | |||||||| |||||||||||||| | ||| || |||  ||||||||||||||||||    
T  20419709 ggaggaatatgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgaagattttgttgacttgatgaaaggagggacca 20419807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 38879797 - 38879995
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  || ||||||||||||| |||  |    
T  38879797 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacataaaatgagggaccaaattt 38879896  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||| || || |||||||||||||||| | ||||||||||||||||||||||||| |||||| |||  || |||||||||||||||    
T  38879897 ggaggaatctgaaattatagagaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgttgacttggtgaaaggagggacca 38879995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 44816908 - 44817106
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  44816908 attttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 44817007  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||||||||||||| |||||  |||  |||||||| |||||||||    
T  44817008 ggaggaatctgaaattacaaggaccaaaagtggaaggaatttgaaactacatgtacgtaatttatgcagattctattgacttgatgaaaagagggacca 44817106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 37 - 225
Target Start/End: Original strand, 31851322 - 31851510
Alignment:
Q  37 tgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatct 136  Q
    |||||||||| ||| ||||||||||| ||   | ||||||||||| |||| ||||||||||||||  |||||||||||||||| |||| ||||| ||| |    
T  31851322 tgtaatttcatatttttccacttttgatctctcttttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatat 31851421  T
Q  137 gaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31851422 gaaattacagggatcaaaattgagaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagagacca 31851510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 23383573 - 23383771
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||| |||||||| ||||||||| |||| ||||  |||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||| |    
T  23383573 attttgtccctataatttcatattcttccattttttgtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt 23383672  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    | |||||| |||||||||| ||| |||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||  ||||||||||||||||||    
T  23383673 gaaggaatttgaaattacaaggaccaaaagtgggaggaatctaaaattacaaggacgtagtttatgcagattctgttgacttgatgaaaggagggacca 23383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 48672352 - 48672550
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||| ||| ||||||||||||||||||||||||||| |||  |||| |||||||| |||| ||||||||||||||  | |||||||||||||  |||| |    
T  48672352 atttcgtctctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaagt 48672451  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||| ||||| ||| |||| | |||||||||||||||||||    
T  48672452 ggaggaatctgaaattacaaggaccaaaagtgggaggaatttgaaattacaaggacgtaattgatgcagattttgctaacgtgatgaaaggagggacca 48672550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 27 - 220
Target Start/End: Original strand, 20963568 - 20963761
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||| ||||||||||||| |||||||||||||||||||||  |||| | |||| | |||| ||||||||||||||  |||||||||||||||| |||| |    
T  20963568 atttagtccctgtaattttagattcttccacttttggtccctcattccgccacataagcagaatctgcatacatggcacgtaaaatgagggaccaaaagt 20963667  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagg 220  Q
    ||| |||| |||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||| ||| || ||| ||||||||||||||    
T  20963668 ggaagaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcaaattatgttgacgtgatgaaaggagg 20963761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 10409679 - 10409483
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||| ||||||||| ||||||||||||||||| |||  |||| ||||||||||||| ||||||||||||||  | |||||||||||||  |||| |    
T  10409679 attttgtctctgtaattttagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaagt 10409580  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggac 223  Q
    ||||||||||||||||||| ||| ||||||| |||||||| | |||||||| |||||||||| ||||| ||| |||||| |||||||||| ||||||    
T  10409579 ggaggaatctgaaattacaaggaccaaaagtaggaggaatctgaaattacaaggacgtaattgatgcagattttgctgaagtgatgaaagaagggac 10409483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 23 - 225
Target Start/End: Original strand, 1250275 - 1250477
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaa 122  Q
    ||||||||||||| | |||||| ||||||||||||||||||||   |||| |||||||| |||  ||||||||||||||  | ||||||||| ||| |||    
T  1250275 ttaaattttgtccttttaattttagattcttccacttttggtctctcattccaccacgtcagctgaatctgcatacatgtcatgtaaaatgaaggattaa 1250374  T
Q  123 aaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    || ||||||||| || |||||||| || ||||| | |||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  1250375 aagtggaggaatatggaattacagtgaccaaaaataggaggaatttgaaattacagggacgtaatttatgcagattcttctgacgtgatgaaaggaggga 1250474  T
Q  223 cca 225  Q
    |||    
T  1250475 cca 1250477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 7658048 - 7658240
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    ||||| |||||||||| |||||| ||||||||||||  | ||||| ||||| |||||||||||||| ||||  ||||||||||||||||||||| | ||     
T  7658048 tgtccatgtaatttcaaattcttacacttttggtccatcctttcatcacgtcagcaaaatctgcat-catgtcacgtaaaatgagggactaaaagtagat 7658146  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||| ||| | |||||||||||||||| | ||||||||||||| ||||||||||| ||| |||||| ||||||||||||| |||||    
T  7658147 gaatctgaaattaaagg-accaaaagtgggaggaatatgaaattacagggacataatttatgcagattttgctgacgtgatgaaaggagagacca 7658240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 222
Target Start/End: Complemental strand, 33162830 - 33162645
Alignment:
Q  37 tgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatct 136  Q
    |||||||||| |||||||||||||| ||| | ||||||||||||| |||| ||||||||||||||  || ||||||||||||| |||| || || |||||    
T  33162830 tgtaatttcaaattcttccacttttagtctttcatttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatct 33162731  T
Q  137 gaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    ||||||||| ||| ||||||||| |||||||| |||||||| | ||||||||||| || ||||| |||| |||||||||| |||||    
T  33162730 gaaattacacggaccaaaagtggaaggaatttgaaattacaagaacgtaatttatacagattctactgacgtgatgaaagaaggga 33162645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 28218252 - 28218434
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||| |||||||||                ||||||| |||| |    
T  28218252 attttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcat----------------gagggaccaaaagt 28218335  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||||| ||| || ||| |||||||||||||||||||    
T  28218336 ggagtaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggagggacca 28218434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 6466077 - 6465961
Alignment:
Q  109 aaatgagggactaaaaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgt 208  Q
    ||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||| ||    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacagggatcaaaagtgggaggaatttgaaattacagggacataatttatgcagattcttctgacgt 6465978  T
Q  209 gatgaaaggagggacca 225  Q
    |||||||||||||||||    
T  6465977 gatgaaaggagggacca 6465961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 24195101 - 24194941
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaa-----atgagggacta 121  Q
    ||||||||| |||||||||| |||||||||||||||||||  |||| || ||||| |||| ||||||||||||||| |||||||     ||||||||| |    
T  24195101 attttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcagaatctgcatacatgatacgtaaaatgaaatgagggacca 24195002  T
Q  122 aaaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggac 182  Q
    ||| |||||||||||||||||| ||||| |||||||| ||||||| | |||||||||||||    
T  24195001 aaagtggaggaatctgaaattatagggaccaaaagtgagaggaatctgaaattacagggac 24194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 25772436 - 25772554
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| ||||||||||||||| |||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  25772436 attttgtccttgtaatttcatattcttccacttttgttccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagt 25772535  T
Q  127 ggaggaatctgaaattaca 145  Q
    |||||||||||||||||||    
T  25772536 ggaggaatctgaaattaca 25772554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 48648334 - 48648456
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||||||| || || |||||||||  |||| |||||||| || | ||||||||||||||  |||||||| ||||||| |||| |    
T  48648334 attttgtccctgtaatttcagattttttcatttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggaccaaaatt 48648433  T
Q  127 ggaggaatctgaaattacaggga 149  Q
    |||||||||||||||||||||||    
T  48648434 ggaggaatctgaaattacaggga 48648456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 12006845 - 12006776
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||||||||    
T  12006845 attttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcaaaatctgcat 12006776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 16995272 - 16995341
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||| |||||||||    
T  16995272 attttgtccctgtaatttcagattcttccacttttggtcccacattccaccacgtcagcagaatctgcat 16995341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 41600263 - 41600194
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||||||||    
T  41600263 attttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcaaaatctgcat 41600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 48672584 - 48672515
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||| ||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||||||||    
T  48672584 attttatccctgtaatttcagattcttccacttttggtccctcctttcatcacgttagcaaaatctgcat 48672515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 48648434 - 48648500
Alignment:
Q  159 ggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| | ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  48648434 ggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaggagggacca 48648500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 28218468 - 28218399
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||| ||||| | ||||||||||||    
T  28218468 attttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaaaatctgcat 28218399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 7658274 - 7658204
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||| |||||||||||||||    
T  7658274 attttgtccctgtaatttaagattcttccacttttggtctctcc-tttcatcacgtcagcaaaatctgcata 7658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 38880029 - 38879959
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||| || | || ||||||||||    
T  38880029 attttgtccctgtaatttcagattcttccacttttggtccctcctttcaccaagtcaacagaatctgcata 38879959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 25772523 - 25772602
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||| ||||||||| |||||| | |||||||| |||||||||||||||| |||||| |||  ||||||||||||||||||    
T  25772523 agggaccaaaagtgg-aggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggacca 25772602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 23704734 - 23704773
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23704734 attttgtccctgtaatttcagattcttccacttttggtcc 23704773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 20419841 - 20419802
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  20419841 attttgtccctgtaatttcagattcttctacttttggtcc 20419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 20458996 - 20458957
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  20458996 attttgtcactgtaatttcagattcttccacttttggtcc 20458957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 25772636 - 25772597
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  25772636 attttgtccctgtaatttcagattcttctacttttggtcc 25772597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 1250511 - 1250441
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||| |||||||| |||||||||||||||||||  | ||||| ||||| || | ||||||||||    
T  1250511 attttgtccctttaatttcatattcttccacttttggtccctcctttcatcacgtcagaagaatctgcata 1250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 20963799 - 20963757
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctcc 69  Q
    |||| |||||||||||||||||||||| |||||||||||||||    
T  20963799 atttagtccctgtaatttcagattctttcacttttggtcctcc 20963757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 31851544 - 31851506
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31851544 attttgtccctgtaatttcatattcttccacttttggtc 31851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 6465937 - 6465997
Alignment:
Q  37 tgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| || | ||||||||||    
T  6465937 tgtaatttcagattcttccacttttggtccctcctttcatcacgtcagaagaatctgcata 6465997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 23383805 - 23383766
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  23383805 attttgtccctgtaatttcatattcttccacctttggtcc 23383766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 23704843 - 23704877
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  23704843 gtccctgtaatttcagattcctccacttttggtcc 23704877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 10409447 - 10409516
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcat 96  Q
    ||||||||| |||||||||||||||||| |||||| ||||    ||||| ||| | ||||||||||||||    
T  10409447 attttgtccttgtaatttcagattcttctacttttagtcccttctttcatcacttcagcaaaatctgcat 10409516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 7842554 - 7842518
Alignment:
Q  113 gagggactaaaaatggaggaatctgaaattacaggga 149  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  7842554 gaggaactaaaagtggaggaatctgaaattacaggga 7842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 24194936 - 24194976
Alignment:
Q  27 attttgtccctgtaatttcagattcttc-cacttttggtcc 66  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  24194936 attttgtccctgtaatttcagattcctctcacttttggtcc 24194976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 119; Significance: 6e-61; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 4868 - 4670
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  4868 attttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagt 4769  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||||| |||||| |||  |||| |||||||||||||    
T  4768 ggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacacggacgtaatttatgcagattctgttgacttgataaaaggagggacca 4670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 4632 - 4675
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  4632 ttaaattttgtccctgtaatttgagattcttctacttttggtcc 4675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 4745 - 4779
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtcc 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 8627 - 8430
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||| |||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||| ||||||||||||| || ||||||    
T  8627 attttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagg-accaaaaat 8529  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||||| ||||| ||| || ||| ||||||||||||| |||||    
T  8528 ggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggagagacca 8430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 6e-61; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 9481487 - 9481289
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| ||||||||||||||||||||||||||||||   ||| |||||||| |||||||| ||||||||||  ||| |||||||||||| ||||||    
T  9481487 attttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggacaaaaaat 9481388  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| |||||||||||||| ||||| | |||||||| | |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  9481387 ggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggacca 9481289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 24732243 - 24732045
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  24732243 attttgtccatgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagt 24732144  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||||||||||||||| ||||| |||||||||||||||| | |||||||| |||||||||||||| | ||| || |||  ||||||||||||||||||    
T  24732143 ggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgtagattatgttgacttgatgaaaggagggacca 24732045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 30618266 - 30618069
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||| |||||||||||||||| |||    ||| |||||||| |||| ||||| ||||||||  |||||||||||||||| |||| |    
T  30618266 attttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggaccaaaagt 30618167  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||| ||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  30618166 ggaggaatttgaaattacagtgatcaaaagtggga-gaatctgaaattacagggacgtaatttatgcagattctgctgacgtgataaaaggagggacca 30618069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 201
Target Start/End: Original strand, 33714560 - 33714734
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||| |||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||  |||||||||||||||| |||| |    
T  33714560 attttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagt 33714659  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctg 201  Q
    |||||||||||||||||||| || |||||||| ||||||| | |||||||| |||||||||||||||| ||||||    
T  33714660 ggaggaatctgaaattacagagaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctg 33714734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 26385351 - 26385521
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||| | |||||||||||||||||||  |||| |||||||| |||| |||||| |||||||  |||||||||||||||| |||| |    
T  26385351 attttgtccctgtaattttatattcttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagt 26385450  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatatt 198  Q
    ||||||||||||||||||||||| ||||| |||||||||| | ||||||||||||||| |||||||||||||    
T  26385451 ggaggaatctgaaattacagggaccaaaactgggaggaatatgaaattacagggacgt-atttatgcatatt 26385521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 33 - 225
Target Start/End: Original strand, 10321809 - 10322002
Alignment:
Q  33 tccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat-ggagg 131  Q
    |||||||||||||| |||||| |||||||| |||  ||||||||||||| ||||  |||||||||||||  ||||||||| |||| |||||||| ||||     
T  10321809 tccctgtaatttcatattcttacacttttgctccctcatttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggggctaaaaattggagt 10321908  T
Q  132 aatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||||||||||||| | | |||||||||||||||| | |||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||    
T  10321909 aatctgaaattacatgaaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggaaggacca 10322002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 30458978 - 30459172
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    |||| ||||||||||||||||||| |||||| |||   ||||||||||||| |||| ||||||||||||||| |||||||||||| ||  |||| || |     
T  30458978 tgtcactgtaatttcagattcttcaacttttagtctctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtgaaa 30459077  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
     |||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||| | ||| |||| | ||||||||||||| |||||    
T  30459078 taatctgaaattacaaggaccaaaagtgggaggaatttgaaattatagggacgtaatttatggagattatgctaacgtgatgaaaggagagacca 30459172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 32 - 222
Target Start/End: Original strand, 2299389 - 2299577
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggagg 131  Q
    ||||||||||||||| |||||||||||||| ||||  |||| |||||||| |||| ||| || |||||||  |||||||||||||||| |||| ||| ||    
T  2299389 gtccctgtaatttca-attcttccacttttagtccctcattccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtggcgg 2299487  T
Q  132 aatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggaggga 222  Q
    ||||| |||||||| ||| |||||||||||||||| | ||| ||||||||||||||||||||| |||||| |||  |||||||||||||||    
T  2299488 aatctaaaattacaaggaccaaaagtgggaggaatctgaaa-tacagggacgtaatttatgcagattctgttgacttgatgaaaggaggga 2299577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 182
Target Start/End: Original strand, 18500387 - 18500543
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||| |    
T  18500387 attttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt 18500486  T
Q  127 ggaggaatct-gaaattacagggatcaaaagtgggaggaat-ttaaaattacagggac 182  Q
    ||||||||||  |||||||||||| ||||||| |||||||| | ||||||||||||||    
T  18500487 ggaggaatctaaaaattacagggaccaaaagt-ggaggaatctaaaaattacagggac 18500543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 3229990 - 3230124
Alignment:
Q  81 ttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacaggg 180  Q
    |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||||| ||| |||||||||||||||| | |||||||||||    
T  3229990 ttagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggg 3230089  T
Q  181 acgtaatttatgcatattctgctgatgtgatgaaa 215  Q
    |||| ||||||||| |||||| ||| |||||||||    
T  3230090 acgtgatttatgcagattctgttgacgtgatgaaa 3230124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 14680955 - 14681133
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    ||||||||  |||||||||| |||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |||| ||| ||| ||| |||| |    
T  14680955 attttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagaccaaaagt 14681054  T
Q  127 ggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctga 205  Q
    |||| |||||||||||| | ||| |||||||| ||| ||| | |||||||||||||||||| | |||| ||||| ||||    
T  14681055 ggagaaatctgaaattatatggaccaaaagtgagagtaatctgaaattacagggacgtaatatgtgcagattctactga 14681133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 32017619 - 32017732
Alignment:
Q  37 tgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatct 136  Q
    |||||||||||||||||||||||||||||||  ||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||| ||||||||| |    
T  32017619 tgtaatttcagattcttccacttttggtcctttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaattt 32017718  T
Q  137 gaaattacagggat 150  Q
    ||||||||||||||    
T  32017719 gaaattacagggat 32017732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 33637831 - 33637710
Alignment:
Q  29 tttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat-g 127  Q
    |||||||||||||||||| |||||| |||||||| |||  |||| |||||||| |||| ||||||||||||| | |||||||||||||||| |||| | |    
T  33637831 tttgtccctgtaatttcatattctttcacttttgatccctcattccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtgg 33637732  T
Q  128 gaggaatctgaaattacaggga 149  Q
    ||||||||||||||||||||||    
T  33637731 gaggaatctgaaattacaggga 33637710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 9854192 - 9854118
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatg 101  Q
    ||||||||| |||||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  9854192 attttgtccttgtaatttcatattcttccacttttggtccctcatttcaccacgtcagcaaaatctgcatacatg 9854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 32017696 - 32017775
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  32017696 agggaccaaaagtgg-aggaatttgaaattacagggatgtaatttatgcatattccgctgacgtgatgaaaggagggacca 32017775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 33637746 - 33637666
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    ||||| |||||||||||||||| | |||||||||||||||||| |||||| |||||||||| || ||||||||||||||||    
T  33637746 agggaccaaaagtgggaggaatctgaaattacagggacgtaatctatgcagattctgctgacgtaatgaaaggagggacca 33637666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 17142798 - 17142875
Alignment:
Q  114 agggactaaaaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttat 191  Q
    |||||| |||| |||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||| ||||||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacagggacctaatttat 17142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 10322040 - 10321966
Alignment:
Q  23 ttaaattttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| | ||||| ||||| |||| ||||||||||    
T  10322040 ttaaattatgtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcata 10321966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 18500506 - 18500618
Alignment:
Q  114 agggactaaaaatggaggaatctgaaa-ttacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatg 212  Q
    |||||| |||| ||||||||||| ||| ||||||||| ||||||||| | | || | ||||||||||||| ||||||||||| |||||| ||   |||||    
T  18500506 agggaccaaaagtggaggaatctaaaaattacagggaccaaaagtggaaaggatctgaaattacagggacataatttatgcagattctgttgccttgatg 18500605  T
Q  213 aaaggagggacca 225  Q
    |||||||||||||    
T  18500606 aaaggagggacca 18500618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 19284202 - 19284241
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19284202 attttgtccctgtaatttcagattcttccacttttggtcc 19284241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 24732011 - 24732050
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  24732011 attttgtccctgtaatttcagattcttctacttttggtcc 24732050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 32017809 - 32017770
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  32017809 attttgtccctgtaatttcatattcttccacttttggtcc 32017770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 2299614 - 2299580
Alignment:
Q  27 attttgtccctgtaatttcagattcttccactttt 61  Q
    |||||||||||||||||||||||||||||||||||    
T  2299614 attttgtccctgtaatttcagattcttccactttt 2299580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 9481259 - 9481325
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||| ||||||||| |||||||||  | ||||| ||||| |||| ||||||||||    
T  9481259 tgtccctgtaatttcatattcttccaattttggtccctcctttcatcacgtcagcagaatctgcata 9481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 30618035 - 30618105
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| ||| |||||||||||||||  | ||| | ||||| |||| ||||||||||    
T  30618035 attttgtccctgtaatttcatattgttccacttttggtccctccttttatcacgtcagcagaatctgcata 30618105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 9154953 - 9154990
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggt 64  Q
    |||||||||||||||||||||||||||||| |||||||    
T  9154953 attttgtccctgtaatttcagattcttccagttttggt 9154990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 17142754 - 17142788
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtc 65  Q
    |||||||||||||||| ||||||||||||||||||    
T  17142754 tgtccctgtaatttcaaattcttccacttttggtc 17142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 17142834 - 17142800
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  17142834 gtccctgtaatttcagattcctccacttttggtcc 17142800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 26385474 - 26385440
Alignment:
Q  32 gtccctgtaatttcagattcttccacttttggtcc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  26385474 gtccctgtaatttcagattcctccacttttggtcc 26385440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 33637632 - 33637702
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||| | |||||||| |||||||||||||||||||||  | |||||  |||| |||| ||||||||||    
T  33637632 attttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcata 33637702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 30459196 - 30459136
Alignment:
Q  37 tgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||| ||||||||||| |||| ||||| |||||||||| ||||| ||||    
T  30459196 tgtaatttcagattctttcacttttggtctctcc-tttcatcacgttagcataatctccata 30459136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 31 - 225
Target Start/End: Complemental strand, 1711 - 1517
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    ||||| ||||||||||||||||||||||||||||||  ||  ||||||| | |||| ||||||||||||||  |||||||||||||||| |||| |||||    
T  1711 tgtccttgtaatttcagattcttccacttttggtccctcacatcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggag 1612  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
     |||||||||||||| ||| |||||||||||||||| | |||||| |||||||||||||||| | |||||||||| |||||||||||||||||||    
T  1611 taatctgaaattacaaggaccaaaagtgggaggaatctgaaattatagggacgtaatttatgtagattctgctgacgtgatgaaaggagggacca 1517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 1487 - 1553
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| ||||| |||| ||||| ||||    
T  1487 tgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatctacata 1553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 3946 - 4140
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggag 130  Q
    |||||||||||||||| ||||||||||| ||||||   |||||||||| || |||| |||||||| |||||  | |||||||||||||| |||| |||||    
T  3946 tgtccctgtaatttcaaattcttccactgttggtcgctcatttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggaccaaaagtggag 4045  T
Q  131 gaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggacca 225  Q
    |||| ||||||||||| || |||||||||||||||| | ||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||    
T  4046 gaatatgaaattacagtgaccaaaagtgggaggaatctgaaattacagagacataatttatgcagattctgctgacgtgatgaaaggagggacca 4140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 4164 - 4104
Alignment:
Q  37 tgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcata 97  Q
    ||||||||||||||||| || |||||||||  | ||||| ||||| |||| ||||||||||    
T  4164 tgtaatttcagattctttcatttttggtccctcctttcatcacgtcagcagaatctgcata 4104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 219
Target Start/End: Original strand, 305 - 484
Alignment:
Q  39 taatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaatggaggaatctga 138  Q
    ||||||||||||||||||||||||||||  |||| |||||| | |||| ||| ||||||||||  |||||||||||||||| |||| | |||||||||||    
T  305 taatttcagattcttccacttttggtccctcattccaccacataagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtagaggaatctga 404  T
Q  139 aattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggag 219  Q
    ||||||||||| |||||  ||||||||| | ||||||||  ||||||||||||||| |||||||||||||||| |||||||    
T  405 aattacagggaccaaaatcgggaggaatctgaaattaca-agacgtaatttatgcagattctgctgatgtgattaaaggag 484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 5053 - 4934
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatacatgaaacgtaaaatgagggactaaaaat 126  Q
    |||| ||||||||||||| |||||||||||||||||||||  |||| |||||||| |||| ||||| ||||||||  |||||||||||||||| |||| |    
T  5053 atttagtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagt 4954  T
Q  127 -ggaggaatctgaaattaca 145  Q
     |||| ||| ||||||||||    
T  4953 gggagaaatatgaaattaca 4934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 7299 - 7427
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaat----ctgcatacatgaaacgtaaaatgagggactaa 122  Q
    |||||||||||||||||||| ||||||||||||| |||||  |||| |||||||  ||||||||    |||||||||||  |||||||||||||||| ||    
T  7299 attttgtccctgtaatttcatattcttccactttcggtccctcattccaccacggaagcaaaatctgactgcatacatggtacgtaaaatgagggaccaa 7398  T
Q  123 aaatgg-aggaatctgaaattacagggat 150  Q
    || ||| ||||||||||||||||| ||||    
T  7399 aagtggtaggaatctgaaattacaaggat 7427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 7504 - 7466
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc 65  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  7504 attttgtccctgtaatttcagattcttctacttttggtc 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 7390 - 7463
Alignment:
Q  145 agggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaagga 218  Q
    ||||| ||||||||| |||||| | |||||||| ||| |||||||||||| ||| || |||  |||||||||||    
T  7390 agggaccaaaagtggtaggaatctgaaattacaaggatgtaatttatgcagattttgttgacttgatgaaagga 7463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 15797 - 15903
Alignment:
Q  118 actaaaaatggaggaatctgaaattacagggatcaaaagtgggaggaatttaaaattacagggacgtaatttatgcatattctgctgatgtgatgaaagg 217  Q
    ||||||| | ||||||| ||||||||||| || |||||||||||||||| | ||||||||| |   ||||||||||| |||||||||| |||||||||||    
T  15797 actaaaagttgaggaatttgaaattacagagaccaaaagtgggaggaatctgaaattacagcg-tataatttatgcagattctgctgacgtgatgaaagg 15895  T
Q  218 agggacca 225  Q
    || |||||    
T  15896 agagacca 15903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 15937 - 15867
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtc-ctccatttcaccacgttagcaaaatctgcata 97  Q
    |||||||||||||||||||| |||||| ||||||||||| |||| ||||| ||||| |||| ||||||||||    
T  15937 attttgtccctgtaatttcatattctttcacttttggtctctcc-tttcatcacgtcagcagaatctgcata 15867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 12287 - 12216
Alignment:
Q  27 attttgtccctgtaatttcagattcttccacttttggtcctccatttcaccacgttagcaaaatctgcatac 98  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||| ||||| |||| |||||||||||    
T  12287 attttgtccctgtaatttcagattcttccacttttggtccatcctttcatcacgtcagcagaatctgcatac 12216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 4744 - 4779
Alignment:
Q  31 tgtccctgtaatttcagattcttccacttttggtcc 66  Q
    ||||||||||||||||||||| ||||||||||||||    
T  4744 tgtccctgtaatttcagattcctccacttttggtcc 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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