View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21455_low_29 (Length: 226)

Name: NF21455_low_29
Description: NF21455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21455_low_29
NF21455_low_29
[»] chr8 (36 HSPs)
chr8 (1-226)||(21603570-21603795)
chr8 (1-79)||(15976794-15976872)
chr8 (1-79)||(17287782-17287860)
chr8 (1-79)||(22672241-22672319)
chr8 (3-75)||(19941685-19941757)
chr8 (1-73)||(20257190-20257262)
chr8 (3-79)||(22463078-22463154)
chr8 (1-64)||(17015014-17015077)
chr8 (1-64)||(17542124-17542187)
chr8 (1-79)||(25164723-25164801)
chr8 (1-67)||(3350178-3350244)
chr8 (1-67)||(9366958-9367024)
chr8 (1-67)||(13690113-13690179)
chr8 (1-67)||(15782254-15782320)
chr8 (1-67)||(19234042-19234108)
chr8 (1-67)||(19427586-19427652)
chr8 (1-79)||(19940550-19940628)
chr8 (1-67)||(26119574-26119640)
chr8 (1-67)||(29085655-29085721)
chr8 (1-67)||(30316268-30316334)
chr8 (1-67)||(32079239-32079305)
chr8 (1-67)||(36087186-36087252)
chr8 (1-67)||(36302190-36302256)
chr8 (1-67)||(44490378-44490444)
chr8 (2-79)||(18152634-18152711)
chr8 (3-79)||(21297389-21297465)
chr8 (1-67)||(251072-251138)
chr8 (1-67)||(814173-814239)
chr8 (1-67)||(19137944-19138010)
chr8 (1-67)||(29075404-29075470)
chr8 (15-67)||(16745679-16745731)
chr8 (15-67)||(3842207-3842259)
chr8 (15-79)||(45569565-45569629)
chr8 (2-79)||(24666889-24666966)
chr8 (15-61)||(23791910-23791956)
chr8 (15-67)||(22149148-22149200)
[»] scaffold0022 (4 HSPs)
scaffold0022 (1-79)||(157591-157669)
scaffold0022 (1-67)||(45306-45372)
scaffold0022 (18-79)||(35906-35967)
scaffold0022 (18-79)||(133966-134027)
[»] chr7 (41 HSPs)
chr7 (1-79)||(13173840-13173918)
chr7 (1-79)||(21212208-21212286)
chr7 (1-79)||(13028553-13028631)
chr7 (1-79)||(4413593-4413671)
chr7 (1-79)||(13680799-13680877)
chr7 (3-77)||(16669761-16669835)
chr7 (3-77)||(17644129-17644203)
chr7 (1-73)||(16547629-16547701)
chr7 (1-73)||(16617961-16618033)
chr7 (1-79)||(14172116-14172194)
chr7 (18-79)||(16311605-16311666)
chr7 (1-67)||(176135-176201)
chr7 (1-67)||(458578-458644)
chr7 (1-67)||(1996801-1996867)
chr7 (1-67)||(2707205-2707271)
chr7 (1-67)||(4221253-4221319)
chr7 (1-67)||(6868822-6868888)
chr7 (1-67)||(8626590-8626656)
chr7 (1-67)||(9442508-9442574)
chr7 (1-67)||(11003824-11003890)
chr7 (1-67)||(11014433-11014499)
chr7 (1-67)||(20988302-20988368)
chr7 (1-67)||(22098386-22098452)
chr7 (1-67)||(24743346-24743412)
chr7 (1-67)||(26391686-26391752)
chr7 (1-67)||(40043696-40043762)
chr7 (1-67)||(42875093-42875159)
chr7 (1-67)||(8003658-8003724)
chr7 (1-67)||(9093632-9093698)
chr7 (1-67)||(9168826-9168892)
chr7 (1-63)||(13878595-13878657)
chr7 (1-67)||(15879414-15879480)
chr7 (1-67)||(17951706-17951772)
chr7 (1-67)||(26654928-26654994)
chr7 (2-79)||(16106644-16106721)
chr7 (3-79)||(16309324-16309400)
chr7 (1-79)||(13176073-13176150)
chr7 (3-78)||(16408250-16408328)
chr7 (17-67)||(18439856-18439906)
chr7 (3-78)||(15087407-15087482)
chr7 (6-79)||(13262287-13262360)
[»] chr3 (59 HSPs)
chr3 (1-79)||(14908297-14908375)
chr3 (3-79)||(16029471-16029547)
chr3 (1-79)||(18123275-18123353)
chr3 (1-79)||(5211136-5211214)
chr3 (1-79)||(11188454-11188532)
chr3 (1-73)||(2559653-2559725)
chr3 (3-79)||(14078939-14079015)
chr3 (1-73)||(17244815-17244887)
chr3 (1-67)||(6183474-6183540)
chr3 (1-67)||(9983396-9983462)
chr3 (1-67)||(10628456-10628522)
chr3 (1-67)||(13374176-13374242)
chr3 (1-67)||(13384770-13384836)
chr3 (1-67)||(16397528-16397594)
chr3 (1-79)||(53058343-53058421)
chr3 (1-78)||(19886707-19886784)
chr3 (1-67)||(4752982-4753048)
chr3 (1-67)||(5538529-5538595)
chr3 (1-67)||(5581141-5581207)
chr3 (1-67)||(5867204-5867270)
chr3 (1-67)||(6491854-6491920)
chr3 (1-67)||(11273893-11273959)
chr3 (1-67)||(12239126-12239192)
chr3 (1-67)||(12288488-12288554)
chr3 (1-67)||(14474884-14474950)
chr3 (1-67)||(16392556-16392622)
chr3 (1-67)||(19787685-19787751)
chr3 (1-67)||(23766557-23766623)
chr3 (1-67)||(24385026-24385092)
chr3 (1-67)||(24669133-24669199)
chr3 (1-67)||(28315746-28315812)
chr3 (1-67)||(29462726-29462792)
chr3 (1-67)||(38203915-38203981)
chr3 (1-67)||(39381347-39381413)
chr3 (1-67)||(41692912-41692978)
chr3 (9-67)||(505678-505736)
chr3 (1-67)||(5519531-5519597)
chr3 (1-67)||(8783926-8783992)
chr3 (1-67)||(13130933-13130999)
chr3 (1-67)||(20674705-20674771)
chr3 (1-67)||(37875724-37875790)
chr3 (1-67)||(37884242-37884308)
chr3 (15-67)||(9382172-9382224)
chr3 (15-79)||(12754281-12754345)
chr3 (15-79)||(15847571-15847635)
chr3 (15-79)||(17016452-17016516)
chr3 (1-67)||(7796129-7796195)
chr3 (1-67)||(11207603-11207669)
chr3 (2-79)||(16306624-16306701)
chr3 (15-67)||(1785585-1785637)
chr3 (15-67)||(4432437-4432489)
chr3 (15-67)||(8997459-8997511)
chr3 (15-67)||(13263181-13263233)
chr3 (15-67)||(14312920-14312972)
chr3 (15-67)||(29935071-29935123)
chr3 (15-67)||(29984225-29984277)
chr3 (15-67)||(1062812-1062864)
chr3 (17-61)||(15652623-15652667)
chr3 (3-79)||(18696518-18696594)
[»] chr1 (30 HSPs)
chr1 (6-79)||(18613626-18613699)
chr1 (1-79)||(21196253-21196331)
chr1 (1-66)||(17720326-17720391)
chr1 (1-79)||(21125924-21126002)
chr1 (1-79)||(21207373-21207451)
chr1 (1-79)||(23023322-23023400)
chr1 (1-67)||(3180806-3180872)
chr1 (1-67)||(4176507-4176573)
chr1 (1-67)||(5641260-5641326)
chr1 (1-67)||(5842409-5842475)
chr1 (1-67)||(7516479-7516545)
chr1 (1-67)||(7691021-7691087)
chr1 (1-67)||(12615873-12615939)
chr1 (1-67)||(12739733-12739799)
chr1 (1-67)||(21876353-21876419)
chr1 (1-67)||(25449830-25449896)
chr1 (1-67)||(35639589-35639655)
chr1 (1-67)||(36237980-36238046)
chr1 (1-67)||(38093664-38093730)
chr1 (1-67)||(38104290-38104356)
chr1 (1-67)||(47609486-47609552)
chr1 (1-67)||(51630742-51630808)
chr1 (23-79)||(22431524-22431580)
chr1 (1-67)||(19186410-19186476)
chr1 (1-55)||(20943222-20943276)
chr1 (1-79)||(22017768-22017846)
chr1 (3-79)||(9345234-9345310)
chr1 (15-67)||(20874779-20874831)
chr1 (3-79)||(22958544-22958620)
chr1 (2-54)||(23976027-23976079)
[»] scaffold0315 (1 HSPs)
scaffold0315 (1-79)||(7121-7199)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-79)||(7110-7188)
scaffold0047 (15-67)||(34454-34506)
[»] chr6 (34 HSPs)
chr6 (1-79)||(19448530-19448608)
chr6 (1-79)||(19450524-19450602)
chr6 (1-67)||(9114011-9114077)
chr6 (1-79)||(17926239-17926317)
chr6 (1-63)||(26940857-26940919)
chr6 (1-67)||(27502921-27502987)
chr6 (1-67)||(28253086-28253152)
chr6 (1-67)||(28331835-28331901)
chr6 (2-67)||(26042813-26042878)
chr6 (1-67)||(3670661-3670727)
chr6 (1-67)||(12718354-12718420)
chr6 (1-67)||(25984694-25984760)
chr6 (1-67)||(26034637-26034703)
chr6 (1-67)||(26874019-26874085)
chr6 (1-67)||(27350962-27351028)
chr6 (1-67)||(27383354-27383420)
chr6 (1-67)||(27411702-27411768)
chr6 (1-67)||(27473738-27473804)
chr6 (1-67)||(32302564-32302630)
chr6 (1-67)||(32963464-32963530)
chr6 (3-79)||(17447260-17447336)
chr6 (1-67)||(12864148-12864214)
chr6 (1-67)||(16958225-16958291)
chr6 (1-63)||(20031443-20031505)
chr6 (1-67)||(34808680-34808746)
chr6 (3-79)||(14054900-14054976)
chr6 (3-79)||(13137991-13138067)
chr6 (3-67)||(18553908-18553972)
chr6 (15-79)||(22385239-22385303)
chr6 (1-65)||(25804285-25804349)
chr6 (15-67)||(17610112-17610164)
chr6 (15-67)||(22307424-22307476)
chr6 (15-67)||(11204595-11204647)
chr6 (15-67)||(17062852-17062904)
[»] chr4 (32 HSPs)
chr4 (1-79)||(10662763-10662841)
chr4 (1-79)||(10876908-10876986)
chr4 (1-79)||(16852366-16852444)
chr4 (1-67)||(5021413-5021479)
chr4 (1-67)||(18065252-18065318)
chr4 (1-73)||(17246028-17246100)
chr4 (1-67)||(459840-459906)
chr4 (1-67)||(4989307-4989373)
chr4 (1-67)||(10742110-10742176)
chr4 (1-67)||(10955879-10955945)
chr4 (1-79)||(14905900-14905978)
chr4 (1-67)||(16265142-16265208)
chr4 (1-67)||(17927376-17927442)
chr4 (1-67)||(18131761-18131827)
chr4 (1-67)||(18754002-18754068)
chr4 (1-67)||(19945850-19945916)
chr4 (1-67)||(22005694-22005760)
chr4 (1-67)||(24649608-24649674)
chr4 (1-67)||(27175351-27175417)
chr4 (1-67)||(27665850-27665916)
chr4 (1-67)||(30928005-30928071)
chr4 (1-67)||(36027568-36027634)
chr4 (1-67)||(49516814-49516880)
chr4 (1-67)||(16316004-16316070)
chr4 (1-67)||(27816458-27816524)
chr4 (1-67)||(40455872-40455938)
chr4 (1-67)||(55746764-55746830)
chr4 (15-67)||(14837620-14837672)
chr4 (15-67)||(15195437-15195489)
chr4 (15-67)||(3380793-3380845)
chr4 (6-79)||(13694720-13694793)
chr4 (19-67)||(14712335-14712383)
[»] chr2 (33 HSPs)
chr2 (1-79)||(22783193-22783271)
chr2 (15-79)||(24842658-24842722)
chr2 (1-79)||(21137555-21137633)
chr2 (15-79)||(24723839-24723903)
chr2 (1-79)||(22254054-22254132)
chr2 (1-73)||(28702794-28702866)
chr2 (1-67)||(4219114-4219180)
chr2 (1-67)||(9899101-9899167)
chr2 (1-67)||(10276205-10276271)
chr2 (1-67)||(11396700-11396766)
chr2 (1-67)||(21163475-21163541)
chr2 (1-67)||(22916388-22916454)
chr2 (1-67)||(24329277-24329343)
chr2 (1-67)||(27230657-27230723)
chr2 (1-67)||(34791745-34791811)
chr2 (1-67)||(35262222-35262288)
chr2 (1-67)||(35272847-35272913)
chr2 (1-67)||(39171622-39171688)
chr2 (1-67)||(40249827-40249893)
chr2 (3-79)||(10900065-10900141)
chr2 (3-79)||(24303615-24303691)
chr2 (9-67)||(9764291-9764349)
chr2 (1-67)||(43091897-43091963)
chr2 (1-67)||(43353648-43353714)
chr2 (15-67)||(24416554-24416606)
chr2 (20-79)||(24574502-24574561)
chr2 (1-67)||(29253438-29253504)
chr2 (2-79)||(21919626-21919703)
chr2 (15-67)||(19303956-19304008)
chr2 (15-67)||(26876200-26876252)
chr2 (15-63)||(28722850-28722898)
chr2 (17-79)||(25119919-25119979)
chr2 (15-77)||(24803169-24803231)
[»] scaffold0161 (2 HSPs)
scaffold0161 (3-79)||(11645-11721)
scaffold0161 (3-79)||(16318-16394)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-79)||(27224-27302)
[»] scaffold0359 (1 HSPs)
scaffold0359 (2-79)||(7260-7337)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-73)||(17573-17645)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-67)||(53286-53352)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-79)||(111175-111253)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-79)||(209859-209937)
[»] chr5 (51 HSPs)
chr5 (1-79)||(21200621-21200699)
chr5 (1-79)||(26782878-26782956)
chr5 (1-67)||(31420296-31420362)
chr5 (1-67)||(5299706-5299772)
chr5 (1-67)||(6977437-6977503)
chr5 (1-67)||(9337585-9337651)
chr5 (1-67)||(14031673-14031739)
chr5 (1-67)||(14456176-14456242)
chr5 (1-67)||(14567217-14567283)
chr5 (1-67)||(15741600-15741666)
chr5 (1-67)||(16002460-16002526)
chr5 (1-67)||(17608693-17608759)
chr5 (1-67)||(17720549-17720615)
chr5 (1-67)||(22148147-22148213)
chr5 (1-67)||(22677747-22677813)
chr5 (1-67)||(23297908-23297974)
chr5 (1-67)||(23363727-23363793)
chr5 (1-67)||(23394040-23394106)
chr5 (1-67)||(23698411-23698477)
chr5 (1-67)||(24568719-24568785)
chr5 (1-79)||(26763914-26763992)
chr5 (1-67)||(27051401-27051467)
chr5 (1-67)||(27461793-27461859)
chr5 (1-67)||(30236590-30236656)
chr5 (1-67)||(31350165-31350231)
chr5 (1-67)||(31835111-31835177)
chr5 (1-67)||(34773540-34773606)
chr5 (1-67)||(35217134-35217200)
chr5 (1-67)||(36591681-36591747)
chr5 (1-67)||(36689329-36689395)
chr5 (1-67)||(39354127-39354193)
chr5 (1-67)||(39500051-39500117)
chr5 (1-67)||(40391989-40392055)
chr5 (1-67)||(42044411-42044477)
chr5 (3-79)||(11209614-11209690)
chr5 (1-67)||(1120466-1120532)
chr5 (1-67)||(24826039-24826105)
chr5 (1-67)||(24981974-24982040)
chr5 (1-67)||(27621336-27621402)
chr5 (1-67)||(37739131-37739197)
chr5 (3-67)||(19465603-19465667)
chr5 (3-67)||(20553446-20553510)
chr5 (15-79)||(23487072-23487136)
chr5 (9-67)||(24809547-24809605)
chr5 (1-67)||(34053591-34053657)
chr5 (1-67)||(43620458-43620524)
chr5 (15-67)||(17455891-17455943)
chr5 (15-79)||(25113517-25113581)
chr5 (15-79)||(25172608-25172672)
chr5 (15-61)||(21704542-21704588)
chr5 (15-61)||(13532446-13532492)
[»] scaffold0389 (1 HSPs)
scaffold0389 (3-67)||(12408-12472)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-61)||(2692-2752)
[»] scaffold0105 (1 HSPs)
scaffold0105 (1-67)||(38506-38572)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-79)||(47770-47847)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-79)||(66956-67034)
scaffold0011 (15-79)||(166241-166305)
[»] scaffold0498 (1 HSPs)
scaffold0498 (3-63)||(1782-1842)
[»] scaffold1820 (1 HSPs)
scaffold1820 (15-79)||(96-160)
[»] scaffold1507 (1 HSPs)
scaffold1507 (1-79)||(919-997)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-67)||(3060-3126)
[»] scaffold0211 (2 HSPs)
scaffold0211 (2-79)||(1083-1160)
scaffold0211 (15-79)||(1229-1293)
[»] scaffold0116 (2 HSPs)
scaffold0116 (30-79)||(22512-22561)
scaffold0116 (3-33)||(25711-25741)
[»] scaffold0925 (1 HSPs)
scaffold0925 (15-79)||(3766-3830)
[»] scaffold0758 (1 HSPs)
scaffold0758 (2-78)||(2807-2883)
[»] scaffold0037 (1 HSPs)
scaffold0037 (10-79)||(75726-75796)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-67)||(44738-44804)
scaffold0017 (1-67)||(55041-55107)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-46)||(43324-43369)
[»] scaffold0272 (1 HSPs)
scaffold0272 (15-67)||(23901-23953)
[»] scaffold0042 (1 HSPs)
scaffold0042 (15-67)||(3951-4003)
[»] scaffold0443 (1 HSPs)
scaffold0443 (21-67)||(2563-2609)
[»] scaffold0068 (1 HSPs)
scaffold0068 (15-61)||(9322-9368)
[»] scaffold0185 (1 HSPs)
scaffold0185 (15-67)||(31755-31807)
[»] scaffold0043 (1 HSPs)
scaffold0043 (17-79)||(3288-3350)
[»] scaffold0382 (1 HSPs)
scaffold0382 (15-79)||(2829-2894)


Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 21603795 - 21603570
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtctgaacactagatttagcttcct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21603795 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtctgaacactagatttagcttcct 21603696  T
Q  101 caaagctctgaacactattggagcccaaccttacattaagatcctatctcacctatgcaaacctgcaattcaaatcctaatttttacataatatcagtta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21603695 caaagctctgaacactattggagcccaaccttacattaagatcctatctcacctatgcaaacctgcaattcaaatcctaatttttacatcatatcagtta 21603596  T
Q  201 taggttctctttttctgaagtatttg 226  Q
    || |||||||||| ||||||||||||    
T  21603595 taagttctcttttactgaagtatttg 21603570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15976794 - 15976872
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15976794 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 15976872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17287860 - 17287782
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  17287860 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 17287782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22672241 - 22672319
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  22672241 ctttgagagagctgacaagatcctcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 22672319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 19941685 - 19941757
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttag 75  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19941685 ttgaaagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagtagtaaccttag 19941757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20257262 - 20257190
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 73  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20257262 cttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctt 20257190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 22463154 - 22463078
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  22463154 ttgagagagctgacaagatcttcaacacttaaagagtttaaatttttagcttcctcaatagcagtaaccttaagtct 22463078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17015014 - 17015077
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagc 64  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17015014 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagc 17015077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17542187 - 17542124
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagc 64  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17542187 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagc 17542124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25164723 - 25164801
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||| |||||    
T  25164723 ctttgagagagctgacaagatcttcagcacttaaaatgtttaaatctttagttttctcaatagcagtaacctttggtct 25164801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3350244 - 3350178
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  3350244 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3350178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9366958 - 9367024
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  9366958 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9367024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13690179 - 13690113
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  13690179 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 13690113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15782320 - 15782254
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  15782320 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 15782254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19234042 - 19234108
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  19234042 ctttgagtgaactaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 19234108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19427586 - 19427652
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  19427586 ctttgagtgaactaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 19427652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19940550 - 19940628
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| |||||    
T  19940550 ctttgagaacgctgacaagatcttcaacacttaaagtgttcaaatctttagcttcctcaatatcagtcacctttggtct 19940628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26119574 - 26119640
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  26119574 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26119640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29085655 - 29085721
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  29085655 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 29085721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30316334 - 30316268
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  30316334 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30316268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32079305 - 32079239
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  32079305 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32079239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36087186 - 36087252
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36087186 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36087252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36302190 - 36302256
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36302190 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36302256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44490378 - 44490444
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  44490378 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 44490444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 18152711 - 18152634
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||| || ||||| |||||||||| ||||||||||||||||| ||||||||||||||| ||||| |||||    
T  18152711 tttgagagagctcaccagatcctcaacacttagagtgtttaaatctttagtttcctcaatagcagtcacctttggtct 18152634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 21297389 - 21297465
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  21297389 ttgagggaactaacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcaccttaggtct 21297465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 251072 - 251138
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||    
T  251072 ctttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 251138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 814173 - 814239
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||    
T  814173 ctttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 814239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19137944 - 19138010
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||    
T  19137944 ctttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 19138010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29075404 - 29075470
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||| |||| |||| ||| ||||||||||||||||||||    
T  29075404 ctttgagtgagctaacaagatcttcaacacttcaagtatttagatccttagcttcctcaatagcagt 29075470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 16745679 - 16745731
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  16745679 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 16745731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 3842207 - 3842259
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  3842207 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 3842259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 45569629 - 45569565
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||| |||||||||||| || ||||||| ||| |||||||| ||||| |||||||||||||||||    
T  45569629 acaaaatcttcaacactcaatgtgtttagatccttagcttcttcaatggcagtaaccttaggtct 45569565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 24666889 - 24666966
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||| | |  |||||||||||||| ||| |||| || |||||||||||||||||  || |||||||||||    
T  24666889 tttgagagagcttataccatcttcaacacttagagtatttagatttttagcttcctcaatagatgtcaccttaggtct 24666966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 23791910 - 23791956
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaat 61  Q
    |||||||| |||||||| |||||||||| ||| ||||||||||||||    
T  23791910 acaagatcctcaacactcaaagtgtttagatccttagcttcctcaat 23791956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 22149200 - 22149148
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| || ||||||| ||| ||||||||| |||| |||||    
T  22149200 acaagatcttcaacactcaaggtgtttagatccttagcttccacaatggcagt 22149148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 157591 - 157669
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  157591 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 157669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45372 - 45306
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  45372 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 45306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 35906 - 35967
Alignment:
Q  18 agatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  35906 agatcttcaaaacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 35967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 133966 - 134027
Alignment:
Q  18 agatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  133966 agatcttcaaaacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 134027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13173918 - 13173840
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13173918 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaataacagtaaccttaggtct 13173840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21212286 - 21212208
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21212286 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcatcaatagcagtaaccttaggtct 21212208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13028631 - 13028553
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  13028631 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcgatagcagtaaccttaggtct 13028553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4413671 - 4413593
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  4413671 ctttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 4413593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13680799 - 13680877
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  13680799 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatatttagcttcctcaatagcagtcacctttggtct 13680877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 16669835 - 16669761
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggt 77  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16669835 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttaacttcctcaatagcggtaaccttaggt 16669761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 17644203 - 17644129
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggt 77  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  17644203 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttaacttcctcaatagcggtaaccttaggt 17644129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16547701 - 16547629
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 73  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16547701 ctttaagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctt 16547629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16617961 - 16618033
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 73  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16617961 ctttaagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctt 16618033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 14172116 - 14172194
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||    
T  14172116 ctttgagagagctgacaagatcctcaacacttaaagtgttaaaatctttagcttcctcaatagtagtcacctttggtct 14172194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 16311666 - 16311605
Alignment:
Q  18 agatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  16311666 agatcttcaacacttaaagtgtttaaatctttagcttcctcaatggcagtaacctttggtct 16311605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 176135 - 176201
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  176135 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 176201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 458644 - 458578
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  458644 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 458578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1996801 - 1996867
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  1996801 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 1996867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2707271 - 2707205
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  2707271 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 2707205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4221253 - 4221319
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  4221253 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4221319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6868888 - 6868822
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  6868888 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 6868822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8626590 - 8626656
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  8626590 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 8626656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9442508 - 9442574
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  9442508 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9442574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11003824 - 11003890
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  11003824 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11003890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11014433 - 11014499
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  11014433 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11014499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20988302 - 20988368
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  20988302 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 20988368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22098386 - 22098452
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  22098386 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22098452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24743346 - 24743412
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  24743346 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24743412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26391752 - 26391686
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  26391752 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26391686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40043762 - 40043696
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  40043762 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40043696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42875093 - 42875159
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  42875093 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 42875159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8003724 - 8003658
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  8003724 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 8003658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9093632 - 9093698
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  9093632 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 9093698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9168826 - 9168892
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  9168826 ctttgagggaactgacaagatcttcaacactcaaagtgtttaaatccttagcttcctcaatagcagt 9168892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13878595 - 13878657
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatag 63  Q
    ||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  13878595 ctttgagagagatgacaagttcttcaacacttaatgtgtttaaatctttagcttcctcaatag 13878657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15879480 - 15879414
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  15879480 ctttgagtgaactaacaagatcttcaacacttaaaatgtttagatccttagcttcctcaatagcagt 15879414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17951772 - 17951706
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||    
T  17951772 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagctttctcaatagcagt 17951706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26654994 - 26654928
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||    
T  26654994 ctttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 26654928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 16106721 - 16106644
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||  |||| ||||||||||||||||| |||||||||||| |||||||||||||| ||| | |||||||||||    
T  16106721 tttgagagtactaataagatcttcaacacttagagtgtttaaatcattagcttcctcaattgcattcaccttaggtct 16106644  T

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Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 16309400 - 16309324
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| | |||||| |||||| ||| ||| |||||||| ||||||||||||||||||||||| ||||||||    
T  16309400 ttgagagagcttataagatcctcaacagttagagtttttaaatccttagcttcctcaatagcagtaactttaggtct 16309324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13176150 - 13176073
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||| || || |||||||||||||||||||| ||||||| ||| |||||||||||||| ||||| || ||||||||    
T  13176150 ctttgagggaactgacaagatcttcaacacttaa-gtgtttagatccttagcttcctcaatggcagtcactttaggtct 13176073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 16408250 - 16408328
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagt---gtttaaatctttagcttcctcaatagcagtaaccttaggtc 78  Q
    ||||||||||| | ||||||||||||||||| |||   |||||||||  |||||||||||| || ||||||||||||||    
T  16408250 ttgagagagctcataagatcttcaacacttagagtactgtttaaatccctagcttcctcaaaagtagtaaccttaggtc 16408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 18439856 - 18439906
Alignment:
Q  17 aagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  18439856 aagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 18439906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 15087407 - 15087482
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtc 78  Q
    ||||||||||| |  |||||||||| ||| | |||||||| |||| || ||||||||||||| || ||||||||||    
T  15087407 ttgagagagcttatgagatcttcaagactgagagtgtttagatctctaacttcctcaatagctgtcaccttaggtc 15087482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 13262287 - 13262360
Alignment:
Q  6 agagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||| ||||||| ||||||||| | |||||| ||||   |||||||||| |||| ||| |||||||||||    
T  13262287 agagagcttacaagatattcaacactgagagtgttcaaatagctagcttcctctatagaagttaccttaggtct 13262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 14908375 - 14908297
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14908375 ctttgagagagctgacaagatcttcaacacttaaagtgttaaaatctttagcttcctcaatagcagtaaccttaggtct 14908297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 16029471 - 16029547
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16029471 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcatcaatagcagtaaccttaggtct 16029547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18123353 - 18123275
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  18123353 ctttgagagagttaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 18123275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5211136 - 5211214
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  5211136 ctttgagagagctgacaagatcctcagcacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 5211214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11188454 - 11188532
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||    
T  11188454 ctttgagagagctatcaagatcttcaacatttgaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 11188532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2559653 - 2559725
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 73  Q
    ||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  2559653 ctttgagagagttgacaagatcttcaacacttaaagtgtttaaatcattagcttcctcaatagcagtcacctt 2559725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 14079015 - 14078939
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  14079015 ttgagagagctcataagatcttcaacacttaaagtgtttaaatctttagcttcctcaataacagtaactgtaggtct 14078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17244887 - 17244815
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 73  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  17244887 cttttagagagcttacaagatcttcaacacgtaaagtgtttaaatctttagcttcctcaataacagtaacctt 17244815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6183540 - 6183474
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  6183540 ctttgagtgagctaacaagatcttcaacacttaaagtatttaaatccttagcttcctcaatagcagt 6183474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9983462 - 9983396
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9983462 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatcattagcttcctcaatagcagt 9983396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10628522 - 10628456
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  10628522 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 10628456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13374242 - 13374176
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13374242 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 13374176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13384836 - 13384770
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13384836 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 13384770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16397594 - 16397528
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  16397594 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 16397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 53058421 - 53058343
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  53058421 ctttgagagagctgacaagattttcaacactcaaagtttttaaatctttagcttcctcaatagcagttacctttggtct 53058343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19886784 - 19886707
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtc 78  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||    
T  19886784 ctttgagagagctgacaatatcttcaacacttgaagtgtttaaatctctaggttcctcaatagcagtaaccttcggtc 19886707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4752982 - 4753048
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  4752982 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4753048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5538595 - 5538529
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  5538595 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5538529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5581207 - 5581141
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  5581207 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5581141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5867270 - 5867204
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  5867270 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5867204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6491920 - 6491854
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  6491920 ctttgagtgagctaacaagatcctcaacacttaaagtgtttagatccttagcttcctcaatagcagt 6491854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11273959 - 11273893
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  11273959 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11273893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12239192 - 12239126
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12239192 ctttgagtaagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 12239126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12288554 - 12288488
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  12288554 ctttgagtgagctaacaagatcctcaacacttaaagtgtttagatccttagcttcctcaatagcagt 12288488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14474884 - 14474950
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  14474884 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16392622 - 16392556
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  16392622 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16392556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19787685 - 19787751
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  19787685 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 19787751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23766557 - 23766623
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  23766557 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23766623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24385092 - 24385026
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  24385092 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24385026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24669133 - 24669199
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  24669133 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24669199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28315812 - 28315746
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  28315812 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 28315746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29462792 - 29462726
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  29462792 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 29462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38203915 - 38203981
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  38203915 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38203981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39381347 - 39381413
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  39381347 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39381413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41692912 - 41692978
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  41692912 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 41692978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 505736 - 505678
Alignment:
Q  9 gagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  505736 gagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 505678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5519531 - 5519597
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||    
T  5519531 ctttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 5519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8783926 - 8783992
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  8783926 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 8783992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13130933 - 13130999
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||    
T  13130933 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttccttaatagcagt 13130999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20674771 - 20674705
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  20674771 ctttgagtgaactaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 20674705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37875724 - 37875790
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  37875724 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 37875790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37884242 - 37884308
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  37884242 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 37884308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 9382224 - 9382172
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9382224 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 9382172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 12754345 - 12754281
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  12754345 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 12754281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 15847571 - 15847635
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  15847571 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 15847635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 17016452 - 17016516
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  17016452 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 17016516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7796195 - 7796129
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  7796195 ctttgagtgaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 7796129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11207669 - 11207603
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  11207669 ctttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 11207603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 16306701 - 16306624
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||| | ||||||||||||||||| |||  ||| ||| ||||||||||||||||||||  ||||||||||    
T  16306701 tttgagagagctgataagatcttcaacacttatagtacttagatccttagcttcctcaatagcagtctccttaggtct 16306624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 1785637 - 1785585
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  1785637 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 1785585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 4432437 - 4432489
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  4432437 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 4432489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 8997511 - 8997459
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  8997511 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 8997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 13263233 - 13263181
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  13263233 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 13263181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 14312972 - 14312920
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  14312972 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 14312920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 29935123 - 29935071
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  29935123 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 29935071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 29984277 - 29984225
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  29984277 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 29984225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 1062812 - 1062864
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| || ||||||| ||| |||||||||||||| |||||    
T  1062812 acaagatcttcaacactcaaggtgtttagatccttagcttcctcaatggcagt 1062864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 15652667 - 15652623
Alignment:
Q  17 aagatcttcaacacttaaagtgtttaaatctttagcttcctcaat 61  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||    
T  15652667 aagatcttcaacactcaaagtgtttagatccttagcttcctcaat 15652623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 18696594 - 18696518
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| |  | || ||||||||| | |||||||||||  |||||||||||||||| |||||| ||| ||||    
T  18696594 ttgagagagcttatgaaatattcaacactcagagtgtttaaattcttagcttcctcaatagtagtaactttaagtct 18696518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 18613626 - 18613699
Alignment:
Q  6 agagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18613626 agagagcttacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 18613699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21196331 - 21196253
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  21196331 ctttgagagagctgacaagatcttcaacacttaaagtgttcaaatctttagcttcctcaatagcagtgaccttacgtct 21196253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17720326 - 17720391
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcag 66  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17720326 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcag 17720391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21126002 - 21125924
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||    
T  21126002 ctttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctcaatagcaatcacctttggtct 21125924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21207451 - 21207373
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||    
T  21207451 ctttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctcaatagcaatcacctttggtct 21207373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23023322 - 23023400
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||| |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  23023322 ctttaagagagctgacaagatcttcaacacttagagtgttcaaatctttagcttcctcaatagcagtcaccttaggtct 23023400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3180806 - 3180872
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  3180806 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3180872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4176507 - 4176573
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  4176507 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4176573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5641326 - 5641260
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  5641326 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5842409 - 5842475
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  5842409 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5842475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7516479 - 7516545
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  7516479 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 7516545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7691087 - 7691021
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  7691087 ctttgagtgaactaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 7691021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12615939 - 12615873
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  12615939 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12615873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12739733 - 12739799
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  12739733 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12739799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21876353 - 21876419
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  21876353 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 21876419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25449896 - 25449830
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  25449896 ctttgagagagctgataagatcttcaacactgaaagtgtttaaatctttagcttcctcaatggcagt 25449830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35639655 - 35639589
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  35639655 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 35639589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36238046 - 36237980
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36238046 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36237980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38093664 - 38093730
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  38093664 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38093730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38104290 - 38104356
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  38104290 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38104356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 47609552 - 47609486
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  47609552 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 47609486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51630808 - 51630742
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  51630808 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 51630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 22431580 - 22431524
Alignment:
Q  23 ttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  22431580 ttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 22431524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19186410 - 19186476
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||    
T  19186410 ctttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 19186476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20943222 - 20943276
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttc 55  Q
    |||||| ||| || |||||||||||||||| ||||||||||||||||||||||||    
T  20943222 ctttgatagacctgacaagatcttcaacacctaaagtgtttaaatctttagcttc 20943276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22017768 - 22017846
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||| || || ||||||| ||||||||| |||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  22017768 ctttgagggaactgacaagattttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 22017846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 9345234 - 9345310
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||   || ||||| |||||||| | |||||||||| ||| |||||||||||| |||||| ||||||||    
T  9345234 ttgagagagcttctaatatctttaacacttagaatgtttaaatccttaacttcctcaatagtagtaactttaggtct 9345310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 20874831 - 20874779
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| |||||||| ||||| |||||    
T  20874831 acaagatcttcaacactcaaagtgtttagatccttagcttcatcaatggcagt 20874779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 22958544 - 22958620
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| |  |||||||||| ||||| |||||||| |||| | ||||| |||||||  || |||||||||||    
T  22958544 ttgagagagcttatgagatcttcaagacttagagtgtttagatctctggcttcttcaatagttgtcaccttaggtct 22958620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 23976079 - 23976027
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagctt 54  Q
    |||||||||||| | ||||||||||| ||||| |||||||| || ||||||||    
T  23976079 tttgagagagcttataagatcttcaagacttagagtgtttagatatttagctt 23976027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7121 - 7199
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7121 ctttgagagagctgacaagatcatcaacacttaaattgtttaaatctttagcttcctcaatagcagtaaccttaggtct 7199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7110 - 7188
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  7110 ctttgagagagctgacaagatcttcaacacttaaagtgttcaaatatttagcttcctcaatagcagtaaccttaggtct 7188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 34506 - 34454
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  34506 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 34454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19448530 - 19448608
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19448530 ctttgagagggctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctgaatagcagtaaccttaggtct 19448608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19450524 - 19450602
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19450524 ctttgagagggctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctgaatagcagtaaccttaggtct 19450602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9114077 - 9114011
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9114077 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 9114011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17926239 - 17926317
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| |||| |||||||| ||||| |||||||||    
T  17926239 ctttgagagagctaacaagatctttaacacttaaagtgtttacatctttcgctttctcaatagaagtaaacttaggtct 17926317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26940857 - 26940919
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatag 63  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26940857 ctttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctcaatag 26940919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27502921 - 27502987
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27502921 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 27502987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28253152 - 28253086
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28253152 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 28253086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28331901 - 28331835
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28331901 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 28331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 26042813 - 26042878
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  26042813 tttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 26042878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3670661 - 3670727
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  3670661 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3670727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12718420 - 12718354
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  12718420 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12718354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25984694 - 25984760
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  25984694 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 25984760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26034637 - 26034703
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  26034637 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26874019 - 26874085
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  26874019 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26874085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27350962 - 27351028
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  27350962 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27351028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27383354 - 27383420
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  27383354 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccctagcttcctcaatagcagt 27383420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27411702 - 27411768
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  27411702 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27411768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27473738 - 27473804
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  27473738 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccctagcttcctcaatagcagt 27473804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32302630 - 32302564
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  32302630 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32302564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32963530 - 32963464
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  32963530 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32963464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 17447336 - 17447260
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||| || | ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||    
T  17447336 ttgagagaactcataagatcttcaacacttagaatgtttaaatccttagcttcctcaatagcagtaactttaggtct 17447260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12864148 - 12864214
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  12864148 ctttgagtgagctaacaagatcttcaaaacttaaagtatttagatccttagcttcctcaatagcagt 12864214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16958225 - 16958291
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  16958225 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 16958291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20031505 - 20031443
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatag 63  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  20031505 ctttgagtgaactaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatag 20031443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34808746 - 34808680
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  34808746 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttaggttcctcaatagcagt 34808680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 14054976 - 14054900
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||| || ||||||||||||||||| || ||||||| ||| |||||||||||||||||||| ||||| |||||    
T  14054976 ttgagagaacttacaagatcttcaacactcaacgtgtttagatccttagcttcctcaatagcagttacctttggtct 14054900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 13138067 - 13137991
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||| || | ||||||||||||| ||| ||||||||||||||||| ||| ||||||||| |||| ||||||||    
T  13138067 ttgagagaacttataagatcttcaacaattagagtgtttaaatctttagattcttcaatagcaataactttaggtct 13137991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 18553908 - 18553972
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||| || ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  18553908 ttgagagaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 18553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 22385239 - 22385303
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  22385239 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 22385303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25804285 - 25804349
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagca 65  Q
    ||||||| || || ||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  25804285 ctttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagca 25804349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 17610164 - 17610112
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  17610164 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 17610112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 22307424 - 22307476
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  22307424 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 22307476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 11204595 - 11204647
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||| | ||| |||||||||||||| |||||    
T  11204595 acaagatcttcaacactcaaagtgttcagatccttagcttcctcaatggcagt 11204647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 17062852 - 17062904
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||  || ||||||| ||| |||||||||||||| |||||    
T  17062852 acaagatcttcaacacacaaggtgtttagatccttagcttcctcaatggcagt 17062904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10662841 - 10662763
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  10662841 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctccatagcagtaacctaaggtct 10662763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10876986 - 10876908
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  10876986 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctccatagcagtaacctaaggtct 10876908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16852366 - 16852444
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  16852366 cttttagagagctgacaagatcttcaacacttaaagtgttcaaatctttagcttcctcaatagcagtcacctttggtct 16852444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5021413 - 5021479
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  5021413 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 5021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18065252 - 18065318
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18065252 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 18065318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17246028 - 17246100
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 73  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||||||||||| |||||    
T  17246028 ctttgagagagctgacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagtcacctt 17246100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 459840 - 459906
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  459840 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 459906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4989373 - 4989307
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  4989373 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttccccaatagcagt 4989307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10742176 - 10742110
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  10742176 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10742110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10955945 - 10955879
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  10955945 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10955879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 14905978 - 14905900
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||| |||||||||| ||||| |||||    
T  14905978 ctttgagagagctgacaagaacttcaacacttaaagtgttcaaatctttaccttccgcaatagcagtcacctttggtct 14905900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16265142 - 16265208
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  16265142 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16265208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17927376 - 17927442
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  17927376 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17927442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18131827 - 18131761
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  18131827 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 18131761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18754068 - 18754002
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  18754068 ctttgagtgagctaacaagatcctcaacacttaaagtgtttagatccttagcttcctcaatagcagt 18754002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19945916 - 19945850
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  19945916 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 19945850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22005694 - 22005760
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  22005694 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22005760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24649608 - 24649674
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  24649608 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24649674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27175351 - 27175417
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  27175351 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27175417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27665850 - 27665916
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  27665850 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27665916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30928071 - 30928005
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  30928071 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30928005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36027568 - 36027634
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36027568 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36027634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 49516814 - 49516880
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  49516814 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 49516880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16316004 - 16316070
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  16316004 ctttgagggaactgacaagatcttcaacactcaaagtgtttaaatccttagcttcctcaatagcagt 16316070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27816524 - 27816458
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  27816524 ctttgagtgagctaagaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27816458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40455938 - 40455872
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  40455938 ctttgagtgaactaacaagatcttcaacacttaacgtgtttagatccttagcttcctcaatagcagt 40455872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 55746830 - 55746764
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  55746830 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 55746764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 14837672 - 14837620
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14837672 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 14837620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 15195489 - 15195437
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  15195489 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 15195437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 3380793 - 3380845
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| || ||||||| ||| ||||||||||||||||||||    
T  3380793 acaagatcttcaacactcaaggtgtttagatccttagcttcctcaatagcagt 3380845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 13694720 - 13694793
Alignment:
Q  6 agagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||| | ||||||||||| ||||| |||  ||| ||||||||||||||||||||  || |||||||||||    
T  13694720 agagagcttataagatcttcaagacttagagtacttagatctttagcttcctcaatagttgtcaccttaggtct 13694793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 14712383 - 14712335
Alignment:
Q  19 gatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||| | ||| |||||||||||||| |||||    
T  14712383 gatcttcaacacttaaagtgttaagatccttagcttcctcaatggcagt 14712335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22783271 - 22783193
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  22783271 ctttgagagagctgacaagatcttcaacacttaaagtgcttaaatctttagcttcctcaatagcagtcaccttaggtct 22783193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 24842658 - 24842722
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24842658 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 24842722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21137555 - 21137633
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  21137555 cttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttggtct 21137633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 24723839 - 24723903
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24723839 acaagatcttcaacacttaaagtgtttaaatctttagcttactcaatagcagtaaccttaggtct 24723903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22254054 - 22254132
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  22254054 ctttgagagagctaacaagatcatcaacacttaaagtgtttaaatctttggcttccccaatagcagtcacctttggtct 22254132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28702866 - 28702794
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 73  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  28702866 ctttgagagagttgacaagatcttcaacactcaaagtgtttaaatctttaacttcctcaatagcagtcacctt 28702794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4219114 - 4219180
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  4219114 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4219180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9899167 - 9899101
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  9899167 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9899101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10276205 - 10276271
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  10276205 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10276271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11396766 - 11396700
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  11396766 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11396700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21163541 - 21163475
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21163541 ctttgagtgagctgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 21163475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22916454 - 22916388
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  22916454 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22916388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24329343 - 24329277
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  24329343 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27230657 - 27230723
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  27230657 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27230723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34791811 - 34791745
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  34791811 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 34791745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35262222 - 35262288
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  35262222 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 35262288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35272847 - 35272913
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  35272847 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 35272913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39171688 - 39171622
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  39171688 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39171622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40249827 - 40249893
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  40249827 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40249893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 10900141 - 10900065
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||| |||||| | ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| ||||||||    
T  10900141 ttgaaagagctcataagatcttcaacacttaaagtgtttaaatctctagtttcctcaatagcaataactttaggtct 10900065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 24303691 - 24303615
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||| || | ||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||    
T  24303691 ttgagagaacttataagatcttcaacacttagagtgtttaaatctttagcttcatcaataacagtaactttaggtct 24303615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 9764349 - 9764291
Alignment:
Q  9 gagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  9764349 gagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9764291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43091897 - 43091963
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| | ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  43091897 ctttgagtgtgctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 43091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43353648 - 43353714
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||    
T  43353648 ctttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 43353714  T

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Target: chr2; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 24416606 - 24416554
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  24416606 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 24416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 24574502 - 24574561
Alignment:
Q  20 atcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  24574502 atcttgaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttggtct 24574561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29253438 - 29253504
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||| || |||| ||| ||| ||||||||||||||||    
T  29253438 ctttgagtgagctaacaagatcttcaacacttaacgtatttagatccttaacttcctcaatagcagt 29253504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 21919703 - 21919626
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||| | ||||||||||||||||| |||||||| |||  |||||||||||||| || | || ||||||||    
T  21919703 tttgagagagcttataagatcttcaacacttagagtgtttagatccgtagcttcctcaataacaatcactttaggtct 21919626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 19304008 - 19303956
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  19304008 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 19303956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 26876200 - 26876252
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| || |||||    
T  26876200 acaagatcttcaacacttaaagtgtttagatccttagcttcctctatggcagt 26876252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 28722898 - 28722850
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatag 63  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  28722898 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatag 28722850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 25119979 - 25119919
Alignment:
Q  17 aagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| |||||  |||||||||||||||| ||||||||||| |||||| ||||||||    
T  25119979 aagatcttcaatactta--gtgtttaaatctttagattcctcaatagtagtaactttaggtct 25119919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 24803231 - 24803169
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggt 77  Q
    |||| |||||||||||| |||||||||||||| || ||||||||||| ||||| || ||||||    
T  24803231 acaaaatcttcaacactcaaagtgtttaaatccttggcttcctcaatggcagtcactttaggt 24803169  T

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Target: scaffold0161 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 11721 - 11645
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  11721 ttgagaaagctgacaagatcttcaacacttcaagtttttaaatctttagcttcctcaatagcagtaaccttaggtct 11645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 16394 - 16318
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  16394 ttgagaaagctgacaagatcttcaacacttcaagtttttaaatctttagcttcctcaatagcagtaaccttaggtct 16318  T

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Target: scaffold0056 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27302 - 27224
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  27302 ctttgagagagccgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagtagtcacctttggtct 27224  T

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Target: scaffold0359 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 7337 - 7260
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  7337 tttgagagagctgacaagattttcaacacttaaagtgtttaaatatttagcttcctcaatagcagtcacctttggtct 7260  T

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Target: scaffold0217 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17573 - 17645
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 73  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  17573 cttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagaagtcacctt 17645  T

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Target: scaffold0038 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 53352 - 53286
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  53352 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 53286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 111253 - 111175
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  111253 ctttgagagagctgacaatatcctcaacacttaaagtgtttaaatctttaggttcctcaatagcagtcacctttggtct 111175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 209859 - 209937
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||    
T  209859 ctttgagagagctgacaagatcctcaacacttaaagtgtttaaatctttagcttaatcaatagcagtcacctttggtct 209937  T

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Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21200699 - 21200621
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||| |||||| | |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  21200699 ctttaagagagttgacaagatctttaacacttaaagtgtttagatgtttagcttcctcaatagcagtaaccttaggtct 21200621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26782878 - 26782956
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||| |||||    
T  26782878 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttccaaaataacagtcacctttggtct 26782956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31420362 - 31420296
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  31420362 ctttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 31420296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5299706 - 5299772
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  5299706 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5299772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6977503 - 6977437
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  6977503 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 6977437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9337651 - 9337585
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  9337651 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9337585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14031739 - 14031673
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  14031739 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14031673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14456176 - 14456242
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  14456176 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14456242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14567217 - 14567283
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  14567217 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14567283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15741666 - 15741600
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  15741666 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 15741600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16002460 - 16002526
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  16002460 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16002526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17608759 - 17608693
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  17608759 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17608693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17720615 - 17720549
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  17720615 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17720549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22148213 - 22148147
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  22148213 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22148147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22677813 - 22677747
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  22677813 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22677747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23297974 - 23297908
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  23297974 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23297908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23363793 - 23363727
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  23363793 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23363727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23394106 - 23394040
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23394106 ctttgagggaactgacaagatcttcaacacttaaagtgtttaaatccttagcttcctcaatagcagt 23394040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23698477 - 23698411
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  23698477 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23698411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24568785 - 24568719
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  24568785 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24568719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26763914 - 26763992
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||| | |||||||| | |||||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  26763914 ctttgagagagttgacaagatccttaacacttaaagtgtttaaatctttagcttcctcaatagcaatcacctttggtct 26763992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27051401 - 27051467
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  27051401 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27461859 - 27461793
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  27461859 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27461793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30236590 - 30236656
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  30236590 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31350231 - 31350165
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  31350231 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 31350165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31835177 - 31835111
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  31835177 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 31835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34773606 - 34773540
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  34773606 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 34773540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35217200 - 35217134
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  35217200 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 35217134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36591681 - 36591747
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36591681 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36591747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36689395 - 36689329
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36689395 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36689329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39354193 - 39354127
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  39354193 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39354127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39500051 - 39500117
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  39500051 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39500117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40392055 - 40391989
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  40392055 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42044477 - 42044411
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  42044477 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 42044411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 11209690 - 11209614
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||| || ||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  11209690 ttgagagaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcaccttaggtct 11209614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1120466 - 1120532
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| | | ||||||||||||||||||||    
T  1120466 ctttgagtgagctaacaagatcttcaacacttaaagtatttagacccttagcttcctcaatagcagt 1120532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24826039 - 24826105
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  24826039 ctttgagtgagcgaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24826105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24981974 - 24982040
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  24981974 ctttgagggaactgacaagatcttcaacactcaaagtgtttaaatccttagcttcctcaatagcagt 24982040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27621336 - 27621402
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| |||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||    
T  27621336 ctttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 27621402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37739131 - 37739197
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  37739131 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 37739197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 19465667 - 19465603
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  19465667 ttgagggaactaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 19465603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 20553510 - 20553446
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  20553510 ttgagggaactaacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 20553446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 23487072 - 23487136
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  23487072 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 23487136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 24809605 - 24809547
Alignment:
Q  9 gagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||    
T  24809605 gagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 24809547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34053657 - 34053591
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||| || ||||||||||||||||| || ||||||| ||| ||||||||||||||||||||    
T  34053657 ctttgagagaactgacaagatcttcaacactcaaggtgtttagatccttagcttcctcaatagcagt 34053591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43620458 - 43620524
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || |||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  43620458 ctttgagtgaactaacaggatcttcaacacttaaagtgtttagatccttagcttcctcgatagcagt 43620524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 17455891 - 17455943
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  17455891 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 17455943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 25113581 - 25113517
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||| ||||||||| |||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  25113581 acaagatattcaacactcaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 25113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 25172672 - 25172608
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||| ||||||||| |||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  25172672 acaagatattcaacactcaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 25172608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 21704542 - 21704588
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaat 61  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  21704542 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaat 21704588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 13532446 - 13532492
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaat 61  Q
    |||||||| |||||||| |||||||||| ||| ||||||||||||||    
T  13532446 acaagatcctcaacactcaaagtgtttagatccttagcttcctcaat 13532492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 12408 - 12472
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  12408 ttgagagagctgacaagatcttcaacacttaaagtgtttaagtctttagcttcctctatagcagt 12472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2692 - 2752
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaat 61  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  2692 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatatttagcttcctcaat 2752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38572 - 38506
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  38572 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47770 - 47847
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||||||| ||||| |||||    
T  47770 ctttgagagagctaacatgatcatcaacact-aatgtgtttaaatctttagcttcctcaatagcagtcacctttggtct 47847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 67034 - 66956
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||||||||||| | ||||| |||||    
T  67034 ctttgagagagctgacaagatcctcaacacttaaggtgtttaaatctctagcttcctcaatagcaatcacctttggtct 66956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 166305 - 166241
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||||||| |||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  166305 acaagatcttcaacactcaaagtgtttagatccttagcttcttcaatggcagtaaccttaggtct 166241  T

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Target: scaffold0498 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 1842 - 1782
Alignment:
Q  3 ttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatag 63  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1842 ttgagagagttgacaagatcttcaacacttaaaatgtttaaatctttagcttcctcaatag 1782  T

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Target: scaffold1820 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 96 - 160
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  96 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcaccttaggtct 160  T

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Target: scaffold1507 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 997 - 919
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||| || || ||||||||||||||||| |||||||||| ||| ||| |||||||||||||||| || ||||||||    
T  997 ctttgagggaactgacaagatcttcaacactcaaagtgtttagatccttaacttcctcaatagcagttactttaggtct 919  T

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Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3126 - 3060
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  3126 ctttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 3060  T

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Target: scaffold0211 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 1160 - 1083
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||| || || ||||||| ||||||||| |||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  1160 tttgagggaactgacaagattttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcaccttaggtct 1083  T

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Target: scaffold0211; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 1293 - 1229
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||| ||||||||| |||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  1293 acaagattttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcaccttaggtct 1229  T

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Target: scaffold0116 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 22561 - 22512
Alignment:
Q  30 cttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  22561 cttaaagtgtttaaatttttagcttccttaatagcagtaaccttaggtct 22512  T

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Target: scaffold0116; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 25741 - 25711
Alignment:
Q  3 ttgagagagctaacaagatcttcaacactta 33  Q
    |||||||||||||||||||||||||||||||    
T  25741 ttgagagagctaacaagatcttcaacactta 25711  T

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Target: scaffold0925 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0925
Description:

Target: scaffold0925; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 3830 - 3766
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| || ||||||||    
T  3830 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcactttaggtct 3766  T

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Target: scaffold0758 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 2807 - 2883
Alignment:
Q  2 tttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtc 78  Q
    |||||||||||| |  |||||||| ||||||| |||||||| ||| |||||||||||||||||||| || |||||||    
T  2807 tttgagagagcttatgagatcttcgacacttagagtgtttagatccttagcttcctcaatagcagtcactttaggtc 2883  T

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Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 75726 - 75796
Alignment:
Q  10 agctaacaagatcttcaacacttaaa-gtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||||| | |||||||||||| ||| ||||    
T  75726 agcttacaagatcttcaacactcaaaagtgtttaaatctttagcttctttaatagcagtaactttatgtct 75796  T

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Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44804 - 44738
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || |||||||||||||||||||||||||||| ||| |||||||||| ||| |||||    
T  44804 ctttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttccttaatggcagt 44738  T

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Target: scaffold0017; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 55107 - 55041
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||| || || |||||||||||||||||||||||||||| ||| |||||||||| ||| |||||    
T  55107 ctttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttccttaatggcagt 55041  T

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Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43369 - 43324
Alignment:
Q  1 ctttgagagagctaacaagatcttcaacacttaaagtgtttaaatc 46  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  43369 ctttgagagagctgacaagatcttaaacacttaaagtgtttaaatc 43324  T

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Target: scaffold0272 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 23901 - 23953
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||    
T  23901 acaagatcttcaacactaaaagtatttagatccttagcttcctcaatagcagt 23953  T

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Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 3951 - 4003
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  3951 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 4003  T

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Target: scaffold0443 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 2609 - 2563
Alignment:
Q  21 tcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  2609 tcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 2563  T

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Target: scaffold0068 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 9368 - 9322
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaat 61  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  9368 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaat 9322  T

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Target: scaffold0185 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 31755 - 31807
Alignment:
Q  15 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagt 67  Q
    |||||||||||||||||||||||||| | ||| ||| |||||||||| |||||    
T  31755 acaagatcttcaacacttaaagtgttaagatccttaacttcctcaatggcagt 31807  T

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Target: scaffold0043 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 3350 - 3288
Alignment:
Q  17 aagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||||||| ||| |||| ||| | | |||||||||||| ||| |||||||||||    
T  3350 aagatcttcaacacttagagtatttagatcatcaacttcctcaatagaagtcaccttaggtct 3288  T

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Target: scaffold0382 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 2894 - 2829
Alignment:
Q  15 acaagatcttcaacacttaaagtg-tttaaatctttagcttcctcaatagcagtaaccttaggtct 79  Q
    ||||||||||||||||| |||||| |||| ||| |||| ||||||||| ||||| || ||||||||    
T  2894 acaagatcttcaacactcaaagtgttttagatccttagattcctcaatggcagtcactttaggtct 2829  T

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