View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21461_high_4 (Length: 356)
Name: NF21461_high_4
Description: NF21461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21461_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 30347251 - 30346914
Alignment:
| Q |
1 |
agataatagatcgcatcataattttccccttcaagtgatatttgcctctcttctacaataagttatcaacaatatttaattattatttcttatctatctt |
100 |
Q |
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| T |
30347251 |
agataatagatcgcatcataattttccccttcaagtgatatttgcctctcttctacaataagttatcaacaatatttaattattatttcttatctatctt |
30347152 |
T |
|
| Q |
101 |
ttccttgtaattggttagtttatgaaatacataatttatattttatttgaataaaagcccttatatatccaatgctcctttttgtttacttgttttggac |
200 |
Q |
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| T |
30347151 |
ttccttgtaattggttagtttatgaaatacataatttatattttatttgaataaaagcccttatatatccaatgctcctttttgtttacttgttttggac |
30347052 |
T |
|
| Q |
201 |
tcgatctaggagtattgcattccaagcaaacgtccaaataaatctacacctcaagaagattgagaccaaataaatctgatatatactatttcttcaatat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30347051 |
tcgatctaggagtattgcattccaagcaaacgtccaaataaatctacacctcaagaagattgagaccaaataaatctgatatatactatttcttcaatat |
30346952 |
T |
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| Q |
301 |
gaagaagcatcattgattgtaagaatcaaaaatgggtt |
338 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
30346951 |
gaagaagcatcattgattgtaagaatcaaaaatgggtt |
30346914 |
T |
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