View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21469_high_14 (Length: 349)

Name: NF21469_high_14
Description: NF21469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21469_high_14
NF21469_high_14
[»] chr7 (47 HSPs)
chr7 (1-344)||(28136110-28136437)
chr7 (209-339)||(28136030-28136160)
chr7 (144-210)||(22696349-22696415)
chr7 (143-210)||(28646998-28647065)
chr7 (131-210)||(48125137-48125218)
chr7 (145-210)||(25956271-25956336)
chr7 (144-210)||(5579211-5579278)
chr7 (151-210)||(26459394-26459454)
chr7 (143-210)||(29385719-29385787)
chr7 (143-210)||(38374575-38374643)
chr7 (143-210)||(2751300-2751367)
chr7 (149-204)||(7262252-7262307)
chr7 (143-201)||(15137594-15137653)
chr7 (143-210)||(22299878-22299945)
chr7 (145-204)||(47541419-47541478)
chr7 (151-204)||(31835230-31835284)
chr7 (174-207)||(21050148-21050181)
chr7 (143-200)||(23330844-23330901)
chr7 (147-208)||(46279048-46279109)
chr7 (143-206)||(2882986-2883050)
chr7 (151-210)||(22760895-22760955)
chr7 (151-210)||(23552150-23552210)
chr7 (158-210)||(23637007-23637059)
chr7 (168-203)||(674557-674592)
chr7 (143-210)||(7175967-7176034)
chr7 (143-210)||(7275306-7275373)
chr7 (147-210)||(11997878-11997941)
chr7 (149-204)||(12211646-12211701)
chr7 (143-210)||(17212082-17212149)
chr7 (143-210)||(22119917-22119984)
chr7 (151-201)||(37162334-37162385)
chr7 (143-210)||(40543015-40543082)
chr7 (143-201)||(42711999-42712058)
chr7 (151-208)||(4566412-4566470)
chr7 (146-204)||(17197058-17197116)
chr7 (144-197)||(21558173-21558227)
chr7 (72-117)||(28135996-28136042)
chr7 (151-189)||(29538546-29538584)
chr7 (147-204)||(48039627-48039685)
chr7 (151-200)||(18847407-18847456)
chr7 (174-207)||(21035176-21035209)
chr7 (143-203)||(21574207-21574268)
chr7 (143-195)||(654809-654861)
chr7 (143-210)||(5273566-5273634)
chr7 (151-210)||(7721401-7721461)
chr7 (151-210)||(43215216-43215276)
chr7 (167-210)||(44628183-44628227)
[»] chr1 (57 HSPs)
chr1 (131-210)||(6127949-6128030)
chr1 (143-207)||(39964540-39964604)
chr1 (143-210)||(39714755-39714822)
chr1 (144-206)||(44486135-44486197)
chr1 (143-210)||(31605824-31605892)
chr1 (143-210)||(37047017-37047084)
chr1 (131-210)||(38939234-38939315)
chr1 (143-210)||(15581118-15581185)
chr1 (143-210)||(34228906-34228973)
chr1 (143-210)||(39012323-39012390)
chr1 (145-210)||(4825003-4825069)
chr1 (144-210)||(24217003-24217069)
chr1 (143-210)||(17297016-17297085)
chr1 (143-206)||(36428748-36428812)
chr1 (143-207)||(41470587-41470651)
chr1 (151-210)||(43445995-43446055)
chr1 (150-210)||(44417446-44417505)
chr1 (143-207)||(49101746-49101809)
chr1 (145-204)||(1138610-1138669)
chr1 (143-210)||(8077672-8077739)
chr1 (143-210)||(25237094-25237161)
chr1 (143-210)||(45859148-45859215)
chr1 (143-210)||(46607835-46607902)
chr1 (151-200)||(8904456-8904506)
chr1 (143-200)||(3334811-3334868)
chr1 (143-204)||(15059507-15059568)
chr1 (154-207)||(52289735-52289788)
chr1 (143-210)||(9500460-9500527)
chr1 (145-209)||(20487297-20487361)
chr1 (146-206)||(22585185-22585245)
chr1 (151-203)||(40802180-40802232)
chr1 (151-201)||(2799903-2799954)
chr1 (143-210)||(4621342-4621409)
chr1 (143-210)||(16539633-16539700)
chr1 (151-210)||(19480559-19480618)
chr1 (143-210)||(24674418-24674485)
chr1 (150-197)||(26608219-26608266)
chr1 (143-210)||(30677201-30677268)
chr1 (143-210)||(32729570-32729637)
chr1 (151-201)||(33700757-33700808)
chr1 (143-209)||(24857808-24857873)
chr1 (143-200)||(51814536-51814594)
chr1 (143-184)||(7946895-7946936)
chr1 (151-204)||(17447305-17447358)
chr1 (143-184)||(18646904-18646945)
chr1 (151-203)||(45266873-45266926)
chr1 (177-210)||(47360524-47360557)
chr1 (145-210)||(48400204-48400269)
chr1 (143-195)||(2537738-2537790)
chr1 (151-210)||(8177166-8177226)
chr1 (151-210)||(9165179-9165239)
chr1 (178-210)||(9926288-9926320)
chr1 (151-210)||(19940856-19940916)
chr1 (144-200)||(20907367-20907423)
chr1 (146-210)||(25496596-25496660)
chr1 (146-209)||(39966126-39966190)
chr1 (151-210)||(40810499-40810559)
[»] chr8 (42 HSPs)
chr8 (143-210)||(40136940-40137006)
chr8 (145-210)||(6530839-6530904)
chr8 (143-204)||(21239384-21239445)
chr8 (143-207)||(34778770-34778834)
chr8 (143-210)||(15974934-15975000)
chr8 (143-210)||(16317643-16317710)
chr8 (144-210)||(18897198-18897265)
chr8 (143-210)||(26168953-26169020)
chr8 (143-210)||(41070790-41070857)
chr8 (144-210)||(22268911-22268977)
chr8 (143-210)||(11793497-11793565)
chr8 (142-210)||(18128542-18128610)
chr8 (143-210)||(3734728-3734795)
chr8 (144-210)||(6536552-6536619)
chr8 (167-210)||(9126584-9126627)
chr8 (144-210)||(34639313-34639378)
chr8 (143-207)||(28783095-28783160)
chr8 (143-204)||(34694681-34694742)
chr8 (143-210)||(2203524-2203592)
chr8 (178-210)||(5438450-5438482)
chr8 (143-210)||(16852372-16852440)
chr8 (143-210)||(14632983-14633050)
chr8 (143-210)||(27746440-27746507)
chr8 (144-210)||(28787473-28787540)
chr8 (143-210)||(34237760-34237827)
chr8 (143-210)||(39349285-39349352)
chr8 (144-210)||(28193503-28193569)
chr8 (173-207)||(29695334-29695368)
chr8 (143-204)||(3403607-3403668)
chr8 (143-204)||(3794826-3794887)
chr8 (177-210)||(22779687-22779720)
chr8 (151-199)||(33017257-33017306)
chr8 (143-210)||(968394-968462)
chr8 (178-210)||(1458405-1458437)
chr8 (178-210)||(2428112-2428144)
chr8 (143-210)||(3305164-3305232)
chr8 (143-210)||(4718674-4718741)
chr8 (176-208)||(13122565-13122597)
chr8 (151-210)||(18540330-18540390)
chr8 (143-210)||(19703463-19703531)
chr8 (143-210)||(26688897-26688965)
chr8 (143-187)||(36034497-36034541)
[»] chr2 (41 HSPs)
chr2 (131-210)||(6099481-6099562)
chr2 (147-210)||(18825373-18825436)
chr2 (145-210)||(26176304-26176369)
chr2 (143-210)||(7250261-7250328)
chr2 (143-210)||(8192456-8192523)
chr2 (143-210)||(28194238-28194305)
chr2 (145-210)||(16525210-16525275)
chr2 (143-207)||(41908614-41908679)
chr2 (152-210)||(12517738-12517797)
chr2 (143-210)||(26482125-26482192)
chr2 (148-210)||(3697381-3697443)
chr2 (143-197)||(30943134-30943188)
chr2 (161-210)||(43963983-43964032)
chr2 (144-207)||(342430-342493)
chr2 (143-210)||(13747610-13747677)
chr2 (144-207)||(27967126-27967189)
chr2 (131-210)||(28105539-28105620)
chr2 (143-204)||(4618790-4618851)
chr2 (143-210)||(30359686-30359753)
chr2 (143-210)||(37480107-37480175)
chr2 (143-210)||(42327371-42327439)
chr2 (143-210)||(42602586-42602654)
chr2 (143-210)||(10582095-10582162)
chr2 (151-201)||(19016072-19016123)
chr2 (143-210)||(19605950-19606017)
chr2 (143-210)||(25293191-25293258)
chr2 (143-210)||(29698172-29698239)
chr2 (131-210)||(32106598-32106680)
chr2 (151-201)||(45026784-45026835)
chr2 (143-209)||(15037985-15038051)
chr2 (144-210)||(25384568-25384634)
chr2 (143-204)||(17324797-17324858)
chr2 (143-204)||(40591214-40591275)
chr2 (151-210)||(19244141-19244201)
chr2 (151-210)||(19322800-19322860)
chr2 (143-210)||(21213801-21213869)
chr2 (143-210)||(23052499-23052567)
chr2 (163-210)||(29503303-29503351)
chr2 (151-210)||(30410533-30410593)
chr2 (143-203)||(30466935-30466995)
chr2 (143-210)||(43374430-43374497)
[»] chr3 (46 HSPs)
chr3 (143-212)||(40777043-40777112)
chr3 (144-210)||(11092147-11092213)
chr3 (146-210)||(15034377-15034441)
chr3 (150-204)||(4252508-4252562)
chr3 (144-210)||(40268521-40268587)
chr3 (144-210)||(53863845-53863911)
chr3 (143-210)||(39041957-39042024)
chr3 (131-207)||(43303793-43303871)
chr3 (144-210)||(31714349-31714415)
chr3 (146-210)||(18316477-18316542)
chr3 (145-210)||(35623246-35623310)
chr3 (144-204)||(26158849-26158909)
chr3 (143-210)||(47236947-47237015)
chr3 (143-210)||(42799724-42799791)
chr3 (145-207)||(34844406-34844468)
chr3 (163-210)||(16900677-16900725)
chr3 (143-210)||(19716229-19716297)
chr3 (151-210)||(28703388-28703448)
chr3 (143-210)||(7485630-7485697)
chr3 (143-210)||(26108317-26108384)
chr3 (151-201)||(27093345-27093396)
chr3 (143-207)||(28834947-28835013)
chr3 (143-210)||(30807258-30807325)
chr3 (143-210)||(32151449-32151516)
chr3 (143-210)||(35492936-35493003)
chr3 (143-210)||(37944775-37944841)
chr3 (143-210)||(42430366-42430432)
chr3 (145-204)||(50731341-50731399)
chr3 (145-204)||(50781455-50781513)
chr3 (143-210)||(53234015-53234082)
chr3 (143-204)||(44069796-44069858)
chr3 (144-210)||(48977413-48977479)
chr3 (150-207)||(10682927-10682984)
chr3 (145-210)||(40940850-40940915)
chr3 (143-171)||(1178236-1178264)
chr3 (161-197)||(5664585-5664621)
chr3 (151-210)||(10445123-10445183)
chr3 (143-202)||(14186687-14186747)
chr3 (151-210)||(30311338-30311398)
chr3 (168-204)||(36803093-36803129)
chr3 (151-206)||(37788449-37788505)
chr3 (143-203)||(40133554-40133614)
chr3 (146-210)||(52821743-52821807)
chr3 (151-207)||(53167777-53167832)
chr3 (151-206)||(53412981-53413037)
chr3 (143-210)||(54990734-54990802)
[»] chr4 (50 HSPs)
chr4 (154-210)||(56409983-56410039)
chr4 (144-207)||(25414192-25414255)
chr4 (131-210)||(37980110-37980191)
chr4 (151-210)||(32992644-32992704)
chr4 (143-210)||(46295129-46295197)
chr4 (143-210)||(21344849-21344916)
chr4 (151-210)||(29195127-29195186)
chr4 (143-210)||(40058957-40059024)
chr4 (143-210)||(7949430-7949498)
chr4 (151-210)||(37109335-37109395)
chr4 (143-206)||(51622521-51622585)
chr4 (148-207)||(4686110-4686168)
chr4 (163-210)||(25434655-25434702)
chr4 (143-210)||(25852239-25852306)
chr4 (143-210)||(37492694-37492761)
chr4 (143-210)||(49287883-49287950)
chr4 (168-210)||(38206127-38206169)
chr4 (151-203)||(4249216-4249269)
chr4 (177-210)||(5998698-5998731)
chr4 (143-204)||(34844863-34844924)
chr4 (150-203)||(37455609-37455661)
chr4 (143-204)||(41621701-41621762)
chr4 (151-210)||(23377988-23378048)
chr4 (150-210)||(42281217-42281277)
chr4 (144-206)||(5795386-5795449)
chr4 (143-210)||(20078089-20078156)
chr4 (145-209)||(25969607-25969673)
chr4 (143-210)||(27528900-27528967)
chr4 (173-208)||(27908538-27908573)
chr4 (179-210)||(31141356-31141387)
chr4 (143-210)||(33992651-33992718)
chr4 (143-210)||(34835554-34835621)
chr4 (165-204)||(40252329-40252368)
chr4 (131-207)||(47183357-47183435)
chr4 (131-203)||(55256161-55256235)
chr4 (145-203)||(40307574-40307631)
chr4 (145-210)||(7093401-7093466)
chr4 (145-210)||(7392070-7392135)
chr4 (143-207)||(8325355-8325420)
chr4 (144-209)||(27971897-27971962)
chr4 (145-210)||(28929704-28929768)
chr4 (151-210)||(2622379-2622439)
chr4 (143-183)||(5609307-5609347)
chr4 (143-210)||(8030180-8030248)
chr4 (150-210)||(9646328-9646388)
chr4 (151-210)||(37274443-37274503)
chr4 (145-197)||(38740888-38740940)
chr4 (151-210)||(38869800-38869860)
chr4 (151-210)||(46329196-46329256)
chr4 (143-210)||(55427176-55427244)
[»] chr6 (25 HSPs)
chr6 (143-210)||(9208277-9208344)
chr6 (147-207)||(6691531-6691591)
chr6 (144-200)||(9583408-9583464)
chr6 (143-210)||(28028562-28028629)
chr6 (143-207)||(7484236-7484300)
chr6 (147-210)||(17149565-17149628)
chr6 (143-210)||(33499499-33499567)
chr6 (151-210)||(3907566-3907625)
chr6 (143-210)||(11448896-11448963)
chr6 (143-210)||(15360203-15360270)
chr6 (143-210)||(24762384-24762451)
chr6 (177-210)||(6384013-6384046)
chr6 (150-203)||(10007212-10007265)
chr6 (151-210)||(12188287-12188347)
chr6 (143-210)||(654251-654318)
chr6 (167-210)||(28741970-28742013)
chr6 (145-207)||(3433580-3433642)
chr6 (144-210)||(9239000-9239066)
chr6 (143-204)||(10377746-10377807)
chr6 (143-204)||(13753271-13753332)
chr6 (178-210)||(22683-22715)
chr6 (144-204)||(1373114-1373174)
chr6 (144-204)||(1380862-1380922)
chr6 (144-200)||(3869738-3869794)
chr6 (143-210)||(20863407-20863475)
[»] chr5 (29 HSPs)
chr5 (131-207)||(16172946-16173024)
chr5 (143-210)||(19145516-19145583)
chr5 (144-210)||(15485398-15485463)
chr5 (145-210)||(36895450-36895515)
chr5 (151-210)||(16457842-16457902)
chr5 (143-210)||(11926607-11926674)
chr5 (143-210)||(33709606-33709673)
chr5 (156-210)||(31669014-31669068)
chr5 (143-209)||(37421318-37421384)
chr5 (151-207)||(3315250-3315307)
chr5 (143-204)||(27498836-27498897)
chr5 (143-204)||(40330664-40330725)
chr5 (155-210)||(84856-84912)
chr5 (178-210)||(5943893-5943925)
chr5 (144-204)||(8780509-8780569)
chr5 (151-206)||(14285197-14285253)
chr5 (143-210)||(16773839-16773907)
chr5 (150-210)||(31206267-31206327)
chr5 (145-199)||(1279034-1279089)
chr5 (143-210)||(8484766-8484833)
chr5 (143-210)||(32059545-32059612)
chr5 (179-210)||(32340349-32340380)
chr5 (143-210)||(38684233-38684300)
chr5 (176-210)||(17648980-17649014)
chr5 (144-210)||(31288052-31288118)
chr5 (149-210)||(33025505-33025566)
chr5 (145-190)||(36294103-36294148)
chr5 (143-210)||(30883174-30883242)
chr5 (151-206)||(34984842-34984898)
[»] scaffold0576 (1 HSPs)
scaffold0576 (143-210)||(5187-5254)
[»] scaffold0172 (1 HSPs)
scaffold0172 (143-203)||(15753-15814)
[»] scaffold0460 (1 HSPs)
scaffold0460 (145-209)||(8286-8350)
[»] scaffold0189 (1 HSPs)
scaffold0189 (143-207)||(17700-17764)
[»] scaffold0199 (1 HSPs)
scaffold0199 (143-210)||(8512-8579)
[»] scaffold0026 (1 HSPs)
scaffold0026 (143-210)||(97471-97538)
[»] scaffold0019 (1 HSPs)
scaffold0019 (143-210)||(161834-161901)
[»] scaffold0065 (1 HSPs)
scaffold0065 (145-210)||(12221-12287)
[»] scaffold0102 (1 HSPs)
scaffold0102 (143-184)||(39143-39184)
[»] scaffold0258 (1 HSPs)
scaffold0258 (143-210)||(15299-15367)


Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 28136110 - 28136437
Alignment:
Q  1 tccttgttcattcttaattttaataacagtgaactactgtttagttgtgtgttgttgatgtacatcacatgcaattgaccgatcttacaaatttctagtc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28136110 tccttgttcattcttaattttaataacagtgaactactgtttagttgtgtgttgttgatgtacatcacatgcaattgaccgatcttacaaatttctagtc 28136209  T
Q  101 ctggcacgagcgggatgcgnnnnnnnnnnnaagaagccaaacgcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactc 200  Q
    |||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||                |||||    
T  28136210 ctggcacgagcgggatgcgtttttttttttaagaagccaaacgcccaccgaaattggcaccagggagaatctaacttga----------------cactc 28136293  T
Q  201 caaggtcccatgagcgggatgtgtttaaatcccaagtgggctatataaatggcagtagtgctgcttatagtgccttggtcaatcatcatccctgtccatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28136294 caaggtcccatgagcgggatgtgtttaaatcccaagtgggctatataaatggcagtagtgctgcttatagtgccttggtcaatcatcatccctgtccatt 28136393  T
Q  301 cttaattttaataacagtgaactactttttagttctgtgatgct 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28136394 cttaattttaataacagtgaactactttttagttctgtgatgct 28136437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 28136030 - 28136160
Alignment:
Q  209 catgagcgggatgtgtttaaatcccaagtgggctatataaatggcagtagtgctgcttatagtgccttggtcaatcatcatccctgtccattcttaattt 308  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  28136030 catgagcgggatgtgttaaaatcccaagttggctatatagatggcaatagtgctgcttatagtgccttggccaatcatcatccttgttcattcttaattt 28136129  T
Q  309 taataacagtgaactactttttagttctgtg 339  Q
    |||||||||||||||||| ||||||| ||||    
T  28136130 taataacagtgaactactgtttagttgtgtg 28136160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 22696415 - 22696349
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||| |||||    
T  22696415 cccaccgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaagatccca 22696349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 28647065 - 28646998
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||||||| ||||||||||||| |||||    
T  28647065 gcccaccgaaattggcaccagagggaatcgaacctgagaccttgagagaagcacactccaagatccca 28646998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 48125137 - 48125218
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||  ||||||||||||||||||| |||| |||  ||| |||||||||  |||||||||||||||||||||||    
T  48125137 aagaagccaaactagcccaccgaaattggcaccggggaaaattgaacctgagaccttcggaggagcacactccaaggtccca 48125218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 25956271 - 25956336
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| |||| |||||||||||||  ||| | ||||||||||||||||||||||||||||||||    
T  25956271 ccaccgacattgacaccagggagaattgaacctaagaccttgagaggagcacactccaaggtccca 25956336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 5579211 - 5579278
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||| ||||||||||| |||||| || ||| ||||||||||| |||||||||||||||||||||||    
T  5579211 cccacccaaattggcaccggggagagtcaaacctgagaccttgaggaggagcacactccaaggtccca 5579278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 26459394 - 26459454
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||| ||||||||||| |||||||||||||| ||||||||    
T  26459394 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 26459454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 29385719 - 29385787
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||||  ||||||| ||| ||||||||||| |||||||||||||||| ||||||    
T  29385719 gcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtccca 29385787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 38374575 - 38374643
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| ||||||||| ||| | ||||||||| ||||||||||||| |||||||||    
T  38374575 gcccacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtccca 38374643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 2751367 - 2751300
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  2751367 gcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatccca 2751300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 7262307 - 7262252
Alignment:
Q  149 cgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||| || |||||||| |||||||||||||||||||| |||||| ||||    
T  7262307 cgaaattggcatcatggagaatcaaacttgagaccttgagaggatcacactacaag 7262252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 15137653 - 15137594
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactcc 201  Q
    ||||||| |||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  15137653 gcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcc 15137594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 22299945 - 22299878
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||||||||||||   |||||||| |||||||| |||||    
T  22299945 gcccaccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatccca 22299878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 47541478 - 47541419
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||| |||||  ||||||| ||||| | ||||||||||||||||||||||||    
T  47541478 ccaccgaaattgacaccaaagagaatcaaacttaaaaccttgagaggagcacactccaag 47541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 31835284 - 31835230
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaag 204  Q
    |||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||    
T  31835284 aaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaag 31835230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 21050148 - 21050181
Alignment:
Q  174 acttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||||||||||||||||||||||||    
T  21050148 acttgagaccttgagaggagcacactccaaggtc 21050181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 23330844 - 23330901
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactc 200  Q
    ||||||||||||||||||| | | || || ||| ||||||||||||||||||||||||    
T  23330844 gcccaccgaaattggcaccggagggagtcgaacctgagaccttgagaggagcacactc 23330901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 46279109 - 46279048
Alignment:
Q  147 accgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtcc 208  Q
    ||||||||||| |   ||||||||| |||  |||||||||||||||||||||||||||||||    
T  46279109 accgaaattgggaatggggagaatcaaaccggagaccttgagaggagcacactccaaggtcc 46279048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 2883050 - 2882986
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggt 206  Q
    ||||||| |||||| |||||| ||||||  ||| ||||||||||| |||||||||||||||||||    
T  2883050 gcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactccaaggt 2882986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 22760955 - 22760895
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||| | ||||||||| ||| ||||||||||| |||||||||||||| ||||||||    
T  22760955 aaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 22760895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 23552210 - 23552150
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||||||  || ||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  23552210 aaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtccca 23552150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 23637007 - 23637059
Alignment:
Q  158 caccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| |||||||  ||| || |||||||||||||||||||||||||||||||    
T  23637007 caccacggagaattgaacgtgcgaccttgagaggagcacactccaaggtccca 23637059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 203
Target Start/End: Original strand, 674557 - 674592
Alignment:
Q  168 aatctaacttgagaccttgagaggagcacactccaa 203  Q
    |||| |||||||||||||||||||||||||||||||    
T  674557 aatcgaacttgagaccttgagaggagcacactccaa 674592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 7175967 - 7176034
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  7175967 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 7176034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 7275373 - 7275306
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  7275373 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 7275306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 11997941 - 11997878
Alignment:
Q  147 accgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||| | ||||| ||| ||||||||  ||||||||| |||||||| |||||    
T  11997941 accgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatccca 11997878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 12211646 - 12211701
Alignment:
Q  149 cgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||||| |  |||| ||| ||||| ||||||||||||||||||||||    
T  12211646 cgaaattggcaccagaggaaatcaaacctgagatcttgagaggagcacactccaag 12211701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 17212149 - 17212082
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||  ||| ||||||||   |||||||| |||||||| |||||    
T  17212149 gcccaccgaaattggcaccagagagaattgaacctgagacctctggaggagcaaactccaagatccca 17212082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 22119984 - 22119917
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  22119984 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 22119917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 37162334 - 37162385
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactcc 201  Q
    ||||||||||||| ||||||| |||||||||||||||| || ||||||||||    
T  37162334 aaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactcc 37162385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 40543015 - 40543082
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  40543015 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 40543082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 42712058 - 42711999
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactcc 201  Q
    ||||||| |||||| ||| |||||||||| ||| ||||||||||| ||||||||||||||    
T  42712058 gcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcc 42711999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 4566412 - 4566470
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtcc 208  Q
    ||||||||||||| ||||||| ||| |||||||||||| ||||  ||||||||||||||    
T  4566412 aaattggcaccagagagaatcaaacctgagaccttgagaaggaatacactccaaggtcc 4566470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 17197058 - 17197116
Alignment:
Q  146 caccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||||||||| | ||||| ||||||||||||   |||||||| ||||||||    
T  17197058 caccgaaattggcaccagagggaatcgaacttgagacctatggaggagcaaactccaag 17197116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 21558227 - 21558173
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcaca 197  Q
    |||||| ||||||||||||| ||||||| ||| ||||||||||| ||||||||||    
T  21558227 cccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 28135996 - 28136042
Alignment:
Q  72 caattgaccgatcttacaaatttctagtcct-ggcacgagcgggatg 117  Q
    |||||| |||||||||||||||||||||||| |||| ||||||||||    
T  28135996 caattgtccgatcttacaaatttctagtcctaggcatgagcgggatg 28136042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 29538546 - 29538584
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgaga 189  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  29538546 aaattggcatcagggagaatcgaacttgagaccttgaga 29538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 48039627 - 48039685
Alignment:
Q  147 accgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaag 204  Q
    ||||||||||||||||||||||||  ||| |||||||||| | ||||||| ||||||||    
T  48039627 accgaaattggcaccagggagaatagaacctgagaccttgcgaaggagcatactccaag 48039685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 18847407 - 18847456
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgagaggagcacactc 200  Q
    ||||||||||| | ||||| | ||||||||| ||||||||||||||||||    
T  18847407 aaattggcaccggagagaaacgaacttgagatcttgagaggagcacactc 18847456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 21035176 - 21035209
Alignment:
Q  174 acttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||| ||||||||||||||||||||||||||    
T  21035176 acttgagtccttgagaggagcacactccaaggtc 21035209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 21574207 - 21574268
Alignment:
Q  143 gcccaccgaaattggcaccag-ggagaatctaacttgagaccttgagaggagcacactccaa 203  Q
    |||||||||| |||||||||  || ||||| ||| || ||||||||||||||||||||||||    
T  21574207 gcccaccgaagttggcaccaaaggggaatcgaacctgtgaccttgagaggagcacactccaa 21574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 654809 - 654861
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagca 195  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  ||||||||    
T  654809 gcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagca 654861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 5273566 - 5273634
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| | || |||| ||| | |||||||||| |||||||||||| |||||||||    
T  5273566 gcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtccca 5273634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 7721461 - 7721401
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||| |||||| ||||||| ||| ||||||||||| |||||| ||||||| ||||||||    
T  7721461 aaattgacaccagagagaatcgaacatgagaccttgaggaggagtacactcccaggtccca 7721401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 43215276 - 43215216
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    |||||||||  || ||||||| ||| |||||||||||| ||||||||||||| ||||||||    
T  43215276 aaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtccca 43215216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 44628183 - 44628227
Alignment:
Q  167 gaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||    
T  44628183 gaatcaaacttgagactttgaggaggagcacactccaaggtccca 44628227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 6127949 - 6128030
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||  ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  6127949 aagaagccaaactagcccaccaaaattggcaccggggagaatcgaacttgagaccttgagaggagcacgctccaaggtccca 6128030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 39964604 - 39964540
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||||||    
T  39964604 gcccaccgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaaggtc 39964540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 39714755 - 39714822
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||||| |||||    
T  39714755 gcccaccgaaatcggcaccgaggagaatcaaacttgagaccttgagaggagcacactccaagatccca 39714822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 44486135 - 44486197
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggt 206  Q
    |||||||||||||||||| ||||||||  || |||||||||||||||||||||||||||||||    
T  44486135 cccaccgaaattggcaccggggagaattgaatttgagaccttgagaggagcacactccaaggt 44486197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 31605824 - 31605892
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  31605824 gcccacccaaattggcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtccca 31605892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 37047084 - 37047017
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| ||||| | ||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  37047084 gcccaccaaaatttgtaccagggggaatcaaacctgagaccttgagaggagcacactccaaggtccca 37047017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 38939315 - 38939234
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||  |||||||||||||| ||   ||||||||| |||  |||||||||||||||||||||||||||||||||    
T  38939315 aagaagccaaactagcccaccgaaattgacattggggagaatcaaaccagagaccttgagaggagcacactccaaggtccca 38939234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 15581118 - 15581185
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||  ||||| ||||||||  ||| ||||||||| ||||||||||||||||||||||||    
T  15581118 gcccaccgaaatcagcaccggggagaattgaacctgagacctttagaggagcacactccaaggtccca 15581185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 34228973 - 34228906
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| | ||||||| ||| |||||||||||||||| |||||||| ||||||||    
T  34228973 gcccaccaaaattggcaccggagagaatccaacctgagaccttgagaggaacacactccgaggtccca 34228906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 39012390 - 39012323
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||  || ||||| ||| | ||||||||||| ||||||||||||||||||||    
T  39012390 gcccaccgaaattggcaccgaggggaatcaaacctaagaccttgagaagagcacactccaaggtccca 39012323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 4825069 - 4825003
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||| ||||| |||||| |||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  4825069 ccacccaaattagcaccacggagaatcaaacctgagaccttgaagaggagcacactccaaggtccca 4825003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 24217069 - 24217003
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||  |  |||| ||| |||||||||||||||||||||||||||| |||||    
T  24217069 cccaccgaaattggcaccaaaggtaatcgaacctgagaccttgagaggagcacactccaagatccca 24217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 17297085 - 17297016
Alignment:
Q  143 gcccaccgaaattggcaccaggg-agaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| ||| |||||| ||| |||||||||||| ||||||||||||||||||||||    
T  17297085 gcccacccaaattggcaccgggggagaatcaaacatgagaccttgaggaggagcacactccaaggtccca 17297016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 36428812 - 36428748
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggt 206  Q
    ||||||| ||||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||||||    
T  36428812 gcccacccaaattggcaccggggagaatcaaacatgagaccttgaggaggagcatactccaaggt 36428748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 41470587 - 41470651
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||| |||||||||||   || ||||| ||||||||||||||||||||||| |||||||||||    
T  41470587 gcccactgaaattggcactgtggggaatcgaacttgagaccttgagaggagcatactccaaggtc 41470651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 43446055 - 43445995
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||| ||||    
T  43446055 aaattggcaccggggagaatcgaacatgagaccttgaggaggagcacactccaaggaccca 43445995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 44417446 - 44417505
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||| ||| ||||| ||| |||||||||||||| |||||||||||||||||||    
T  44417446 gaaattggcaccgggg-gaatcaaacctgagaccttgagagcagcacactccaaggtccca 44417505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 49101746 - 49101809
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||||||| |||||||||||| ||||| ||  | |||||||||||||||||||||||||||||    
T  49101746 gcccaccgaa-ttggcaccagggggaatcaaatgtaagaccttgagaggagcacactccaaggtc 49101809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 1138669 - 1138610
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||||||| || |||| || ||| | ||||||||||||||||||||||||||    
T  1138669 ccaccgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaag 1138610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 8077739 - 8077672
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||   |||||||| |||||||| |||||    
T  8077739 gcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatccca 8077672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 25237094 - 25237161
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||| || | ||||| ||| |||||||||||||| |||| |||||||| |||||    
T  25237094 gcccaccgaaattggcactagagggaatcgaacctgagaccttgagagaagcaaactccaagatccca 25237161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 45859148 - 45859215
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||  ||||||||| |||||||| |||||    
T  45859148 gcccaccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatccca 45859215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 46607902 - 46607835
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  46607902 gcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatccca 46607835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 8904506 - 8904456
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactc 200  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  8904506 aaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 3334868 - 3334811
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactc 200  Q
    |||||||||||| || ||| || |||||| ||||||||||||||||| ||||||||||    
T  3334868 gcccaccgaaatcggaaccgggaagaatcgaacttgagaccttgagaagagcacactc 3334811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 15059507 - 15059568
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||   |||||||| ||||||||    
T  15059507 gcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaag 15059568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 52289788 - 52289735
Alignment:
Q  154 ttggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||||||||||||||| || |||||| ||| |||||||| ||||||||||||    
T  52289788 ttggcaccagggagaatcaaatttgagaacttaagaggagcgcactccaaggtc 52289735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 9500460 - 9500527
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagacct-tgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||| |||||||| ||| ||||||| |||||||| |||||    
T  9500460 gcccaccgaaattggcaccagagagaatcgaacctgagacctctga-aggagcaaactccaagatccca 9500527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 20487297 - 20487361
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccc 209  Q
    ||||||||||||||||||| | ||||| ||||||||||||   |||||||| |||||||| ||||    
T  20487297 ccaccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatccc 20487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 22585185 - 22585245
Alignment:
Q  146 caccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggt 206  Q
    ||||||||||| || |||| |||||| ||||| |||| |||||||||| ||||||||||||    
T  22585185 caccgaaattgacatcaggaagaatcaaacttaagacattgagaggagtacactccaaggt 22585245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 40802180 - 40802232
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaa 203  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||||| |||||||    
T  40802180 aaattggcaccatggagaatcaaacatgagaccttgagatgagcaaactccaa 40802232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 2799954 - 2799903
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactcc 201  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||    
T  2799954 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcc 2799903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 4621342 - 4621409
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  4621342 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 4621409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 16539700 - 16539633
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||||| | ||||| ||| ||||||||||  |||||| ||||||||| |||||    
T  16539700 gcccaccaaaattggcaccagagggaatcaaacctgagaccttgcaaggagctcactccaagatccca 16539633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 19480618 - 19480559
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||  || ||||| ||  |||||||||||||||||||||||||||| |||||    
T  19480618 aaattggcaccgcggggaatcgaatgtgagaccttgagaggagcacactccaagatccca 19480559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 24674485 - 24674418
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  24674485 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 24674418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 26608266 - 26608219
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcaca 197  Q
    ||||||| || ||||||||||| ||| |||||||||||||||||||||    
T  26608266 gaaattgacatcagggagaatcaaacatgagaccttgagaggagcaca 26608219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 30677268 - 30677201
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  |||||||| ||||| || |||||    
T  30677268 gcccaccgaaattggcaccagagggaatcaaacctgagacctttggaggagcaaactcctagatccca 30677201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 32729637 - 32729570
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||  | ||||| ||| |||||| |||||||||||| |||| ||| |||||    
T  32729637 gcccaccgaaattggcaccatagggaatcgaacctgagactttgagaggagcaaactcgaagatccca 32729570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 33700757 - 33700808
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactcc 201  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||    
T  33700757 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcc 33700808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 24857808 - 24857873
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccc 209  Q
    |||||||||| || |||||||| |||||| ||| ||||| |||||||| ||| ||||||||||||||    
T  24857808 gcccaccgaa-ttcgcaccaggtagaatcaaacctgagagcttgagagaagcccactccaaggtccc 24857873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 51814594 - 51814536
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactc 200  Q
    ||||||| ||||||||||| | ||||||| ||| ||||||||||| |||||||||||||    
T  51814594 gcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactc 51814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 7946936 - 7946895
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagacct 184  Q
    ||||||||||||||||||||| | ||||| ||||||||||||    
T  7946936 gcccaccgaaattggcaccagagggaatcgaacttgagacct 7946895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 17447358 - 17447305
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||| ||||||| |||  |||||||| |||| |||||||||||||    
T  17447358 aaattggcaccagagagaatcaaaccagagaccttcagagaagcacactccaag 17447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 18646945 - 18646904
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagacct 184  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||    
T  18646945 gcccaccgaaattggcaccagagagaatcgaacctgagacct 18646904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 45266926 - 45266873
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaa 203  Q
    ||||||||||| ||||||||| ||| ||||||||||| |||||||| |||||||    
T  45266926 aaattggcaccggggagaatcgaacctgagaccttgaggaggagcaaactccaa 45266873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 47360524 - 47360557
Alignment:
Q  177 tgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| ||||||||||||||||||||||||||||    
T  47360524 tgagatcttgagaggagcacactccaaggtccca 47360557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 48400269 - 48400204
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| ||||||||||| | |||||||  || |||||||||||||||||  | |||||||||||||    
T  48400269 ccacctaaattggcaccggagagaatcgcacctgagaccttgagaggagtgcgctccaaggtccca 48400204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 2537790 - 2537738
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagca 195  Q
    ||||||||||||||||||||    ||||| ||| |||||||||||||||||||    
T  2537790 gcccaccgaaattggcaccaaatggaatcaaacctgagaccttgagaggagca 2537738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 8177166 - 8177226
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||| ||| ||||||| |||||||||||||| || |||||    
T  8177166 aaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatccca 8177226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 9165179 - 9165239
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||  ||| |||||| ||||| ||||||||||||| ||||||||    
T  9165179 aaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtccca 9165239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 9926288 - 9926320
Alignment:
Q  178 gagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||||||||| |||||    
T  9926288 gagaccttgagaggagcacactccaagatccca 9926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 19940856 - 19940916
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||| | ||||||| ||| ||||||||| | |||||||||||||||||| ||||    
T  19940856 aaattggcaccggagagaatcaaacctgagaccttaaggaggagcacactccaaggaccca 19940916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 20907367 - 20907423
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactc 200  Q
    ||||| |||||||||||||  | ||||  ||| ||||||||||||||||||||||||    
T  20907367 cccactgaaattggcaccaaagtgaattgaacgtgagaccttgagaggagcacactc 20907423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 25496596 - 25496660
Alignment:
Q  146 caccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||| ||||| || | ||||| ||||||||||||| |||||||||  ||||||| |||||    
T  25496596 caccgaaataggcactagagggaatcgaacttgagaccttaagaggagcaatctccaagatccca 25496660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 39966190 - 39966126
Alignment:
Q  146 caccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccc 209  Q
    |||| ||||| ||||| ||||||| | ||| ||||||||||| |||||| |||||||||||||||    
T  39966190 cacccaaattagcaccggggagaaacgaacctgagaccttgaggaggagtacactccaaggtccc 39966126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 40810559 - 40810499
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttg-agaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||| |||||||||| |||||| |||||||| || |||||    
T  40810559 aaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactcccagatccca 40810499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 40136940 - 40137006
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  40136940 gcccaccgaaattggcacc-gggagaatcaaacctgagaccttgagaggagcacactccaaggtccca 40137006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 6530904 - 6530839
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||| ||||||||| ||| |||||| |||||||||||||||||| ||||||||    
T  6530904 ccaccgatattggcaccggggagaatcgaacctgagacattgagaggagcacactcctaggtccca 6530839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 21239445 - 21239384
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||| |||| |||||||||||    
T  21239445 gcccaccgaaattggcaccagggaaaatcaaacttgaaaccttgaaaggaacacactccaag 21239384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 34778834 - 34778770
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||||||||||||||||  ||| |||| ||||||||||||||| ||||||||||| |||||||    
T  34778834 gcccaccgaaattggcaccgtggaaaatcaaacttgagaccttgaaaggagcacactgcaaggtc 34778770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 15975000 - 15974934
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||| |||| |||| ||||| ||||||||||||||||||||||| |||||||| |||||    
T  15975000 gcccaccgaaatttgcactaggg-gaatcgaacttgagaccttgagaggagcatactccaagatccca 15974934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 16317710 - 16317643
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||| |||||||||||||| ||||||| ||| ||||||  |||||||||||||||| |||||||||    
T  16317710 gcccactgaaattggcaccagagagaatcgaacatgagacgctgagaggagcacactctaaggtccca 16317643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 18897265 - 18897198
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||| |||||||||||||| |||||| ||| ||||||||||| ||||||||||||| |||||||||    
T  18897265 cccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactctaaggtccca 18897198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 26168953 - 26169020
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||| ||||  ||||| ||| ||||||||||||||||||| |||||||| |||||    
T  26168953 gcccaccgaaattggcatcaggaggaatcaaacctgagaccttgagaggagcaaactccaagatccca 26169020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 41070857 - 41070790
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||| |||||  | ||||| |||||||||||||||||| ||||||||||||| |||||    
T  41070857 gcccaccgaaattgacaccaaagggaatcgaacttgagaccttgagagtagcacactccaagatccca 41070790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 22268911 - 22268977
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||| |||| |||||| | || |||| ||||||||||||||||| ||||||||||||||||||||    
T  22268911 cccacctaaatgggcaccggagaaaatcaaacttgagaccttgagaagagcacactccaaggtccca 22268977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 11793497 - 11793565
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| || |||||| ||| | |||||||||| ||||||||||||||||||||||    
T  11793497 gcccacccaaattggcaccgggaagaatcaaacctaagaccttgaggaggagcacactccaaggtccca 11793565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 18128610 - 18128542
Alignment:
Q  142 cgcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||||| ||||||| ||  | ||||||||| ||||||||||| |||| |||||    
T  18128610 cgcccaccgaaattggcaccagagagaatcgaatctaagaccttgaaaggagcacacttcaagatccca 18128542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 3734728 - 3734795
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  3734728 gcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatccca 3734795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 6536619 - 6536552
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||| ||||||||||||| ||||||  ||| ||||||||||| |||||||||||||| ||||||||    
T  6536619 cccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtccca 6536552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 9126584 - 9126627
Alignment:
Q  167 gaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  9126584 gaatcgaacttgagtccttgagaggagcacactccaaggtccca 9126627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 34639313 - 34639378
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||| | || || | | |||||||||||||||||||||||||||| |||||    
T  34639313 cccaccgaaattggcaccagaggga-tcgagcctgagaccttgagaggagcacactccaagatccca 34639378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 28783160 - 28783095
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtc 207  Q
    ||||||| |||||||||||  |||||||| ||| ||||||||||| |||||||||||||| |||||    
T  28783160 gcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtc 28783095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 34694681 - 34694742
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||||||||||||   ||||| ||| | ||||||||||||||||| ||||||||    
T  34694681 gcccaccgaaattggcaccagatggaatcgaacctaagaccttgagaggagcaaactccaag 34694742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 2203592 - 2203524
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| ||||||||  | | ||||||||||| |||||||||||||| ||||||||    
T  2203592 gcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtccca 2203524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 5438450 - 5438482
Alignment:
Q  178 gagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||||||||||||||||    
T  5438450 gagaccttgagaggagcacactccaaggtccca 5438482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 16852440 - 16852372
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| |||||||||| | |||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  16852440 gcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtccca 16852372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 14633050 - 14632983
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  14633050 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 14632983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 27746440 - 27746507
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||  | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  27746440 gcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatccca 27746507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 28787473 - 28787540
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||| ||||||||||  ||||||||| ||| ||||||||||| ||||||||||||  |||||||||    
T  28787473 cccacctaaattggcactggggagaatcaaacctgagaccttgaggaggagcacacttgaaggtccca 28787540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 34237760 - 34237827
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  34237760 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 34237827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 39349352 - 39349285
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  39349352 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 39349285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 28193569 - 28193503
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  28193569 cccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 28193503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 29695334 - 29695368
Alignment:
Q  173 aacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||||||||||||| |||||||||||    
T  29695334 aacttgagaccttgagaggagcatactccaaggtc 29695368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 3403607 - 3403668
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||||||||||||   ||||| ||| | ||||||||||| ||||| ||||||||    
T  3403607 gcccaccgaaattggcaccagatggaatcgaacataagaccttgagatgagcaaactccaag 3403668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 3794887 - 3794826
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||| |||||||||||||||| | ||| | ||| ||||||||||||||||||| ||| ||||    
T  3794887 gcccgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaag 3794826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 22779720 - 22779687
Alignment:
Q  177 tgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||||||||    
T  22779720 tgagaccttgagaggagcacattccaaggtccca 22779687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 33017306 - 33017257
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacact 199  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||||||||||||    
T  33017306 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacact 33017257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 968462 - 968394
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| ||||||||| | | ||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  968462 gcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtccca 968394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 1458437 - 1458405
Alignment:
Q  178 gagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||| ||||||||||||||    
T  1458437 gagaccttgagaggagcatactccaaggtccca 1458405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 2428144 - 2428112
Alignment:
Q  178 gagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||| ||||||||||||||    
T  2428144 gagaccttgagaggagcatactccaaggtccca 2428112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 3305164 - 3305232
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||||| || |||| || |||||||||||| ||||||||| |||| || |||||    
T  3305164 gcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatccca 3305232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 4718741 - 4718674
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagacct-tgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||| ||| ||||||| |||||||| |||||    
T  4718741 gcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatccca 4718674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 13122597 - 13122565
Alignment:
Q  176 ttgagaccttgagaggagcacactccaaggtcc 208  Q
    ||||||| |||||||||||||||||||||||||    
T  13122597 ttgagacattgagaggagcacactccaaggtcc 13122565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 18540390 - 18540330
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||| || ||||||| ||||||||    
T  18540390 aaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtccca 18540330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 19703463 - 19703531
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||||  ||||| ||| |||||||||| ||| ||||||||||| |||||||||||||  ||||||||    
T  19703463 gcccaccttaattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtccca 19703531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 26688965 - 26688897
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| |||||| ||| ||| ||||   ||| |||||||||||| ||||||||||||||||||||||    
T  26688965 gcccacccaaattgacactaggaagaactgaacctgagaccttgaggaggagcacactccaaggtccca 26688897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 36034497 - 36034541
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga 187  Q
    ||||||| |||||| |||||| ||||||| |||||||||||||||    
T  36034497 gcccacctaaattgacaccagagagaatcaaacttgagaccttga 36034541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 6099481 - 6099562
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||  ||||||||| ||||||| | ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  6099481 aagaagccaaactagcccaccgatattggcagcggggagaatcgaacctgagaccttgagaggagcacactccaaggtccca 6099562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 18825436 - 18825373
Alignment:
Q  147 accgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  18825436 accgaaattggcaccggggaaaatcaaacttgagaccttgagaggagcacactcctaggtccca 18825373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 26176304 - 26176369
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| ||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||    
T  26176304 ccaccaaaattggcaccagggagaatcgaatctgagaccttgagaggagcacaccccaaggtccca 26176369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 7250328 - 7250261
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||| || ||  ||||| ||||||||| ||||||||||||||||||||||||||||    
T  7250328 gcccaccgaaattggctccgggaggaatcaaacttgagatcttgagaggagcacactccaaggtccca 7250261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 8192456 - 8192523
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||| ||||||||||| | ||||| ||| |||||||||||||||||||||||||||| |||||    
T  8192456 gcccaccgacattggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatccca 8192523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 28194238 - 28194305
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||| | ||||||| |||||||||||||||||| |||||    
T  28194238 gcccaccgaaattggcaccagagagaatcgaacctaagaccttaagaggagcacactccaagatccca 28194305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 16525275 - 16525210
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||  ||||||||||| ||||||    
T  16525275 ccaccgaaattggcaccggggagaatcgaacctgagaccttgagagtcgcacactccaacgtccca 16525210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 41908614 - 41908679
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtc 207  Q
    ||||||| ||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||    
T  41908614 gcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactccaaggtc 41908679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 12517738 - 12517797
Alignment:
Q  152 aattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||    
T  12517738 aattggcaccagggagaatcaaacatgagaccttgaggaggagcaaactccaaggtccca 12517797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 26482192 - 26482125
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||| |||||||||||   |||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  26482192 gcccactgaaattggcactgaggagaatcgaacctgagaccttgagaggagcacactcctaggtccca 26482125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 3697381 - 3697443
Alignment:
Q  148 ccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||  |||||||| |||  ||||||||||||||||||| |||||||||||||    
T  3697381 ccgaaattggcaccgaggagaatcgaaccagagaccttgagaggagcactctccaaggtccca 3697443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 30943188 - 30943134
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcaca 197  Q
    |||||||||||||||||  || ||||||| |||||||||||||||||||||||||    
T  30943188 gcccaccgaaattggcataagagagaatcaaacttgagaccttgagaggagcaca 30943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 43963983 - 43964032
Alignment:
Q  161 cagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  43963983 cagggggaatcaaacatgagaccttgagaggagcacactccaaggtccca 43964032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 342493 - 342430
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||||||||  |||||||  |||||||||||||| || ||| |||||||||||||    
T  342493 cccaccgaaattggcaccgaggagaattgaacttgagaccttgcgatgagtacactccaaggtc 342430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 13747610 - 13747677
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||| |||||| ||| || || ||| |||||||||| |||||||| ||||||||||||||    
T  13747610 gcccaccgaaatcggcaccggggggattcaaacctgagaccttgggaggagcatactccaaggtccca 13747677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 27967126 - 27967189
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||| |||||| |||| ||||||||||||  |||||||||||| |||||||| |||||||||    
T  27967126 cccaccaaaattgccaccggggagaatctaaactgagaccttgaggggagcacaatccaaggtc 27967189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 28105620 - 28105539
Alignment:
Q  131 aagaagccaaacg--cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||  |||||| |||||| || ||| ||||||||||  ||||||||||||| ||| ||| ||||||||||||    
T  28105620 aagaagccaaacgaacccaccaaaattgccatcagagagaatctaatctgagaccttgagaagagtacaatccaaggtccca 28105539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 4618790 - 4618851
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||| ||||||||||||||||||  |||| ||| ||| ||||||||||||||| ||||||||    
T  4618790 gcccgccgaaattggcaccaggggaaatcgaacctgaaaccttgagaggagcatactccaag 4618851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 30359753 - 30359686
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||  ||||||||| || | ||||||||||| ||||||||||||||||||||||    
T  30359753 gcccacccaaattggcactggggagaatcgaaat-gagaccttgaggaggagcacactccaaggtccca 30359686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 37480175 - 37480107
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||| ||| ||||||||| ||| ||||||||||| |||||||||||||  ||||||||    
T  37480175 gcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtccca 37480107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 42327371 - 42327439
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| |||||||||||   ||||||| ||| ||||||||||| |||||||||||||| ||||||||    
T  42327371 gcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 42327439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 42602654 - 42602586
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| | ||||||| ||| | |||||||||| ||||||||||||| ||||||||    
T  42602654 gcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtccca 42602586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 10582095 - 10582162
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  10582095 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 10582162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 19016123 - 19016072
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactcc 201  Q
    ||||||||||| ||||||||| |||||||||||| || ||||||||||||||    
T  19016123 aaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcc 19016072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 19605950 - 19606017
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||| |||  || | ||||| ||| |||||||||||||||||| ||||||||| |||||    
T  19605950 gcccaccgaaattagcattagagggaatcgaacctgagaccttgagaggagcgcactccaagatccca 19606017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 25293258 - 25293191
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  25293258 gcccaccgaaattggcaccagagggaatcgaacctgagacctctcgaggagcaaactccaagatccca 25293191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 29698239 - 29698172
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||| |||||| |  |||  ||||||||||||||||||||||| | |||||| |||||    
T  29698239 gcccaccgaaattgacaccagaggaaataaaacttgagaccttgagaggagcaaattccaagatccca 29698172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 32106680 - 32106598
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagagg-agcacactccaaggtccca 210  Q
    ||||||||||||  |||||| |||||||||||| | ||||||| | |   ||||||||||||| |||||||||||||||||||    
T  32106680 aagaagccaaactagcccactgaaattggcaccggagagaatcgagcccaagaccttgagagggagcacactccaaggtccca 32106598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 45026835 - 45026784
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactcc 201  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||    
T  45026835 aaattggcaccagagagaatcaaacatgagaccttgaggaggagcacactcc 45026784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 15038051 - 15037985
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccc 209  Q
    ||||||||||||||||||||  | ||||| ||| |||||||||  |||||||| |||||||| ||||    
T  15038051 gcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatccc 15037985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 25384634 - 25384568
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||| |||||||||||  | | |||| |||  |||||| ||||||||||||||||||||||||||    
T  25384634 cccaccaaaattggcaccgagcataatcgaacccgagaccctgagaggagcacactccaaggtccca 25384568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 17324858 - 17324797
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| ||||||||    
T  17324858 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaag 17324797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 40591275 - 40591214
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||||| ||||||    |||| ||| |||||| |||||||||||||||||||||    
T  40591275 gcccaccgaaattgccaccagaagaaatcaaacctgagactttgagaggagcacactccaag 40591214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 19244201 - 19244141
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagacctt-gagaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||| ||||||||| | |||||||||||||  ||||||||    
T  19244201 aaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtccca 19244141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 19322860 - 19322800
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||||||| || ||||||| |||  |||||||||| |||||||||||||| ||||||||    
T  19322860 aaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtccca 19322800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 21213869 - 21213801
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| ||||||||| ||| ||||||||  | ||||| |||||||| ||||||||    
T  21213869 gcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtccca 21213801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 23052499 - 23052567
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||| |||||| |||||||||| ||| ||||||||||| ||| |||||||||| | ||||||    
T  23052499 gcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtccca 23052567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 29503351 - 29503303
Alignment:
Q  163 gggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||||||||    
T  29503351 gggagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 29503303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 30410533 - 30410593
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||||||||| || |||| ||| |||| ||||||| ||||||||||||| ||||||||    
T  30410533 aaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtccca 30410593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 30466935 - 30466995
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaa 203  Q
    ||||||||||||||||| ||| ||||||| ||| ||||||||  |||||| || |||||||    
T  30466935 gcccaccgaaattggcagcagagagaatcgaacctgagacctctagaggaacaaactccaa 30466995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 43374430 - 43374497
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagacct-tgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||| ||| ||||||| |||||||| |||||    
T  43374430 gcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatccca 43374497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 40777112 - 40777043
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtcccatg 212  Q
    |||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  40777112 gcccaccgaaattggcactagagagaatcaaacctgagaccttgagaggagcacactccaatgtcccatg 40777043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 11092147 - 11092213
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||| |||||||| ||||||||||    
T  11092147 cccaccgaaattagcaccagggagaatcgaagttgagaccttgagagtagcacactacaaggtccca 11092213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 15034441 - 15034377
Alignment:
Q  146 caccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||| ||| |||||||||||||    
T  15034441 caccgaaattggcaccagggagaattgaacctgagaccttgagaggatcaccctccaaggtccca 15034377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 4252508 - 4252562
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  4252508 gaaattggcaccagagggaatcaaacttgagaccttgagaggagcacactccaag 4252562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 40268587 - 40268521
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||| | ||||||||| ||| ||||||||| |||||||| |||||||||||||||    
T  40268587 cccaccgaaattggcatcggggagaatcgaacctgagaccttaagaggagcccactccaaggtccca 40268521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 53863845 - 53863911
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||| ||||||||||||||| ||||||  ||| | ||||||||||||||||||||||||||||||||    
T  53863845 cccaacgaaattggcaccagagagaattgaacctaagaccttgagaggagcacactccaaggtccca 53863911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 39041957 - 39042024
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||||||||||||   |||||||| |||||||| |||||    
T  39041957 gcccaccgaaattggcaccagagagaatcgaacttgagacctctggaggagcaaactccaagatccca 39042024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 43303871 - 43303793
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||  ||||||||| ||| ||||| ||||||||| ||| |||||||| ||||||||||| ||||||||||    
T  43303871 aagaagccaaactagcccaccgatattagcaccggggagaatcaaacctgagacctggagaggagcacgctccaaggtc 43303793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 31714415 - 31714349
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||| |||    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  31714415 cccaccgaaattgacactgatgagaatcgaacttgagaccttgagaggagcacacttcaaggtccca 31714349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 18316477 - 18316542
Alignment:
Q  146 caccgaaattggcac-cagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||| ||| || |||||||| ||| | ||||||||||||||||||||||||||||||||    
T  18316477 caccgaaattgacacgcaaggagaatcgaacctaagaccttgagaggagcacactccaaggtccca 18316542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 35623246 - 35623310
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| || |||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  35623246 ccaccaaatttggcacc-gggtgaatcgaacatgagaccttgagaggagcacactccaaggtccca 35623310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 26158909 - 26158849
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||||||||||||||||  | ||||  ||| ||||||||||||||||||||||||||||    
T  26158909 cccaccgaaattggcaccaaagggaatgaaacctgagaccttgagaggagcacactccaag 26158849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 47236947 - 47237015
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttg-agaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| ||||||||| ||| |||||||||| |||||||||||||||  |||||||    
T  47236947 gcccacccaaattggcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtccca 47237015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 42799724 - 42799791
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| ||||||||| | |  ||||| || ||| ||||||||||||||||||||||||||||||||||    
T  42799724 gcccatcgaaattggaatccaggagagtcgaacctgagaccttgagaggagcacactccaaggtccca 42799791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 34844468 - 34844406
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||||||||||| |  | | ||||| ||| |||||||||||||||||||||||||||||||    
T  34844468 ccaccgaaattggctctggagggaatcgaacctgagaccttgagaggagcacactccaaggtc 34844406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 16900677 - 16900725
Alignment:
Q  163 gggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  16900677 gggagaatcgaacatgagaccttgacgaggagcacactccaaggtccca 16900725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 19716297 - 19716229
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| |||||| |||| ||||||||| |||  |||||||||| ||||||||||||||| |||||||    
T  19716297 gcccacccaaattgtcaccggggagaatcgaaccagagaccttgaggaggagcacactccatggtccca 19716229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 28703388 - 28703448
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttg-agaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||| |||||||||| ||||||||||||||| || |||||    
T  28703388 aaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatccca 28703448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 7485630 - 7485697
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||| ||| | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  7485630 gcccaccgaaattggcatcagagggaatcgaacctgagacctttggaggagcaaactccaagatccca 7485697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 26108384 - 26108317
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  26108384 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 26108317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 27093345 - 27093396
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactcc 201  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||    
T  27093345 aaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcc 27093396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 28834947 - 28835013
Alignment:
Q  143 gcccaccgaaattggcaccaggga--gaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||| |||||||||||| ||||  || || ||||||||||||||||||||  |||||||||||||    
T  28834947 gcccactgaaattggcaccggggaaagattcgaacttgagaccttgagaggaagacactccaaggtc 28835013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 30807258 - 30807325
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  30807258 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 30807325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 32151516 - 32151449
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||| || ||||||| || |||| |||||  |||||||| |||||||| |||||    
T  32151516 gcccaccgaaattggcactagagagaatcgaatttgaaacctttggaggagcaaactccaagatccca 32151449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 35493003 - 35492936
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  35493003 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 35492936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 37944775 - 37944841
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| |||||| |||  ||||||||  ||| ||| ||||||||||||||||||||||||||||||    
T  37944775 gcccacccaaattgacacttgggagaattgaacctga-accttgagaggagcacactccaaggtccca 37944841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 42430432 - 42430366
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||| ||||||||||||   ||||||||| ||||  |||||||||||||||||||||||||| |||||    
T  42430432 gccccccgaaattggcattggggagaatcgaacta-agaccttgagaggagcacactccaagatccca 42430366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 50731341 - 50731399
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||| ||||  | ||||| ||||||||||||||||||||||||||| ||||    
T  50731341 ccaccgaaattggtaccaacg-gaatcaaacttgagaccttgagaggagcacacttcaag 50731399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 50781513 - 50781455
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||| ||||  | ||||| ||||||||||||||||||||||||||| ||||    
T  50781513 ccaccgaaattggtaccaacg-gaatcaaacttgagaccttgagaggagcacacttcaag 50781455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 53234015 - 53234082
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||| |||||| |   |||||||| |||||||| |||||    
T  53234015 gcccaccgaaattggcaccagagagaatcgaacctgagacttctggaggagcaaactccaagatccca 53234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 44069858 - 44069796
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaag 204  Q
    ||||||| ||||||||||| |  |||||| ||| ||||||||||| |||||||||||||||||    
T  44069858 gcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactccaag 44069796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 48977479 - 48977413
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||   ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  48977479 cccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatccca 48977413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 10682927 - 10682984
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||||| |||| |||||||  ||| |||||| ||||||| ||||||||||||||||    
T  10682927 gaaattgggaccaaggagaattgaacctgagactttgagagaagcacactccaaggtc 10682984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 40940915 - 40940850
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  40940915 ccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 40940850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 171
Target Start/End: Complemental strand, 1178264 - 1178236
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatc 171  Q
    |||||||||||||||||||||||||||||    
T  1178264 gcccaccgaaattggcaccagggagaatc 1178236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 5664621 - 5664585
Alignment:
Q  161 cagggagaatctaacttgagaccttgagaggagcaca 197  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  5664621 cagggagaatcaaacatgagaccttgagaggagcaca 5664585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 10445123 - 10445183
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||| ||||||| ||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  10445123 aaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtccca 10445183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 14186747 - 14186687
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactcca 202  Q
    ||||||| |||||| |||| | ||||||| ||| ||||||||||| |||||||||||||||    
T  14186747 gcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacactcca 14186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 30311398 - 30311338
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||||  ||||||| ||| ||||||||||| |||||||||||||| || |||||    
T  30311398 aaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatccca 30311338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 36803093 - 36803129
Alignment:
Q  168 aatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||| |||||||||| |||||||||||||||||||||    
T  36803093 aatcgaacttgagactttgagaggagcacactccaag 36803129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 37788449 - 37788505
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggt 206  Q
    |||||||||| || ||||||| ||| ||||||||||| |||||||||||||| ||||    
T  37788449 aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggt 37788505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 40133554 - 40133614
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaa 203  Q
    |||||||||||||| |||||| | ||||| ||| |||||||||  |||||||| |||||||    
T  40133554 gcccaccgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaa 40133614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 52821743 - 52821807
Alignment:
Q  146 caccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  52821743 caccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 52821807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 53167777 - 53167832
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||| |||  |||| |||||||||||||||||| ||||||||||| ||||    
T  53167777 aaattggcaccggggt-aatcaaacttgagaccttgagagaagcacactccatggtc 53167832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 53413037 - 53412981
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggt 206  Q
    ||||||||||||| ||||||  ||| ||||||||||| |||||||||||||| ||||    
T  53413037 aaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggt 53412981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 54990802 - 54990734
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| |||||| || |  |||||||| ||| |||||||||||| |||||||| |||||||||||||    
T  54990802 gcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagcacgctccaaggtccca 54990734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 56410039 - 56409983
Alignment:
Q  154 ttggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  56410039 ttggcaccagggagaatcgaacctgagaccttgagaggagcacactccaaggtccca 56409983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 25414192 - 25414255
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||| ||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  25414192 cccaccaaaattggcaccggggagaatcaaacctgagactttgagaggagcacactccaaggtc 25414255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 37980110 - 37980191
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||  |||| | ||||||| |||  ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  37980110 aagaagccaaactagcccgctgaaattgacactggggagaatcgaacctgagaccttgagaggagcacactccaaggtccca 37980191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 32992704 - 32992644
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32992704 aaattgacaccggggagaatcgaacttgagaccttgaggaggagcacactccaaggtccca 32992644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 46295197 - 46295129
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| ||||||||| ||| ||||||||||| |||||||||||||||| ||||||    
T  46295197 gcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtccca 46295129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 21344916 - 21344849
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| |||||| |||  ||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  21344916 gcccacctaaattgacactggggagaattgaacatgagaccttgagaggagcacactccaaggtccca 21344849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 29195186 - 29195127
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||  || ||||||| |||||| |||||||||||||||||||||||||||||||    
T  29195186 aaattggcattagagagaatcgaacttgcgaccttgagaggagcacactccaaggtccca 29195127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 40058957 - 40059024
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||  ||||||||| |||||||| |||||    
T  40058957 gcccaccgaaattggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatccca 40059024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 7949430 - 7949498
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| |||||| |||||| ||||||| ||| ||||||||||| |||||||||||||| ||||||||    
T  7949430 gcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtccca 7949498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 37109335 - 37109395
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||| ||||||||||| |||||||||||||| ||||||||    
T  37109335 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 37109395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 51622585 - 51622521
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggt 206  Q
    ||||||| ||||||||||||| |||| || ||| ||||||||||| |||||||||||||||||||    
T  51622585 gcccacccaaattggcaccagagagagtcgaacctgagaccttgaggaggagcacactccaaggt 51622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 4686110 - 4686168
Alignment:
Q  148 ccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||||| |||| |||||||||| ||| |||||| ||||||||||||||||||||||||    
T  4686110 ccgaaatttgcac-agggagaatcaaacctgagacattgagaggagcacactccaaggtc 4686168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 25434655 - 25434702
Alignment:
Q  163 gggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  25434655 gggagaatcaaacctgagaccttgagagaagcacactccaaggtccca 25434702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 25852306 - 25852239
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  25852306 gcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatccca 25852239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 37492694 - 37492761
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| ||||| ||||  |||||| || ||| |||||||||||||||| |||||||||||||||||    
T  37492694 gcccaccaaaattagcactcgggagagtcgaacctgagaccttgagaggatcacactccaaggtccca 37492761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 49287950 - 49287883
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||   |||||||| |||||||| |||||    
T  49287950 gcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatccca 49287883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 38206127 - 38206169
Alignment:
Q  168 aatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  38206127 aatcaaacctgagaccttgagaggagcacactccaaggtccca 38206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 4249269 - 4249216
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaa 203  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||    
T  4249269 aaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaa 4249216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 5998698 - 5998731
Alignment:
Q  177 tgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||||||||||||||||    
T  5998698 tgagaccttgagaggagcacactccaaggtccca 5998731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 34844863 - 34844924
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||   |||||||| ||||||||    
T  34844863 gcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaag 34844924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 37455661 - 37455609
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaa 203  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  37455661 gaaattggcaccaggg-gaatcgaacctgagaccttgagaggagcatactccaa 37455609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 41621701 - 41621762
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||| ||||||||||||| |  |||| ||| ||||||||||||||||||| ||||||||    
T  41621701 gcccaccaaaattggcaccagaggaaatcaaacatgagaccttgagaggagcaaactccaag 41621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 23378048 - 23377988
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    |||||||||| || ||||||| ||| ||||||||||| |||||||||||||| ||||||||    
T  23378048 aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 23377988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 42281217 - 42281277
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| |||||| ||| | ||| ||| ||||||||||||||||||||||| ||||||||||    
T  42281217 gaaataggcaccgggggggatcaaacctgagaccttgagaggagcacactacaaggtccca 42281277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 5795386 - 5795449
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggt 206  Q
    |||||| ||||||||||  ||||||||| ||| ||||||||||| |||||||| ||||||||||    
T  5795386 cccacccaaattggcactggggagaatcaaacctgagaccttgaggaggagcatactccaaggt 5795449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 20078089 - 20078156
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  20078089 gcccaccgaaattggcaccagtgggaatcaaacctgagacctctggaggagcaaactccaagatccca 20078156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 25969607 - 25969673
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaac--ttgagaccttgagaggagcacactccaaggtccc 209  Q
    ||||||||||||||||||||| ||||| |||   || |||||||||||||||| |||||||| ||||    
T  25969607 ccaccgaaattggcaccagggggaatccaacctctgggaccttgagaggagcaaactccaagatccc 25969673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 27528900 - 27528967
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  27528900 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 27528967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 27908573 - 27908538
Alignment:
Q  173 aacttgagaccttgagaggagcacactccaaggtcc 208  Q
    |||||||||||||||||||| |||||||||||||||    
T  27908573 aacttgagaccttgagaggaacacactccaaggtcc 27908538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 210
Target Start/End: Original strand, 31141356 - 31141387
Alignment:
Q  179 agaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||||||||||||||    
T  31141356 agaccttgagaggagcacactccaaggtccca 31141387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 33992718 - 33992651
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||| | ||||||   |||||||| |||||||| |||||    
T  33992718 gcccaccgaaattggcaccagagagaatcgaacctaagacctctggaggagcaaactccaagatccca 33992651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 34835621 - 34835554
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||| |||||| | ||||| ||| ||||||||| ||||||||| |||| ||| |||||    
T  34835621 gcccaccgaaattgacaccagagggaatcgaacatgagaccttaagaggagcaaactctaagatccca 34835554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 40252368 - 40252329
Alignment:
Q  165 gagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  40252368 gagaatcgaacttgagaccttgagagaagcacactccaag 40252329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 47183435 - 47183357
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||  | |||||||||||| |||| || | |||| ||| ||||| |||||||||| ||||||||||||||    
T  47183435 aagaagccaaacttgtccaccgaaattgacaccgggaaaaatcgaacctgagatcttgagaggatcacactccaaggtc 47183357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 55256161 - 55256235
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaa 203  Q
    ||||||||||||  ||||||| |||||||||||  |||||||| ||| |||| ||||||| | ||||||||||||    
T  55256161 aagaagccaaactagcccaccaaaattggcaccgaggagaatcgaacctgaggccttgagggaagcacactccaa 55256235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 40307631 - 40307574
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaa 203  Q
    ||||||||||||||||||  | ||||| ||  |||||||||||||||||||||||||||    
T  40307631 ccaccgaaattggcaccaaag-gaatcaaatatgagaccttgagaggagcacactccaa 40307574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 7093466 - 7093401
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| ||||| ||||||| ||||||| ||| | | ||||||| |||||||||||||||| |||||    
T  7093466 ccaccaaaatttgcaccagagagaatcgaacctaaaaccttgaaaggagcacactccaagatccca 7093401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 7392070 - 7392135
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||  | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  7392070 ccaccgaaattggcaccatagggaatcgaacctgagacctttggaggagcaaactccaagatccca 7392135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 8325355 - 8325420
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtc 207  Q
    ||||||| |||||| |||| ||||||||| ||| | |||||||||| | |||||||||||||||||    
T  8325355 gcccacccaaattgacaccggggagaatcgaacctaagaccttgaggatgagcacactccaaggtc 8325420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 27971897 - 27971962
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccc 209  Q
    ||||||||||||||||||  | | |||| |||  || ||||||||||||||| |||||||||||||    
T  27971897 cccaccgaaattggcaccgcgcataatcgaaccagaaaccttgagaggagcagactccaaggtccc 27971962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 28929768 - 28929704
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| |||||||||  |||| ||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  28929768 ccacccaaattggcataaggg-gaatcgaacctgagaccttgaaaggagcacacttcaaggtccca 28929704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 2622379 - 2622439
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||| |||||| | || |||||||||||||| ||||||||    
T  2622379 aaattggcaccagagagaatcgaacctgagacatggaggaggagcacactcccaggtccca 2622439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 5609307 - 5609347
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagacc 183  Q
    ||||||||||||||||||||| ||||||| ||| |||||||    
T  5609307 gcccaccgaaattggcaccagagagaatcgaacctgagacc 5609347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 8030180 - 8030248
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| |||||| ||| || | ||||| ||||||||||||||| |||||||||||||| | ||||||    
T  8030180 gcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtccca 8030248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 9646328 - 9646388
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| || ||| ||||||| ||| ||||||||||| |||||||||||| ||| |||||    
T  9646328 gaaattgtcatcagagagaatcaaacatgagaccttgacaggagcacactcaaagatccca 9646388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 37274443 - 37274503
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||| ||||||| ||||||| ||| | |||||||||| ||||||||||||| ||||||||    
T  37274443 aaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtccca 37274503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 38740940 - 38740888
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcaca 197  Q
    |||||||||||| |||||| | ||||| ||| ||||||||| |||||||||||    
T  38740940 ccaccgaaattgacaccagagggaatcgaacctgagaccttaagaggagcaca 38740888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 38869860 - 38869800
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||||||||| | ||||| ||| ||||||||||| |||||||||||||| || |||||    
T  38869860 aaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatccca 38869800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 46329256 - 46329196
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||||||| || |||||| ||| ||| |||||||| ||||||||||||| ||||||||    
T  46329256 aaattggcaccgggaagaatcgaacctgataccttgaggaggagcacactcccaggtccca 46329196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 55427176 - 55427244
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| |||||||||||  |||||||| ||| |||||||| ||| ||||||| ||||| ||||||||    
T  55427176 gcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtccca 55427244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 9208344 - 9208277
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||| |||||    
T  9208344 gcccaccgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatccca 9208277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 6691531 - 6691591
Alignment:
Q  147 accgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||||    
T  6691531 accgaaattggcaccggagagaatcgaacctgagaccttgagaggagcacactccaaggtc 6691591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 9583464 - 9583408
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactc 200  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  9583464 cccaccgaaattggcaccagagagaatcgaactggagaccttgagaggagcacactc 9583408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 28028629 - 28028562
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| ||||||||||| ||||||||||| ||| |||||||||||||||||| ||||| |||||||||    
T  28028629 gcccatcgaaattggcatcagggagaatcgaacatgagaccttgagaggagctcactcaaaggtccca 28028562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 7484236 - 7484300
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||| || |||||||    
T  7484236 gcccaccgaaattggcaccggggggaatctaacgtgagaccttgagcggagcactcttcaaggtc 7484300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 17149565 - 17149628
Alignment:
Q  147 accgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||| ||||||| | ||||| ||| |||||||||||||||||||||||||||| |||||    
T  17149565 accgaaattagcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatccca 17149628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 33499567 - 33499499
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatct-aacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||| |||||| | |||||| ||| ||||||||||||||||||| |||||||| |||||    
T  33499567 gcccaccgaaattgacaccagagggaatctgaacctgagaccttgagaggagcaaactccaagatccca 33499499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 3907625 - 3907566
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||||| ||||||| | |||||||||||||||| ||||| |||||    
T  3907625 aaattggcaccagagagaatcgaacttgaaatcttgagaggagcacaccccaagatccca 3907566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 11448963 - 11448896
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||   |||||||| |||||||| |||||    
T  11448963 gcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatccca 11448896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 15360203 - 15360270
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  15360203 gcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatccca 15360270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 24762384 - 24762451
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||||| ||||| ||| ||| | ||||||| |||||||||||| |||||||||||    
T  24762384 gcccaccaaaattggcaccggggaggatcgaacctaagaccttaagaggagcacacaccaaggtccca 24762451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 6384013 - 6384046
Alignment:
Q  177 tgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||||||||||||||||    
T  6384013 tgagaccttgagaggagcacactccaaggtccca 6384046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 10007265 - 10007212
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaa 203  Q
    ||||||| |||||| || |||| ||||||||||||||||||||| |||||||||    
T  10007265 gaaattgacaccagagataatcaaacttgagaccttgagaggaggacactccaa 10007212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 12188287 - 12188347
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    |||||||||| || ||||||| ||||||| |||||||| ||||||||||||| ||||||||    
T  12188287 aaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtccca 12188347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 654251 - 654318
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  654251 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 654318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 28741970 - 28742013
Alignment:
Q  167 gaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||    
T  28741970 gaatcgaacctgagaccttgagaggagcacactccaagatccca 28742013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 3433580 - 3433642
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||  |||||  ||| |||| ||| ||||||||||||||||||| |||||||||||    
T  3433580 ccaccgaaatatgcaccgaggaaaatcgaacctgagaccttgagaggagcaaactccaaggtc 3433642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 9239066 - 9239000
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  9239066 cccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 9239000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 10377807 - 10377746
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||| | ||||||||||||||    
T  10377807 gcccaccgaaattggcaccatagggaattgaacctgagaccttgacatgagcacactccaag 10377746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 13753332 - 13753271
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||||||||||| ||||||  ||| ||||||||   |||||||| ||||||||    
T  13753332 gcccaccgaaattggcaccagagagaattgaacctgagacctctggaggagcaaactccaag 13753271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 22683 - 22715
Alignment:
Q  178 gagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||| ||||||||||||||||||||    
T  22683 gagaccttgagaagagcacactccaaggtccca 22715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 1373174 - 1373114
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||| |||||||||| |||||||||  ||| | |||||||||||| || ||||||||||    
T  1373174 cccaccaaaattggcactagggagaatgaaacataagaccttgagagaagaacactccaag 1373114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 1380922 - 1380862
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||||| |||||||||| |||||||||  ||| | |||||||||||| || ||||||||||    
T  1380922 cccaccaaaattggcactagggagaatgaaacataagaccttgagagaagaacactccaag 1380862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 3869794 - 3869738
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactc 200  Q
    |||||| | ||||||||| ||||||||| ||| ||||||||||| || |||||||||    
T  3869794 cccaccaatattggcaccggggagaatcgaacatgagaccttgatagaagcacactc 3869738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 20863475 - 20863407
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| |||||||||  || ||||||| ||  |||||||||||| ||||||||||||||| ||||||    
T  20863475 gcccacccaaattggcattagagagaatcaaatctgagaccttgaggaggagcacactccaaagtccca 20863407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 16172946 - 16173024
Alignment:
Q  131 aagaagccaaac--gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    ||||||||||||  ||| || |||||||||| |  |||||||| ||| |||||||||||||||||||||||||||||||    
T  16172946 aagaagccaaactagcctactgaaattggcaactaggagaatcgaacctgagaccttgagaggagcacactccaaggtc 16173024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 19145516 - 19145583
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| |||  |||||||||||||||||| |||||||| |||||    
T  19145516 gcccaccgaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatccca 19145583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 15485398 - 15485463
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||   ||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  15485398 cccaccgaaattggtgtcaggg-gaatcgaacctgagaccttgagaggagcacactccaaggtccca 15485463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 36895515 - 36895450
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||| ||||| | ||||| ||| ||| |||||||||||||||||||||||| |||||    
T  36895515 ccaccgaaattggtaccagagggaatcgaacatgaaaccttgagaggagcacactccaagatccca 36895450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 16457902 - 16457842
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||||||| ||||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  16457902 aaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtccca 16457842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 11926607 - 11926674
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||||||| ||||||||   |||||||| |||||||| |||||    
T  11926607 gcccaccgaaattggcaccagagggaatctaacctgagacctctggaggagcaaactccaagatccca 11926674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 33709606 - 33709673
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||||||||||||   |||||||| |||||||| |||||    
T  33709606 gcccaccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatccca 33709673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 31669014 - 31669068
Alignment:
Q  156 ggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||| ||||||||| ||| | ||||||||||||||||| ||||||||||||||    
T  31669014 ggcaccggggagaatcgaacctaagaccttgagaggagcagactccaaggtccca 31669068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 37421384 - 37421318
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccc 209  Q
    ||||||| ||||| ||||||||||||||| ||  ||||||| ||||||||||| |||| ||||||||    
T  37421384 gcccaccaaaattagcaccagggagaatcgaatctgagaccgtgagaggagcaaactctaaggtccc 37421318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 3315307 - 3315250
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtc 207  Q
    ||||||||||| ||||||||| ||| ||||||||||| ||||||| ||||||||||||    
T  3315307 aaattggcacctgggagaatcgaacctgagaccttgaggaggagcgcactccaaggtc 3315250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 27498836 - 27498897
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||  ||||||||| ||||||||    
T  27498836 gcccaccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaag 27498897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 40330725 - 40330664
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    ||||| ||||||| ||||||  ||||||  ||||||||||||||||||||||| ||||||||    
T  40330725 gcccaacgaaattagcaccatagagaattgaacttgagaccttgagaggagcaaactccaag 40330664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 84912 - 84856
Alignment:
Q  155 tggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggtccca 210  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||| || |||||    
T  84912 tggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatccca 84856  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 5943893 - 5943925
Alignment:
Q  178 gagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||||||||||||||||    
T  5943893 gagaccttgagaggagcacactccaaggtccca 5943925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 8780569 - 8780509
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaag 204  Q
    |||| |||||||| ||| || || |||| ||| ||||||||||||||||||||||||||||    
T  8780569 cccatcgaaattgacacaagagacaatcgaacctgagaccttgagaggagcacactccaag 8780509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 14285253 - 14285197
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggt 206  Q
    ||||||||||||| ||||||| ||| ||||||||||| |||||||||||||| ||||    
T  14285253 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggt 14285197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 16773907 - 16773839
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| ||||||||| ||| ||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  16773907 gcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtccca 16773839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 31206327 - 31206267
Alignment:
Q  150 gaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||| ||||  ||| |||||||||||| |||||||||||| | ||||||    
T  31206327 gaaattggcaccagggggaataaaacctgagaccttgagcggagcacactccgaagtccca 31206267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 1279089 - 1279034
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacact 199  Q
    ||||| |||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  1279089 ccacccaaattgacaccagagagaatctaacttgagacctcgatgaggagcacact 1279034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 8484766 - 8484833
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  8484766 gcccaccgaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatccca 8484833  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 32059545 - 32059612
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||||   ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  32059545 gcccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatccca 32059612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 210
Target Start/End: Original strand, 32340349 - 32340380
Alignment:
Q  179 agaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||||||||||||||    
T  32340349 agaccttgagaggagcacactccaaggtccca 32340380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 38684300 - 38684233
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  38684300 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 38684233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 17649014 - 17648980
Alignment:
Q  176 ttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||| |||||||||||||||||    
T  17649014 ttgagaccttgagaggatcacactccaaggtccca 17648980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 31288052 - 31288118
Alignment:
Q  144 cccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||||||||||||||||  | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  31288052 cccaccgaaattggcaccaaagggaatcgaacatgagacctttggaggagcaaactccaagatccca 31288118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 33025566 - 33025505
Alignment:
Q  149 cgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    |||||| |||| || || ||||| || |||||| |||||||||||||||||||||| |||||    
T  33025566 cgaaatcggcatcaaggggaatcaaagttgagatcttgagaggagcacactccaagatccca 33025505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 36294103 - 36294148
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagag 190  Q
    |||||||||| | |||||||||||||| ||| ||||||||||||||    
T  36294103 ccaccgaaatagtcaccagggagaatcgaacctgagaccttgagag 36294148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 30883174 - 30883242
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| |||||| |||  | ||||||  |||||||||||||||| ||||||||||||| ||||||||    
T  30883174 gcccacccaaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtccca 30883242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 34984898 - 34984842
Alignment:
Q  151 aaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaaggt 206  Q
    ||||||||||||| ||||||| ||| | ||||||||| |||||||||||||| ||||    
T  34984898 aaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggt 34984842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 5187 - 5254
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  |||||||| |||||||| |||||    
T  5187 gcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatccca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 15753 - 15814
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttga-gaggagcacactccaa 203  Q
    ||||||| |||||||||||  |||||||| ||||||||||||||| |||||||| |||||||    
T  15753 gcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaa 15814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 8286 - 8350
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccc 209  Q
    ||||||||||||||||||| | ||||| ||||||||||||   |||||||| |||||||| ||||    
T  8286 ccaccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatccc 8350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 17700 - 17764
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtc 207  Q
    |||||| |||||||||  |  |||||||| ||| ||||||||||||||||| |||||||||||||    
T  17700 gcccactgaaattggcctcgaggagaatcgaacctgagaccttgagaggagaacactccaaggtc 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 8512 - 8579
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| || |||| ||| ||||||||   |||||||| |||||||| |||||    
T  8512 gcccaccgaaattggcaccagagataatcgaacctgagacctctggaggagcaaactccaagatccca 8579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 97471 - 97538
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||  |||||||| ||| |||| |||||    
T  97471 gcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactacaagatccca 97538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 161901 - 161834
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgagaggagcacactccaaggtccca 210  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||   |||||||| |||||||| |||||    
T  161901 gcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccca 161834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 12287 - 12221
Alignment:
Q  145 ccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||| ||||||  ||||| |||||| |||||| |||||||||| ||||||| ||||||||||||||    
T  12287 ccacctaaattgataccagagagaatttaactttagaccttgaggaggagcaaactccaaggtccca 12221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 39184 - 39143
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagacct 184  Q
    ||||||||||||||||||||| | ||||| ||||||||||||    
T  39184 gcccaccgaaattggcaccagagggaatcgaacttgagacct 39143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 15299 - 15367
Alignment:
Q  143 gcccaccgaaattggcaccagggagaatctaacttgagaccttgag-aggagcacactccaaggtccca 210  Q
    ||||||| ||||||||| | | ||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  15299 gcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtccca 15367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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