View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2145_low_8 (Length: 253)
Name: NF2145_low_8
Description: NF2145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2145_low_8 |
 |  |
|
| [»] scaffold0218 (1 HSPs) |
 |  |  |
|
| [»] scaffold0063 (1 HSPs) |
 |  |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
|
| [»] scaffold0091 (1 HSPs) |
 |  |  |
|
| [»] scaffold0061 (2 HSPs) |
 |  |  |
|
| [»] scaffold1269 (1 HSPs) |
 |  |  |
|
| [»] scaffold0054 (1 HSPs) |
 |  |  |
|
| [»] scaffold0601 (1 HSPs) |
 |  |  |
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| [»] scaffold0094 (1 HSPs) |
 |  |  |
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| [»] scaffold0145 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0218 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 16675 - 16450
Alignment:
| Q |
18 |
agaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatattttgat |
117 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16675 |
agaaaccctagttgcgacgggatcaagccaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttttct |
16576 |
T |
 |
| Q |
118 |
gtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatgagga |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
16575 |
gtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgaggttaattaattcttaagttatgattgctgttatgagga |
16476 |
T |
 |
| Q |
218 |
agagttccactgaaaaattatgatga |
243 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
16475 |
agagttccactgaaaaattatgatga |
16450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 17959104 - 17959332
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17959104 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaattttagaagaaatcaaggtaagggggagaatctcttcatctctagggtttaatatttt |
17959203 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
17959204 |
gattaagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgacgacgttgttgacgttaattaattcttaagttatgattgctgttatga |
17959303 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
17959304 |
ggaagagttccactgaaaaattatgatga |
17959332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 14057621 - 14057849
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14057621 |
agaagaaaccctagttgcgatgggatcaagcctagctggaaatttcagatgaaatcgaggtaaaggggagaatctcttcatctctagggtttattatttt |
14057720 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
| |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
14057721 |
gctgtagggttgtagaggggttggagtatgagtgttgttatcatggtgatgaggacgttgttgaggttaattaattcttaagttatgattgttgttatga |
14057820 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14057821 |
ggaagagttccactgaaaaattatgatga |
14057849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 16942022 - 16942149
Alignment:
| Q |
17 |
aagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatattttga |
116 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
16942022 |
aagaaaccctagttgcgactggatcaagccaagctggaaatttcataagaaatcgaggtaaggcggagaatctcttcatctctagggtttattattttgc |
16942121 |
T |
 |
| Q |
117 |
tgtagggttgtaaaggggttagagtatg |
144 |
Q |
| |
|
| |||||||||||||||||||||||||| |
|
|
| T |
16942122 |
tatagggttgtaaaggggttagagtatg |
16942149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 243
Target Start/End: Original strand, 21100697 - 21100858
Alignment:
| Q |
79 |
ggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttga |
178 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||| || ||||||| |||||||| |||||||||||||| |||||||||| |||| | |
|
|
| T |
21100697 |
ggggagaatctcttcatatctagggtttaatattttgttgtgggtctgtaaagaggttagaggatgagtgttgttataatggtgatgaaattgttgatag |
21100796 |
T |
 |
| Q |
179 |
cgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
|||| |||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
21100797 |
ggttatttaattcttaagatatga---ttgttatgatcaagaattccactgaaaaattatgatga |
21100858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 240
Target Start/End: Original strand, 5941731 - 5941898
Alignment:
| Q |
71 |
gaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggac |
170 |
Q |
| |
|
|||||||||| |||||||| ||||||| ||||||| ||||||||| ||| ||| | ||||| | |||||| |||||| |||||| |||||||||| |
|
|
| T |
5941731 |
gaggtaagggagagaatctattcatctatagggtt-aatattttgttgtggggctataaagagattagagagtgagtgatgttataatggtgatgaaatt |
5941829 |
T |
 |
| Q |
171 |
gttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatga |
240 |
Q |
| |
|
||| || ||| |||||||||||| ||||||||||||||||| ||| | ||||||| ||||||||||| |
|
|
| T |
5941830 |
attgatg-tgttgtttaattcttaagatatgattgttgttatgatgaaaaattccactaaaaaattatga |
5941898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 14479500 - 14479544
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattt |
113 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
14479500 |
tcgaggtaagggggagaatcttttcatctctagggtttattattt |
14479544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 17793463 - 17793425
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggttta |
107 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17793463 |
tcgaggtaagggggagaatctattcatctctagggttta |
17793425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 19101903 - 19101865
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggttta |
107 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19101903 |
tcgaggtaagggggagaatctattcatctctagggttta |
19101865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 48379074 - 48378847
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
48379074 |
agaagaaaccctagttgcgacgggatcaagccaagctggaaatttcagaagaaatcgaggtaagggg-agaatctcttcatctctagggtttaatatttt |
48378976 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| |
|
|
| T |
48378975 |
gttgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgaggttaattaattcttaagttatgattgctgtcatga |
48378876 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
48378875 |
ggaagagttccactgaaaaattatgatga |
48378847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 13773776 - 13774004
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
13773776 |
agaagaaaccctagttgcgaccggatcaagccaagctgaaaatttcagaagaaatcgaggtaagggatagaatctcttcatctctagggtttattatttt |
13773875 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
13773876 |
gttgtagggttgtaaaggggttatagtatgagtgttgttatgatggtgatgaggacgttgttgaggttaattaattcttaagttatgattgttgttatga |
13773975 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
13773976 |
ggaagagttccactgaaaaattatgatga |
13774004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 15865050 - 15865265
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
15865050 |
agaagaaaccctagttgcaacgggatcaaaccaagctagaaatttcagaagaaatcgaggtaagggggagaatctcttcatctct-------------tt |
15865136 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
15865137 |
gttgtagggttgtaaagaggttagagtatgagtgttgttatgatggtgatgaggacgttgttgaggttaattaattcttaagttatgattgttgttatga |
15865236 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
|||||||||||||| |||||||||||||| |
|
|
| T |
15865237 |
ggaagagttccacttaaaaattatgatga |
15865265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 22612589 - 22612762
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgagg |
168 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
22612589 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattggcttgtggggatgtaaaggggttatagtaggagtgttgttatgatggtgatgaga |
22612688 |
T |
 |
| Q |
169 |
acgttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||| |||| |||||| | |||||||||||||||||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
22612689 |
gcgttgttgaagttaattaattttaaagttatgattgttgttatgaggaggagtttcact-aaaaattatgatga |
22612762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 11657729 - 11657556
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgagg |
168 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||| ||| || ||||||||||||| |||| |||||||||||| ||||||||||| |
|
|
| T |
11657729 |
tcgaggtaagggtgagaatctcttcatttctagggtttaatattttgttgtgaggctgtaaaggggttacagtagaagtgttgttatgctggtgatgagg |
11657630 |
T |
 |
| Q |
169 |
acgttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||| |||| |||||| | ||||||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
11657629 |
acgttgttggggttaattaattttacagttatgattgttgttatgaggaagagtttcact-aaaaattatgatga |
11657556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 13475131 - 13475304
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgagg |
168 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||| | ||| ||| ||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
13475131 |
tcgaggtaaagggaagaatctcttcatctctagggtttaatattctattgtggggctgtaaaggggttatagtaagagtgttgttatgatggtgatgagg |
13475230 |
T |
 |
| Q |
169 |
acgttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||| ||||| |||| |||||| | ||||||||||||||||| |||||||||||| || | |||||||||||||| |
|
|
| T |
13475231 |
acgctgttggggttaattaattttaaagttatgattgttgttgtgaggaagagtttcaat-aaaaattatgatga |
13475304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 26011 - 26239
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26011 |
agaagaaaccctagttgcgacgggatcaagccaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttattatttt |
26110 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
| | |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||| || |||||||||||| |||||||||||||| |
|
|
| T |
26111 |
gctatagggttgtaaaggggttggagtatgagtgttgttatgatggtgatgaggacattgttgaagttaattgattcttaagttaagattgttgttatga |
26210 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
26211 |
ggaagagttccactgaaaaattatgatga |
26239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 132864 - 132636
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
132864 |
agaagaaaccctagttgtgacgggatcaagccaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatttctagggtttattatttt |
132765 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
132764 |
gttgtagggttgtaaaggggttggaatatgagttttgttatgatggtgatgaggacgttgttgaggttaattaattcttaagttatgattgttgttatga |
132665 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
132664 |
ggaagagttccactgaaaaattatgatga |
132636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 51624804 - 51625031
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
51624804 |
agaagaaaccctagttgcgacgagatcaagccaagctggaaatttcagaagaaatcgaggtaaggggg-gaatctcttcatctctaaggtttaatatttt |
51624902 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
51624903 |
gctgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgaggttaattaattcttaagttatgattgttgttatga |
51625002 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
|||||| ||||| |||||||||||||||| |
|
|
| T |
51625003 |
ggaagatttccattgaaaaattatgatga |
51625031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0091 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: scaffold0091
Description:
Target: scaffold0091; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 31330 - 31102
Alignment:
| Q |
15 |
agaagaaaccctagttgcgacgggatcaagtcaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
114 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31330 |
agaagaaaccctagttacgacgggatcaagccaagctggaaatttcagaagaaatcgaggtaagggggagaatctcttcatctctagggtttattatttt |
31231 |
T |
 |
| Q |
115 |
gatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatga |
214 |
Q |
| |
|
| | | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||||||| |
|
|
| T |
31230 |
gtttttgggttgtaaaggggttggagtatgagtgttgttatgatggtgatgaggactttgttgatgttaatttattcttaagttatgattgttgttatga |
31131 |
T |
 |
| Q |
215 |
ggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||||||||||||||| ||||||||| |
|
|
| T |
31130 |
ggaagagttccactgaaaatttatgatga |
31102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 16665 - 16834
Alignment:
| Q |
74 |
gtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgtt |
173 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
16665 |
gtaagggggagaatctcttcatctctagggtttattattttgctgtagggttgtaaaggggttggagtatgagtgttgttatgatggtgatgaggacatt |
16764 |
T |
 |
| Q |
174 |
gttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16765 |
gttgaggttaattaattcttaagttaagattgttgttatgtggaagagttccactgaaaaattatgatga |
16834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 25723 - 25892
Alignment:
| Q |
74 |
gtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggacgtt |
173 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
25723 |
gtaagggggagaatctcttcatctctagggtttattattttgctgtagggttgtaaaggggttggagtatgagtgttgttatgatggtgatgaggacatt |
25822 |
T |
 |
| Q |
174 |
gttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25823 |
gttgaggttaattaattcttaagttaagattgttgttatgtggaagagttccactgaaaaattatgatga |
25892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1269 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1269
Description:
Target: scaffold1269; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 2193 - 2089
Alignment:
| Q |
139 |
agtatgagtgttgttatgatggtgatgaggacgttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattat |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
2193 |
agtatgagtgttgttatgatggtgatgaggacgttgttgaggttaattaattcttaagttatgattgttgttatgaggaagagttccagtgaaaaattat |
2094 |
T |
 |
| Q |
239 |
gatga |
243 |
Q |
| |
|
||||| |
|
|
| T |
2093 |
gatga |
2089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 71374 - 71200
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaagg-ggttagagtatgagtgttgttatgatggtgatgag |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||| || ||| ||| | |||||| ||||| ||||| |||| |||||||||||||||| |
|
|
| T |
71374 |
tcgaggtaagggggagaatctcttcatctcttgggtttactattctgttgtggggctttaaaggaggttaatgtatgcgtgtggttatgatggtgatgaa |
71275 |
T |
 |
| Q |
168 |
gacgttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
71274 |
gacgttggtgggtttaattaattcttaagttatgattattgttatgaggaagagttccact-aaaaattatgatga |
71200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 44583992 - 44584163
Alignment:
| Q |
71 |
gaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggac |
170 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||| || ||| ||| |||||| | |||| |||| ||||||||||||||||||||||||| |
|
|
| T |
44583992 |
gaggtaagggggagaatctctccgtctctagggtttaatattctgttgtggggatgtaaatgagttatagtagcagtgttgttatgatggtgatgaggat |
44584091 |
T |
 |
| Q |
171 |
gttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
||||||| |||| |||||| | ||||||||||||||||||||||||| || | |||| |||||||||||||| |
|
|
| T |
44584092 |
gttgttggggttaattaattttaaagttatgattgttgttatgaggaaaagcttcact-aaaaattatgatga |
44584163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 13362102 - 13362067
Alignment:
| Q |
72 |
aggtaagggggagaatctcttcatctctagggttta |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
13362102 |
aggtaagggggagaatctcttcatctctagggttta |
13362067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 23651858 - 23651896
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggttta |
107 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23651858 |
tcgaggtaagggggagaatctattcatctctagggttta |
23651896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 241
Target Start/End: Original strand, 20145859 - 20146027
Alignment:
| Q |
72 |
aggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaagggg-ttagagtatgagtgttgttatgatggtgatgaggac |
170 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| |||| || ||| ||| | |||||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
20145859 |
aggtaaggggaagaatctcttcatctcttgggtttactattctgttgtggggctttaaagggggttaatgtatgagtgtggttatgatggtgatgaggac |
20145958 |
T |
 |
| Q |
171 |
gttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgat |
241 |
Q |
| |
|
||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
20145959 |
gttgttgggttta-ttaattattaagttatgattattgttatgaggaagagttccact-aaaaattatgat |
20146027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 241
Target Start/End: Complemental strand, 22186980 - 22186812
Alignment:
| Q |
72 |
aggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaagggg-ttagagtatgagtgttgttatgatggtgatgaggac |
170 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| |||| || ||| ||| | |||||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
22186980 |
aggtaaggggaagaatctcttcatctcttgggtttactattctgttgtggggctttaaagggggttaatgtatgagtgtggttatgatggtgatgaggac |
22186881 |
T |
 |
| Q |
171 |
gttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgat |
241 |
Q |
| |
|
||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22186880 |
gttgttgggttta-ttaattattaagttatgattattgttatgaggaagagttccact-aaaaattatgat |
22186812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 15119029 - 15118875
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgagg |
168 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||| ||| || ||||||||||||| | || |||||||||||||| || |||||| |
|
|
| T |
15119029 |
tcgaggtaaggggaagaatctcttcatctctaggatttaatatttgtttgtgggaatgtaaaggggttataatagtagtgttgttatgatagtaatgagg |
15118930 |
T |
 |
| Q |
169 |
acgttgttgacgttacttaattcttaagttatgattgttgttatgaggaagagtt |
223 |
Q |
| |
|
||||||||| |||| |||||| | ||||||||||||||||||| |||||||||| |
|
|
| T |
15118929 |
gcgttgttgaagttaattaattttaaagttatgattgttgttataaggaagagtt |
15118875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 7680603 - 7680701
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgag |
167 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||| ||||| | || |||||||||||||||| ||| ||||||||| |
|
|
| T |
7680603 |
tcgaggtaagggggagaatctcttcatgtctagggtttattatttcattgtggggctgtaatgatgtcggagtatgagtgttgttgtgacggtgatgag |
7680701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 19545089 - 19545160
Alignment:
| Q |
18 |
agaaaccctagttgcgacgggatcaagtcaag-ctggaaatttcagaagaaatcgaggtaagggggagaatct |
89 |
Q |
| |
|
||||||||||| |||||||| |||||| ||| |||||| |||| |||| ||||||||||||||||||||||| |
|
|
| T |
19545089 |
agaaaccctagctgcgacggaatcaagccaaaactggaattttc-gaaggaatcgaggtaagggggagaatct |
19545160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 17338906 - 17338733
Alignment:
| Q |
71 |
gaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgaggac |
170 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||||||||| ||| ||| ||||||| | |||||| ||||||| |||||| |||||||||| |
|
|
| T |
17338906 |
gaggtaaatgggagaatctctttatctctagggtttaatattttgttgtggggatgtaaagagattagagaatgagtggtgttataatggtgatgaaatt |
17338807 |
T |
 |
| Q |
171 |
gttgttgacgttacttaa-ttcttaagttatgattgttgttatgaggaagagttccactgaaaaattatgatga |
243 |
Q |
| |
|
|||| | | | |||| || ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
17338806 |
gttggttgggatgtttaattttttaagatatgattgttgttatgatgaagaattccactgaaaaattatgatga |
17338733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 18554665 - 18554736
Alignment:
| Q |
18 |
agaaaccctagttgcgacgggatcaagtcaa-gctggaaatttcagaagaaatcgaggtaagggggagaatct |
89 |
Q |
| |
|
||||||||||| |||||||| |||||| ||| ||||||| |||| |||| |||||||||||||||||||||| |
|
|
| T |
18554665 |
agaaaccctagctgcgacggaatcaagccaaagctggaattttc-gaagggatcgaggtaagggggagaatct |
18554736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 8808830 - 8808796
Alignment:
| Q |
71 |
gaggtaagggggagaatctcttcatctctagggtt |
105 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8808830 |
gaggtaagggggagaatctattcatctctagggtt |
8808796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 16282960 - 16282998
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggttta |
107 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
16282960 |
tcgaggtaagggggagaatctattcatctatagggttta |
16282998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 11332652 - 11332612
Alignment:
| Q |
65 |
gaaatcgaggtaagggggagaatctcttcatctctagggtt |
105 |
Q |
| |
|
||||| |||||||| |||||||||||||||||| ||||||| |
|
|
| T |
11332652 |
gaaattgaggtaagagggagaatctcttcatctatagggtt |
11332612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 13268188 - 13268117
Alignment:
| Q |
18 |
agaaaccctagttgcgacgggatcaagtcaa-gctggaaatttcagaagaaatcgaggtaagggggagaatct |
89 |
Q |
| |
|
||||||||||| || ||||| |||||| ||| ||||||| ||||| | | ||||||||||||||||||||||| |
|
|
| T |
13268188 |
agaaaccctagctgggacggaatcaagccaaagctggaattttca-agggaatcgaggtaagggggagaatct |
13268117 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 26859183 - 26859281
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatgag |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||| | | | |||||||||| || ||||||||||||||| ||| || |||||| |
|
|
| T |
26859183 |
tcgaggtaagggggagaatctcttcatctctagggcttattattttattttcgagttgtaaaggtgtcgaagtatgagtgttgttgtgacggcgatgag |
26859281 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 22554017 - 22553981
Alignment:
| Q |
71 |
gaggtaagggggagaatctcttcatctctagggttta |
107 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22554017 |
gaggtaagggggagaatctattcatctctagggttta |
22553981 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 10454015 - 10454087
Alignment:
| Q |
18 |
agaaaccctagttgcgacgggatcaagtc-aagctggaaatttcagaagaaatcgaggtaagggggagaatct |
89 |
Q |
| |
|
||||||||||||||||||| |||||| | |||||| ||||||| || ||||||||||||||| ||||||| |
|
|
| T |
10454015 |
agaaaccctagttgcgacgaaatcaagccaaagctgaaaatttccaaaagaatcgaggtaaggggaagaatct |
10454087 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 22484820 - 22484906
Alignment:
| Q |
79 |
ggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgttatgatggtgatg |
165 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||| ||| ||||||||||| ||| |||||||| ||||||| | ||||||||| |
|
|
| T |
22484820 |
ggggagaatctcttcatctttagggtttatcattttattgtgaggttgtaaaggtgttggagtatgaatgttgttgtaatggtgatg |
22484906 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 23950024 - 23950064
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaat |
109 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23950024 |
tcgaggtaagggggagaatcttttcatctctagggtttaat |
23950064 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 24829915 - 24829958
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattt |
113 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||| ||||| |
|
|
| T |
24829915 |
tcgaggtaagggg-agaatcgcttcatctctagggtttattattt |
24829958 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0601 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0601
Description:
Target: scaffold0601; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 4129 - 4213
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgatgtagggttgtaaaggggttagagtatgagtgttgtt |
153 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||||||||| |||||| ||| ||| ||||||| || || || ||||||||||| |
|
|
| T |
4129 |
tcgaggtaagggagagaatctcttcatccttagggtttattattttattgtggggctgtaaagaagtcagggtttgagtgttgtt |
4213 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0094 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0094
Description:
Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 2445 - 2516
Alignment:
| Q |
18 |
agaaaccctagttgcgacgggatcaagtcaa-gctggaaatttcagaagaaatcgaggtaagggggagaatct |
89 |
Q |
| |
|
||||||||||| || ||||| |||||| ||| ||||||| ||||| ||| ||||||||||||||||||||||| |
|
|
| T |
2445 |
agaaaccctagctgtgacggaatcaagccaaagctggaattttca-aaggaatcgaggtaagggggagaatct |
2516 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0145 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0145
Description:
Target: scaffold0145; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 14755 - 14717
Alignment:
| Q |
69 |
tcgaggtaagggggagaatctcttcatctctagggttta |
107 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
14755 |
tcgaggtaagggggagaatctattcatctatagggttta |
14717 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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