View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2145_high_11 (Length: 204)
Name: NF2145_high_11
Description: NF2145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2145_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 1432918 - 1432804
Alignment:
| Q |
18 |
gagtttgatcactgacaaaaatggaatttcagaagaaaagnnnnnnngtgttgtgtaataggaaagatagaatctgtgtagaagctatgtcaagcaatca |
117 |
Q |
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| T |
1432918 |
gagtttgatcactgacaaaaatggaatttcagaagaaaagtttttttgtgttgtgtaataggaaagatagaatctgtgaagaagctatgtcaagcaatca |
1432819 |
T |
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| Q |
118 |
aaccaggtggaataa |
132 |
Q |
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| T |
1432818 |
aaccaggtggaataa |
1432804 |
T |
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