View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21462_high_24 (Length: 268)
Name: NF21462_high_24
Description: NF21462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21462_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 32681851 - 32682082
Alignment:
| Q |
16 |
atgaactggcaataaatactcatatcattattttatatattttgtttgtagatgaaatcacaaacgccatataaaactcatacacacaactgtgtggtct |
115 |
Q |
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| T |
32681851 |
atgagctggcaataaatactcat--cattattttatattttttgtttgtagatgaaatcacaaacgccatttaaaactcatacacacaagtgtatggt-t |
32681947 |
T |
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| Q |
116 |
ttagtttgaactcaataacattgttcaatctagatagtaatatcgacgtagttagttgaactaattcttatggacaatttaatattttaatggatttata |
215 |
Q |
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| T |
32681948 |
ttagtttgaactcaataacattgttcaatctagttagtaatatcgacatagttagttgaactaatttttatggacaatttaatattttaatggatttata |
32682047 |
T |
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| Q |
216 |
tgcaaactatagtgtgccaattcacacgtctatat |
250 |
Q |
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| T |
32682048 |
tgcaaactatagtgtgccaattcacacgtctatat |
32682082 |
T |
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