View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21455_low_5 (Length: 504)

Name: NF21455_low_5
Description: NF21455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21455_low_5
NF21455_low_5
[»] chr5 (43 HSPs)
chr5 (17-488)||(35992076-35992547)
chr5 (404-470)||(29695008-29695074)
chr5 (396-465)||(37614421-37614490)
chr5 (404-460)||(12159403-12159459)
chr5 (404-471)||(8882401-8882468)
chr5 (403-466)||(23118052-23118115)
chr5 (391-469)||(22522790-22522868)
chr5 (404-469)||(15889405-15889470)
chr5 (406-463)||(16076431-16076488)
chr5 (408-469)||(20175821-20175882)
chr5 (417-469)||(1512849-1512901)
chr5 (403-467)||(17230382-17230446)
chr5 (405-469)||(17708068-17708132)
chr5 (400-468)||(17861974-17862042)
chr5 (406-470)||(32200451-32200515)
chr5 (189-252)||(31165872-31165935)
chr5 (391-469)||(6489001-6489079)
chr5 (391-469)||(11720888-11720965)
chr5 (408-462)||(31159430-31159484)
chr5 (403-469)||(37054270-37054336)
chr5 (408-462)||(43108570-43108624)
chr5 (417-466)||(8545004-8545053)
chr5 (408-469)||(11637578-11637639)
chr5 (396-469)||(18430994-18431067)
chr5 (404-469)||(18789030-18789095)
chr5 (396-465)||(25979842-25979911)
chr5 (404-469)||(27219282-27219347)
chr5 (404-469)||(34436845-34436910)
chr5 (404-469)||(35270683-35270748)
chr5 (396-469)||(38283058-38283130)
chr5 (403-440)||(39963516-39963553)
chr5 (404-469)||(40715951-40716016)
chr5 (417-469)||(4432110-4432162)
chr5 (417-469)||(5001549-5001601)
chr5 (423-471)||(5485178-5485226)
chr5 (417-469)||(8642361-8642413)
chr5 (419-463)||(9123862-9123906)
chr5 (405-469)||(19248473-19248537)
chr5 (415-447)||(28498602-28498634)
chr5 (417-469)||(30893927-30893979)
chr5 (408-465)||(31114657-31114716)
chr5 (417-465)||(33654746-33654794)
chr5 (417-469)||(40445977-40446029)
[»] chr3 (41 HSPs)
chr3 (134-269)||(32273319-32273454)
chr3 (404-470)||(7464493-7464559)
chr3 (398-469)||(46903902-46903973)
chr3 (402-466)||(2078237-2078301)
chr3 (404-464)||(7651185-7651245)
chr3 (423-468)||(11508504-11508549)
chr3 (404-469)||(16792976-16793041)
chr3 (396-469)||(18870719-18870792)
chr3 (412-469)||(28918900-28918957)
chr3 (392-465)||(43777047-43777119)
chr3 (417-469)||(7827502-7827554)
chr3 (417-469)||(7829890-7829942)
chr3 (405-469)||(16980357-16980421)
chr3 (406-469)||(7738663-7738726)
chr3 (423-470)||(31138410-31138457)
chr3 (404-463)||(48209213-48209272)
chr3 (423-469)||(376640-376686)
chr3 (403-469)||(32753822-32753888)
chr3 (415-469)||(33223862-33223916)
chr3 (419-469)||(33633335-33633385)
chr3 (391-469)||(38130948-38131026)
chr3 (423-469)||(38387966-38388012)
chr3 (403-469)||(41168139-41168205)
chr3 (403-469)||(42372514-42372580)
chr3 (404-469)||(2563923-2563988)
chr3 (417-470)||(8075778-8075831)
chr3 (404-469)||(8127457-8127522)
chr3 (408-469)||(21331423-21331484)
chr3 (420-469)||(22462306-22462355)
chr3 (416-465)||(29791774-29791823)
chr3 (416-469)||(48376829-48376882)
chr3 (391-468)||(49097267-49097344)
chr3 (404-469)||(51882202-51882267)
chr3 (408-469)||(53633623-53633684)
chr3 (417-469)||(7824801-7824853)
chr3 (404-464)||(10922310-10922370)
chr3 (405-461)||(17755123-17755179)
chr3 (405-461)||(19056443-19056499)
chr3 (408-468)||(20370287-20370347)
chr3 (405-461)||(24521650-24521706)
chr3 (401-469)||(49975804-49975872)
[»] chr1 (49 HSPs)
chr1 (396-469)||(30678807-30678880)
chr1 (391-469)||(7925358-7925435)
chr1 (392-469)||(26755610-26755687)
chr1 (404-463)||(13401597-13401656)
chr1 (403-469)||(1091173-1091239)
chr1 (396-469)||(16033444-16033517)
chr1 (396-469)||(17669639-17669712)
chr1 (417-470)||(36371055-36371108)
chr1 (417-469)||(6219877-6219929)
chr1 (422-469)||(15729424-15729471)
chr1 (418-464)||(10292935-10292981)
chr1 (403-465)||(39252258-39252320)
chr1 (404-469)||(27449447-27449512)
chr1 (404-469)||(27533237-27533302)
chr1 (404-469)||(33153882-33153947)
chr1 (417-469)||(1579407-1579459)
chr1 (417-469)||(3693811-3693863)
chr1 (416-464)||(11241999-11242047)
chr1 (417-469)||(36672729-36672781)
chr1 (409-449)||(51241504-51241544)
chr1 (415-466)||(50849086-50849137)
chr1 (416-466)||(3573338-3573388)
chr1 (417-463)||(10059533-10059579)
chr1 (404-458)||(15670644-15670698)
chr1 (431-469)||(18091197-18091235)
chr1 (417-471)||(21400038-21400092)
chr1 (404-470)||(44243866-44243932)
chr1 (403-469)||(49222810-49222876)
chr1 (404-469)||(11701960-11702025)
chr1 (404-469)||(16924472-16924537)
chr1 (396-465)||(16967188-16967257)
chr1 (404-469)||(17139519-17139584)
chr1 (400-465)||(23045189-23045254)
chr1 (408-469)||(29506821-29506882)
chr1 (396-469)||(40162798-40162870)
chr1 (420-469)||(41573287-41573336)
chr1 (400-449)||(42372788-42372837)
chr1 (396-468)||(422542-422614)
chr1 (408-468)||(2613717-2613777)
chr1 (417-465)||(2889941-2889989)
chr1 (400-440)||(3248800-3248840)
chr1 (417-469)||(3528484-3528536)
chr1 (417-469)||(4770643-4770695)
chr1 (417-469)||(10480708-10480760)
chr1 (405-465)||(24978242-24978302)
chr1 (417-469)||(41142701-41142753)
chr1 (432-468)||(44220982-44221018)
chr1 (417-469)||(48131243-48131295)
chr1 (417-469)||(52441526-52441578)
[»] chr2 (45 HSPs)
chr2 (404-468)||(38904056-38904120)
chr2 (381-469)||(30243244-30243332)
chr2 (417-467)||(27412851-27412901)
chr2 (405-474)||(27244646-27244715)
chr2 (404-469)||(44694682-44694747)
chr2 (393-440)||(9391755-9391802)
chr2 (404-462)||(5168581-5168639)
chr2 (404-466)||(20990906-20990968)
chr2 (404-466)||(31815889-31815951)
chr2 (391-469)||(35820290-35820368)
chr2 (396-469)||(1861803-1861876)
chr2 (404-469)||(11560492-11560557)
chr2 (404-469)||(29896296-29896361)
chr2 (392-465)||(40967361-40967434)
chr2 (417-469)||(7206119-7206171)
chr2 (403-439)||(9384759-9384795)
chr2 (417-469)||(28202291-28202343)
chr2 (405-469)||(44026602-44026666)
chr2 (395-474)||(5028845-5028924)
chr2 (431-470)||(24033730-24033769)
chr2 (391-449)||(35458775-35458834)
chr2 (396-466)||(8043973-8044043)
chr2 (391-469)||(10735820-10735898)
chr2 (404-466)||(20565077-20565139)
chr2 (408-469)||(28644519-28644581)
chr2 (391-469)||(33063980-33064058)
chr2 (404-462)||(36359315-36359373)
chr2 (415-469)||(37320530-37320584)
chr2 (404-457)||(145013-145066)
chr2 (392-465)||(4927439-4927512)
chr2 (404-469)||(5676733-5676798)
chr2 (408-469)||(6723083-6723144)
chr2 (417-466)||(13394997-13395046)
chr2 (393-469)||(14414883-14414962)
chr2 (396-465)||(21497665-21497734)
chr2 (408-469)||(24548111-24548172)
chr2 (417-470)||(34977197-34977250)
chr2 (417-469)||(2256965-2257017)
chr2 (405-469)||(4509531-4509595)
chr2 (404-468)||(9064591-9064655)
chr2 (405-469)||(22571868-22571932)
chr2 (417-465)||(22608525-22608573)
chr2 (406-466)||(31166111-31166171)
chr2 (396-440)||(41542977-41543021)
chr2 (405-469)||(41682391-41682454)
[»] chr6 (40 HSPs)
chr6 (396-470)||(16390422-16390496)
chr6 (396-469)||(331880-331953)
chr6 (396-469)||(19277568-19277641)
chr6 (409-464)||(6470623-6470678)
chr6 (412-467)||(14552333-14552388)
chr6 (404-463)||(14945515-14945574)
chr6 (403-469)||(2105899-2105965)
chr6 (419-469)||(7281415-7281465)
chr6 (408-469)||(12841883-12841945)
chr6 (404-465)||(8840522-8840583)
chr6 (396-469)||(32053782-32053855)
chr6 (396-444)||(4826309-4826357)
chr6 (417-469)||(12412271-12412323)
chr6 (391-463)||(14585164-14585236)
chr6 (403-463)||(23635715-23635775)
chr6 (404-476)||(24623319-24623391)
chr6 (396-468)||(28951394-28951466)
chr6 (416-463)||(2617219-2617266)
chr6 (391-466)||(10018397-10018471)
chr6 (403-466)||(29283812-29283875)
chr6 (416-470)||(12204362-12204416)
chr6 (404-466)||(32524422-32524484)
chr6 (404-469)||(788860-788925)
chr6 (395-468)||(1989036-1989108)
chr6 (417-470)||(7081669-7081722)
chr6 (408-469)||(8381200-8381261)
chr6 (404-465)||(8629698-8629759)
chr6 (396-437)||(12459735-12459776)
chr6 (404-469)||(12735245-12735310)
chr6 (404-469)||(13496110-13496175)
chr6 (417-462)||(21941474-21941519)
chr6 (401-462)||(24212538-24212599)
chr6 (404-469)||(24349538-24349603)
chr6 (404-469)||(24373712-24373777)
chr6 (396-469)||(26356075-26356148)
chr6 (412-469)||(31140822-31140879)
chr6 (408-464)||(4450261-4450317)
chr6 (405-469)||(13036481-13036545)
chr6 (417-469)||(18256877-18256929)
chr6 (404-468)||(32409181-32409244)
[»] chr7 (40 HSPs)
chr7 (404-469)||(22267575-22267640)
chr7 (403-463)||(23221392-23221452)
chr7 (403-469)||(36755009-36755074)
chr7 (403-469)||(36760806-36760871)
chr7 (417-471)||(46551987-46552041)
chr7 (404-469)||(7388041-7388106)
chr7 (404-469)||(34448612-34448677)
chr7 (396-469)||(42829228-42829301)
chr7 (400-467)||(25246767-25246834)
chr7 (405-464)||(34000261-34000320)
chr7 (403-469)||(48103675-48103741)
chr7 (404-469)||(4047780-4047844)
chr7 (416-469)||(16355507-16355560)
chr7 (417-470)||(40187651-40187704)
chr7 (404-469)||(43539106-43539171)
chr7 (417-469)||(24839482-24839534)
chr7 (414-470)||(44454505-44454561)
chr7 (423-466)||(3948051-3948094)
chr7 (415-466)||(8879760-8879811)
chr7 (419-469)||(964758-964808)
chr7 (396-469)||(19793798-19793872)
chr7 (404-469)||(3830062-3830127)
chr7 (404-469)||(4227530-4227595)
chr7 (413-470)||(5317299-5317356)
chr7 (404-465)||(10242479-10242539)
chr7 (404-469)||(10244721-10244786)
chr7 (404-469)||(19626527-19626592)
chr7 (416-457)||(19684226-19684267)
chr7 (404-465)||(21597678-21597739)
chr7 (404-469)||(29726794-29726859)
chr7 (404-469)||(35222918-35222983)
chr7 (420-465)||(35666301-35666346)
chr7 (424-469)||(36803832-36803877)
chr7 (416-469)||(38911293-38911346)
chr7 (404-465)||(39926540-39926601)
chr7 (408-457)||(45425459-45425508)
chr7 (417-469)||(1399156-1399208)
chr7 (416-468)||(15913546-15913598)
chr7 (404-464)||(25251509-25251569)
chr7 (408-464)||(32315222-32315278)
[»] chr4 (49 HSPs)
chr4 (405-469)||(2932117-2932181)
chr4 (403-469)||(41520948-41521014)
chr4 (404-466)||(54500566-54500628)
chr4 (396-469)||(19332295-19332368)
chr4 (404-469)||(39171372-39171437)
chr4 (404-469)||(50362141-50362206)
chr4 (404-470)||(20799396-20799462)
chr4 (408-458)||(50650933-50650983)
chr4 (417-466)||(6459939-6459988)
chr4 (396-469)||(7230274-7230347)
chr4 (398-468)||(14136086-14136158)
chr4 (404-469)||(14202481-14202546)
chr4 (404-469)||(21318255-21318320)
chr4 (404-469)||(21449900-21449965)
chr4 (404-469)||(23809943-23810008)
chr4 (404-469)||(43722759-43722824)
chr4 (403-460)||(56096207-56096264)
chr4 (396-468)||(32006495-32006567)
chr4 (416-468)||(39842026-39842078)
chr4 (403-463)||(52936641-52936701)
chr4 (423-470)||(12712039-12712086)
chr4 (403-462)||(17423178-17423237)
chr4 (402-465)||(49952569-49952632)
chr4 (391-470)||(54857604-54857683)
chr4 (404-462)||(10336988-10337046)
chr4 (404-466)||(14197433-14197495)
chr4 (403-461)||(39146644-39146702)
chr4 (404-462)||(48171882-48171940)
chr4 (415-457)||(49233808-49233850)
chr4 (420-465)||(6094195-6094240)
chr4 (417-466)||(17134122-17134171)
chr4 (396-469)||(21266876-21266949)
chr4 (404-465)||(21317340-21317401)
chr4 (403-440)||(22411787-22411824)
chr4 (404-469)||(30893431-30893495)
chr4 (417-470)||(43034357-43034410)
chr4 (404-469)||(43374274-43374339)
chr4 (423-468)||(45970728-45970773)
chr4 (416-469)||(51002281-51002334)
chr4 (417-469)||(7030908-7030960)
chr4 (417-469)||(13276123-13276175)
chr4 (408-468)||(19594231-19594291)
chr4 (417-469)||(21935006-21935058)
chr4 (403-466)||(27550734-27550798)
chr4 (417-469)||(32223727-32223779)
chr4 (417-469)||(36203230-36203282)
chr4 (417-469)||(40160792-40160844)
chr4 (423-463)||(40847088-40847128)
chr4 (404-460)||(44909827-44909883)
[»] chr8 (32 HSPs)
chr8 (404-465)||(3650518-3650579)
chr8 (415-468)||(28084277-28084330)
chr8 (417-466)||(42700502-42700551)
chr8 (391-471)||(27587213-27587293)
chr8 (403-469)||(7553673-7553739)
chr8 (391-469)||(13357430-13357508)
chr8 (404-466)||(18422455-18422517)
chr8 (400-469)||(574378-574447)
chr8 (417-466)||(1877677-1877726)
chr8 (424-469)||(8837914-8837959)
chr8 (396-469)||(29293171-29293244)
chr8 (417-469)||(17062354-17062406)
chr8 (417-469)||(17585952-17586004)
chr8 (391-439)||(32285760-32285808)
chr8 (417-469)||(37015851-37015903)
chr8 (403-470)||(27718895-27718962)
chr8 (404-469)||(8999893-8999959)
chr8 (423-469)||(32223900-32223946)
chr8 (419-469)||(44293569-44293619)
chr8 (392-465)||(3456812-3456884)
chr8 (404-469)||(3672618-3672683)
chr8 (417-470)||(11708979-11709032)
chr8 (404-469)||(39821878-39821943)
chr8 (396-440)||(5179816-5179860)
chr8 (391-471)||(6471503-6471583)
chr8 (417-469)||(11771701-11771753)
chr8 (416-464)||(15079166-15079214)
chr8 (417-469)||(21557427-21557479)
chr8 (404-440)||(26932765-26932801)
chr8 (404-440)||(32115408-32115444)
chr8 (396-440)||(37141380-37141424)
chr8 (417-469)||(41388673-41388725)
[»] scaffold0016 (1 HSPs)
scaffold0016 (403-469)||(99031-99097)
[»] scaffold1149 (1 HSPs)
scaffold1149 (404-465)||(2330-2391)
[»] scaffold0027 (1 HSPs)
scaffold0027 (391-469)||(61559-61637)
[»] scaffold0017 (1 HSPs)
scaffold0017 (404-466)||(35930-35992)
[»] scaffold0021 (1 HSPs)
scaffold0021 (404-469)||(161135-161200)
[»] scaffold0011 (1 HSPs)
scaffold0011 (404-441)||(189974-190011)
[»] scaffold1063 (1 HSPs)
scaffold1063 (417-465)||(1075-1123)
[»] scaffold0312 (1 HSPs)
scaffold0312 (396-468)||(7958-8030)
[»] scaffold0238 (1 HSPs)
scaffold0238 (408-464)||(25388-25444)
[»] scaffold0126 (1 HSPs)
scaffold0126 (408-464)||(34894-34950)


Alignment Details
Target: chr5 (Bit Score: 408; Significance: 0; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 17 - 488
Target Start/End: Complemental strand, 35992547 - 35992076
Alignment:
Q  17 atgaaatcataaagaaaatgaaattatgagatatgtttgtccttttctttttagacaaagattatgttcatgatggagatggtttaactgtgaaaataat 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35992547 atgaaatcataaagaaaatgaaattatgagatatgtttgtctttttctttttagacaaagattatgttcatgatggagatggtttaactgtgaaaataat 35992448  T
Q  117 tatgatgattattgttaattaggggaatggtgggatgcaaaccctattgatgttgtgagacaagccacacaaacaggagcagctccaaatatatctgatg 216  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35992447 tatgatgattattattaattaggggaatggtgggatgcaaaccctattgatgttgtgagacaagccacacaaacaggagcagctccaaatatatctgatg 35992348  T
Q  217 catacactattaatggtcaacctggtgatctttacaagtgctctagcaaaggtttgattattttctcttattttttaattttgagtagnnnnnnnnagtg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||    
T  35992347 catacactattaatggtcaacctggtgatctttacaagtgctctagcaaaggtttgattattttctcttattttttaattttgagtagttttttttagtg 35992248  T
Q  317 aactcattatcaacatgtcacatataagattttttataaaatatatattcaaaatatactatagtcaaatattcggtgatggccgaagtttgaaccctga 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  35992247 aactcattatcaacatgtcacatataagattttttataaaatatatattcaaaatatactatagtcaaatattcgatgatggccgaagtttgaactctga 35992148  T
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacctgaattgtacatactaat 488  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| || | ||||||||||| ||||||||||    
T  35992147 accttacatatatcatgcattgtctctatcaactgagctaagcttacaatgacctgaattgcacatactaat 35992076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 29695074 - 29695008
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||||||||  ||||||||||||||| ||||||||||  ||||||| |||||||| |||||||||||    
T  29695074 gtttgaaccacgaaccttacatatattatgcattgtccatatcaactgagttaaggtcacgaggacc 29695008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 37614421 - 37614490
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||||||||||  ||||||| ||||||| |||| ||||||||| |||| ||| |||||||||||    
T  37614421 tggccgaagtttgaacctcgaaccttgcatatattatgcgttgtctctaccaactgagctaagctcacga 37614490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 12159403 - 12159459
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagct 460  Q
    ||||||| |||||||||||||||||| || ||||||||||| |||| ||||||||||    
T  12159403 gtttgaatcctgaaccttacatatattatacattgtctctaccaactgagttaagct 12159459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 8882401 - 8882468
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacct 471  Q
    |||||||||| | ||||||||||||| ||||| ||||  ||||||| |||||||||||||| ||||||    
T  8882401 gtttgaaccccggaccttacatatattatgcactgtcattatcaactgagttaagctcacggggacct 8882468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 23118052 - 23118115
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||| ||||||  |||||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  23118052 agttcgaaccccaaaccttacatatattatgcattgtccttatcaactgagttaagctcacgag 23118115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 469
Target Start/End: Original strand, 22522790 - 22522868
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||  |||||||||| | ||||| ||||||| ||||||||||  || |||||||| |||||||||||||||    
T  22522790 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaaccgagctaagctcacgaggac 22522868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 15889470 - 15889405
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||  ||||| ||||||| |||||||||| ||| |||| ||| |||||||||||||||    
T  15889470 gtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 15889405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 16076488 - 16076431
Alignment:
Q  406 ttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    |||||||||||||||| ||||||| ||||||||||  ||||| | |||||||||||||    
T  16076488 ttgaaccctgaaccttgcatatattatgcattgtccatatcagctgagttaagctcac 16076431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 469
Target Start/End: Complemental strand, 20175882 - 20175821
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||| ||| ||||| | |||||||||||||| |||| |||||||||||||||||||    
T  20175882 gaaccccgaatcttgcatattttatgcattgtctctaacaactgagttaagctcacgaggac 20175821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 1512901 - 1512849
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| |||||||||| |||  ||| |||||||||||||||||||    
T  1512901 accttacatatattatgcattgtccctactaactgagttaagctcacgaggac 1512849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 467
Target Start/End: Complemental strand, 17230446 - 17230382
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagg 467  Q
    ||||||||| | ||| ||||||||||| ||||||||||||| ||||| ||| |||| ||||||||    
T  17230446 agtttgaactccgaatcttacatatattatgcattgtctctgtcaactgagctaagatcacgagg 17230382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 17708132 - 17708068
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||||||||| ||||| | ||||||||||  ||||||| |||||| ||||||||||||    
T  17708132 tttgaactctgaaccttgcatattttatgcattgtccatatcaactgagttatgctcacgaggac 17708068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 468
Target Start/End: Complemental strand, 17862042 - 17861974
Alignment:
Q  400 cgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||| |||||||||||||| || ||||||| |||||||||| ||| |||| ||| ||| ||||||||||    
T  17862042 cgaaatttgaaccctgaactttgcatatattatgcattgtccctaccaactgagctaaactcacgagga 17861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 32200451 - 32200515
Alignment:
Q  406 ttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||||||| | ||||| ||||||| |||||||||| || ||||| ||| ||||||||||||||||    
T  32200451 ttgaaccccggaccttgcatatattatgcattgtccctgtcaactgagctaagctcacgaggacc 32200515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 31165935 - 31165872
Alignment:
Q  189 acaggagcagctccaaatatatctgatgcatacactattaatggtcaacctggtgatctttaca 252  Q
    ||||||||| |||||||| |||||| ||||||||| || ||||||||||| || ||||| ||||    
T  31165935 acaggagcacctccaaatgtatctgttgcatacaccatgaatggtcaaccgggagatctctaca 31165872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 469
Target Start/End: Complemental strand, 6489079 - 6489001
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||  ||||||||||   ||||| ||||||| |||||||||| ||| |||| ||| |||||||||||||||    
T  6489079 ggtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 6489001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 469
Target Start/End: Complemental strand, 11720965 - 11720888
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||  |||||||||| || |||| ||||||| |||||||||| ||| |||| ||||||||||||| |||||    
T  11720965 ggtggtggccggggtttgaaccccga-ccttgcatatattatgcattgtccctaccaactgagttaagctcacaaggac 11720888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 462
Target Start/End: Complemental strand, 31159484 - 31159430
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    |||||||||| ||| ||||||| ||| ||||||| ||||||| ||||||||||||    
T  31159484 gaaccctgaatcttgcatatattatgtattgtctttatcaactgagttaagctca 31159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 37054270 - 37054336
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| |||||||| |||||| |||||||||| ||| |||| ||| ||| |||| ||||||    
T  37054270 agtttgaaccccgaaccttatatatattatgcattgtccctaccaactgagctaaactcatgaggac 37054336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 462
Target Start/End: Complemental strand, 43108624 - 43108570
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    |||||||||||||| ||||||| ||||||||||  || |||| ||||||||||||    
T  43108624 gaaccctgaaccttgcatatattatgcattgtccttaccaactgagttaagctca 43108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 8545004 - 8545053
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||| ||||||| ||||||||||  ||||||| ||||||||||||||||    
T  8545004 accttgcatatattatgcattgtccttatcaactgagttaagctcacgag 8545053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 11637578 - 11637639
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||| ||||| | ||||||||||  || |||| |||||||||||||||||||    
T  11637578 gaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacgaggac 11637639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 18430994 - 18431067
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||||||| || |  |||||||||| || |||||||  ||| ||| ||||||||||||| |||||    
T  18430994 tggccgaagtttgaaccttggattttacatatattatacattgtccatattaactgagttaagctcacaaggac 18431067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 18789095 - 18789030
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| ||||||| ||||| | |||||||||||||| |||| ||| |||  ||||||||||    
T  18789095 gtttgaaccccgaaccttgcatattttatgcattgtctctaccaactgagctaatatcacgaggac 18789030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 25979911 - 25979842
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||| |||||||||| | ||||| |||| || |||||||||||  |||||  |||||||||||||||    
T  25979911 tggccgaggtttgaaccccggaccttgcatacattatgcattgtcttaatcaattgagttaagctcacga 25979842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 27219347 - 27219282
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| | ||||||||||| ||| |||||||||   ||| ||| |||||||||||||||    
T  27219347 gtttgaaccctggatcttacatatattatgtattgtctctgctaactgagctaagctcacgaggac 27219282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 34436910 - 34436845
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| |  |||| ||||||| |||||||||| ||| |||| ||| |||||||||||||||    
T  34436910 gtttgaaccccggcccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 34436845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 35270683 - 35270748
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| ||||| ||||| | |||||||||| | | |||| ||| |||||||||||||||    
T  35270683 gtttgaaccctggaccttgcatattttatgcattgtcccaaccaactgagctaagctcacgaggac 35270748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 38283058 - 38283130
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||||||||  | ||||||| |||| |||||| |||| ||||||  ||| |||||||||||||||    
T  38283058 tggccgaagtttgaaccccta-ccttacagatattatgcatagtctttatcaatagagctaagctcacgaggac 38283130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 39963553 - 39963516
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  39963553 agtttgaaccccgaaccttacatatattatgcattgtc 39963516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 40715951 - 40716016
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| | ||||| ||||||| ||||||||||  ||||||  ||| |||||||||||||||    
T  40715951 gtttgaaccccggaccttgcatatattatgcattgtccatatcaattgagctaagctcacgaggac 40716016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 4432162 - 4432110
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||||||||||  ||||||| ||||||| || ||||||||    
T  4432162 accttacatatattatgcattgtccttatcaactgagttaaacttacgaggac 4432110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 5001601 - 5001549
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||| ||||||  |||||||||||||||||||| ||||||    
T  5001601 accttgcatatattatgtattgtccttatcaaccgagttaagctcaagaggac 5001549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 5485226 - 5485178
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgaggacct 471  Q
    ||||||| |||||||||| ||| |||| ||| |||||||||||||||||    
T  5485226 catatattatgcattgtccctaccaactgagctaagctcacgaggacct 5485178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 8642361 - 8642413
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||||| ||||||| ||| ||| ||||||| ||||||||||||    
T  8642361 accttatatatatcatacattgtccctaccaatcgagttaggctcacgaggac 8642413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 463
Target Start/End: Original strand, 9123862 - 9123906
Alignment:
Q  419 cttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    ||||||||||| ||||||||||| || |||| |||||||||||||    
T  9123862 cttacatatattatgcattgtctttaccaactgagttaagctcac 9123906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 19248537 - 19248473
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||  ||| || ||||||| ||||||||||| || |||| ||| |||||||||||||||    
T  19248537 tttgaaccccaaacattgcatatattatgcattgtctataccaactgagctaagctcacgaggac 19248473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 447
Target Start/End: Complemental strand, 28498634 - 28498602
Alignment:
Q  415 gaaccttacatatatcatgcattgtctctatca 447  Q
    ||||||||||||||||||||||||| |||||||    
T  28498634 gaaccttacatatatcatgcattgtttctatca 28498602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 30893979 - 30893927
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||||||||||| ||  ||| |||||||||||||||||||    
T  30893979 accttgcatatattatgcattgtctttacaaactgagttaagctcacgaggac 30893927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 31114716 - 31114657
Alignment:
Q  408 gaaccctgaaccttacatatat--catgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||||||||||||||||||   || |||||||| ||||||| ||| |||||||||||    
T  31114716 gaaccctgaaccttacatatattatatacattgtctttatcaactgagctaagctcacga 31114657  T

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Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 465
Target Start/End: Complemental strand, 33654794 - 33654746
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||| ||||||| |||||||||| ||| |||| |||||||||||||||    
T  33654794 accttgcatatattatgcattgtccctaccaactgagttaagctcacga 33654746  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 40446029 - 40445977
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||||||||||  ||||||| ||||||| |||||||||||    
T  40446029 accttgcatatattatgcattgtccttatcaactgagttaaactcacgaggac 40445977  T

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Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 134 - 269
Target Start/End: Complemental strand, 32273454 - 32273319
Alignment:
Q  134 attaggggaatggtgggatgcaaaccctattgatgttgtgagacaagccacacaaacaggagcagctccaaatatatctgatgcatacactattaatggt 233  Q
    |||||||||||||||||||| ||| || || ||||||||||| || ||   |  ||| |||||||| |||||||||||||||||||||||||| ||||||    
T  32273454 attaggggaatggtgggatggaaatcccatagatgttgtgaggcaggctcaaagaactggagcagcaccaaatatatctgatgcatacactatcaatggt 32273355  T
Q  234 caacctggtgatctttacaagtgctctagcaaaggt 269  Q
    ||||||||||| |||||||||||||||| |||||||    
T  32273354 caacctggtgacctttacaagtgctctaccaaaggt 32273319  T

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Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 7464493 - 7464559
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||||||||| | ||||||||||||| |||||||||| ||| |||| ||||||||||||||||||||    
T  7464493 gtttgaaccccggaccttacatatattatgcattgtccctaccaactgagttaagctcacgaggacc 7464559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 46903973 - 46903902
Alignment:
Q  398 gccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||  || |||| ||||||| |||||||||||    
T  46903973 gccggagtttgaaccctggaccttacatatattatgcattgtccataccaactgagttaatctcacgaggac 46903902  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 2078301 - 2078237
Alignment:
Q  402 aagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||||||||  |||||| ||||||| |||||||||||||| |||| |||||||| |||||||    
T  2078301 aagtttgaaccccaaaccttgcatatattatgcattgtctctaccaactgagttaagttcacgag 2078237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 7651245 - 7651185
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||||||| |||||||| |||||  |||||||||| |||||||| ||||||||||||||    
T  7651245 gtttgaaccccgaaccttatatatactatgcattgtccctatcaactgagttaagctcacg 7651185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 11508504 - 11508549
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||    
T  11508504 catatatcatgcattgtccatatcaaccgagctaagctcacgagga 11508549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 16792976 - 16793041
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| ||||| ||||||| ||||||||||| || |||| | | |||||||||||||||    
T  16792976 gtttgaaccctggaccttgcatatattatgcattgtctataccaactgtgctaagctcacgaggac 16793041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 18870719 - 18870792
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||||||| | || ||||| ||||||| |||||||||| ||| |||| ||| |||||||||||||||    
T  18870719 tggccgaggtttgaatcatggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 18870792  T

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Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 28918900 - 28918957
Alignment:
Q  412 cctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||||||||| |||||||||  ||| |||||||| |||||||||||||||    
T  28918900 cctggaccttacatatattatgcattgtacctaccaaccgagctaagctcacgaggac 28918957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 43777047 - 43777119
Alignment:
Q  392 gtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||||||| |||||||||| ||||||| ||||||| |||||| ||| ||| |||| ||| |||||||||||    
T  43777047 gtgatggccgaggtttgaaccc-gaaccttgcatatattatgcatggtccctaccaactgagctaagctcacga 43777119  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 7827554 - 7827502
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||||||||||  ||||||| ||||||| |||||||||||    
T  7827554 accttacatatattatgcattgtccatatcaactgagttaaactcacgaggac 7827502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 7829942 - 7829890
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||||||||||  ||||||| ||||||| |||||||||||    
T  7829942 accttacatatattatgcattgtccatatcaactgagttaaactcacgaggac 7829890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 16980357 - 16980421
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| |||||||| ||||||| ||||||||||  || |||| ||| |||||||||||||||    
T  16980357 tttgaaccatgaaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggac 16980421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 469
Target Start/End: Complemental strand, 7738726 - 7738663
Alignment:
Q  406 ttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| | ||||| ||||| | |||||||||| ||| |||| |||||||||||||||||||    
T  7738726 ttgaaccccggaccttgcatattttatgcattgtccctaccaactgagttaagctcacgaggac 7738663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 31138457 - 31138410
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||||| ||||||||||||||||||| ||| |||||| |||||||||    
T  31138457 catatattatgcattgtctctatcaactgagataagcttacgaggacc 31138410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 48209213 - 48209272
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    ||||||||||||||||||| |||||| ||| |||||| |||||||| ||| ||| |||||    
T  48209213 gtttgaaccctgaaccttatatatattatgtattgtccctatcaactgagctaaactcac 48209272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 376686 - 376640
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||||||| |||||| ||||||||||||||| ||||||||    
T  376686 catatattatgcattatctctaccaaccgagttaagcttacgaggac 376640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 32753888 - 32753822
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| |  ||||  |||||| |||||||||| |||||||| |||| ||||||||||||||    
T  32753888 agtttgaaccccgggccttgtatatattatgcattgtccctatcaactgagtcaagctcacgaggac 32753822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 469
Target Start/End: Complemental strand, 33223916 - 33223862
Alignment:
Q  415 gaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||||||| ||||||||| |||| |||| ||| |||||||||||||||    
T  33223916 gaaccttgcatatattatgcattgtttctaccaactgagctaagctcacgaggac 33223862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 469
Target Start/End: Original strand, 33633335 - 33633385
Alignment:
Q  419 cttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| ||||||||||| ||  ||| |||||||||||||||||||    
T  33633335 cttacatatattatgcattgtctatactaactgagttaagctcacgaggac 33633385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 469
Target Start/End: Original strand, 38130948 - 38131026
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||  |||||||||| | ||||| ||||||| ||||||||||  || |||| ||||||||||||| |||||    
T  38130948 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagctcacaaggac 38131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 38388012 - 38387966
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| |||||||||| |||||||| ||| |||||||||||||||    
T  38388012 catatattatgcattgtcactatcaactgagctaagctcacgaggac 38387966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 41168139 - 41168205
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| || | |||  |||||| |||||||||  ||||||||||||||||||| ||||||||    
T  41168139 agtttgaaccttggagcttgtatatattatgcattgttcctatcaaccgagttaagcttacgaggac 41168205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 42372580 - 42372514
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| | |||||  |||||||||||||| ||   | ||||||||||||||||||||||||    
T  42372580 agtttgaaccccggaccttggatatatcatgcattatccaaaccaaccgagttaagctcacgaggac 42372514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 2563988 - 2563923
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||  ||||||||||||||| || |||| | | ||||||| |||||||||||||| ||||    
T  2563988 gtttgaacctcgaaccttacatatattattcattatttttatcaactgagttaagctcacggggac 2563923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 8075831 - 8075778
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||| ||||||| ||||||||||||||| ||| ||| |||||| |||||||||    
T  8075831 accttgcatatattatgcattgtctctattaactgaggtaagcttacgaggacc 8075778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 8127522 - 8127457
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||  |||||| ||||| | ||||||||||  || |||| |||||||||||||||||||    
T  8127522 gtttgaaccccaaaccttgcatattttatgcattgtccttaccaactgagttaagctcacgaggac 8127457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 21331423 - 21331484
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||| ||||||| ||||||||||  || |||| ||| |||||||||||||||    
T  21331423 gaaccccgaaccttgcatatattatgcattgtccataacaactgagctaagctcacgaggac 21331484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Complemental strand, 22462355 - 22462306
Alignment:
Q  420 ttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| ||||||||||  ||||||| |||||||||||||| ||||    
T  22462355 ttacatatattatgcattgtccttatcaactgagttaagctcacggggac 22462306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 29791823 - 29791774
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||||||| ||| ||||| ||||||||| ||||||| |||||||    
T  29791823 aaccttacatatattatgtattgtttctatcaactgagttaaactcacga 29791774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 48376882 - 48376829
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||||| ||||||| ||| || |||| ||| |||||||||||||||    
T  48376882 aaccttacatatattatgcattatctttaccaactgagctaagctcacgaggac 48376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 49097344 - 49097267
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||| ||||||| ||| |||| | ||||||| ||||| | |||||||| ||||| |||| ||| ||||||||||||||    
T  49097344 ggtggtggccgatgttcgaactccgaaccttgcatattttatgcattggctctaccaactgagataagctcacgagga 49097267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 51882202 - 51882267
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| | ||| ||||||| ||||||||||  || |||| |||||||||||||| ||||    
T  51882202 gtttgaaccctggatcttgcatatattatgcattgtccataccaactgagttaagctcacggggac 51882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 53633623 - 53633684
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| | ||||||||||||| ||||||| ||  || |||| |||||||||||||||||||    
T  53633623 gaaccccggaccttacatatattatgcattatccttaccaactgagttaagctcacgaggac 53633684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 7824853 - 7824801
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||| ||||||| ||||||| ||||||| |||||||||||    
T  7824853 accttgcatatattatgtattgtctatatcaactgagttaaactcacgaggac 7824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 10922310 - 10922370
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||||||| | | ||| ||||||| |||||||||| ||| |||| ||||||||||||||    
T  10922310 gtttgaaccccggatcttgcatatattatgcattgtccctaccaactgagttaagctcacg 10922370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 17755179 - 17755123
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctc 461  Q
    ||||||||| ||||||||||||||| ||| |||||  |||||||| ||| |||||||    
T  17755179 tttgaaccccgaaccttacatatattatgtattgttcctatcaactgagctaagctc 17755123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 19056499 - 19056443
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctc 461  Q
    ||||||||| ||||||||||||||| ||| |||||  |||||||| ||| |||||||    
T  19056499 tttgaaccccgaaccttacatatattatgtattgttcctatcaactgagctaagctc 19056443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 468
Target Start/End: Original strand, 20370287 - 20370347
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    ||||||| |||||| ||||| | ||||||||||  ||||||| ||| ||||||||||||||    
T  20370287 gaaccctaaaccttgcatattttatgcattgtccatatcaactgagctaagctcacgagga 20370347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 24521706 - 24521650
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctc 461  Q
    ||||||| | ||||||||||||| | |||||||||||| |||||| |||||| ||||    
T  24521706 tttgaactccgaaccttacatattttatgcattgtctcaatcaactgagttacgctc 24521650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 469
Target Start/End: Original strand, 49975804 - 49975872
Alignment:
Q  401 gaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||||   ||||| ||||||| ||||||||||  || |||| ||||||||||| |||||||    
T  49975804 gaagtttgaaccccagaccttgcatatattatgcattgtccataacaactgagttaagctcgcgaggac 49975872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 8e-22; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 30678807 - 30678880
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||    
T  30678807 tggccgaagtttgaaccatgaaccttacatatattatgcattgtccctaccaactgagttaagctcacgaggac 30678880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 391 - 469
Target Start/End: Complemental strand, 7925435 - 7925358
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||| |||||||||| ||||||| ||||||| |||||||||||||| |||| ||| |||||||||||||||    
T  7925435 ggtggtggccgaggtttgaaccccgaacctt-catatattatgcattgtctctaccaactgagctaagctcacgaggac 7925358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 469
Target Start/End: Complemental strand, 26755687 - 26755610
Alignment:
Q  392 gtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| |||||||||| | ||||| ||||||| ||||||||||  ||||||| ||| |||||||||||||||    
T  26755687 gtgatggccgaggtttgaaccccggaccttgcatatataatgcattgtccatatcaactgagctaagctcacgaggac 26755610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 13401656 - 13401597
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||| ||  |||||||||    
T  13401656 gtttgaaccccgaaccttacatatattatgcattgtctctatcaactgaactaagctcac 13401597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 1091239 - 1091173
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| ||||||| |||| || ||||||||||| || |||| |||||||||||||||||||    
T  1091239 agtttgaaccccgaaccttgcatacattatgcattgtctataccaactgagttaagctcacgaggac 1091173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 16033444 - 16033517
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| |||||||||||   ||||| ||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  16033444 tggccggagtttgaaccccagaccttgcatatattatgcattgtccctatcaactgagtcaagctcacgaggac 16033517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 17669712 - 17669639
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||||||| ||||||| ||||||| || ||||||| |||||||| |||| |||||||| |||||    
T  17669712 tggccggagtttgaaccccgaaccttgcatatattatacattgtccctatcaactgagtcaagctcacaaggac 17669639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 36371055 - 36371108
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  36371055 accttacatatattatgcattgtctctaccaactgagctaagctcacgaggacc 36371108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 6219877 - 6219929
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||| |||||| ||| ||||||||||||||||||||||||    
T  6219877 accttacatatattatgtattgtccctaccaaccgagttaagctcacgaggac 6219929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 469
Target Start/End: Complemental strand, 15729471 - 15729424
Alignment:
Q  422 acatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||    
T  15729471 acatatattatgcattgtctctaccaactgagttaagctcacgaggac 15729424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 464
Target Start/End: Complemental strand, 10292981 - 10292935
Alignment:
Q  418 ccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||    
T  10292981 ccttacatatattatgcattgtccctatcaactgagttaagctcacg 10292935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 465
Target Start/End: Original strand, 39252258 - 39252320
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||||||||| ||||||||||||| ||| ||||||  ||||||| ||| |||||||||||    
T  39252258 agtttgaaccctggaccttacatatattatgtattgtcgatatcaactgagctaagctcacga 39252320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 27449447 - 27449512
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||||| ||| ||||||| ||||||||||  ||| ||| ||| |||||||||||||||    
T  27449447 gtttgaaccctgaatcttgcatatattatgcattgtccatattaactgagctaagctcacgaggac 27449512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 27533302 - 27533237
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| ||||||| ||||||| |||||||||| ||| |||| ||  |||||||||||||||    
T  27533302 gtttgaaccccgaaccttgcatatattatgcattgtccctaccaactgatctaagctcacgaggac 27533237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 33153882 - 33153947
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||  | ||||||||||||| |||||||||| ||| |||| ||||||||||||| |||||    
T  33153882 gtttgaacctcggaccttacatatattatgcattgtccctaccaactgagttaagctcacaaggac 33153947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 1579459 - 1579407
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||    
T  1579459 accttacatatattatatattgtctctatcaaccgagttaaactcatgaggac 1579407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 3693811 - 3693863
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| |||| |||||| ||||||| ||| |||||||||||||||    
T  3693811 accttacatatattatgctttgtctatatcaactgagctaagctcacgaggac 3693863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 464
Target Start/End: Original strand, 11241999 - 11242047
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||||||||||| ||||||||||||| ||||| ||||||| ||||||    
T  11241999 aaccttacatatattatgcattgtctctgtcaactgagttaaactcacg 11242047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 36672729 - 36672781
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||||    
T  36672729 accttacatatattatggattgtctctatcaactgagttaaactcatgaggac 36672781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 449
Target Start/End: Complemental strand, 51241544 - 51241504
Alignment:
Q  409 aaccctgaaccttacatatatcatgcattgtctctatcaac 449  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  51241544 aaccctgaaccttgcatatattatgcattgtctctatcaac 51241504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 466
Target Start/End: Original strand, 50849086 - 50849137
Alignment:
Q  415 gaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||||||||||| ||||||||||  || |||| ||||||||||||||||    
T  50849086 gaaccttacatatattatgcattgtcattaccaactgagttaagctcacgag 50849137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 3573338 - 3573388
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||||||||||| |||||||||  ||| |||| ||||||||||||||||    
T  3573338 aaccttacatatattatgcattgttcctaccaactgagttaagctcacgag 3573388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 463
Target Start/End: Complemental strand, 10059579 - 10059533
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    ||||| |||| |||||||||||| ||||||||| |||||||||||||    
T  10059579 accttgcatacatcatgcattgtttctatcaactgagttaagctcac 10059533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 15670644 - 15670698
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaag 458  Q
    ||||||||||  |||||||||||||| ||| ||| || |||||||||||||||||    
T  15670644 gtttgaaccccaaaccttacatatattatgtattatcactatcaaccgagttaag 15670698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 431 - 469
Target Start/End: Complemental strand, 18091235 - 18091197
Alignment:
Q  431 atgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  18091235 atgcattgtccctatcaactgagttaagctcacgaggac 18091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 471
Target Start/End: Original strand, 21400038 - 21400092
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacct 471  Q
    ||||| ||||||| |||||||||| ||| |||| ||| |||||||||||||||||    
T  21400038 accttgcatatattatgcattgtccctaccaactgagctaagctcacgaggacct 21400092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 44243932 - 44243866
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||||||| ||| ||||||||||||| |||||||||  ||| |||| ||| ||| ||||||||||||    
T  44243932 gtttgaactctggaccttacatatattatgcattgttcctaccaactgagctaaactcacgaggacc 44243866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 49222876 - 49222810
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| | ||||| |||||||  ||||||||  |||||||  |||||||||||||||||||    
T  49222876 agtttgaaccccggaccttgcatatattgtgcattgttcctatcaattgagttaagctcacgaggac 49222810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 11702025 - 11701960
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| |||||| ||||||||||| | |||||||||| | | |||| || ||||||||||||||||    
T  11702025 gtttgcaccctggaccttacatattttatgcattgtcccaaccaactgaattaagctcacgaggac 11701960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 16924537 - 16924472
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||  || ||||||||||| ||| |||||||| | | || |||||||||||||||||||    
T  16924537 gtttgaaccccaaatcttacatatattatgtattgtctccaccgactgagttaagctcacgaggac 16924472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 16967188 - 16967257
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||| ||||||||||  ||||||| ||||||| ||||||||||  |||||||  || |||||||||||    
T  16967188 tggccggagtttgaacctcgaaccttgcatatattatgcattgtccatatcaactaagctaagctcacga 16967257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 17139519 - 17139584
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| | |||||  |||||| |||||||||| ||| |||| ||| |||||||||||||||    
T  17139519 gtttgaaccccggaccttgaatatattatgcattgtccctaccaactgagctaagctcacgaggac 17139584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 23045254 - 23045189
Alignment:
Q  400 cgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||||| | | ||||||||||||| |||||||||   ||| ||| |||||||||||||||    
T  23045254 cgaagtttgaactccggaccttacatatattatgcattgttcatattaacggagttaagctcacga 23045189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Complemental strand, 29506882 - 29506821
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| ||||| ||||||| ||| ||||||| || ||||  ||||||||||||||||||    
T  29506882 gaaccctggaccttgcatatattatgtattgtctataccaactaagttaagctcacgaggac 29506821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 40162870 - 40162798
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||||||||||| ||| |||||| || |||||| ||| ||| ||| |||| ||| |||||||||||    
T  40162870 tggccgaagtttgaaccctggaccctacatacattatgcatggtccctaacaa-cgagctaaactcacgaggac 40162798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 41573287 - 41573336
Alignment:
Q  420 ttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| |||||||||| ||| |||| ||||||| |||||||||||    
T  41573287 ttacatatattatgcattgtccctaccaactgagttaaactcacgaggac 41573336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 449
Target Start/End: Complemental strand, 42372837 - 42372788
Alignment:
Q  400 cgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaac 449  Q
    |||||||||||||   |||||||||||||| |||||||| ||||||||||    
T  42372837 cgaagtttgaacctataaccttacatatattatgcattgactctatcaac 42372788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 422614 - 422542
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||||||||| ||| | ||||||||||||||| ||||||| |  ||| || | ||||||| ||||||||||    
T  422614 tggccgaagtttaaactccgaaccttacatatattatgcattattcctaccagcagagttaaactcacgagga 422542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 468
Target Start/End: Complemental strand, 2613777 - 2613717
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||| ||||||||||||| | ||||||||||  || |||| ||| ||||||||||||||    
T  2613777 gaaccccgaaccttacatattttatgcattgtccataccaactgagctaagctcacgagga 2613717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 2889941 - 2889989
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||| ||||||| |||||||||| ||| |||| |||||||||||||||    
T  2889941 accttgcatatattatgcattgtccctaccaactgagttaagctcacga 2889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 3248840 - 3248800
Alignment:
Q  400 cgaagtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    |||| |||||||||| |||||||||||||| ||||||||||    
T  3248840 cgaaatttgaaccctaaaccttacatatattatgcattgtc 3248800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 3528484 - 3528536
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| || |||||| ||||||||| ||| ||| |||||||||||    
T  3528484 accttacatatattatacattgtttctatcaactgagctaaactcacgaggac 3528536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 4770643 - 4770695
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||||||||||||   ||||||| ||||||||||||| |||||    
T  4770643 accttatatatatcatgcattgttcatatcaactgagttaagctcacaaggac 4770695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 10480760 - 10480708
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||||||||||  || || | |||||||||||||||||||    
T  10480760 accttacatatattatgcattgtccttaccatctgagttaagctcacgaggac 10480708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 465
Target Start/End: Complemental strand, 24978302 - 24978242
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||| |||||| ||||||| ||| ||| ||| || |||| |||||||||||||||    
T  24978302 tttgaaccctaaaccttgcatatattatgtattatctataccaactgagttaagctcacga 24978242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 41142701 - 41142753
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||||||||||||||||||| |||| ||| | ||||||||    
T  41142701 accttgcatatattatgcattgtctctatcaactgagtcaagtttacgaggac 41142753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 468
Target Start/End: Complemental strand, 44221018 - 44220982
Alignment:
Q  432 tgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    ||||||||||||||||||  |||||||||||||||||    
T  44221018 tgcattgtctctatcaactaagttaagctcacgagga 44220982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 48131243 - 48131295
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||||||| |||||  |||| ||||||| |||||||||||    
T  48131243 accttacatatattatgcattatctctgccaactgagttaaactcacgaggac 48131295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 52441526 - 52441578
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||||||||||| || |||| ||| |||||||||||||||    
T  52441526 accttgcatatattatgcattgtctataccaactgagctaagctcacgaggac 52441578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 38904120 - 38904056
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||| |||| ||||||||||||||    
T  38904120 gtttgaaccctgaaccttgcatatattatgcattgtatctatcaatcgagctaagctcacgagga 38904056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 469
Target Start/End: Complemental strand, 30243332 - 30243244
Alignment:
Q  381 tcaaatattcggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| || |||| ||||||| |||||||||| |||||||  |||||| |||||||||||||| |||| ||| |||| ||||||||||    
T  30243332 tcaaatttttggtggtggccgaggtttgaaccccgaaccttgtatatattatgcattgtctctaccaactgagctaagttcacgaggac 30243244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 467
Target Start/End: Original strand, 27412851 - 27412901
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgagg 467  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  27412851 accttacatatattatgcattgtctctaccaactgagttaagctcacgagg 27412901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 474
Target Start/End: Complemental strand, 27244715 - 27244646
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacctgaa 474  Q
    ||||||||||  ||||| ||||||| |||||||||| |||||||| ||| ||||||||||||||| ||||    
T  27244715 tttgaaccctagaccttgcatatattatgcattgtccctatcaactgagctaagctcacgaggacatgaa 27244646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 44694747 - 44694682
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| || |||| ||||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  44694747 gtttgaaccccgagccttgcatatattatgcattgtctatatcaactgagttaagttcacgaggac 44694682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 440
Target Start/End: Original strand, 9391755 - 9391802
Alignment:
Q  393 tgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||    
T  9391755 tgatggctgaagtttgaaccccaaaccttacatatatcatgcattgtc 9391802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 5168581 - 5168639
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    |||||||||| ||||||| ||||||| ||||||| || |||||||| ||||||||||||    
T  5168581 gtttgaaccccgaaccttgcatatattatgcattatccctatcaactgagttaagctca 5168639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 20990906 - 20990968
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||||||||||||||| ||||| | ||||||||||| || ||||  |||||||||||||||    
T  20990906 gtttgaaccctgaaccttgcatattttatgcattgtctataacaactaagttaagctcacgag 20990968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 31815889 - 31815951
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||||||| | ||||| ||||||| |||||||||| ||| |||| ||||||||||||||||    
T  31815889 gtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagttaagctcacgag 31815951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 469
Target Start/End: Original strand, 35820290 - 35820368
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||| |||||||||| | ||||| ||| ||| |||||||||| ||| |||| ||| |||||||||||||||    
T  35820290 ggtggtggccgaggtttgaaccccggaccttgcatgtattatgcattgtccctaccaactgagctaagctcacgaggac 35820368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 1861803 - 1861876
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||||||||| || ||||| ||||||| ||||||||||  ||||| | ||| |||||||||||||||    
T  1861803 tggccgatgtttgaaccatggaccttgcatatattatgcattgtccatatcagctgagctaagctcacgaggac 1861876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 11560557 - 11560492
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||||||||| ||||||| |||||||||| ||| |||  ||| |||||||| ||||||    
T  11560557 gtttgaaccctgaaccttgcatatattatgcattgtccctaccaattgagctaagctcatgaggac 11560492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 29896296 - 29896361
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||  |||||| ||||||| ||||||||| ||||||||| || |||| |||||||||||    
T  29896296 gtttgaaccccaaaccttgcatatattatgcattgtttctatcaactgaattaaactcacgaggac 29896361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 40967361 - 40967434
Alignment:
Q  392 gtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||| ||| |||||||||   |||||| ||||||| ||||||||||  ||||||| |||||||||||||||    
T  40967361 gtgatggtcgaggtttgaacctcaaaccttgcatatattatgcattgtccttatcaactgagttaagctcacga 40967434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 7206171 - 7206119
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| |||||||||||||| |||| ||| |||||||||||||||    
T  7206171 accttgcatatattatgcattgtctctaccaactgagctaagctcacgaggac 7206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 439
Target Start/End: Complemental strand, 9384795 - 9384759
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgt 439  Q
    ||||||||||||||||||||||||||| |||||||||    
T  9384795 agtttgaaccctgaaccttacatatattatgcattgt 9384759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 28202343 - 28202291
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| |||||||||| |||||||| ||| |||||||||| ||||    
T  28202343 accttacatatattatgcattgtccctatcaactgagctaagctcacgtggac 28202291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 44026666 - 44026602
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||| ||||||||||||||| |||| |||||  || |||  |||||||||||||||||||    
T  44026666 tttgaaccccgaaccttacatatattatgcgttgtccataccaattgagttaagctcacgaggac 44026602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 474
Target Start/End: Complemental strand, 5028924 - 5028845
Alignment:
Q  395 atggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacctgaa 474  Q
    |||||||  ||||||||||  |||||||||||||| ||||||||||   |||||| ||| ||||||||| ||||| ||||    
T  5028924 atggccggggtttgaaccccaaaccttacatatattatgcattgtcctaatcaactgagctaagctcaccaggacatgaa 5028845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 470
Target Start/End: Complemental strand, 24033769 - 24033730
Alignment:
Q  431 atgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  24033769 atgcattgtctctaccaaccgagctaagctcacgaggacc 24033730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 449
Target Start/End: Original strand, 35458775 - 35458834
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgca-ttgtctctatcaac 449  Q
    ||||||||||||| |||||||||  |||||||||||||| ||||| ||||||||| ||||    
T  35458775 ggtgatggccgaaatttgaaccccaaaccttacatatattatgcatttgtctctaccaac 35458834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 8044043 - 8043973
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||| |||||||| ||||| ||||| ||||| ||  ||||||||||||||| ||| |||| |||||||    
T  8044043 tggccgaggtttgaactctgaatcttacgtatattatatattgtctctatcaactgagctaagttcacgag 8043973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 469
Target Start/End: Original strand, 10735820 - 10735898
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||  |||||||||| | ||||| ||||||| |||||| ||| ||| |||| ||| |||||||||||||||    
T  10735820 ggtggtggccggggtttgaaccccggaccttgcatatattatgcatcgtccctaccaactgagctaagctcacgaggac 10735898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 20565077 - 20565139
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||||||| | ||||| ||||||| |||||||||| ||| |||| ||| ||||||||||||    
T  20565077 gtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgag 20565139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 469
Target Start/End: Complemental strand, 28644581 - 28644519
Alignment:
Q  408 gaaccctgaacctt-acatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||| |||||||| |||||||||| ||| |||| ||||||||||||| |||||    
T  28644581 gaaccccgaaccttgacatatattatgcattgtccctaccaactgagttaagctcacaaggac 28644519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 469
Target Start/End: Complemental strand, 33064058 - 33063980
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| |||||| |||| |||| | | ||||| ||||||| ||||||||||  ||||||| ||| |||||||||||||||    
T  33064058 ggtggtggccggagttcgaactccggaccttgcatatattatgcattgtccatatcaactgagctaagctcacgaggac 33063980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 36359373 - 36359315
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    |||||||||| | ||||| ||||||| ||||||||||   |||||||||||||||||||    
T  36359373 gtttgaaccccggaccttgcatatattatgcattgtccaaatcaaccgagttaagctca 36359315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 469
Target Start/End: Original strand, 37320530 - 37320584
Alignment:
Q  415 gaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||||||| ||||||||||| || |||| |||||||||||||| ||||    
T  37320530 gaaccttgcatatattatgcattgtctttaccaactgagttaagctcacgtggac 37320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 145013 - 145066
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaa 457  Q
    |||| ||||||||||||||||||||| ||||||||||  || |||| |||||||    
T  145013 gtttaaaccctgaaccttacatatattatgcattgtccataccaactgagttaa 145066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 4927439 - 4927512
Alignment:
Q  392 gtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||||||  |||||||||| | ||||||||||||| |||| ||||| ||| |||| ||| |||| ||||||    
T  4927439 gtgatggccggggtttgaaccccggaccttacatatattatgctttgtccctaccaactgagctaagttcacga 4927512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 5676798 - 5676733
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||  | |||| ||||||| ||||||||||  || |||| |||||||||||||||||||    
T  5676798 gtttgaacccccacccttgcatatattatgcattgtcattaccaactgagttaagctcacgaggac 5676733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 6723083 - 6723144
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| ||||| ||||||| || |||||||  ||||||| ||||||| |||||||||||    
T  6723083 gaaccctggaccttgcatatattatacattgtccatatcaactgagttaaactcacgaggac 6723144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 13394997 - 13395046
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||| |||||||||||||||||| ||| |||| ||| ||||||||||||    
T  13394997 accttgcatatatcatgcattgtccctaccaactgagctaagctcacgag 13395046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 469
Target Start/End: Original strand, 14414883 - 14414962
Alignment:
Q  393 tgatggccgaagtttgaaccctgaaccttacatatatcat---gcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| || ||||||||||  ||||||||||||||| ||   ||||||||  || |||| |||||||||||||||||||    
T  14414883 tgatggtcggagtttgaacctcgaaccttacatatattattatgcattgtccataccaactgagttaagctcacgaggac 14414962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 21497734 - 21497665
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||| |||| ||||  ||||||| ||||||| |||||||||   || ||||||||||||||||||||    
T  21497734 tggccgaggtttaaacctcgaaccttgcatatattatgcattgttcttaccaaccgagttaagctcacga 21497665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Complemental strand, 24548172 - 24548111
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||  ||||||||||||| ||||||||||| || |||  ||||||| |||||||||||    
T  24548172 gaaccctataccttacatatattatgcattgtctataccaattgagttaaactcacgaggac 24548111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 34977250 - 34977197
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||| ||||||| ||||||||||  || |||| ||||||||||||||||||||    
T  34977250 accttgcatatattatgcattgtccataccaactgagttaagctcacgaggacc 34977197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 2257017 - 2256965
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||||||||||  || |||| |||||||||||||||||||    
T  2257017 accttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 2256965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 4509595 - 4509531
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| || ||||| ||||||| ||||||||||  ||||||||||| |||| | ||||||||    
T  4509595 tttgaaccttggaccttgcatatattatgcattgtccatatcaaccgagctaagttgacgaggac 4509531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 468
Target Start/End: Original strand, 9064591 - 9064655
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||||||||||||||| ||||    | |||||||| ||| |||| ||||||||||||||||||    
T  9064591 gtttgaaccctgaaccttgcataaggtacgcattgtccctaccaactgagttaagctcacgagga 9064655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 22571868 - 22571932
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||| | || || ||||||| ||||||||||| ||||||| ||| |||| ||||||||||    
T  22571868 tttgaaccccggacattgcatatattatgcattgtctatatcaactgagctaagttcacgaggac 22571932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 465
Target Start/End: Complemental strand, 22608573 - 22608525
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||| ||||||| |||||||||||||| |||| ||| |||||||||||    
T  22608573 accttgcatatattatgcattgtctctaccaactgagctaagctcacga 22608525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 466
Target Start/End: Original strand, 31166111 - 31166171
Alignment:
Q  406 ttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||| || ||||||||||||| || |||| ||||||||||| || ||||| |||||||    
T  31166111 ttgaaccttggaccttacatatattatacattatctctatcaactgaattaagttcacgag 31166171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 41542977 - 41543021
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    ||||||| |||| ||||| ||||||||||||||| ||||||||||    
T  41542977 tggccgaggtttaaaccccgaaccttacatatattatgcattgtc 41543021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 41682391 - 41682454
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| |||||||||||||| ||||||| | | || |||| ||||||||||||| |||||    
T  41682391 tttgaaccct-aaccttacatatattatgcattatttataccaactgagttaagctcacaaggac 41682454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 16390496 - 16390422
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||||| |||||||||| | ||||||||||||| |||||||||| ||| |||| ||| ||||||||||||||||    
T  16390496 tggccgaggtttgaaccccggaccttacatatattatgcattgtccctaccaactgaggtaagctcacgaggacc 16390422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 331880 - 331953
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||||||| ||  |||||| ||||||| |||||||||||||| |||| |||||||||||||||||||    
T  331880 tggccgaggtttgaatcccaaaccttgcatatattatgcattgtctctaccaactgagttaagctcacgaggac 331953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 19277641 - 19277568
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||| |||||||||||||||| ||||| |||||||||  |||||||| |||||||| ||||||||||    
T  19277641 tggccgaggttcgaaccctgaaccttacctatattatgcattgttcctatcaactgagttaagttcacgaggac 19277568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 6470623 - 6470678
Alignment:
Q  409 aaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    ||||| ||| ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  6470623 aaccccgaaacttacatatattatgcattgtctttatcaactgagttaagctcacg 6470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 14552388 - 14552333
Alignment:
Q  412 cctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagg 467  Q
    ||||||||||  |||||| ||||||| ||||||||||| |||||||||||||||||    
T  14552388 cctgaaccttgtatatattatgcattatctctatcaactgagttaagctcacgagg 14552333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 14945515 - 14945574
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    ||||||| || ||||||||||||||| ||||| ||||||||||||| ||| |||||||||    
T  14945515 gtttgaatcccgaaccttacatatattatgcactgtctctatcaactgagctaagctcac 14945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 2105965 - 2105899
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||  ||||||||||||||| ||||||||| | || |||||||| ||| |||||||||||    
T  2105965 agtttgaacctcgaaccttacatatattatgcattgtttttaccaaccgagctaaactcacgaggac 2105899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 469
Target Start/End: Original strand, 7281415 - 7281465
Alignment:
Q  419 cttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| || ||||||||||| |||||||||||| |||||||||||    
T  7281415 cttacatatattatacattgtctctaccaaccgagttaaactcacgaggac 7281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 12841883 - 12841945
Alignment:
Q  408 gaaccctgaaccttacatatatc-atgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| | |||||||||||||  |||||||||| |||||||||||| |||||||||||||||    
T  12841883 gaaccccggaccttacatatatttatgcattgtcgctatcaaccgagctaagctcacgaggac 12841945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 8840522 - 8840583
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||||| || |||||||||| ||||||||||||   |||| |||||||||||||||    
T  8840522 gtttgaaccctgtactttacatatattatgcattgtctccggcaactgagttaagctcacga 8840583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 32053855 - 32053782
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||||||  ||||||| ||||||| ||||||||||  || |||| ||| |||||||||||||||    
T  32053855 tggccggagtttgaaccacgaaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 32053782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 4826357 - 4826309
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctcta 444  Q
    |||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  4826357 tggccggagtttgaacctcgaaccttacatatattatgcattgtctcta 4826309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 12412323 - 12412271
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| |||||||||||||| ||||  ||||||||||||||||||    
T  12412323 accttgcatatattatgcattgtctctaccaactaagttaagctcacgaggac 12412271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 14585236 - 14585164
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||  || ||||||| |||| ||| |||||||||    
T  14585236 ggtggtggccgaaatttgaaccccgaaccttacatatattataaatcgtctctaccaactgagctaagctcac 14585164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 463
Target Start/End: Original strand, 23635715 - 23635775
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    ||||||||| | ||||||||||||||| ||||||||| | ||||||| ||| |||||||||    
T  23635715 agtttgaactccgaaccttacatatattatgcattgtatatatcaactgagataagctcac 23635775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 476
Target Start/End: Original strand, 24623319 - 24623391
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacctgaatt 476  Q
    |||||||||| ||||||||||||||| ||||||||||  ||||||| ||| ||| ||||| | ||| ||||||    
T  24623319 gtttgaaccccgaaccttacatatattatgcattgtccatatcaactgagctaaactcacaaagacatgaatt 24623391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 28951466 - 28951394
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    ||||||| |||| ||| ||||||||| ||||||| |||||||||   || |||| ||||||||||||||||||    
T  28951466 tggccgaggtttaaactctgaaccttgcatatattatgcattgttcataccaactgagttaagctcacgagga 28951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 2617219 - 2617266
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    |||||||||||||| |||||||||||||| ||||  ||||||||||||    
T  2617219 aaccttacatatattatgcattgtctctaccaactaagttaagctcac 2617266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 10018471 - 10018397
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||| |||||| ||||||||||| ||||||||||||||| ||||||| || ||| |||| ||| ||| ||||||||    
T  10018471 ggtggtggccggagtttgaaccccgaaccttacatatattatgcattatc-ctaccaactgagctaaactcacgag 10018397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 29283875 - 29283812
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||||||||  ||||| ||||||| || ||||||||||| |||| |||||||||| |||||    
T  29283875 agtttgaaccctagaccttgcatatattatacattgtctctaccaactgagttaagcttacgag 29283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 12204416 - 12204362
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||||||||||||| ||||||||||  ||||||| ||| || |||||||||||||    
T  12204416 aaccttacatatattatgcattgtccatatcaactgagctatgctcacgaggacc 12204362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 32524422 - 32524484
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||||||||| || || ||||||| |||||||||| ||| |||  ||||||||||||||||    
T  32524422 gtttgaaccctggactttgcatatattatgcattgtccctaccaattgagttaagctcacgag 32524484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 788925 - 788860
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| | ||||||| ||||||| ||||||||||  || |||| ||| |||||||||||||||    
T  788925 gtttgaactccgaaccttgcatatattatgcattgtccttaccaactgagataagctcacgaggac 788860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 468
Target Start/End: Original strand, 1989036 - 1989108
Alignment:
Q  395 atggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||| ||| |||||||||   |||||||||||||| ||||||||||  || |||| ||||||||||||||||||    
T  1989036 atggtcgaggtttgaacctcaaaccttacatatattatgcattgtc-ataccaactgagttaagctcacgagga 1989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 7081669 - 7081722
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||| ||||||| ||| ||||||| ||||||| ||| ||||||||||||||||    
T  7081669 accttgcatatattatgtattgtctttatcaactgagctaagctcacgaggacc 7081722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 8381200 - 8381261
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| ||||| ||||| | ||||||||||| || |||| |||||||||||||| ||||    
T  8381200 gaaccctggaccttgcatatgttatgcattgtctttaccaactgagttaagctcacggggac 8381261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 8629698 - 8629759
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||| ||||||| ||||||| ||||||||||  || |||  |||||||||||||||    
T  8629698 gtttgaaccccgaaccttgcatatattatgcattgtccataccaattgagttaagctcacga 8629759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 12459735 - 12459776
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcatt 437  Q
    |||| ||||||||||||| ||||||||||||||| |||||||    
T  12459735 tggctgaagtttgaaccccgaaccttacatatattatgcatt 12459776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 12735245 - 12735310
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||  |||||| ||||| | |||||||||| | | |||| |||||||||||||||||||    
T  12735245 gtttgaaccccaaaccttgcatattttatgcattgtcccaaccaactgagttaagctcacgaggac 12735310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 13496175 - 13496110
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| | | ||||| ||||||| |||||||||   ||||||| |||||||||||||||||||    
T  13496175 gtttgaactccggaccttgcatatattatgcattgttcatatcaactgagttaagctcacgaggac 13496110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 462
Target Start/End: Original strand, 21941474 - 21941519
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    ||||||||||||| | |||||||| |||||||| ||||||||||||    
T  21941474 accttacatatattacgcattgtccctatcaactgagttaagctca 21941519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 24212538 - 24212599
Alignment:
Q  401 gaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    |||||||||||||   || |||||||||| ||||||||||  ||||||| ||||||||||||    
T  24212538 gaagtttgaaccccatacattacatatattatgcattgtccatatcaactgagttaagctca 24212599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 24349603 - 24349538
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| ||||||| || |||| || ||||||   || ||||||||||||||||||||||||    
T  24349603 gtttgaaccccgaaccttgcaaatattatacattgtgcataccaaccgagttaagctcacgaggac 24349538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 24373712 - 24373777
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||   ||||| ||||||| |||||||||||||| |||  ||||||| |||||||||||    
T  24373712 gtttgaacccctgaccttgcatatattatgcattgtctctaccaattgagttaaactcacgaggac 24373777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 26356075 - 26356148
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||||||| ||||||| ||||||| |||||||||| | | |||| ||| | ||||||| |||||    
T  26356075 tggccggagtttgaaccccgaaccttgcatatattatgcattgtcccaaccaactgagcttagctcacaaggac 26356148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 31140822 - 31140879
Alignment:
Q  412 cctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| ||||||| || |||| ||| ||||| | |||||||||||||||||||    
T  31140822 cctgaaccttgcatatattatacattatctttatcagctgagttaagctcacgaggac 31140879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 4450317 - 4450261
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||| | ||||| ||||||| ||||||||||| ||||||| ||| ||||||||||    
T  4450317 gaaccccggaccttgcatatattatgcattgtctttatcaactgagctaagctcacg 4450261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 13036545 - 13036481
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||| |||| |||||| ||| |||||||||| | | ||||||||||||  ||||||||||    
T  13036545 tttgaaccccgaactttacatgtattatgcattgtcccaaccaaccgagttaaattcacgaggac 13036481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 18256929 - 18256877
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||||||||||  ||||||| ||| |||||||||||||||    
T  18256929 accttgcatatattatgcattgtccttatcaactgagctaagctcacgaggac 18256877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 468
Target Start/End: Original strand, 32409181 - 32409244
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||||||| ||||||||||||||| ||||||||||| || ||||  ||||||| ||| |||||    
T  32409181 gtttgaaccc-gaaccttacatatattatgcattgtctttaccaactcagttaagttcatgagga 32409244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 22267640 - 22267575
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| |||||| ||||||||||| |||||||||||||| |||| ||||||| |||||||||||    
T  22267640 gtttgaatcctgaatcttacatatattatgcattgtctctaccaactgagttaaactcacgaggac 22267575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 463
Target Start/End: Complemental strand, 23221452 - 23221392
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    ||||||||||  ||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  23221452 agtttgaaccacgaaccttacatatattatgcattgtctctaccaactgagttaagctcac 23221392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 36755074 - 36755009
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| || ||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||    
T  36755074 agtttgaatcccgaaccttacatatattatgcattgtc-ctaccaactgagttaagctcacgaggac 36755009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 36760871 - 36760806
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| || ||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||    
T  36760871 agtttgaatcccgaaccttacatatattatgcattgtc-ctaccaactgagttaagctcacgaggac 36760806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 471
Target Start/End: Complemental strand, 46552041 - 46551987
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacct 471  Q
    ||||| ||||||||||||||||||| || |||| |||||||||||||||||||||    
T  46552041 acctttcatatatcatgcattgtctataccaactgagttaagctcacgaggacct 46551987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 7388041 - 7388106
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| || ||||||||||||||| |||||||||| | | |||| |||||||||||||||||||    
T  7388041 gtttgaatcccgaaccttacatatattatgcattgtcccaaccaactgagttaagctcacgaggac 7388106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 34448612 - 34448677
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| ||||||||||||| ||||||||||   | |||| |||||||||||||||||||    
T  34448612 gtttgaaccctggaccttacatatattatgcattgtccaaaccaactgagttaagctcacgaggac 34448677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 42829228 - 42829301
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||||||| | | ||| ||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  42829228 tggccggagtttgaaccccggagcttgcatatattatgcattgtccctatcaactgagtcaagctcacgaggac 42829301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 467
Target Start/End: Complemental strand, 25246834 - 25246767
Alignment:
Q  400 cgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagg 467  Q
    |||||||||||||| ||| ||| ||||||| ||||||||||| ||||||| ||| ||| |||||||||    
T  25246834 cgaagtttgaacccagaatcttgcatatattatgcattgtctttatcaactgagctaaactcacgagg 25246767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 464
Target Start/End: Complemental strand, 34000320 - 34000261
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    ||||||||| ||||||||||||||| ||||||| ||  ||||||| ||||||||||||||    
T  34000320 tttgaaccccgaaccttacatatattatgcattatccttatcaactgagttaagctcacg 34000261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 48103675 - 48103741
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| ||||||| ||||| | |||||||||| | | |||| |||||||||||||||||||    
T  48103675 agtttgaaccccgaaccttgcatattttatgcattgtcccaaccaactgagttaagctcacgaggac 48103741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 4047844 - 4047780
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||||||||| ||||||| ||||||| || |||||||| ||| |||||||||||||||    
T  4047844 gtttaaaccctgaaccttgcatatattatgcattatc-ctatcaactgagctaagctcacgaggac 4047780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 16355560 - 16355507
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||||| || || |||||||| |||| |||||||||||||||||||    
T  16355560 aaccttacatatattatacaatgtctctaccaactgagttaagctcacgaggac 16355507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 40187651 - 40187704
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||||||||||| |||||||||| ||| |||| |||||||||||| |||||||    
T  40187651 accttacatatattatgcattgtccctaccaactgagttaagctcatgaggacc 40187704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 43539106 - 43539171
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| | ||||||||||||| |||||||||  |||||||| ||| ||||||||| |||||    
T  43539106 gtttgaaccccggaccttacatatattatgcattgttcctatcaactgagctaagctcacaaggac 43539171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 24839534 - 24839482
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| | ||||||||||| || |||| |||||||||||||||||||    
T  24839534 accttacatattttatgcattgtctataccaactgagttaagctcacgaggac 24839482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 44454561 - 44454505
Alignment:
Q  414 tgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||||||| ||||| | |||||||||| ||| |||| ||||||||||||||||||||    
T  44454561 tgaaccttgcatattttatgcattgtccctaccaactgagttaagctcacgaggacc 44454505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 3948094 - 3948051
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||    
T  3948094 catatattatgcattgtctctatcaactgagttaaactcacgag 3948051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 466
Target Start/End: Original strand, 8879760 - 8879811
Alignment:
Q  415 gaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||| ||||||| ||||||||||| || |||| ||||||||||||||||    
T  8879760 gaaccttgcatatattatgcattgtctataccaactgagttaagctcacgag 8879811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 469
Target Start/End: Original strand, 964758 - 964808
Alignment:
Q  419 cttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| |||||| ||||||||| |||||| || |||||||||||||||||||    
T  964758 cttatatatattatgcattgtttctatcgactgagttaagctcacgaggac 964808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 19793872 - 19793798
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatat-atcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||| |||||| ||| ||| ||||| |||||||||||||  ||||||| ||||||| |||||||||||    
T  19793872 tggccgaggttcgaaccccgaatcttgcatattatcatgcattgtccatatcaactgagttaaactcacgaggac 19793798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 3830127 - 3830062
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| ||||| ||||||| |||||||||| |||  ||| ||| |||| ||||||||||    
T  3830127 gtttgaaccctggaccttgcatatattatgcattgtccctacaaactgagctaagttcacgaggac 3830062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 4227530 - 4227595
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||  ||||||||| | | ||||||||||  || |||| |||||||||||||||||||    
T  4227530 gtttgaaccctataccttacatgttttatgcattgtccataccaactgagttaagctcacgaggac 4227595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 5317299 - 5317356
Alignment:
Q  413 ctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||||||| ||||||| ||||||| ||  ||||||| ||||||||||||||| ||||    
T  5317299 ctgaaccttgcatatattatgcattttccatatcaactgagttaagctcacgaagacc 5317356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 10242539 - 10242479
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||||| ||||| ||||||| ||||||| | |||| |||| |||||||||||||||    
T  10242539 gtttgaaccctggaccttgcatatattatgcatt-tatctaccaactgagttaagctcacga 10242479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 10244786 - 10244721
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| | ||||| ||||||| ||||||||||  || |||| ||| |||||||||||||||    
T  10244786 gtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 10244721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 19626527 - 19626592
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| | ||||| ||||||| ||||||||||   | |||| |||||||||||||||||||    
T  19626527 gtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgagttaagctcacgaggac 19626592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 457
Target Start/End: Original strand, 19684226 - 19684267
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaa 457  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  19684226 aaccttacatatattatgcattgtctatatcaactgagttaa 19684267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 21597739 - 21597678
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||| ||| ||||| ||||||||||| ||||||||||  ||||||| ||| |||||||||||    
T  21597739 gtttaaactctgaaacttacatatattatgcattgtccatatcaactgagataagctcacga 21597678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 29726859 - 29726794
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| ||||||| ||||||| || ||||||   | ||||| |||||||||||||||||||    
T  29726859 gtttgaaccccgaaccttgcatatattatacattgttcatgtcaactgagttaagctcacgaggac 29726794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 35222983 - 35222918
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||   ||||| |||||||||||||||||| |||||||| ||  ||| |||||||||||    
T  35222983 gtttgaaccccagaccttgcatatatcatgcattgtccctatcaactgacctaaactcacgaggac 35222918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 35666346 - 35666301
Alignment:
Q  420 ttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||| ||||||||||  || ||||||||||||||||||||    
T  35666346 ttacatatattatgcattgtccttaccaaccgagttaagctcacga 35666301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 36803877 - 36803832
Alignment:
Q  424 atatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| |||||||||||||| |||| ||| |||||||||||||||    
T  36803877 atatattatgcattgtctctaccaactgagctaagctcacgaggac 36803832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 38911346 - 38911293
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||| || |||||||| ||||||| |||||||||||||| ||||    
T  38911346 aaccttgcatatattatacattgtctttatcaactgagttaagctcacggggac 38911293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 39926540 - 39926601
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||| |||| || ||||||| ||||||||||  ||||||| ||| |||||||||||    
T  39926540 gtttgaaccccgaacattgcatatattatgcattgtccttatcaactgagctaagctcacga 39926601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 457
Target Start/End: Complemental strand, 45425508 - 45425459
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaa 457  Q
    |||||| ||||||| ||||||| ||||||||||| ||||||| |||||||    
T  45425508 gaaccccgaaccttgcatatattatgcattgtctttatcaactgagttaa 45425459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 1399208 - 1399156
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||||||||||||||  || |||| ||||||| |||||||||||    
T  1399208 accttgcatatatcatgcattgtccataccaactgagttaaactcacgaggac 1399156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 15913598 - 15913546
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||| ||||||| |||||||||||||| |||| ||||||| ||||| ||||    
T  15913598 aaccttgcatatattatgcattgtctctagcaactgagttaatctcactagga 15913546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 25251569 - 25251509
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    ||||||||||  ||||||| |||||| ||||||||| | || |||| ||||||||||||||    
T  25251569 gtttgaaccccaaaccttatatatattatgcattgtttataccaactgagttaagctcacg 25251509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 32315278 - 32315222
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||||||||||| ||||||| ||| | ||||  ||||||| ||||||||||||||    
T  32315278 gaaccctgaaccttgcatatattatgtaatgtccttatcaactgagttaagctcacg 32315222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 2932181 - 2932117
Alignment:
Q  405 tttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| |||||||| ||||||||||| |||||||||| |||||||| ||| |||||||||||||||    
T  2932181 tttgtaccctgaatcttacatatattatgcattgtccctatcaacagagctaagctcacgaggac 2932117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 41521014 - 41520948
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||||| | ||||||    
T  41521014 agtttgaaccttgaaccttgcatatattatgcattgtctctaccaactgagttaagcttatgaggac 41520948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 466
Target Start/End: Complemental strand, 54500628 - 54500566
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||||||| | ||||||||||||| |||||||||||||| |||| ||| ||||||||||||    
T  54500628 gtttgaaccccggaccttacatatattatgcattgtctctaccaactgagctaagctcacgag 54500566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 19332295 - 19332368
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||||||| ||||| || ||||||| ||||||||||  ||||| | ||| |||||||||||||||    
T  19332295 tggccgaagtttgaaccatgaactttgcatatattatgcattgtccttatcatctgagataagctcacgaggac 19332368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 39171372 - 39171437
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||||||||| ||||| | ||||||||||  ||||||| ||| |||||||||||||||    
T  39171372 gtttgaaccctgaaccttgcatattttatgcattgtccatatcaactgagctaagctcacgaggac 39171437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 50362141 - 50362206
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| ||||| ||||||| |||||||||| ||| |||| ||| |||||||||||||||    
T  50362141 gtttgaaccctggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 50362206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 20799396 - 20799462
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||||||||| | ||||| ||||||| |||||||||| ||| |||| ||| ||||||||||||||||    
T  20799396 gtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggacc 20799462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 458
Target Start/End: Original strand, 50650933 - 50650983
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaag 458  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||| ||||    
T  50650933 gaaccctgaaccttacatatattatgcattgtccttatcaaccgagctaag 50650983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 6459939 - 6459988
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  6459939 accttacatatattatgcattgtccatatcaactgagttaagctcacgag 6459988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 7230347 - 7230274
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| |||||||||| | ||||| ||||||| ||||||||||  || |||| ||| |||||||||||||||    
T  7230347 tggccgaggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggac 7230274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 468
Target Start/End: Complemental strand, 14136158 - 14136086
Alignment:
Q  398 gccgaagtttgaaccctgaaccttacatatatc--atgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    ||||| ||||||| || |||||||||||||||   ||||||||||| ||||||| ||| ||||||||||||||    
T  14136158 gccgaggtttgaatccagaaccttacatatatattatgcattgtctttatcaactgagctaagctcacgagga 14136086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 14202481 - 14202546
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| | ||||||||||||| ||||||| ||   |||||| |||||||||||||||||||    
T  14202481 gtttgaaccccggaccttacatatattatgcattatccaaatcaactgagttaagctcacgaggac 14202546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 21318255 - 21318320
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||  ||||| ||||||| |||||||||| ||| |||| ||||||||||| |||||||    
T  21318255 gtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagttaagctcgcgaggac 21318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 21449900 - 21449965
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| ||||| |||||||||||||||||  || || || ||| |||||||||||||||    
T  21449900 gtttgaaccctggaccttgcatatatcatgcattgttcctgtcgactgagctaagctcacgaggac 21449965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 23810008 - 23809943
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||||||||| ||||||| |||| |||||  || |||| ||| |||||||||||||||    
T  23810008 gtttgaaccctgaaccttgcatatattatgctttgtccataccaactgagctaagctcacgaggac 23809943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 43722824 - 43722759
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| | ||||||||||||| ||||||||||  || |||| ||||||| |||||||||||    
T  43722824 gtttgaaccccggaccttacatatattatgcattgtccataccaactgagttaaactcacgaggac 43722759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 56096264 - 56096207
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagct 460  Q
    ||||||||||  ||||||||||||||| ||||||||||  ||||||| ||||||||||    
T  56096264 agtttgaaccacgaaccttacatatattatgcattgtccttatcaactgagttaagct 56096207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 32006567 - 32006495
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||| ||||||||||| |||| |||||||||| ||||||| || ||| |||| ||| ||| ||||||||||    
T  32006567 tggccggagtttgaaccccgaactttacatatattatgcattatccctaccaactgagctaaactcacgagga 32006495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 468
Target Start/End: Original strand, 39842026 - 39842078
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||||||||||| ||||||||||  ||||||| |||||||| |||||||||    
T  39842026 aaccttacatatattatgcattgtccttatcaactgagttaagatcacgagga 39842078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 463
Target Start/End: Complemental strand, 52936701 - 52936641
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    ||||||||||   |||||||||||||| || |||||| ||||||||| |||||||||||||    
T  52936701 agtttgaacctcaaaccttacatatattatacattgtttctatcaactgagttaagctcac 52936641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 12712039 - 12712086
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||||| ||||||||||||||||||  |||||||| |||||||||||    
T  12712039 catatattatgcattgtctctatcaaatgagttaagttcacgaggacc 12712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 462
Target Start/End: Original strand, 17423178 - 17423237
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    ||||||||||| | ||||| ||||||| |||||||||||||| |||| ||||||| ||||    
T  17423178 agtttgaaccccggaccttgcatatattatgcattgtctctaccaactgagttaacctca 17423237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 465
Target Start/End: Original strand, 49952569 - 49952632
Alignment:
Q  402 aagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||||| | ||||||||||||| ||||||||||   |||||  |||||||||||||||    
T  49952569 aagtttgaaccccggaccttacatatattatgcattgtccaaatcaattgagttaagctcacga 49952632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 54857604 - 54857683
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    |||| ||||||  |||||||||| | ||||| ||||| | ||||||||| | || |||||||| ||||||||||||||||    
T  54857604 ggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtttataccaaccgagctaagctcacgaggacc 54857683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 10336988 - 10337046
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    |||||||||| |||||||||||| || ||||||||||| |  |||| ||||||||||||    
T  10336988 gtttgaaccccgaaccttacatacattatgcattgtctttgccaactgagttaagctca 10337046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 14197433 - 14197495
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||||||| | | ||||||||||| |||||||||| ||| |||| |||||||||| |||||    
T  14197433 gtttgaaccccggatcttacatatattatgcattgtccctaccaactgagttaagcttacgag 14197495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 39146702 - 39146644
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctc 461  Q
    ||||||||| | ||||||||| ||||| ||||||||||  ||||||| |||||||||||    
T  39146702 agtttgaactccgaaccttacttatattatgcattgtccatatcaactgagttaagctc 39146644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 48171940 - 48171882
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctca 462  Q
    |||||||||  ||||||| ||||||| || ||||||||||| |||| ||||||||||||    
T  48171940 gtttgaacctagaaccttgcatatattatacattgtctctaccaactgagttaagctca 48171882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 457
Target Start/End: Original strand, 49233808 - 49233850
Alignment:
Q  415 gaaccttacatatatcatgcattgtctctatcaaccgagttaa 457  Q
    |||| |||||||||| ||||||||||||||||||| |||||||    
T  49233808 gaactttacatatattatgcattgtctctatcaactgagttaa 49233850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 6094195 - 6094240
Alignment:
Q  420 ttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||| ||| ||||| |||||||||||||||||||| ||||    
T  6094195 ttacatatattatgtattgtttctatcaaccgagttaagcttacga 6094240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 466
Target Start/End: Complemental strand, 17134171 - 17134122
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||| |||||| |||||||||||||| |||  ||||||||||||||||    
T  17134171 accttatatatattatgcattgtctctaccaattgagttaagctcacgag 17134122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 21266876 - 21266949
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| || ||||||  |||||||||||||| ||||||||||| || |||  ||| |||||||||| ||||    
T  21266876 tggccgaaattcgaaccccaaaccttacatatattatgcattgtctttaacaattgagctaagctcacggggac 21266949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 21317340 - 21317401
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||||||   ||||| ||||||| |||||||||||||| |||| ||| |||||||||||    
T  21317340 gtttgaacccctgaccttgcatatattatgcattgtctctaccaactgagctaagctcacga 21317401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 22411824 - 22411787
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  22411824 agtttgaaccccgaaccttacatatattatgcattgtc 22411787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 30893431 - 30893495
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||| || || || ||||||||||||||||| |||| |||| |||||| ||||||||||||    
T  30893431 gtttgaaccgtggactttgcatatatcatgcattgt-tctaccaactgagttatgctcacgaggac 30893495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 43034357 - 43034410
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||| ||||||| ||||||||||  || |||| ||||||||||||||||||||    
T  43034357 accttgcatatattatgcattgtccataccaactgagttaagctcacgaggacc 43034410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 43374274 - 43374339
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||| | ||||||| ||||| | ||||||||||  ||||||| ||| |||||||||||||||    
T  43374274 gtttgaactccgaaccttgcatattttatgcattgtccatatcaactgagctaagctcacgaggac 43374339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 45970728 - 45970773
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    ||||||| ||||||||| |||| |||| ||||||||||||||||||    
T  45970728 catatattatgcattgtttctaccaactgagttaagctcacgagga 45970773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 51002334 - 51002281
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||| | ||||||||||| || |||| |||||||||||||||||||    
T  51002334 aaccttgcatattttatgcattgtctataccaactgagttaagctcacgaggac 51002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 7030908 - 7030960
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||| | ||||||||||| || |||| |||||||||||||||||||    
T  7030908 accttgcatattttatgcattgtctataccaactgagttaagctcacgaggac 7030960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 13276175 - 13276123
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| |||||||||| ||| |||  |||||||||||||||||||    
T  13276175 accttgcatatattatgcattgtccctaccaattgagttaagctcacgaggac 13276123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 468
Target Start/End: Complemental strand, 19594291 - 19594231
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    ||||||||  || ||||||||  ||||| | ||||||||||| ||||||||||||||||||    
T  19594291 gaaccctggcccctacatataatatgcaatatctctatcaactgagttaagctcacgagga 19594231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 21935058 - 21935006
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| || ||||||||||| || |||| ||||||| |||||||||||    
T  21935058 accttacatacattatgcattgtctataccaactgagttaaactcacgaggac 21935006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 27550734 - 27550798
Alignment:
Q  403 agtttgaac-cctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||||| |||| ||||| ||||||| ||||||| | ||| ||||| ||||||||||||||||    
T  27550734 agtttgaacacctggaccttgcatatattatgcattatttctttcaactgagttaagctcacgag 27550798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 32223779 - 32223727
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| ||||| |||| |  ||||||||||||||||| ||||||||||    
T  32223779 accttacatacatcatacattattcctatcaaccgagttaagttcacgaggac 32223727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 36203282 - 36203230
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||||||||||  ||||||| ||| |||||||||||||||    
T  36203282 accttgcatatattatgcattgtccttatcaactgagctaagctcacgaggac 36203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 40160844 - 40160792
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| |||| |||||| || |||| || ||||||||||||||||    
T  40160844 accttacatatattatgcgttgtctataccaactgaattaagctcacgaggac 40160792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 463
Target Start/End: Original strand, 40847088 - 40847128
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcac 463  Q
    ||||||| ||| ||||||||||||||| |||||||||||||    
T  40847088 catatattatgtattgtctctatcaactgagttaagctcac 40847128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 44909883 - 44909827
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagct 460  Q
    ||||||||||||||| || ||||||  ||||||||||| || |||| ||||||||||    
T  44909883 gtttgaaccctgaactttgcatatactatgcattgtctttaccaactgagttaagct 44909827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 3650579 - 3650518
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||||| ||||||||||||||| ||||||| | |||| |||| |||||||||||||||    
T  3650579 gtttgaaccccgaaccttacatatattatgcattttttctaccaactgagttaagctcacga 3650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 415 - 468
Target Start/End: Complemental strand, 28084330 - 28084277
Alignment:
Q  415 gaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    ||||||| ||||||| || |||||||||||||||| ||||||||||||||||||    
T  28084330 gaaccttgcatatattattcattgtctctatcaactgagttaagctcacgagga 28084277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 466
Target Start/End: Complemental strand, 42700551 - 42700502
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  42700551 accttgcatatattatgcattgtctctaccaaccgagttaagctcacgag 42700502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 471
Target Start/End: Complemental strand, 27587293 - 27587213
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacct 471  Q
    |||| ||||||  |||||||||| | ||||| ||||||||||||||||||  || |||| ||| |||||||||||||||||    
T  27587293 ggtggtggccggggtttgaaccccggaccttgcatatatcatgcattgtccttaccaactgagctaagctcacgaggacct 27587213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 7553739 - 7553673
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| || ||||| ||||||| |||||||||| ||| |||| ||||||| |||||||||||    
T  7553739 agtttgaaccttggaccttgcatatattatgcattgtccctaccaactgagttaaactcacgaggac 7553673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 469
Target Start/End: Original strand, 13357430 - 13357508
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||| |||||||||  | ||||| ||||||| ||||||||||  || |||| |||||||||||||||||||    
T  13357430 ggtggtggccgaggtttgaacctcgtaccttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 13357508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 18422455 - 18422517
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||||| || ||||||||||||||| ||||||||| ||||||||| || ||||||| |||||    
T  18422455 gtttgaatcccgaaccttacatatattatgcattgtttctatcaactgaattaagcttacgag 18422517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 574447 - 574378
Alignment:
Q  400 cgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| |||| | | ||||||||||||| ||||||||||| ||||||| ||| ||||||||| |||||    
T  574447 cgaagttcgaactccggaccttacatatattatgcattgtctatatcaactgagctaagctcacaaggac 574378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 1877677 - 1877726
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    ||||| ||||||| ||||||||||| ||||||| ||||||||||||||||    
T  1877677 accttgcatatattatgcattgtctatatcaactgagttaagctcacgag 1877726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 8837959 - 8837914
Alignment:
Q  424 atatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||    
T  8837959 atatattatgcattgtccctatcaaccgagttaagttcacgaggac 8837914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 29293244 - 29293171
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||| ||||||||| | | ||||||||||||| ||  ||||||| ||| ||| |||||||||||||||||||    
T  29293244 tggccggagtttgaactccggaccttacatatattatatattgtctatattaactgagttaagctcacgaggac 29293171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 17062354 - 17062406
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||| ||||||| ||||||| |||||||||||||||||||    
T  17062354 accttgcatatattatgtattgtctatatcaactgagttaagctcacgaggac 17062406  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 17586004 - 17585952
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||| ||||||| ||||||| |||||||||||||||||||    
T  17586004 accttgcatatattatgtattgtctatatcaactgagttaagctcacgaggac 17585952  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 32285808 - 32285760
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgt 439  Q
    ||||||| ||||||||||||||| ||||||| ||||||| |||||||||    
T  32285808 ggtgatgtccgaagtttgaacccggaaccttgcatatattatgcattgt 32285760  T

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Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 37015851 - 37015903
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| |||||||||||||| |||| ||| |||||||||||||||    
T  37015851 accttgcatatattatgcattgtctctaccaactgagctaagctcacgaggac 37015903  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 27718895 - 27718962
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||||||| | | ||||| ||||||| ||||||||||  ||||||| ||| ||||||||||||||||    
T  27718895 agtttgaactccggaccttgcatatattatgcattgtccatatcaactgagctaagctcacgaggacc 27718962  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 8999893 - 8999959
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcatt-gtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||| || || ||||||| ||||||| ||||||| |||| ||| |||||||||||||||    
T  8999893 gtttgaaccctggactttgcatatattatgcatttgtctctaccaactgagctaagctcacgaggac 8999959  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 32223900 - 32223946
Alignment:
Q  423 catatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||| ||||||||||||||||||| ||  |||||||||||||||    
T  32223900 catatattatgcattgtctctatcaactgaactaagctcacgaggac 32223946  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 469
Target Start/End: Complemental strand, 44293619 - 44293569
Alignment:
Q  419 cttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| ||||||||||| || |||| ||| |||||||||||||||    
T  44293619 cttacatatattatgcattgtctataccaactgagctaagctcacgaggac 44293569  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 3456812 - 3456884
Alignment:
Q  392 gtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    |||||||  ||||||||||||| ||||||||||||||| |||||||||   ||||||  |||||||| ||||||    
T  3456812 gtgatggttgaagtttgaaccc-gaaccttacatatattatgcattgttcatatcaattgagttaagttcacga 3456884  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 3672618 - 3672683
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||| |||||| ||||| | |||||||||||| | |||| ||||||| ||||| |||||    
T  3672618 gtttgaaccctaaaccttgcatattttatgcattgtctcaaccaactgagttaaactcacaaggac 3672683  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 11709032 - 11708979
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacc 470  Q
    ||||| ||||||| |||||||||| ||| |||| ||| ||||||||||||||||    
T  11709032 accttgcatatattatgcattgtccctaccaactgagctaagctcacgaggacc 11708979  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 39821943 - 39821878
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||   ||||| ||||||| |||||||||| ||| |||| ||| |||||||||||||||    
T  39821943 gtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 39821878  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 5179860 - 5179816
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    |||||||||||||||||| |||||||  |||||| ||||||||||    
T  5179860 tggccgaagtttgaaccccgaaccttgtatatattatgcattgtc 5179816  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 471
Target Start/End: Complemental strand, 6471583 - 6471503
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggacct 471  Q
    |||| ||||||  |||||||||| |||| || ||||||| |||||||||  |||||  | ||||||| |||||||||||||    
T  6471583 ggtggtggccggggtttgaaccccgaacattgcatatattatgcattgttcctatcggctgagttaaactcacgaggacct 6471503  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 11771753 - 11771701
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||| ||||||| ||| ||||||||||||||| ||| |||||| ||||||||    
T  11771753 accttgcatatattatgtattgtctctatcaactgagctaagcttacgaggac 11771701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 464
Target Start/End: Original strand, 15079166 - 15079214
Alignment:
Q  416 aaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||| ||||||| |||||||||| ||| |||| ||||||||||||||    
T  15079166 aaccttgcatatattatgcattgtccctaccaactgagttaagctcacg 15079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 21557479 - 21557427
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||||||||||  ||  ||| |||||||||||||||||||    
T  21557479 accttacatatattatgcattgtccatactaactgagttaagctcacgaggac 21557427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 26932765 - 26932801
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  26932765 gtttgaaccctggaccttgcatatatcatgcattgtc 26932801  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 32115408 - 32115444
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  32115408 gtttgaaccccgaaccttacatatattatgcattgtc 32115444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 37141424 - 37141380
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtc 440  Q
    |||||| ||||||||||| ||||||| ||||||| ||||||||||    
T  37141424 tggccggagtttgaaccccgaaccttgcatatattatgcattgtc 37141380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 41388673 - 41388725
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    ||||||||||||| ||||||||||| || ||||   |||||||||||||||||    
T  41388673 accttacatatattatgcattgtctataccaactaggttaagctcacgaggac 41388725  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 99097 - 99031
Alignment:
Q  403 agtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||||   ||||| ||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  99097 agtttgaaccccagaccttgcatatattatgcattgtccctatcaactgagtcaagctcacgaggac 99031  T

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Target: scaffold1149 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 2391 - 2330
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||||||  |||||| ||||||| |||||||||| ||| |||||||| |||||||||||    
T  2391 gtttgaaccccaaaccttgcatatattatgcattgtccctaccaaccgagctaagctcacga 2330  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 469
Target Start/End: Original strand, 61559 - 61637
Alignment:
Q  391 ggtgatggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||| ||||||  |||||||||||| |||||||||| || ||||||| ||  || |||| |||||||||||||| ||||    
T  61559 ggtggtggccggggtttgaaccctggaccttacatacattatgcattatccttaccaactgagttaagctcacgtggac 61637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 35930 - 35992
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgag 466  Q
    |||||||||||  | |||||||||||  ||||||||| |||||||| ||| ||||||||||||    
T  35930 gtttgaaccctagaacttacatatattgtgcattgtccctatcaactgagctaagctcacgag 35992  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 161200 - 161135
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgaggac 469  Q
    |||||||||| ||||||| ||||| | ||||||||||  || |||| ||||||||||||| |||||    
T  161200 gtttgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacaaggac 161135  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 189974 - 190011
Alignment:
Q  404 gtttgaaccctgaaccttacatatatcatgcattgtct 441  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  189974 gtttgaaccccgaaccttacatatattatgcattgtct 190011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 1075 - 1123
Alignment:
Q  417 accttacatatatcatgcattgtctctatcaaccgagttaagctcacga 465  Q
    ||||||||||||| |||||||||| |||  ||| |||||||||||||||    
T  1075 accttacatatattatgcattgtccctactaactgagttaagctcacga 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 468
Target Start/End: Original strand, 7958 - 8030
Alignment:
Q  396 tggccgaagtttgaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacgagga 468  Q
    |||||||||||| ||| | ||||||||||||||| ||||||| |  ||| || | ||||||| ||||||||||    
T  7958 tggccgaagtttaaactccgaaccttacatatattatgcattattcctaccagcagagttaaactcacgagga 8030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 25444 - 25388
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||||| ||||| ||||||| ||||||||||  || |||| ||||||||||||||    
T  25444 gaaccctggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 25388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 464
Target Start/End: Original strand, 34894 - 34950
Alignment:
Q  408 gaaccctgaaccttacatatatcatgcattgtctctatcaaccgagttaagctcacg 464  Q
    |||||||| ||||| ||||||| ||||||||||  || |||| ||||||||||||||    
T  34894 gaaccctggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 34950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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