View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21464_high_1 (Length: 469)
Name: NF21464_high_1
Description: NF21464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21464_high_1 |
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Alignment Details
Target: chr4 (Bit Score: 436; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 1 - 464
Target Start/End: Original strand, 29704585 - 29705048
Alignment:
| Q |
1 |
ccaaagaaggtagagtgtgtatcttcggctattctagttgaaaaggatggaacttctggtgactctggagctgaaaatgagatctgcatccaatcctttg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
29704585 |
ccaaagaaggtagagtgtgtatcttcggctattctagttgaaaaggatggaacttctggtgactctggagctgaaaatgaggtctgcatccaatcctttg |
29704684 |
T |
|
| Q |
101 |
aaaacgaaaaagaaagcaacggagttgaagatgtcattctacaactctcaatgttggatgtagctgcaaagaaagtagaaggtcagaaggatacttctga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
29704685 |
aaaacgaaaaagaaagcaacggagttgaagatgtcattctacaactctcaatgttggatgtagctgcaaagaaagtagaagatcagaaggatacttctga |
29704784 |
T |
|
| Q |
201 |
gaaacaggaagctgaagcacaaaccaaggaacatgcagcagaggactacactgagtttgtggtttctgagaagataaagggagaacccgtttgctcagct |
300 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
29704785 |
gaaacaggaagctgaagcacaaaccgaggaacatgcagcagaggactacactgagtttgtggtttctgagaagataaagggggaacccgtttgctcagct |
29704884 |
T |
|
| Q |
301 |
cagtcagaaatcaaggagattgagtgtggtactggcaatcctactgtgatgaaagaaaactcgaaaaccatcgatgttaagactgctagtttgcgggttc |
400 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
29704885 |
cattcagaaatcaaggagattgagtgtggtactggcaatcctactgtgatgaaagaaaactcgaaaaccatcaatgttaagactgctagtttgcgggttc |
29704984 |
T |
|
| Q |
401 |
tcaagaagttggtgaggaagaagttagaagaaaaaacaaacatgattaataatgatgatgtcca |
464 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
29704985 |
tcaagaagttggtgaggaagaagttagaagaaaaaacaaacatggttaataatgatgatgtcca |
29705048 |
T |
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