View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21468_high_2 (Length: 450)
Name: NF21468_high_2
Description: NF21468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21468_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 1 - 450
Target Start/End: Original strand, 39608962 - 39609411
Alignment:
| Q |
1 |
gttataaatatccaatttgtaatcctcaagtaaaaacccaaaaatactcggaaggtataaccgctccaaccccaagcatggcagatttgatggtaatgaa |
100 |
Q |
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| T |
39608962 |
gttataaatatccaatttgtaatcctcaagtaaaaacccaaaaatactcggaaggtacaaccgctccaaccccaagcatggcagatttgatggtaatgaa |
39609061 |
T |
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| Q |
101 |
ggagattgaagacaaagcgtccaaactcagaatcttcaggtatatatatcgatcaacttcttctttactttcttgttttctgtggttctacgtaaattgt |
200 |
Q |
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| T |
39609062 |
ggagattgaagacaaagcgtccaaactcagaatcttcaggtatatatatcgatcaacttcttctttactttcttgttttctgtggttctacgtaaatgat |
39609161 |
T |
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| Q |
201 |
tcaaaccttaggtagttggcgattataacaaatttcttgttactttattttgtatgctgaagtgacgacgaagatgtttttcgaatggagaatcctaaat |
300 |
Q |
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| T |
39609162 |
tcaaaccttaggtagttggctattataacaaatttcttgttactttattttgtatgctgaagtgacgacgtagatgtttttcgaatggagaatcctaaat |
39609261 |
T |
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| Q |
301 |
ttgatactatctttgagttcgatactcaggtaaataaaatgtttgttttactgatttatgttagattttcaaagattatatgtaagttgttgtgagattt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39609262 |
ttgatactatctttgagttcgatactcaggtaaataaaatgtttgttttactgatttatgttagattttcaaagattatatgtaagttgttgtgagattt |
39609361 |
T |
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| Q |
401 |
gttagatttgaccaggttaaattggatggttgttttaggaagtgggtaat |
450 |
Q |
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| T |
39609362 |
gttagatttgaccaggttaaattggatggttgttttaggaagtgggtaat |
39609411 |
T |
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