View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2146_low_10 (Length: 354)

Name: NF2146_low_10
Description: NF2146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2146_low_10
NF2146_low_10
[»] chr3 (64 HSPs)
chr3 (1-276)||(45101812-45102088)
chr3 (1-169)||(41802939-41803107)
chr3 (1-173)||(55207627-55207799)
chr3 (1-173)||(41577012-41577184)
chr3 (37-173)||(41579724-41579860)
chr3 (1-173)||(52570530-52570701)
chr3 (63-176)||(29918367-29918480)
chr3 (63-176)||(29967520-29967633)
chr3 (63-176)||(30256029-30256142)
chr3 (63-175)||(28611126-28611238)
chr3 (4-160)||(49219758-49219914)
chr3 (67-173)||(2432973-2433079)
chr3 (37-175)||(19440191-19440329)
chr3 (1-115)||(34694398-34694512)
chr3 (63-153)||(46344894-46344984)
chr3 (63-176)||(29929360-29929473)
chr3 (63-176)||(29978514-29978627)
chr3 (63-163)||(42804402-42804502)
chr3 (1-176)||(55385071-55385246)
chr3 (67-173)||(7247890-7247996)
chr3 (1-173)||(51402362-51402534)
chr3 (1-160)||(13896840-13896999)
chr3 (1-88)||(43476214-43476301)
chr3 (65-176)||(43571713-43571824)
chr3 (34-173)||(6489270-6489405)
chr3 (63-173)||(19454351-19454461)
chr3 (63-176)||(66835-66947)
chr3 (10-83)||(2271286-2271359)
chr3 (63-172)||(42756097-42756206)
chr3 (1-54)||(51696538-51696591)
chr3 (92-175)||(42807655-42807738)
chr3 (34-115)||(7839498-7839577)
chr3 (63-173)||(41805701-41805811)
chr3 (1-78)||(24703379-24703456)
chr3 (34-135)||(34691600-34691701)
chr3 (1-49)||(19454315-19454363)
chr3 (10-113)||(4004776-4004879)
chr3 (3-54)||(49609439-49609490)
chr3 (63-173)||(52567700-52567810)
chr3 (10-79)||(36134354-36134423)
chr3 (1-45)||(41137773-41137817)
chr3 (1-108)||(20366194-20366301)
chr3 (1-47)||(7245155-7245201)
chr3 (1-51)||(43568925-43568975)
chr3 (126-163)||(7245098-7245135)
chr3 (34-123)||(19341591-19341680)
chr3 (302-335)||(45102115-45102148)
chr3 (63-108)||(48892151-48892195)
chr3 (63-163)||(6505977-6506077)
chr3 (37-113)||(30252563-30252639)
chr3 (34-113)||(24700718-24700797)
chr3 (40-78)||(34712266-34712304)
chr3 (63-173)||(55267378-55267488)
chr3 (34-115)||(2743393-2743474)
chr3 (63-108)||(9582549-9582594)
chr3 (40-77)||(19341597-19341634)
chr3 (63-108)||(34208619-34208664)
chr3 (34-83)||(43478827-43478876)
chr3 (63-108)||(50216880-50216925)
chr3 (40-77)||(50604423-50604460)
chr3 (63-115)||(13743288-13743340)
chr3 (37-77)||(40877776-40877816)
chr3 (63-115)||(45098827-45098878)
chr3 (63-135)||(49196475-49196547)
[»] chr4 (60 HSPs)
chr4 (3-176)||(29700268-29700441)
chr4 (1-176)||(958558-958732)
chr4 (63-163)||(33383752-33383852)
chr4 (1-176)||(44561294-44561469)
chr4 (63-176)||(4768612-4768725)
chr4 (63-178)||(955724-955839)
chr4 (63-176)||(21472510-21472623)
chr4 (66-176)||(34154431-34154541)
chr4 (63-177)||(51426470-51426584)
chr4 (37-173)||(11494481-11494616)
chr4 (1-93)||(56138269-56138361)
chr4 (36-175)||(21470838-21470977)
chr4 (37-175)||(37959720-37959858)
chr4 (63-169)||(49572926-49573032)
chr4 (43-179)||(49422074-49422205)
chr4 (34-173)||(4979914-4980053)
chr4 (62-176)||(51644498-51644613)
chr4 (63-141)||(18578618-18578696)
chr4 (67-173)||(38464796-38464901)
chr4 (63-176)||(34151543-34151661)
chr4 (1-54)||(1041991-1042044)
chr4 (119-176)||(44558634-44558691)
chr4 (1-49)||(34154392-34154440)
chr4 (1-49)||(34530759-34530807)
chr4 (1-49)||(39588127-39588175)
chr4 (63-176)||(18581332-18581434)
chr4 (34-173)||(44051089-44051228)
chr4 (1-54)||(4786298-4786351)
chr4 (63-176)||(17139560-17139671)
chr4 (54-111)||(24417433-24417490)
chr4 (1-49)||(243309-243357)
chr4 (1-49)||(6283431-6283479)
chr4 (1-49)||(51429293-51429341)
chr4 (1-49)||(56304911-56304959)
chr4 (70-173)||(6280794-6280897)
chr4 (34-108)||(9473658-9473732)
chr4 (33-115)||(9889989-9890071)
chr4 (63-161)||(37394197-37394295)
chr4 (63-161)||(50278824-50278922)
chr4 (63-161)||(56304826-56304923)
chr4 (26-83)||(6178099-6178156)
chr4 (63-173)||(6283467-6283573)
chr4 (34-115)||(15995717-15995798)
chr4 (34-115)||(19069182-19069263)
chr4 (126-175)||(48256652-48256701)
chr4 (26-83)||(49094111-49094168)
chr4 (1-54)||(42885505-42885560)
chr4 (37-80)||(28083990-28084033)
chr4 (63-114)||(33051679-33051730)
chr4 (63-161)||(8109340-8109438)
chr4 (127-176)||(3450104-3450153)
chr4 (40-77)||(37022064-37022101)
chr4 (20-49)||(37865203-37865232)
chr4 (37-85)||(9013869-9013917)
chr4 (33-77)||(11084010-11084054)
chr4 (36-108)||(17343401-17343473)
chr4 (10-50)||(28081518-28081558)
chr4 (37-77)||(40354635-40354675)
chr4 (34-86)||(49169094-49169146)
chr4 (63-115)||(50274755-50274807)
[»] chr1 (74 HSPs)
chr1 (1-176)||(36908512-36908679)
chr1 (1-86)||(42572721-42572806)
chr1 (1-85)||(49395628-49395712)
chr1 (63-176)||(41804059-41804172)
chr1 (63-182)||(46973132-46973251)
chr1 (37-175)||(26633465-26633600)
chr1 (63-176)||(13173770-13173882)
chr1 (1-173)||(13972001-13972171)
chr1 (34-176)||(38689866-38690007)
chr1 (68-176)||(19053993-19054101)
chr1 (37-173)||(46141719-46141855)
chr1 (63-176)||(4515960-4516078)
chr1 (70-176)||(35521548-35521654)
chr1 (1-54)||(29763183-29763236)
chr1 (67-163)||(35527043-35527139)
chr1 (71-178)||(21944414-21944521)
chr1 (37-176)||(36072304-36072442)
chr1 (103-175)||(7965976-7966049)
chr1 (63-176)||(36076584-36076696)
chr1 (1-49)||(27487630-27487678)
chr1 (34-108)||(45943723-45943797)
chr1 (68-173)||(6437570-6437675)
chr1 (34-115)||(15047277-15047358)
chr1 (70-163)||(25040109-25040202)
chr1 (63-176)||(29261349-29261461)
chr1 (1-101)||(6434757-6434857)
chr1 (120-176)||(7981213-7981269)
chr1 (1-49)||(14174875-14174923)
chr1 (37-173)||(18975120-18975256)
chr1 (1-49)||(49927465-49927513)
chr1 (34-153)||(6562158-6562277)
chr1 (63-172)||(36911696-36911803)
chr1 (63-173)||(49927539-49927649)
chr1 (68-177)||(14172047-14172156)
chr1 (63-108)||(27115849-27115894)
chr1 (63-162)||(19495017-19495113)
chr1 (37-173)||(49924793-49924929)
chr1 (34-117)||(3941147-3941230)
chr1 (1-40)||(26637220-26637259)
chr1 (1-108)||(29434975-29435081)
chr1 (63-101)||(14174911-14174949)
chr1 (63-161)||(27485008-27485106)
chr1 (10-47)||(49426750-49426787)
chr1 (34-106)||(3939958-3940030)
chr1 (65-173)||(8460125-8460232)
chr1 (63-115)||(30910029-30910081)
chr1 (63-115)||(41453833-41453885)
chr1 (1-45)||(51269003-51269047)
chr1 (56-108)||(51337532-51337584)
chr1 (38-77)||(18609898-18609937)
chr1 (66-177)||(51666668-51666778)
chr1 (26-88)||(19159645-19159707)
chr1 (63-173)||(23276134-23276244)
chr1 (34-124)||(23359346-23359436)
chr1 (63-113)||(29352256-29352306)
chr1 (34-88)||(29424402-29424456)
chr1 (38-84)||(38119607-38119653)
chr1 (129-175)||(42570077-42570123)
chr1 (143-176)||(1656190-1656223)
chr1 (40-77)||(6562870-6562907)
chr1 (40-77)||(16270028-16270065)
chr1 (34-115)||(44470008-44470089)
chr1 (36-109)||(45330855-45330928)
chr1 (103-163)||(1654750-1654810)
chr1 (1-37)||(4208454-4208490)
chr1 (34-86)||(20353932-20353984)
chr1 (41-77)||(26606832-26606868)
chr1 (63-135)||(30905746-30905818)
chr1 (34-86)||(31945858-31945910)
chr1 (40-76)||(41459215-41459251)
chr1 (1-49)||(44596896-44596944)
chr1 (35-75)||(47652722-47652762)
chr1 (37-77)||(49502799-49502839)
chr1 (63-115)||(50269130-50269182)
[»] chr5 (43 HSPs)
chr5 (36-177)||(18538334-18538475)
chr5 (1-173)||(20192290-20192462)
chr5 (63-173)||(18310047-18310157)
chr5 (63-177)||(34682190-34682304)
chr5 (1-113)||(18307251-18307363)
chr5 (1-85)||(35564286-35564370)
chr5 (1-104)||(25497517-25497620)
chr5 (63-166)||(41201672-41201775)
chr5 (1-113)||(542754-542866)
chr5 (69-176)||(1398538-1398645)
chr5 (63-176)||(25499913-25500028)
chr5 (34-176)||(33995145-33995287)
chr5 (63-176)||(24053114-24053227)
chr5 (37-173)||(3603148-3603284)
chr5 (17-173)||(3600273-3600430)
chr5 (63-173)||(20200174-20200284)
chr5 (63-176)||(19228672-19228785)
chr5 (64-176)||(33993214-33993326)
chr5 (1-49)||(42865768-42865816)
chr5 (34-173)||(25877559-25877697)
chr5 (61-175)||(1397374-1397488)
chr5 (10-80)||(11346037-11346107)
chr5 (34-176)||(34122458-34122600)
chr5 (35-161)||(34123933-34124059)
chr5 (34-123)||(7800984-7801073)
chr5 (34-135)||(17965824-17965925)
chr5 (63-173)||(31094500-31094609)
chr5 (17-54)||(8537221-8537258)
chr5 (26-83)||(19037459-19037516)
chr5 (63-160)||(38968045-38968142)
chr5 (120-176)||(1401428-1401484)
chr5 (38-86)||(38971624-38971672)
chr5 (40-75)||(13707936-13707971)
chr5 (66-101)||(24050036-24050071)
chr5 (38-77)||(42912881-42912920)
chr5 (37-106)||(6267997-6268067)
chr5 (63-113)||(13568101-13568151)
chr5 (68-177)||(35567058-35567167)
chr5 (40-77)||(13838427-13838464)
chr5 (38-75)||(20421947-20421984)
chr5 (37-85)||(2532505-2532552)
chr5 (37-77)||(8577004-8577044)
chr5 (35-75)||(25983397-25983437)
[»] chr7 (49 HSPs)
chr7 (1-173)||(42681931-42682103)
chr7 (1-173)||(30355203-30355375)
chr7 (1-173)||(41047715-41047886)
chr7 (63-173)||(41049215-41049324)
chr7 (63-173)||(48314611-48314720)
chr7 (63-176)||(9494832-9494945)
chr7 (5-173)||(46863312-46863480)
chr7 (68-163)||(46860458-46860553)
chr7 (63-173)||(21185556-21185666)
chr7 (63-173)||(37340239-37340349)
chr7 (1-173)||(28980136-28980309)
chr7 (1-108)||(36394902-36395009)
chr7 (36-173)||(47060864-47061000)
chr7 (210-281)||(4952467-4952539)
chr7 (34-173)||(19044231-19044369)
chr7 (34-173)||(20710267-20710405)
chr7 (63-177)||(36186499-36186612)
chr7 (63-173)||(36392062-36392172)
chr7 (63-176)||(10705182-10705295)
chr7 (1-49)||(21188390-21188438)
chr7 (96-176)||(28112776-28112856)
chr7 (63-173)||(27453620-27453730)
chr7 (63-176)||(10225869-10225983)
chr7 (63-108)||(21188426-21188471)
chr7 (38-98)||(11629743-11629803)
chr7 (1-56)||(28115496-28115551)
chr7 (66-173)||(39460490-39460597)
chr7 (3-49)||(34139932-34139978)
chr7 (64-114)||(40166787-40166837)
chr7 (302-335)||(4952559-4952592)
chr7 (63-108)||(40142687-40142732)
chr7 (10-50)||(17838710-17838750)
chr7 (63-179)||(34623406-34623522)
chr7 (63-115)||(45361644-45361696)
chr7 (34-173)||(34622436-34622575)
chr7 (126-173)||(41623904-41623951)
chr7 (126-176)||(11100536-11100586)
chr7 (63-161)||(29593354-29593452)
chr7 (1-51)||(40587720-40587770)
chr7 (35-77)||(42795116-42795158)
chr7 (1-51)||(43686871-43686921)
chr7 (34-87)||(45350930-45350982)
chr7 (3-44)||(45364186-45364227)
chr7 (63-115)||(618751-618803)
chr7 (33-113)||(9491405-9491485)
chr7 (37-77)||(10098011-10098051)
chr7 (34-86)||(17834511-17834563)
chr7 (63-115)||(34742421-34742473)
chr7 (129-173)||(36395037-36395081)
[»] chr6 (33 HSPs)
chr6 (66-176)||(13479660-13479770)
chr6 (1-154)||(12783921-12784074)
chr6 (64-173)||(13404659-13404768)
chr6 (184-276)||(31605061-31605154)
chr6 (63-173)||(29286166-29286276)
chr6 (1-173)||(13401423-13401595)
chr6 (36-176)||(23958824-23958964)
chr6 (63-173)||(35021289-35021399)
chr6 (63-176)||(18001148-18001260)
chr6 (67-176)||(32643551-32643660)
chr6 (63-115)||(7537193-7537245)
chr6 (65-155)||(23986009-23986099)
chr6 (63-173)||(25141105-25141215)
chr6 (126-176)||(32026039-32026089)
chr6 (1-49)||(29061331-29061379)
chr6 (1-76)||(26855929-26856004)
chr6 (79-173)||(6320531-6320625)
chr6 (63-173)||(18605982-18606091)
chr6 (1-47)||(29065791-29065837)
chr6 (1-47)||(29074804-29074850)
chr6 (1-47)||(29079568-29079614)
chr6 (1-47)||(29107377-29107423)
chr6 (3-49)||(32034358-32034404)
chr6 (26-83)||(6204854-6204911)
chr6 (26-83)||(11691821-11691878)
chr6 (34-115)||(31768748-31768829)
chr6 (29-88)||(9049076-9049135)
chr6 (302-333)||(31605181-31605212)
chr6 (63-173)||(7361128-7361238)
chr6 (34-88)||(9048097-9048151)
chr6 (126-176)||(17996539-17996589)
chr6 (40-77)||(7911661-7911698)
chr6 (103-163)||(34801484-34801544)
[»] chr8 (43 HSPs)
chr8 (1-173)||(41858087-41858257)
chr8 (1-173)||(18441405-18441577)
chr8 (63-173)||(18438571-18438681)
chr8 (63-176)||(7168022-7168135)
chr8 (63-172)||(41855306-41855415)
chr8 (17-175)||(42602395-42602553)
chr8 (36-176)||(4866369-4866508)
chr8 (65-168)||(38871741-38871844)
chr8 (63-173)||(38872956-38873066)
chr8 (1-54)||(26451536-26451589)
chr8 (35-173)||(34823014-34823152)
chr8 (63-181)||(3395821-3395939)
chr8 (37-115)||(42605234-42605312)
chr8 (63-163)||(28168625-28168723)
chr8 (34-108)||(21406269-21406343)
chr8 (34-108)||(21800761-21800835)
chr8 (34-108)||(21835176-21835250)
chr8 (26-83)||(486039-486096)
chr8 (1-54)||(41274648-41274701)
chr8 (1-49)||(3395927-3395975)
chr8 (1-49)||(22547504-22547552)
chr8 (1-49)||(38871834-38871882)
chr8 (63-173)||(35389445-35389555)
chr8 (63-161)||(45454355-45454453)
chr8 (63-108)||(28646273-28646318)
chr8 (63-108)||(28650857-28650902)
chr8 (35-115)||(1114738-1114818)
chr8 (41-77)||(3696076-3696112)
chr8 (40-76)||(4529233-4529269)
chr8 (63-118)||(1116214-1116269)
chr8 (34-85)||(12715719-12715769)
chr8 (36-107)||(18205789-18205860)
chr8 (34-141)||(35962276-35962383)
chr8 (63-161)||(43188022-43188121)
chr8 (40-115)||(45133238-45133313)
chr8 (63-173)||(39751011-39751120)
chr8 (71-161)||(44052260-44052350)
chr8 (63-104)||(39489-39530)
chr8 (41-158)||(35966753-35966870)
chr8 (4-49)||(37779713-37779758)
chr8 (63-124)||(41743876-41743937)
chr8 (34-86)||(7340091-7340143)
chr8 (33-85)||(40740931-40740983)
[»] chr2 (56 HSPs)
chr2 (1-173)||(41500198-41500370)
chr2 (63-173)||(35493367-35493477)
chr2 (1-163)||(24512114-24512276)
chr2 (63-176)||(2917617-2917730)
chr2 (63-176)||(45475374-45475487)
chr2 (63-176)||(23409527-23409640)
chr2 (34-173)||(25184827-25184965)
chr2 (1-54)||(2920480-2920533)
chr2 (34-173)||(28342460-28342599)
chr2 (34-113)||(24601636-24601715)
chr2 (34-113)||(24612399-24612478)
chr2 (63-178)||(41181369-41181484)
chr2 (1-170)||(2648057-2648226)
chr2 (66-163)||(35490627-35490724)
chr2 (63-163)||(12905496-12905596)
chr2 (1-49)||(29093792-29093840)
chr2 (1-135)||(43491084-43491218)
chr2 (37-135)||(45137433-45137531)
chr2 (67-172)||(82292-82396)
chr2 (66-174)||(19186683-19186791)
chr2 (36-176)||(34921758-34921897)
chr2 (68-175)||(8268780-8268887)
chr2 (36-175)||(19187222-19187361)
chr2 (63-161)||(1096544-1096642)
chr2 (1-91)||(10365756-10365846)
chr2 (93-173)||(16580482-16580562)
chr2 (19-75)||(26858148-26858204)
chr2 (1-48)||(40679561-40679608)
chr2 (26-88)||(17424154-17424216)
chr2 (63-173)||(24607594-24607704)
chr2 (63-132)||(2648776-2648845)
chr2 (1-56)||(34638194-34638246)
chr2 (1-54)||(39393093-39393146)
chr2 (37-86)||(44100726-44100775)
chr2 (63-115)||(3795332-3795384)
chr2 (64-108)||(36255019-36255063)
chr2 (63-163)||(41497419-41497519)
chr2 (63-178)||(45479820-45479935)
chr2 (37-76)||(28472087-28472126)
chr2 (67-178)||(41053698-41053809)
chr2 (63-170)||(43950268-43950374)
chr2 (63-113)||(12908455-12908505)
chr2 (40-77)||(2983433-2983470)
chr2 (26-83)||(3937841-3937898)
chr2 (34-83)||(7189948-7189997)
chr2 (40-77)||(40221133-40221170)
chr2 (40-77)||(41565351-41565388)
chr2 (63-160)||(43493283-43493380)
chr2 (34-86)||(213449-213501)
chr2 (64-96)||(14181849-14181881)
chr2 (37-85)||(17688308-17688355)
chr2 (34-86)||(18003269-18003321)
chr2 (41-113)||(30271071-30271143)
chr2 (63-115)||(38945757-38945809)
chr2 (35-75)||(40055502-40055542)
chr2 (34-86)||(41053565-41053617)
[»] scaffold0618 (1 HSPs)
scaffold0618 (63-153)||(3843-3932)
[»] scaffold0388 (1 HSPs)
scaffold0388 (66-180)||(11739-11853)
[»] scaffold0192 (2 HSPs)
scaffold0192 (1-78)||(18863-18940)
scaffold0192 (82-176)||(16346-16439)
[»] scaffold0199 (1 HSPs)
scaffold0199 (10-83)||(12361-12434)
[»] scaffold0360 (1 HSPs)
scaffold0360 (63-163)||(7330-7430)
[»] scaffold0341 (2 HSPs)
scaffold0341 (34-153)||(17348-17467)
scaffold0341 (40-77)||(18060-18097)
[»] scaffold0219 (2 HSPs)
scaffold0219 (63-108)||(15705-15750)
scaffold0219 (34-108)||(20109-20183)
[»] scaffold0012 (1 HSPs)
scaffold0012 (63-135)||(232523-232595)
[»] scaffold0188 (1 HSPs)
scaffold0188 (126-176)||(27377-27427)
[»] scaffold0176 (1 HSPs)
scaffold0176 (3-49)||(857-903)
[»] scaffold0126 (1 HSPs)
scaffold0126 (120-176)||(15920-15976)
[»] scaffold0340 (1 HSPs)
scaffold0340 (34-163)||(1178-1306)
[»] scaffold0147 (1 HSPs)
scaffold0147 (127-176)||(885-934)
[»] scaffold0057 (1 HSPs)
scaffold0057 (63-132)||(23253-23322)
[»] scaffold0169 (1 HSPs)
scaffold0169 (66-98)||(1686-1718)


Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 45101812 - 45102088
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||    
T  45101812 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaagaaaacctcggcagttaactgcagccggtttttgaattcctcaac 45101911  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttcctcaagaagcaatgccatatatcc 200  Q
    |||||||| |||||| || ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  45101912 aattaactgccgaggggataaaaacgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttcctcaagaagcaatgctatatatcg 45102011  T
Q  201 ggaaggatgttatagcgaagaactcacgattgaggttccaaccaatgaaagcagctgctggccac-aaacatggggg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  45102012 ggaaggatgttatagcgaagaactcacgattgaggttccaaccaatgaaagaaactgctggccacaaaacatggggg 45102088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 41803107 - 41802939
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |    | |||||||||||||||||||||||||| ||||| ||| |    
T  41803107 tgagagagcttctgccagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggc 41803008  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaac 169  Q
    | |||||| |||||  | |||||  ||||||||||  | |  |||| || |||||||||||||||||||    
T  41803007 agttaactgccgagtgggcaaaaacgtattttactcgtatttctcagccatatgaaatgtgtcgacaac 41802939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 55207627 - 55207799
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | |    | | |||||||||||||| ||||||||||||||| ||| |    
T  55207627 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggc 55207726  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | |||||| |||| | | |||||| ||||||||||  |||  |||| || ||||||||||||| ||| |||||    
T  55207727 agttaactgccgatggggcaaaagagtattttactcgtgtttctcagccatatgaaatgtgtcaacatcaatt 55207799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 41577184 - 41577012
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||      ||| |||||||||||| ||| ||||| ||||| |||||    
T  41577184 tgagagagcttctgcaagatttgtagcagaagatcctcggcagtttactaccgaagtttttgtcgacagttaactgcaaccgattttttaattcatcgac 41577085  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | ||||||  |||  || |||||  |||||||| || | |  |||| |||||||||||||||| |||||||||    
T  41577084 agttaactgtcgaaaaggcaaaaacgtattttatttgtatttctcagccttatgaaatgtgtcaacaacaatt 41577012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 41579724 - 41579860
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    |||||||||||||||||| |    | ||||||||||||||||||||||| |||||||||||  ||||||||| |||||| |  ||||  |||||||||||    
T  41579724 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattttactt 41579823  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    |||||||||| ||||||| || ||||| |||||||||    
T  41579824 atgtgcctcagccttatgcaacgtgtcaacaacaatt 41579860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 52570530 - 52570701
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |      |||| |||||||||||| |||||||||||||| ||| |    
T  52570530 tgagagagtttctgccagatttgtagtagaagatcctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggc 52570629  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | |||||| |||||| || ||||  |||||||| |  ||||||||| ||||||| |||||||| || ||||||    
T  52570630 agttaactgccgagggga-aaaaacgtattttaatcgtgtgcctcagccttatgcaatgtgtcaacgacaatt 52570701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 29918367 - 29918480
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||| |||||  ||| || |||| | |||||| | |||||  ||||||||||||||||||||| ||||||||||| |||    
T  29918367 tcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttacttatgtgcctcagccttatgaaatatgt 29918466  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  29918467 caacaacaattttc 29918480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 29967520 - 29967633
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||| |||||  ||| || |||| | |||||| | |||||  ||||||||||||||||||||| ||||||||||| |||    
T  29967520 tcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttacttatgtgcctcagccttatgaaatatgt 29967619  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  29967620 caacaacaattttc 29967633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 30256029 - 30256142
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||||| ||| | ||    |||||||||||| ||||||||| | |||||||||||||    
T  30256029 tcggcagttaactgcagccggttttttaattcctcggcagttaactaccaagggggcatttatgtattttacttgtgtgcctcagctttatgaaatgtgt 30256128  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  30256129 caacaacaattttc 30256142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 28611126 - 28611238
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||||||||| |||| || |||||| |||||| | ||||| | |||||||||| |||| |||| |||||||||||||||    
T  28611126 tcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatattttacttgtgtgtctcagccttatgaaatgtgt 28611225  T
Q  163 cgacaacaatttt 175  Q
      | |||||||||    
T  28611226 aaagaacaatttt 28611238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 49219758 - 49219914
Alignment:
Q  4 gagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaat 103  Q
    |||||||||||  | |||||||||||||||||||||  ||||||||||| | |    | ||||||||||||||||||||| |||  ||||||||| || |    
T  49219758 gagagcttctgtcaaatttgtagcagaagatcctcgatagttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctcggcagt 49219857  T
Q  104 taactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgt 160  Q
    |||||||||||||| ||||| |||||||||||  |||| | || |||||| ||||||    
T  49219858 taactaccgaggaggcaaaattgtattttactagtgtggcacagccttatcaaatgt 49219914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 2432973 - 2433079
Alignment:
Q  67 cagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgac 166  Q
    |||||||||| | |||||| ||||||||||||||| |||||| |||||| || ||||| ||||||||||  ||||||||| ||||||| |||||||| ||    
T  2432973 cagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtattttactcgtgtgcctcagccttatgcaatgtgtcaac 2433072  T
Q  167 aacaatt 173  Q
    |||||||    
T  2433073 aacaatt 2433079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 19440329 - 19440191
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    |||||||||||||||||| |    | |||||||||||||||||||||||| ||||||| ||| || |||||| |||||||| ||||||| |||||||||     
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgaggaggcaaaagtttattttactc 19440230  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
     ||||||||| | ||||| ||||| || ||| |||||||    
T  19440229 gtgtgcctcagctttatgcaatgtatcaacagcaatttt 19440191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34694398 - 34694512
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |      ||||||||| ||||||||||| |||  |||||||||||    
T  34694398 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgac 34694497  T
Q  101 aattaactaccgagg 115  Q
    | |||||| ||||||    
T  34694498 agttaactgccgagg 34694512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 46344984 - 46344894
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttat 153  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||| | |||||   |||||||||| ||||||||||||||||    
T  46344984 tcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttacttgtgtgcctcaaccttat 46344894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 29929473 - 29929360
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||  |||||   |||||   |||||||||| ||||||||| |||||| ||||||||    
T  29929473 tcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttacttgtgtgcctcagccttataaaatgtgt 29929374  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  29929373 caacaacaattttc 29929360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 29978627 - 29978514
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||  |||||   |||||   |||||||||| ||||||||| |||||| ||||||||    
T  29978627 tcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttacttgtgtgcctcagccttataaaatgtgt 29978528  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  29978527 caacaacaattttc 29978514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 42804502 - 42804402
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||| |  |||||| ||||||||| || ||||||| ||||| | | |||||||||||||||| ||||||||| |||||||||||||||    
T  42804502 tcggcagttaactgcaactagttttttaattcctcggcagttaactatcgagggggctaaagtgtattttacttgtgtgcctcagccttatgaaatgtgt 42804403  T
Q  163 c 163  Q
    |    
T  42804402 c 42804402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 55385246 - 55385071
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |    | ||||||||||||||||||||| |||  ||  | ||| |    
T  55385246 tgagagagcttctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggc 55385147  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    | |||||| |||||| | |||||  ||   |||||  |||||| |||||||||| ||||||   ||||||||||||    
T  55385146 agttaactgccgagggggcaaaaacgtcaattactcgtgtgccacaaccttatgcaatgtgggaacaacaattttc 55385071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 7247890 - 7247996
Alignment:
Q  67 cagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgac 166  Q
    ||||||||||||||||||| |||||||||||| || |||||| |||||| | |||||| |||||||| |  ||||||||| ||||||  |||||||| ||    
T  7247890 cagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtattttattcgtgtgcctcagccttatccaatgtgtcaac 7247989  T
Q  167 aacaatt 173  Q
    |||||||    
T  7247990 aacaatt 7247996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 51402362 - 51402534
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||| |    | ||| ||||||||| ||  || ||||||||||  ||  |    
T  51402362 tgagagagcttctgacagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcgacagttaactacaatcgatttttgaattattctgc 51402461  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    |||||||| | |||||  |||||  ||||||||||  |||  |||| || ||||||||||||| ||| |||||    
T  51402462 aattaactgctgaggaagcaaaaacgtattttactcgtgtttctcagccatatgaaatgtgtcaacatcaatt 51402534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 13896840 - 13896999
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||| |||| ||| |||||||||||||||||| |    | ||| ||||||||||||||| ||| || ||||| ||  |    
T  13896840 tgagagagcttctgccagatttgtagtagaaaatcttcggcagttaactaccgaggttttcctcgacagttaactgcagccagttattaaattcttcagc 13896939  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgt 160  Q
    |||||||| |||||||| |||||   |||||||||  |||| || | ||||||| |||||    
T  13896940 aattaactgccgaggagtcaaaaacatattttactcgtgtgtcttagccttatgcaatgt 13896999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43476301 - 43476214
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttttt 88  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||| |    | ||||||||||||||||||||| ||||    
T  43476301 tgagagagcttctgtcagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttt 43476214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 43571713 - 43571824
Alignment:
Q  65 ggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcg 164  Q
    ||||||||||||||||||  |||||||||||||  || |||||| |||||| | |||||   |||||||||| ||| ||| ||||||||| ||||||||     
T  43571713 ggcagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattttacttgtgtacctgaaccttatgtaatgtgtca 43571812  T
Q  165 acaacaattttc 176  Q
    ||||||||||||    
T  43571813 acaacaattttc 43571824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 6489405 - 6489270
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    ||||||||||||||||||||| ||   | |||||||||||||||||||||||| | ||||||||| |    |||| |||||| | |||||  |||  |||    
T  6489405 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggtttcttaattcctcggc----aactgccgagggggcaaaaacgtaaatta 6489310  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||| ||||||||||||||||| |||||||| ||| |||||    
T  6489309 cttgtgtgcctcaaccttatgcaatgtgtcaacagcaatt 6489270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 19454351 - 19454461
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||| ||| ||||||||||||||  || |||||| |||||  | |||||| ||||||||||  |||| |||||||||||| ||||| |    
T  19454351 tcggcagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatgtat 19454450  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  19454451 caacaacaatt 19454461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 66947 - 66835
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||| |||||||||||||||| |||||||| ||||| || |||||| |||||| | |||||| ||||||||||  |||| |||| |||||| ||||||||    
T  66947 tcggtagttaactgcagccgg-ttttgaatacctcggcagttaactgccgagggggcaaaagcgtattttactcgtgtgtctcagccttatcaaatgtgt 66849  T
Q  163 cgacaacaattttc 176  Q
    | |||||| |||||    
T  66848 caacaacagttttc 66835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 2271286 - 2271359
Alignment:
Q  10 ttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| ||   | |||||||||||||||||||||    
T  2271286 ttctgccagatttgtagcagaagatcctcggcagttaactcccgaggattccctcggcagttaactgcagccgg 2271359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 42756206 - 42756097
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||| |||| |||| |||||||||||| |||||| | |||| | |||||  |||||||||| ||||  || |||||||| ||||||||    
T  42756206 tcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtattttactcatgtttctgaaccttatcaaatgtgt 42756107  T
Q  163 cgacaacaat 172  Q
    | ||||||||    
T  42756106 caacaacaat 42756097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51696538 - 51696591
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  51696538 tgagagagcttctgccagatttgcagcagaagatcctcggcagttaactaccga 51696591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 42807655 - 42807738
Alignment:
Q  92 ttcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
    |||||||||| |||||| |||||||| ||||| ||||||||| || ||||| ||| |||||||||||||||  |||||||||||    
T  42807655 ttcctcgacagttaactgccgaggaggcaaaaatgtattttatttgtgtgcatcagccttatgaaatgtgttaacaacaatttt 42807738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 7839498 - 7839577
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| ||   | |||| |||||||||||||||||||||||||||||||||| || ||| ||||||    
T  7839498 tcctcggcagttaactaccgaggat--cctcggtagttaactgcagccggtttttgaattcctcgacagtttactgccgagg 7839577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 41805701 - 41805811
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||| |||||||||| ||| ||||| |||||| |||||| |||||||  |||||  |||  |||||| ||||||||| ||||||| |||||||    
T  41805701 tcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcctcagccttatgcaatgtgt 41805800  T
Q  163 cgacaacaatt 173  Q
    |  ||||||||    
T  41805801 catcaacaatt 41805811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24703379 - 24703456
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgca 78  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| | || ||   | ||||||||||||||||    
T  24703379 tgagagagcttctgccagatttgtagcagaagatcatcggcagttaactcctgaggatttcctcggcagttaactgca 24703456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 34691701 - 34691600
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    ||||||||||||||||||||| |    | ||| ||||||||||||||||| |||| | ||||||| || |||||| |||||||| ||||| |||||||||    
T  34691701 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgaggaggcaaaattgtatttta 34691602  T
Q  134 ct 135  Q
    ||    
T  34691601 ct 34691600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19454315 - 19454363
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  19454315 tgagagagcttctgccagatttgtagtagaagatcctcggcagttaact 19454363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 4004776 - 4004879
Alignment:
Q  10 ttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaacta 109  Q
    |||||| || |||||||||||||||||||||||||||| |||||| |    | ||||||||||||||||||||| |||  ||  | ||| ||||||||||    
T  4004776 ttctgccaggtttgtagcagaagatcctcggcagttaagtaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcaattaacta 4004875  T
Q  110 ccga 113  Q
    ||||    
T  4004876 ccga 4004879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 49609490 - 49609439
Alignment:
Q  3 agagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  49609490 agagagcttatgccagatttgtagcagaagttcctcggcagttaactaccga 49609439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 52567810 - 52567700
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||| |||||||| ||||||||||  ||| || |||||| ||||| || |||||  ||||||||||  ||||||||| ||||||| || || |    
T  52567810 tcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttactcgtgtgcctcagccttatgcaacgtat 52567711  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  52567710 caacaacaatt 52567700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 36134423 - 36134354
Alignment:
Q  10 ttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcag 79  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| |    | |||||||||||||||||    
T  36134423 ttctgccagatttgtagcagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgcag 36134354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41137817 - 41137773
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagtt 45  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  41137817 tgagagagcttctgccagatttgtagcagaagatcctcggtagtt 41137773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20366301 - 20366194
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||| ||||||||  |||||||||| |||||||||||| || ||||||||||| |      |  ||||||||||||||| ||||||||||||||||| |    
T  20366301 tgagaaagcttctggtagatttgtagtagaagatcctcgacaattaactaccgaggttttttttagcagttaactgcagctggtttttgaattcctcggc 20366202  T
Q  101 aattaact 108  Q
    | ||||||    
T  20366201 agttaact 20366194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7245201 - 7245155
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaa 47  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||    
T  7245201 tgagagagcttctgtcagatttgtagcagaagatactcggcagttaa 7245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43568975 - 43568925
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactac 51  Q
    ||||||||||||||  ||||||||| |||||||||||| ||||||||||||    
T  43568975 tgagagagcttctgtcagatttgtaacagaagatcctcagcagttaactac 43568925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 7245135 - 7245098
Alignment:
Q  126 gtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  7245135 gtattttacttgtgtgcctcaaccttatgaaatgtgtc 7245098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 19341591 - 19341680
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaa 123  Q
    |||||||||||||||| ||||||    | |||| |||||||||||||||| |||  ||||||||| || |||||| |||||| |||||||    
T  19341591 tcctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaa 19341680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 45102115 - 45102148
Alignment:
Q  302 atgaatcctatggctattaacttgccagcaatgt 335  Q
    ||||||||||||||||||||||||||||||||||    
T  45102115 atgaatcctatggctattaacttgccagcaatgt 45102148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 48892151 - 48892195
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  48892151 tcggcagttaactgcagccggttttt-aattcctcgacagttaact 48892195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 6505977 - 6506077
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||| | ||||||| | || |||||| | |||| |||||||  |||  |||||  ||||||||| ||||||  |||||||    
T  6505977 tcggcagttaactgcagccggtttcttaattccttggcagttaacttctgaggggacaaaaacgtaaattactcgtgtgcctcagccttatacaatgtgt 6506076  T
Q  163 c 163  Q
    |    
T  6506077 c 6506077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 30252639 - 30252563
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    |||||| || ||| |||| |||| | ||||||||||||| |||||||||||  | |||||||||| |||||||||||    
T  30252639 tcggcaatttactgccgaggaaatcctcggcagttaactacagccggttttgtatttcctcgacagttaactaccga 30252563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 24700797 - 24700718
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    ||||||||||||||||||||| ||   | |||| ||||||||||| |||| |||  |||||||||||| |||||| ||||    
T  24700797 tcctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactgccga 24700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 34712266 - 34712304
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgca 78  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  34712266 gcagttaactaccgaggaaaacctcggcagttaactgca 34712304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 55267488 - 55267378
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||| ||||||||||||| ||||||||||| ||| || ||||||  ||||| | |||||  |||  |||||  |||| |||| ||||||| || ||||    
T  55267488 tcggcaattaactgcagccgatttttgaattcttcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgtctcagccttatgcaacgtgt 55267389  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  55267388 caacaacaatt 55267378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 2743474 - 2743393
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    |||||||||||||||| |||| |    | ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  2743474 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 2743393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 9582594 - 9582549
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    ||||||||||||||||| ||||||||||||| |||| || ||||||    
T  9582594 tcggcagttaactgcagtcggtttttgaatttctcggcagttaact 9582549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 19341634 - 19341597
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  19341634 gcagttaactaccgaggaaaacttcggcagttaactgc 19341597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 34208664 - 34208619
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    ||||||||||||||||   ||||||| |||||||||||||||||||    
T  34208664 tcggcagttaactgcaattggtttttaaattcctcgacaattaact 34208619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 43478827 - 43478876
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    |||||||||||||||||||||||    | |||||||||||||||||||||    
T  43478827 tcctcggcagttaactaccgaagttttcctcggcagttaactgcagccgg 43478876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 50216880 - 50216925
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    ||||||||||||||||||||| |||| ||||||||| || ||||||    
T  50216880 tcggcagttaactgcagccggatttttaattcctcggcagttaact 50216925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 50604460 - 50604423
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  50604460 gcagttaactaccgaggaaaacctcggcagttaactgc 50604423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 13743340 - 13743288
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  13743340 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 13743288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 40877816 - 40877776
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||||||| ||||||||| |||||| |||||||||||||||    
T  40877816 tcggcagtaaactaccgaggaaaacttcggcagttaactgc 40877776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 45098878 - 45098827
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||| ||||||    
T  45098878 tcggcaattaactgcagccg-tttttgaattcctcggcagttaactgccgagg 45098827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 49196475 - 49196547
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    |||| ||||||||||| |||| |||| |||||||||||| ||| ||| ||||| | |||||  ||||||||||    
T  49196475 tcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttact 49196547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 29700268 - 29700441
Alignment:
Q  3 agagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaa 102  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |    | ||||||||||||||||||||||| |||||||||||  ||     
T  29700268 agagagcttctgccagatttgtagcagaagatcatcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcag 29700367  T
Q  103 ttaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||||||  |||||||||||||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  29700368 ttaactgtcgaggagacaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattttc 29700441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 958558 - 958732
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |    | |||||||||||||||| ||||||||||||||| ||| |    
T  958558 tgagagagcttctgccggatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcatcg-c 958656  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    | ||||||  ||||  |||||||  ||||||||||||||||||||| |||||| ||||||||| ||| ||||||||    
T  958657 agttaactgtcgagaggacaaaaacgtattttacttatgtgcctcagccttataaaatgtgtcaacatcaattttc 958732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 33383852 - 33383752
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||||| || ||||| |||||||||||| ||||||| |||||||||||||||||    
T  33383852 tcggcagttaactgcagtcggtttttaaaatcctcgacaattaactaccgagaaggcaaaaatgtattttacttgtgtgcctaaaccttatgaaatgtgt 33383753  T
Q  163 c 163  Q
    |    
T  33383752 c 33383752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 44561294 - 44561469
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||      | |||| ||||||||||||||||||||| | || |||| |    
T  44561294 tgagagagcttctgccagatttgtagcagacgatcctcggcagttaactaccgagattttcctcggtagttaactgcagccggttttttatttactcggc 44561393  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    | ||||| ||||||  | |||||  ||||||||||  |||  |||| |||||||||||||||| ||||||||||||    
T  44561394 agttaacaaccgagagggcaaaatcgtattttactcgtgtttctcagccttatgaaatgtgtcaacaacaattttc 44561469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 4768725 - 4768612
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||| | |||||||||||||| || |||||| |||||| | ||||| | |||||||||| ||||| ||| |||||||||||||||    
T  4768725 tcggcagttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtgt 4768626  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  4768625 caacaacaattttc 4768612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 955839 - 955724
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||| ||||||||||||||  || |||||| || | ||| |||||  ||||||||||| ||||||||||| |||||||||||||    
T  955839 tcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtattttacttgtgtgcctcaactttatgaaatgtgt 955740  T
Q  163 cgacaacaattttcct 178  Q
    | ||| ||||||||||    
T  955739 caacatcaattttcct 955724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 21472510 - 21472623
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||| ||||||||||||||| || |||||| |||||| | |||||  ||||||||||  |||  |||| |||||||||||||||    
T  21472510 tcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgt 21472609  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  21472610 caacaacaattttc 21472623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 34154431 - 34154541
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcga 165  Q
    ||||||||||||||||||||||| ||||||||| || |||||| |||| | ||||||| ||||||||||   |||  |||| |||||||||||||||| |    
T  34154431 gcagttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaatgtattttacccgtgtttctcagccttatgaaatgtgtcaa 34154530  T
Q  166 caacaattttc 176  Q
    |||||||||||    
T  34154531 caacaattttc 34154541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 51426584 - 51426470
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||  |||   |||||||  ||||||||||| ||||||| | |||||||||| ||||    
T  51426584 tcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattttacttgtgtgcctaagccttatgaaacgtgt 51426485  T
Q  163 cgacaacaattttcc 177  Q
    | |||||||||||||    
T  51426484 caacaacaattttcc 51426470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 11494616 - 11494481
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    |||||||||||||||||| |    | ||||||||||||||||||||||||| ||||||||||||| |||| | |||||| |||||||  ||||||||||     
T  11494616 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttt-gaattcctcgacagttaattgccgaggggacaaaaacgtattttactc 11494518  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
     |||  |||| |||| | |||||||||||||||||||    
T  11494517 gtgtttctcacccttttcaaatgtgtcgacaacaatt 11494481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 56138361 - 56138269
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaatt 93  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |    | ||||||||||||||||||||| |||| ||||    
T  56138361 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcggcagttaactgcagccggatttttaatt 56138269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 21470977 - 21470838
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    ||||||||||||||||||| |    | || || ||||||||||| | |||||||||| |||||||| |||||| ||||| ||||||||  ||||||||||    
T  21470977 ctcggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtattttact 21470878  T
Q  136 tatgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
    | ||||||||||||||||  |||||||  | |||||||||    
T  21470877 tgtgtgcctcaaccttatccaatgtgtaaagaacaatttt 21470838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 37959720 - 37959858
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    |||||||||||||||||| |    | |||||||||||||||||| |||| || |||||||| ||| |||||| |||||| |  ||||  ||||||||||     
T  37959720 tcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttactc 37959819  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
     ||||||||| ||||||| |||||||| |||||||||||    
T  37959820 gtgtgcctcagccttatgtaatgtgtcaacaacaatttt 37959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 49572926 - 49573032
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||  ||| | | |||||  ||||||||||| ||||||||| ||||||| |||||||    
T  49572926 tcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgt 49573025  T
Q  163 cgacaac 169  Q
    | |||||    
T  49573026 caacaac 49573032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 49422205 - 49422074
Alignment:
Q  43 gttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgc 142  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||| || ||     |||| | | |||||  |||||||| || ||||     
T  49422205 gttaactaccgaggaaaacctcgacagttaactgcagccggttttttaattcctcggcagtt-----ccgaaggggcaaaaacgtattttatttgtgtga 49422111  T
Q  143 ctcaaccttatgaaatgtgtcgacaacaattttcctc 179  Q
    |||| |||||||||||||||  |||||||||||||||    
T  49422110 ctcagccttatgaaatgtgtaaacaacaattttcctc 49422074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 4979914 - 4980053
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||||||||||||||||||||  |   | || |||||||||||||||||||||||||| || |||||| |||||| ||||||    ||||  |||  |||    
T  4979914 tcctcggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgagggaggaaaaacgtaaatta 4980013  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||  ||||||||||||||||| |||||||| |||||||||    
T  4980014 ctcgtgtgcctcaaccttatgcaatgtgtcaacaacaatt 4980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 51644498 - 51644613
Alignment:
Q  62 atcggcagttaactgcagccggtttttgaattcctcgacaattaact-accgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgt 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | |   |   | |||||  ||||||||||||||||||||| ||| || ||||||    
T  51644498 atcggcagttaactgcagccgatttttgaattcctcgacaattaattgataaaaagggcaaaatggtattttacttatgtgcctcagcctaataaaatgt 51644597  T
Q  161 gtcgacaacaattttc 176  Q
    ||| ||||||||||||    
T  51644598 gtcaacaacaattttc 51644613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 18578696 - 18578618
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtg 141  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||| || ||||| ||||| |||||||||||| ||||    
T  18578696 tcggcagataactgcagccgttttttgaattcctcgacagttaactgccaaggaggcaaaaatgtattttacttgtgtg 18578618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 38464796 - 38464901
Alignment:
Q  67 cagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgac 166  Q
    ||||||||||||||||||||  |||||||||| || ||||||  ||||||  |||||   ||||||||| |||| |||||||||||||||||||||| ||    
T  38464796 cagttaactgcagccggtttc-gaattcctcgtcatttaactgtcgaggaagcaaaatcatattttactcatgtacctcaaccttatgaaatgtgtcaac 38464894  T
Q  167 aacaatt 173  Q
    |||||||    
T  38464895 aacaatt 38464901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 34151661 - 34151543
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaacta----ccgaggagacaaaagtgta-ttttacttatgtgcctcaaccttatgaaa 157  Q
    |||||||||||||||||||| |||||||||| |||| || |||||||    |||||||| |||||  ||| |||||||||||||||||||| ||||  ||    
T  34151661 tcggcagttaactgcagccgatttttgaattactcggcatttaactaactgccgaggaggcaaaaacgtatttttacttatgtgcctcaacgttatctaa 34151562  T
Q  158 tgtgtcgacaacaattttc 176  Q
    | |||| ||||||||||||    
T  34151561 tatgtcaacaacaattttc 34151543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1042044 - 1041991
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  1042044 tgagagagcttatgccagatttgtagtagaagatcctcggcagttaactaccga 1041991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 44558691 - 44558634
Alignment:
Q  119 caaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||    
T  44558691 caaaagtgtattttacttgtgtgcctcagccttatgtaatgtgtcaacaacaattttc 44558634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34154392 - 34154440
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  34154392 tgagagagcttctgccagatttgtagcagaagatcctctgcagttaact 34154440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34530759 - 34530807
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  34530759 tgagagagcttctgccaaatttgtagcagaagatcctcggcagttaact 34530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39588175 - 39588127
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  39588175 tgagagagcttctgccatatttgtagcagaagatcctcggcagttaact 39588127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 18581332 - 18581434
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||| |||||||||||||||||| | ||||            ||||| | ||||| |||| |||||||||||||||||||||||||    
T  18581332 tcggcagttaactgcagctggtttttgaattcctcgatagttaag-----------caaaattatatttaacttgtgtgcctcaaccttatgaaatgtgt 18581420  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  18581421 caacaacaattttc 18581434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 44051089 - 44051228
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    ||||||||||||||||||||| ||   | |||| ||||||||||||||||||| | | ||||||| || |||||  |||| | | |||||  |||  |||    
T  44051089 tcctcggcagttaactaccgaggatttcctcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaatta 44051188  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||  ||||||||| ||||||| |||||||| |||||||||    
T  44051189 ctggtgtgcctcagccttatgcaatgtgtcaacaacaatt 44051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4786298 - 4786351
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||| |||||    
T  4786298 tgagagagcttctaccagatttgtagcagaagatcatcggcagttaacaaccga 4786351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 17139671 - 17139560
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||||  ||| ||||||| |||||| |||||| |||||    ||||||||| | |||  ||||||||||||| ||||||    
T  17139671 tcggcagttaactgcagccggttttt-tatttctcgacagttaactgccgagg-gacaatttcgtattttacatgtgtttctcaaccttatgatatgtgt 17139574  T
Q  163 cgacaacaattttc 176  Q
      ||||||||||||    
T  17139573 gaacaacaattttc 17139560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 24417433 - 24417490
Alignment:
Q  54 aagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactacc 111  Q
    |||||||| | | ||||||||||||||||||||||||||| ||||||| |||||||||    
T  24417433 aagaaaacctggacagttaactgcagccggtttttgaatttctcgacagttaactacc 24417490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 243309 - 243357
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  243309 tgagagagcttctgccagatttgtaacagaagatcctcgacagttaact 243357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6283431 - 6283479
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||| || ||||||| |||||||||||||||||||||||||    
T  6283431 tgagagagcttcggccagatttgaagcagaagatcctcggcagttaact 6283479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51429293 - 51429341
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  51429293 tgagagagcttcttccagatttgtagcagaagatcctcgacagttaact 51429341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 56304959 - 56304911
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  56304959 tgagagagcttctgccagatttgtagcagaaaatcctcggcaattaact 56304911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 173
Target Start/End: Complemental strand, 6280897 - 6280794
Alignment:
Q  70 ttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaac 169  Q
    ||||||||||||||||||| ||||| | |||| |||||| |||||  | |||||  |||  |||||  |||||| |||||||||| |||||||| |||||    
T  6280897 ttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaacgtaaattactcgtgtgccccaaccttatgcaatgtgtcaacaac 6280798  T
Q  170 aatt 173  Q
    ||||    
T  6280797 aatt 6280794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 9473658 - 9473732
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||| |||||||||||||||||     | |||| ||||||||||||||| ||| |||||||||||||||||||||    
T  9473658 tccttggcagttaactaccgaaattttcctcggtagttaactgcagccgatttatgaattcctcgacaattaact 9473732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 9890071 - 9889989
Alignment:
Q  33 atcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    |||||||||||||||||||||| |    | ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  9890071 atcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 9889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 37394295 - 37394197
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    |||||||||||||||| |||| |||  |||||||||||| |||||| |||| ||| |||||  ||||||||||  |||| | ||||| ||| |||||||    
T  37394295 tcggcagttaactgcatccggatttcaaattcctcgacagttaactgccgaagaggcaaaatcgtattttactagtgtggcacaaccatatcaaatgtg 37394197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 50278824 - 50278922
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    ||||||||||||||||||||| |||  ||||| |||||| ||||||  ||||| |||||||  |||  |||||  |||||| ||||||||| |||||||    
T  50278824 tcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaaacgtaaattactcgtgtgccacaaccttatcaaatgtg 50278922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 56304923 - 56304826
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    |||||| |||||||||||| | |||| |||||||||||| |||||| |||| | | ||||| |||||||||||  |||  ||||||||||| |||||||    
T  56304923 tcggcaattaactgcagccagatttttaattcctcgacagttaactgccgatg-ggcaaaaatgtattttactcgtgtttctcaaccttatcaaatgtg 56304826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 6178099 - 6178156
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    ||||||||||||||||||||||||||||| |    | |||||||||||||||||||||    
T  6178099 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 6178156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 6283467 - 6283573
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||||||||||  || || ||||||  |    ||||||||| ||||||||||  |||  ||||  | ||||||||||||    
T  6283467 tcggcagttaactgcagccggtttttgaattctgcggcagttaactttc----agacaaaagcgtattttactcgtgtttctcagtcatatgaaatgtgt 6283562  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  6283563 caacaacaatt 6283573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 15995798 - 15995717
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |    | ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  15995798 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagg 15995717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 19069263 - 19069182
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |    | ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  19069263 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagg 19069182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 48256652 - 48256701
Alignment:
Q  126 gtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
    ||||||||||| ||||||||| |||||||||||||||  |||||||||||    
T  48256652 gtattttacttgtgtgcctcagccttatgaaatgtgtgaacaacaatttt 48256701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 49094168 - 49094111
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    ||||||||||||||||||||||||||||| |    | |||||||||||||||||||||    
T  49094168 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 49094111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42885560 - 42885505
Alignment:
Q  1 tgagagagcttctgcgagattt--gtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||||||| ||||||  ||||||||||||| ||||||||||||| ||||    
T  42885560 tgagagagcttctgccagatttttgtagcagaagatcatcggcagttaactgccga 42885505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 28083990 - 28084033
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagc 80  Q
    |||||||||||||||||| |||| | ||||||||||||||||||    
T  28083990 tcggcagttaactaccgatgaaatcctcggcagttaactgcagc 28084033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 33051679 - 33051730
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgag 114  Q
    |||||||||||||||||||||||||  | |||||||||| |||| |||||||    
T  33051679 tcggcagttaactgcagccggttttctatttcctcgacacttaattaccgag 33051730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 8109438 - 8109340
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    |||||||||||||| |||||| | || |||||||||||| ||||||||| ||| |  ||||  ||||||||||  |||  |||| |||||| |||||||    
T  8109438 tcggcagttaactgtagccggatatttaattcctcgacagttaactaccaagggggtaaaatcgtattttactcgtgtttctcagccttatcaaatgtg 8109340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 3450104 - 3450153
Alignment:
Q  127 tattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    |||||||||| ||||||||| ||||||||||| |||| ||| ||||||||    
T  3450104 tattttacttgtgtgcctcagccttatgaaatatgtcaacagcaattttc 3450153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 37022101 - 37022064
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  37022101 gcagttaactaccgaggaaaacctcggcagttaactgc 37022064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 37865232 - 37865203
Alignment:
Q  20 tttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||||||||||||||||    
T  37865232 tttgtagcagaagatcctcggcagttaact 37865203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 9013869 - 9013917
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtt 85  Q
    ||||||||||||| |||| |||||| |||  ||||||||||||||||||    
T  9013869 tcggcagttaactgccgaggaaaacctcgatagttaactgcagccggtt 9013917  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 11084054 - 11084010
Alignment:
Q  33 atcctcggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||| |||||||||||| |||| |||||| |||||||||||||||    
T  11084054 atccacggcagttaactcccgaggaaaacctcggcagttaactgc 11084010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 17343401 - 17343473
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||| ||||    | |||| | ||||||||| ||||||| |||||||||||||| ||||||    
T  17343401 ctcggcagttaactacagaagttttcttcggtaattaactgcaaccggtttatgaattcctcgacagttaact 17343473  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 28081558 - 28081518
Alignment:
Q  10 ttctgcgagatttgtagcagaagatcctcggcagttaacta 50  Q
    |||||| ||||||||||||||||||||||| || |||||||    
T  28081558 ttctgccagatttgtagcagaagatcctcgacacttaacta 28081518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 40354635 - 40354675
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||| ||||||||||| |||| ||||||||||    
T  40354635 tcggcagttaactgccgaagaaaacctcggtagttaactgc 40354675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 49169094 - 49169146
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||||||||||| | |  | ||||||||||||||| ||||||||    
T  49169094 tcctcggcagttaactaccgaggtattcctcggcagttaactgccgccggttt 49169146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 50274807 - 50274755
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  50274807 tcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagg 50274755  T

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Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 36908679 - 36908512
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||||||| |||||||        | |||| |||||| |||||||||||||||||||||||||||||||| |||||    
T  36908679 tgagagagcttctgccagatttgtagcagaagctcctcgg--------tgccgaggaaaacctcggcagttaactgcagccggtttttgaattcttcgac 36908588  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    | |||||| |||||||| ||||| |||||||||||| ||||||||| |||||| ||||||||| ||| ||||||||    
T  36908587 agttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgtgtcaacatcaattttc 36908512  T

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Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42572721 - 42572806
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  42572721 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggaaaacctcgacagttaactgcagccggttt 42572806  T

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Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 49395712 - 49395628
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtt 85  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||    
T  49395712 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggaaaacctaggcagttaactgcagccggtt 49395628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 41804059 - 41804172
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||| |||||||||||||||||| || |||||| |||| | | |||||| ||||||||||| ||||||||| |||||| ||||||||    
T  41804059 tcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgtgcctcagccttataaaatgtgt 41804158  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  41804159 caacaacaattttc 41804172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 46973251 - 46973132
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||||||||||||| || |||||| || ||| | |||||  ||||||||||| |||| |||| ||| |||||||||||    
T  46973251 tcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttacttgtgtgtctcagcctaatgaaatgtgt 46973152  T
Q  163 cgacaacaattttcctcaag 182  Q
    | |||||||||||| |||||    
T  46973151 caacaacaattttcttcaag 46973132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 26633600 - 26633465
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    |||||||||||||||||| |    | |||||||||||||||| ||||||||||||||| |||  | |||   ||||||| | |||||| |||||||||||    
T  26633600 tcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagtta---accgagggggcaaaagcgtattttactt 26633504  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
     |||||||||||||||||||||||||| |||||||||||    
T  26633503 gtgtgcctcaaccttatgaaatgtgtcaacaacaatttt 26633465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 13173882 - 13173770
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||| |||||||||||||||||||||||||||  | || |||||| |||||| | |||||  ||||||||||| ||||||||| |||||||||||||||    
T  13173882 tcggctgttaactgcagccggtttttgaattcccag-cagttaactgccgagggggcaaaatagtattttacttgtgtgcctcagccttatgaaatgtgt 13173784  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  13173783 caacaacaattttc 13173770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13972171 - 13972001
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| | |||||| |    | ||||| ||||||||||||| |||||| ||||||||| |    
T  13972171 tgagagagcttctgccagatttgtagcagaagatcctcggctgtttaataccgaggttttcctcggctgttaactgcagccagttttt-aattcctcggc 13972073  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
     | ||||| |||| | | |||||  ||||||||||| |||  |||| |||||||||||||||| |||||||||    
T  13972072 -agtaactgccgaaggggcaaaaacgtattttacttgtgtttctcagccttatgaaatgtgtcaacaacaatt 13972001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 176
Target Start/End: Complemental strand, 38690007 - 38689866
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    ||||||||||||||||||||| |    | | ||||||||||||||||||||||  ||||||||||||| ||||||||||||| |  ||||| ||||||||    
T  38690007 tcctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttc-gaattcctcgacatttaactaccgagggggtaaaagcgtatttta 38689909  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    || ||||| | || | ||||| |||||||| ||||||||||||    
T  38689908 ctcatgtgacacagctttatgcaatgtgtcaacaacaattttc 38689866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 19054101 - 19053993
Alignment:
Q  68 agttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgaca 167  Q
    ||||||||||||||||||||||||||||||| || ||||||  ||||| | |||||  ||||||||||  |||  |||| |||||||||||||||| |||    
T  19054101 agttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgtcaaca 19054002  T
Q  168 acaattttc 176  Q
    |||||||||    
T  19054001 acaattttc 19053993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 46141855 - 46141719
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    |||||||||||||||||| |    | ||||||||||||||||||||||| |||||||||||| || |||||| |||||  | |||||  |||||||||||    
T  46141855 tcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattttactt 46141756  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
     ||| ||||| ||||||| ||| |||| |||||||||    
T  46141755 gtgtacctcagccttatgcaatatgtcaacaacaatt 46141719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 4516078 - 4515960
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaa-----ctaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaa 157  Q
    |||||||||||||||||||||||||||||||||||| || ||||     || |||||| |||||||  ||||||||||| ||||||||| ||| ||||||    
T  4516078 tcggcagttaactgcagccggtttttgaattcctcggcagttaactgccctgccgaggggacaaaatcgtattttacttgtgtgcctcaccctaatgaaa 4515979  T
Q  158 tgtgtcgacaacaattttc 176  Q
    |||||| | | ||||||||    
T  4515978 tgtgtcaaaagcaattttc 4515960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 35521654 - 35521548
Alignment:
Q  70 ttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaac 169  Q
    ||||||||||||||||||| | ||||||| || |||||| |||||  | |||||  ||||||||||| ||||||||| |||||| ||||||||| |||||    
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaac 35521555  T
Q  170 aattttc 176  Q
    |||||||    
T  35521554 aattttc 35521548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29763183 - 29763236
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29763183 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccga 29763236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 35527043 - 35527139
Alignment:
Q  67 cagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    ||||||||||||||| |||||||| ||| ||| ||||||||| || || || |||||  ||||||||||| ||||||||| ||||||||||||||||    
T  35527043 cagttaactgcagcctgtttttgatttcttcggcaattaactgccaagaaggcaaaaacgtattttacttgtgtgcctcagccttatgaaatgtgtc 35527139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 178
Target Start/End: Original strand, 21944414 - 21944521
Alignment:
Q  71 taactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaaca 170  Q
    |||||||||||||||||| |||| ||||||| ||| ||| ||||| || ||||  |||||||| ||||||| | || |||||||| ||||||| ||||||    
T  21944414 taactgcagccggtttttaaatttctcgacagttatctatcgaggggataaaaacgtattttatttatgtgtcccagccttatgatatgtgtcaacaaca 21944513  T
Q  171 attttcct 178  Q
    ||||||||    
T  21944514 attttcct 21944521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 36072442 - 36072304
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    |||||||||||||||||| |    | |||||||||||||||||||| ||||| |||| |||| ||  ||| |||||  || ||||||  |||||||| ||    
T  36072442 tcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttcaatttctcggcagctaattaccggaga-acaaaatcgtattttattt 36072344  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
     ||||||| |||||||||||||||||| ||||||||||||    
T  36072343 gtgtgccttaaccttatgaaatgtgtcaacaacaattttc 36072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 7966049 - 7965976
Alignment:
Q  103 ttaactaccgagga-gacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
    |||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  7966049 ttaactacagaggaagacaaaaatgtattttacttttgtgcctcaaccttatgaaatatgtcaacaacaatttt 7965976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 36076584 - 36076696
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||| | |  ||||  ||||||||||| |||  |||| |||||||||||||||    
T  36076584 tcggcagttaactgcagccggtttttgaattcctcggtggttaactaccgaaggggtaaaa-cgtattttacttgtgtttctcagccttatgaaatgtgt 36076682  T
Q  163 cgacaacaattttc 176  Q
    | ||| ||||||||    
T  36076683 caacagcaattttc 36076696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27487630 - 27487678
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27487630 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 27487678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 45943723 - 45943797
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||||||||||    | |||| |||||||| |||||||||| |||||||||||||||||||||    
T  45943723 tcctcggcagttaactaccgaagttttcctcggtagttaactacagccggtttatgaattcctcgacaattaact 45943797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 6437570 - 6437675
Alignment:
Q  68 agttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgaca 167  Q
    |||||||||||| || || |||| ||||||| || |||||| |||||  | |||||| ||||||||||| ||||||||| | ||||| |||||||| |||    
T  6437570 agttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtattttacttgtgtgcctcagctttatgcaatgtgtcaaca 6437669  T
Q  168 acaatt 173  Q
    ||||||    
T  6437670 acaatt 6437675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 15047358 - 15047277
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||  | ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  15047358 tcctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 15047277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 25040109 - 25040202
Alignment:
Q  70 ttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    ||||||| ||||||||||  |||| ||||||| |||||| |||| | ||||||| |||||||||||| ||||||||  | ||||||||||||||    
T  25040109 ttaactgaagccggttttaaaatttctcgacagttaactgccgaagggacaaaattgtattttacttgtgtgcctcggctttatgaaatgtgtc 25040202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 29261461 - 29261349
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||| |||||||| ||||  |||| ||| ||| |||||| |||||||| |||||  ||||||||||| ||||| ||  |||||||||| ||||    
T  29261461 tcggcagttaattgcagccgattttacaatttctctacagttaactgccgaggaggcaaaaacgtattttacttctgtgcatc-gccttatgaaacgtgt 29261363  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  29261362 caacaacaattttc 29261349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6434857 - 6434757
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||||||||||||||||||    | |  |||| |||||||||||| ||||| ||||| |||||    
T  6434857 tgagagtgcttctaccagatttgtagcagaagatccttggcagttaactaccgaagttttccttagcagataactgcagccgattttttaattcatcgac 6434758  T
Q  101 a 101  Q
    |    
T  6434757 a 6434757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 7981213 - 7981269
Alignment:
Q  120 aaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    |||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  7981213 aaaattgtattttacttgtgttcctcaaccttatgaaatgtgtcaacaacaattttc 7981269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14174875 - 14174923
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  14174875 tgagagagcttctgccagatttttagcagaagatcctcggcagttaact 14174923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 18975120 - 18975256
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    ||||||||||||||||||||    | || ||||||||||||| || ||| || |||||||||||| |||||  |||||| | |||||  |||||||||||    
T  18975120 tcggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattttactt 18975219  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
     ||| ||||| | ||||  |||||||| |||||||||    
T  18975220 gtgtacctcagctttatacaatgtgtcaacaacaatt 18975256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49927465 - 49927513
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  49927465 tgagagagcttctgccagatttgtagcagaagatcctcggtagttaact 49927513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 6562158 - 6562277
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    ||||||||||||||||||||| ||   | ||||||||||||||||||||| |||  ||||||||| || |||||| |||||| |  ||||  ||||||||    
T  6562158 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 6562257  T
Q  134 cttatgtgcctcaaccttat 153  Q
    ||  |||| | |||||||||    
T  6562258 ctagtgtggcacaaccttat 6562277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 36911696 - 36911803
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||| |||||| ||| || ||||||||||| ||| || |  ||| ||||||| ||||||  |||||||||||||  |||||| |||||||||||||||    
T  36911696 tcggcaattaactacagtcgatttttgaattcttcggcagt--actgccgaggaaacaaaaacgtattttacttatccgcctcagccttatgaaatgtgt 36911793  T
Q  163 cgacaacaat 172  Q
    | ||||||||    
T  36911794 caacaacaat 36911803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 49927539 - 49927649
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||  ||||||||||| ||||| ||| || |||||| |||||| |||||||  ||||||||||  |||  |||  || ||||||||||||    
T  49927539 tcggcagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttactcgtgtttctcggccatatgaaatgtgt 49927638  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  49927639 caacaacaatt 49927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 14172156 - 14172047
Alignment:
Q  68 agttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgaca 167  Q
    |||||| |||||||| ||||| ||| |||||  |  ||| | |||||| | |||||| ||||||||||| ||||| ||| ||||||| |||||||| |||    
T  14172156 agttaattgcagccgatttttaaatccctcggtagctaagtgccgagggggcaaaagcgtattttacttgtgtgcttcagccttatggaatgtgtcaaca 14172057  T
Q  168 acaattttcc 177  Q
    ||||||||||    
T  14172056 acaattttcc 14172047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 27115849 - 27115894
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||    
T  27115849 tcggcagttaactgcagccggtttttaaattcctcggcaattaact 27115894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 19495113 - 19495017
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||| ||||||||| || || | ||||||  ||||| | |||||||||||||||||  |||| |||| |||||||| ||||||    
T  19495113 tcggcagttaactgcagccggattttgaatttcttgatagttaactgtcgagg-ggcaaaagtgtattttact--tgtgtctcagccttatgacatgtgt 19495017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 49924929 - 49924793
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    ||||||||||||| |||| ||   | |||||||||||||| ||||||||||||||||  ||| || |||| | |||| | | |||||  |||  |||||     
T  49924929 tcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaattactc 49924830  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
     ||||||||| ||||||| |||||||| |||||||||    
T  49924829 gtgtgcctcagccttatgcaatgtgtcaacaacaatt 49924793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 3941147 - 3941230
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggag 117  Q
    |||||||||||||||||||||||    | |||| |||||||||||||| |||| ||||||||||| || |||||| | ||||||    
T  3941147 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccagtttatgaattcctcggcagttaactgcagaggag 3941230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26637220 - 26637259
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcgg 40  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  26637220 tgagagagcttctgccagatttgtagcagaagatcctcgg 26637259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29435081 - 29434975
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||| ||||||| | |||||||||| || |||||| ||||||||||||||| |    |||||| |||||||||||| ||||| |||||||| ||||     
T  29435081 tgagagaacttctgccaaatttgtagcaaaa-atcctctgcagttaactaccgaggttgtcatcggaagttaactgcagtcggttattgaattcttcgaa 29434983  T
Q  101 aattaact 108  Q
    | ||||||    
T  29434982 agttaact 29434975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 14174911 - 14174949
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgaca 101  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  14174911 tcggcagttaactgcagccgatttttgaattcctcgaca 14174949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 27485106 - 27485008
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    ||||||||||||||||||||| |||| ||||||| | || |||||| |||||| | |||||  ||||||||||  |||  |||| |||||| |||||||    
T  27485106 tcggcagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaatgtg 27485008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 49426787 - 49426750
Alignment:
Q  10 ttctgcgagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||| |||||||||||||||||||||||||||||||    
T  49426787 ttctgccagatttgtagcagaagatcctcggcagttaa 49426750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 3940030 - 3939958
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaa 106  Q
    |||||||||||||||||||||||     ||||| | ||||||||||||| ||| ||||||| |||||||||||    
T  3940030 tcctcggcagttaactaccgaagtttttatcggtaattaactgcagccgatttatgaattcttcgacaattaa 3939958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 173
Target Start/End: Original strand, 8460125 - 8460232
Alignment:
Q  65 ggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcg 164  Q
    |||||||||||||||||| |||   |||||||||    ||||||||||||| |||||||  |||| ||||| |||||||||| ||||||  ||||||||     
T  8460125 ggcagttaactgcagccgatttca-aattcctcggttgttaactaccgaggggacaaaaacgtatattactcatgtgcctcagccttatagaatgtgtca 8460223  T
Q  165 acaacaatt 173  Q
    ||| |||||    
T  8460224 acagcaatt 8460232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 30910029 - 30910081
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||  |||||||||||| |||||| ||||||    
T  30910029 tcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagg 30910081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 41453885 - 41453833
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||  ||||||||| || |||||||||||||    
T  41453885 tcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgagg 41453833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51269047 - 51269003
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagtt 45  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||    
T  51269047 tgagagagcttctgctaaatttgtagcagaagatcctcggtagtt 51269003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 51337532 - 51337584
Alignment:
Q  56 gaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||| ||||| |||||||||||||||||||||| ||||||||| || ||||||    
T  51337532 gaaatcatcgacagttaactgcagccggttttttaattcctcggcagttaact 51337584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 18609937 - 18609898
Alignment:
Q  38 cggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  18609937 cggcagttaactaccgaggaaaacttcggcagttaactgc 18609898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 51666668 - 51666778
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcga 165  Q
    |||||||||||||||| | ||| ||||| |||| || |||||| |||||| | |||||| ||||||||||  |||| | || | ||||| |||||||| |    
T  51666668 gcagttaactgcagcc-gatttcgaattactcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagctttatgcaatgtgtcaa 51666766  T
Q  166 caacaattttcc 177  Q
    || |||||||||    
T  51666767 catcaattttcc 51666778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 19159707 - 19159645
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttttt 88  Q
    ||||||||||||||||||||||||||||| |    | | ||||||||||||||||||| ||||    
T  19159707 gcagaagatcctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttt 19159645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 23276134 - 23276244
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||| |||||| |||| ||||||||  || |||||| |||||| | |||||  ||||||||||  |||  |||| |||||| ||||| ||    
T  23276134 tcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaatgcgt 23276233  T
Q  163 cgacaacaatt 173  Q
      |||||||||    
T  23276234 gaacaacaatt 23276244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 23359346 - 23359436
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaag 124  Q
    |||||||||||| |||||||| |    | |||| |||||||||||||||| |||  ||||||||| ||||||||| |||||| | ||||||    
T  23359346 tcctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgagggggcaaaag 23359436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 29352306 - 29352256
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    |||||||||||||| |||||| |||  ||||||||||||||||||| ||||    
T  29352306 tcggcagttaactggagccggatttcaaattcctcgacaattaactgccga 29352256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 29424456 - 29424402
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttttt 88  Q
    |||||||||||||||||||||||    | |||| |||||||||||||||||||||    
T  29424456 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttt 29424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 38119653 - 38119607
Alignment:
Q  38 cggcagttaactaccgaagaaaacatcggcagttaactgcagccggt 84  Q
    |||||||||||| |||| |||||| |||| |||||||||||||||||    
T  38119653 cggcagttaactgccgaggaaaacctcggtagttaactgcagccggt 38119607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 42570123 - 42570077
Alignment:
Q  129 ttttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
    |||||||| ||||||||| |||||||||| ||||| |||||||||||    
T  42570123 ttttacttgtgtgcctcagccttatgaaacgtgtcaacaacaatttt 42570077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 1656190 - 1656223
Alignment:
Q  143 ctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||||||||||||||||||||| ||||||||||||    
T  1656190 ctcaaccttatgaaatgtgtcaacaacaattttc 1656223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 6562907 - 6562870
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  6562907 gcagttaactaccgaagaaaacctcgacagttaactgc 6562870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 16270065 - 16270028
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  16270065 gcagttaactgccgaagaaaacctcggcagttaactgc 16270028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 44470008 - 44470089
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    |||||||||||||||| |||| |    | ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  44470008 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 44470089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 45330928 - 45330855
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaacta 109  Q
    |||||||||| |||| |||| ||||| |||| ||||||||||||| |||||     ||||||||||||||||||    
T  45330928 ctcggcagtttactatcgaaaaaaacctcggtagttaactgcagctggtttcgtgtttcctcgacaattaacta 45330855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 1654810 - 1654750
Alignment:
Q  103 ttaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    |||||| |||||  || |||| ||||||| |||| ||||||||| ||||||||||||||||    
T  1654810 ttaactgccgagaggataaaattgtatttcacttttgtgcctcagccttatgaaatgtgtc 1654750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4208490 - 4208454
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcct 37  Q
    ||||||||||||||  |||||||||||||||||||||    
T  4208490 tgagagagcttctggtagatttgtagcagaagatcct 4208454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 20353932 - 20353984
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    |||||||||||||||||||||||    | ||||||||||||||| ||||||||    
T  20353932 tcctcggcagttaactaccgaagttttcctcggcagttaactgccgccggttt 20353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 26606832 - 26606868
Alignment:
Q  41 cagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||||||||||||| |||||| |||||||||||||||    
T  26606832 cagttaactaccgaggaaaacttcggcagttaactgc 26606868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 30905818 - 30905746
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    ||||||||||||||||||||| |||  |||| |||| || |||||| |||||| || ||||  ||||||||||    
T  30905818 tcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgaggggataaaatcgtattttact 30905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 31945858 - 31945910
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||||||||||| |||  | |||| |||||||||| ||||||||    
T  31945858 tcctcggcagttaactaccgaggaattcctcggtagttaactgccgccggttt 31945910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 41459251 - 41459215
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactg 76  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  41459251 gcagttaactaccgaggaaaacctcggcagttaactg 41459215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44596944 - 44596896
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||| |||||| | |||||||||||||||| ||| ||||||||||    
T  44596944 tgagagagtttctgccaaatttgtagcagaagatactcagcagttaact 44596896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 47652722 - 47652762
Alignment:
Q  35 cctcggcagttaactaccgaagaaaacatcggcagttaact 75  Q
    ||||||||||||||| |||| |||||| |||||||||||||    
T  47652722 cctcggcagttaactgccgaggaaaacttcggcagttaact 47652762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 49502839 - 49502799
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  49502839 tcggcagttaactaccgaggaaaacttcagcagttaactgc 49502799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 50269130 - 50269182
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||| |||||||    |||||||||| |||||||||||||    
T  50269130 tcggcagttaactgcagtcggttttctttttcctcgacacttaactaccgagg 50269182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 5e-41; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 18538334 - 18538475
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    |||||||||||||||||||||    | |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||  ||||||||||    
T  18538334 ctcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttact 18538433  T
Q  136 tatgtgcctcaaccttatgaaatgtgtcgacaacaattttcc 177  Q
    | ||||||||| ||| |||||||||||| |||||||||||||    
T  18538434 tgtgtgcctcagcctaatgaaatgtgtcaacaacaattttcc 18538475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 20192462 - 20192290
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||    | |||||||||||||||||||| || |||||||| ||  |    
T  20192462 tgagagagcttctgccagatttgtagcagaagatcctcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttcagc 20192363  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | ||||||  ||| | | |||||  ||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  20192362 agttaactgacgaaggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaatt 20192290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 18310047 - 18310157
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||| | |||||| |||||  ||||||||||| ||||||||| ||||||| |||||||    
T  18310047 tcggcagttaactgcagtcggttattgaattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgt 18310146  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  18310147 caacaacaatt 18310157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 34682304 - 34682190
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  | |||   |||||| ||||||||||| ||  ||||| |||||||||||||||    
T  34682304 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttacttgtgaacctcagccttatgaaatgtgt 34682205  T
Q  163 cgacaacaattttcc 177  Q
    | |||||||||||||    
T  34682204 caacaacaattttcc 34682190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 18307363 - 18307251
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||| |    | ||||||||||||| |||||| ||||| |||||||||||    
T  18307363 tgagagggcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgac 18307264  T
Q  101 aattaactaccga 113  Q
    | |||||| ||||    
T  18307263 agttaactgccga 18307251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 35564370 - 35564286
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtt 85  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||| ||||    
T  35564370 tgagagagcttatgccagatttgtagcagaagatcctcagcagttaactaccgaggaaaacctcggcaattaactgcagctggtt 35564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25497620 - 25497517
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||||      | |||||||||||||||||||  |||||||||||||||||    
T  25497620 tgagagagcttctgcctgatttgtagcagaagattctcggcagttaactaccgagattttcctcggcagttaactgcagccaatttttgaattcctcgac 25497521  T
Q  101 aatt 104  Q
    ||||    
T  25497520 aatt 25497517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 41201775 - 41201672
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |  ||||  |||||||  ||||||||||  ||||||||| ||||||| |||||||    
T  41201775 tcggcagttaactgcagccggttattgaattcctcgacaattaattgtcgagaggacaaaatcgtattttactcgtgtgcctcagccttatgtaatgtgt 41201676  T
Q  163 cgac 166  Q
    ||||    
T  41201675 cgac 41201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 542754 - 542866
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||      | |||||||||| |||||||||| |||  |||||||||||    
T  542754 tgagagaacttctgccagatttgtagcagaagatcctcggcagttaactaccgagagtttcctcggcagttagctgcagccggatttctaattcctcgac 542853  T
Q  101 aattaactaccga 113  Q
    | |||||| ||||    
T  542854 agttaactgccga 542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 1398645 - 1398538
Alignment:
Q  69 gttaactgcagccggtttttgaattcctcgacaattaactaccga-ggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgaca 167  Q
    |||||||||| |||||| |||||||||||| || ||||||  ||| |||| |||||||||||||||||| |||| |||||||||||| |||||||| |||    
T  1398645 gttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggag-caaaagtgtattttacttctgtgtctcaaccttatgtaatgtgtcaaca 1398547  T
Q  168 acaattttc 176  Q
    |||||||||    
T  1398546 acaattttc 1398538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 25499913 - 25500028
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgt--gcctcaaccttatgaaatgt 160  Q
    |||||||||||| ||| |||||||||||||||||||| | |||||| |||||| | |||||| ||||||||||| |||  |||||| ||||||| |||||    
T  25499913 tcggcagttaaccgcaaccggtttttgaattcctcgatagttaactgccgagggggcaaaagcgtattttacttgtgttcgcctcagccttatgtaatgt 25500012  T
Q  161 gtcgacaacaattttc 176  Q
    ||| ||| ||||||||    
T  25500013 gtcaacaccaattttc 25500028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 176
Target Start/End: Original strand, 33995145 - 33995287
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||||||||||||||| |||| |    | ||||||||||| |||| ||| |||||||||| |||| || ||||||  ||||| || |||| |||||||||    
T  33995145 tcctcggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggggataaaattgtatttta 33995244  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||| |||||||||||||||| |||| |||| ||||||| ||||    
T  33995245 cttgtgtgcctcaaccttataaaatatgtcaacaacaactttc 33995287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 24053227 - 24053114
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||| ||||||||||||| |||| || |||||| |||||   ||||||  |||||||| ||||||| ||| ||||||| | ||||||    
T  24053227 tcggcagttaactgcagacggtttttgaattactcggcatttaactgccgagagaacaaaaacgtattttatttatgtgtctcgaccttatcatatgtgt 24053128  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  24053127 caacaacaattttc 24053114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 3603148 - 3603284
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttactt 136  Q
    |||||||||||||||||| |    | |||| |||||||||||||| ||| |||||||| ||| || ||||||  |||||   |||||  |||||||||||    
T  3603148 tcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattttactt 3603247  T
Q  137 atgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    |||||||||| ||||||| |||||||| |||||||||    
T  3603248 atgtgcctcagccttatgcaatgtgtcaacaacaatt 3603284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 3600430 - 3600273
Alignment:
Q  17 agatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttg-aattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||||||| |||||||| ||| |    | | |||||||||||||||| |||| ||  ||||  ||| || |||||| ||||||    
T  3600430 agatttgtagcagaagatcctcggctgttaactatcgaggttttccttggcagttaactgcagctggttattataattattcggcagttaactgccgagg 3600331  T
Q  116 agacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
     | |||||   |||||||||| |||| |||||| |||||||||||||| |||||||||    
T  3600330 gggcaaaaacatattttacttgtgtggctcaactttatgaaatgtgtcaacaacaatt 3600273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 20200174 - 20200284
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||  |||| ||||||| || |||| |||||| |||| | | |||||  |||||||| || ||||||||| ||||||| |||||||    
T  20200174 tcggcagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttatttgtgtgcctcagccttatgcaatgtgt 20200273  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  20200274 caacaacaatt 20200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 19228672 - 19228785
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||| ||||||||| ||||| ||| || |||||| |||||| | ||     ||||||||||| |||| |||| |||||| ||||||||    
T  19228672 tcggcagttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagccttatcaaatgtgt 19228771  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  19228772 caacaacaattttc 19228785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 33993326 - 33993214
Alignment:
Q  64 cggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    |||||||||||| |||||||||||||||||  ||| || |||||| |||||| | |||||  ||||||||||  | |  |||||||||||||||||||||    
T  33993326 cggcagttaactacagccggtttttgaatttttcggcagttaacttccgagggggcaaaaacgtattttactcgtatttctcaaccttatgaaatgtgtc 33993227  T
Q  164 gacaacaattttc 176  Q
     | | ||||||||    
T  33993226 aaaagcaattttc 33993214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42865768 - 42865816
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  42865768 tgagagagcttctgccagatttgtagcagaagatcctcggcaattaact 42865816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 25877697 - 25877559
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||||||||||||||||||||||    | ||||||||||| ||||||||| ||| |||||||||| || |||| | |||| | |  ||||  ||||||||    
T  25877697 tcctcggcagttaactaccgaagttttcctcggcagttaattgcagccgg-tttcgaattcctcggcatttaattgccgaagtggtaaaaacgtatttta 25877599  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||  |||| | |||||||||| |||||||| |||||||||    
T  25877598 ctcgtgtgacacaaccttatgcaatgtgtcaacaacaatt 25877559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 1397374 - 1397488
Alignment:
Q  61 catcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgt 160  Q
    ||||||||||||||||||||||| |||  ||||||||  || |||||| |||||| | ||||| ||||  |||||  |||||| ||||||||| ||||||    
T  1397374 catcggcagttaactgcagccggatttctaattcctcagcagttaactgccgagggggcaaaaatgtaaattactcgtgtgccacaaccttatcaaatgt 1397473  T
Q  161 gtcgacaacaatttt 175  Q
    |   |||||||||||    
T  1397474 gggaacaacaatttt 1397488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 11346107 - 11346037
Alignment:
Q  10 ttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagc 80  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| |    | ||||||||||||||||||    
T  11346107 ttctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgcagc 11346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 176
Target Start/End: Complemental strand, 34122600 - 34122458
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||||||||||||||||||||      | ||||||||||||||||||||| |||  ||||||||| || |||||| |||| | | |||||  ||||||||    
T  34122600 tcctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtatttta 34122501  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    || ||||| | ||||||||| |||| ||   ||||||||||||    
T  34122500 ctaatgtggcacaaccttatcaaatatgggaacaacaattttc 34122458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 34123933 - 34124059
Alignment:
Q  35 cctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttac 134  Q
    |||||||||||||||||||| |    | | ||||||||||||||||||| |||  |||| ||||||| |||||| |||||| | |||||  |||||||||    
T  34123933 cctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttac 34124032  T
Q  135 ttatgtgcctcaaccttatgaaatgtg 161  Q
    |  |||| | ||||||||| |||||||    
T  34124033 tggtgtggcacaaccttattaaatgtg 34124059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 7800984 - 7801073
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaa 123  Q
    ||||| ||||||||||||||| ||   | |||| | ||||||||||||| |||||||||||| ||||| ||||||||||||  |||||||    
T  7800984 tcctcagcagttaactaccgatgatttcctcggtaattaactgcagccgatttttgaattccacgacagttaactaccgagtggacaaaa 7801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 17965925 - 17965824
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    ||||||||| ||||||||||| |    | ||||||||||||||||| ||  |||| ||||||||||||||||||| |||||| || ||||  ||||||||    
T  17965925 tcctcggcaattaactaccgatgttttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgaggggataaaatcgtatttta 17965826  T
Q  134 ct 135  Q
    ||    
T  17965825 ct 17965824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 31094609 - 31094500
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||   | |||| ||||| ||||||||||||| | ||||| ||||  |||||  ||||||| | ||||||| ||||| |    
T  31094609 tcggcagttaactgcagccggtttca-atttccccgacagttaactaccgagggggcaaaaatgtaaattactcgtgtgcctaagccttatgcaatgtat 31094511  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  31094510 caacaacaatt 31094500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 8537258 - 8537221
Alignment:
Q  17 agatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  8537258 agatttgtagcagaacatcctcggcagttaactaccga 8537221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 19037459 - 19037516
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    ||||||||||||||||||||||||||||| |    | |||||||||||||||||||||    
T  19037459 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 19037516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 38968142 - 38968045
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgt 160  Q
    ||||||||||||||||||||| ||||  ||||||||  | ||||||||||| |   |||||  |||||||||||||||   ||| |||||||||||||    
T  38968142 tcggcagttaactgcagccggattttttattcctcggtagttaactaccgaaggatcaaaaacgtattttacttatgtttttcagccttatgaaatgt 38968045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 1401428 - 1401484
Alignment:
Q  120 aaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||||| ||||||||||| |||| |||| |||||||||||||||| |||||| |||||    
T  1401428 aaaagcgtattttacttgtgtgtctcagccttatgaaatgtgtcaacaacagttttc 1401484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 38971624 - 38971672
Alignment:
Q  38 cggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||  ||| |||||| ||||||||||||||||||||||||    
T  38971624 cggcagttaactgtcgaggaaaacttcggcagttaactgcagccggttt 38971672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 13707971 - 13707936
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaact 75  Q
    ||||||||||||||| ||||||||||||||||||||    
T  13707971 gcagttaactaccgaggaaaacatcggcagttaact 13707936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 24050071 - 24050036
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcgaca 101  Q
    |||||||| |||||||||||||||||||||||||||    
T  24050071 gcagttaagtgcagccggtttttgaattcctcgaca 24050036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 42912920 - 42912881
Alignment:
Q  38 cggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  42912920 cggcagttaactaccgaggaaaacttcggcagttaactgc 42912881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 6268067 - 6267997
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccg-gtttttgaattcctcgacaattaa 106  Q
    |||||| | |||| |||| | |||| ||||||||||||||||||||  ||||||||||||||| |||||||    
T  6268067 tcggcaataaactgccgatggaaacttcggcagttaactgcagccgattttttgaattcctcggcaattaa 6267997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 13568101 - 13568151
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    ||||||||||||||||||||| |||  ||||||||| || |||||||||||    
T  13568101 tcggcagttaactgcagccggatttcaaattcctcggcagttaactaccga 13568151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 35567058 - 35567167
Alignment:
Q  68 agttaactgcagccggtttttgaattcctcgacaattaactaccgaggaga-caaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgac 166  Q
    ||||||||||| ||||| ||   ||||||||||| |||||| ||||| ||| |||||   |||||||||| ||||||||| ||| |||||||||||| ||    
T  35567058 agttaactgcaaccggtattaacattcctcgacagttaactgccgag-agagcaaaaacatattttacttgtgtgcctcagcctgatgaaatgtgtcaac 35567156  T
Q  167 aacaattttcc 177  Q
      |||||||||    
T  35567157 ggcaattttcc 35567167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 13838464 - 13838427
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  13838464 gcagttaactaccgaggaaaacctcggcagttaactgc 13838427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 20421947 - 20421984
Alignment:
Q  38 cggcagttaactaccgaagaaaacatcggcagttaact 75  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  20421947 cggcagttaactaccgaggaaaacttcggcagttaact 20421984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 2532505 - 2532552
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtt 85  Q
    ||||||||||||| ||||||||| | |||| ||||||||||||||||||    
T  2532505 tcggcagttaactgccgaagaaa-cttcgggagttaactgcagccggtt 2532552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 8577004 - 8577044
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||| ||||||||||| |||| ||||||||||    
T  8577004 tcggcagttaactgccgaagaaaacctcggtagttaactgc 8577044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 25983397 - 25983437
Alignment:
Q  35 cctcggcagttaactaccgaagaaaacatcggcagttaact 75  Q
    |||| ||||||||||||||| ||||||||||| ||||||||    
T  25983397 cctctgcagttaactaccgaggaaaacatcggtagttaact 25983437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 42682103 - 42681931
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||| |    | |||||||||||||||||| |||||||||||| ||| ||    
T  42682103 tgagagaacttatgctagatttgtagcagaagatcctcggcagttaattaccgaggttttcctcggcagttaactgcagctggtttttgaatttctcaac 42682004  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
      ||||||||||||||||||||| || ||||||||||||||||||| |||||| |||| |||| | |||||||    
T  42682003 cgttaactaccgaggagacaaaaatgcattttacttatgtgcctcagccttataaaatatgtcaagaacaatt 42681931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 30355203 - 30355375
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    | |||||||||||||||||||| ||||||||||| ||  |    
T  30355203 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcagc 30355302  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    |||||||| |||||| | |||||| ||||||||||  |||  ||||  | ||||||||||||| |||||||||    
T  30355303 aattaactgccgagggggcaaaagcgtattttactcgtgtttctcagtcatatgaaatgtgtcaacaacaatt 30355375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 41047886 - 41047715
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||    | ||||||||||||| || ||| || || ||||| ||  |    
T  41047886 tgagagagcttcctccagatttgtagcagaagatcctcggcagttaactaccgaagttttcctcggcagttaactacacccgattattaaattcttctgc 41047787  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | |||||||||||| || ||||| ||||||||| ||||||||| ||  |||||| |||||||| |||||||||    
T  41047786 agttaactaccgagaag-caaaaatgtattttatttatgtgccgcagtcttatgcaatgtgtcaacaacaatt 41047715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 41049215 - 41049324
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||| || |||||||| |||||| ||||||||||| || ||||||| ||||||||||||||||| ||| ||||||| |||||||    
T  41049215 tcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaaga-acaaaagcgtattttacttatgtgcatcagccttatgcaatgtgt 41049313  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  41049314 caacaacaatt 41049324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 48314720 - 48314611
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||| |||||||||||||||||| |||||||||||| || |||||| |||||| | ||||| |||||||||||| ||| ||||||||||||| |||||||    
T  48314720 tcggtagttaactgcagccggttattgaattcctcggcagttaactgccgagggg-caaaaatgtattttacttgtgtacctcaaccttatgcaatgtgt 48314622  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  48314621 caacaacaatt 48314611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 9494832 - 9494945
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||| ||||||||| || |||||| |||||| | || |    |||||||||| ||||||||| |||||||||||||||    
T  9494832 tcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttacttgtgtgcctcagccttatgaaatgtgt 9494931  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  9494932 caacaacaattttc 9494945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 46863312 - 46863480
Alignment:
Q  5 agagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaatt 104  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| ||      | |  ||||||||||||||||||||||| |||| |||| || ||    
T  46863312 agagcttctgccagatttgtagcagaagatcttcggcagttaactacagagattttcgttcgcagttaactgcagccggtttttcaatttctcggcagtt 46863411  T
Q  105 aactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    |||| |||| | | |||||  ||||||||||| |||| |||| ||||||| |||| ||| |||||||||    
T  46863412 aactgccgatggggcaaaaacgtattttacttgtgtgtctcagccttatgcaatgcgtcaacaacaatt 46863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 46860553 - 46860458
Alignment:
Q  68 agttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    |||||||||||| |||||||| |||||||||||| |||||| |||||| | |||||| ||||||||||| ||||||||| ||||||| ||||||||    
T  46860553 agttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgtaatgtgtc 46860458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 21185666 - 21185556
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||| ||||||||| |||||||| ||| || |||||| |||||||| |||||  |||||||||||||||| |||| | ||||| |||||||    
T  21185666 tcggcagttaactacagccggttattgaattcttcggcagttaactgccgaggaggcaaaatcgtattttacttatgtgtctcatcattatgcaatgtgt 21185567  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  21185566 caacaacaatt 21185556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 37340349 - 37340239
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||  ||| |||||||||  |||||||| |||||||||| |  |||||| |||||||    
T  37340349 tcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttatttatgtgccttagtcttatgtaatgtgt 37340250  T
Q  163 cgacaacaatt 173  Q
    | ||| |||||    
T  37340249 caacatcaatt 37340239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28980136 - 28980309
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaag-aaaacatcggcagttaactgcagccggtttttgaattcctcga 99  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |     | |||||||||||||||| |||| | |||||||| |||     
T  28980136 tgagagagcttctgtcagatttgtagcagaaaatcctcggcagttaactaccgaggttttccttcggcagttaactgcatccggatattgaattcttcgg 28980235  T
Q  100 caattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||  ||||| | |||| | |||||  ||||||||||  |||| |||| ||||||| |||||||| |||||||||    
T  28980236 cagctaactgctgagggggcaaaaacgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaatt 28980309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36394902 - 36395009
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |    | |||||| |||| ||||| |||||| ||||||| ||| |    
T  36394902 tgagagagcttctgccagatttgtagcagaagatcctcggtagttaactaccgaggttttcctcggcacttaattgcagtcggtttgtgaattcttcggc 36395001  T
Q  101 aattaact 108  Q
    ||||||||    
T  36395002 aattaact 36395009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 47061000 - 47060864
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    ||||||||||||||||||| |    | ||||||||||||| |||||| |||| ||||||||||||| |||||| |||||| | |||||  ||||||||||    
T  47061000 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgatttt-gaattcctcgacagttaactgccgagggggcaaaaacgtattttact 47060902  T
Q  136 tatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | | ||||||| ||||||||||| |||| |||| ||||    
T  47060901 tgtatgcctcagccttatgaaatatgtcaacaataatt 47060864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 281
Target Start/End: Original strand, 4952467 - 4952539
Alignment:
Q  210 ttatagcgaagaactcacgattgaggttccaaccaatgaaagcagctgctggccac-aaacatgggggtcagg 281  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||| ||||||||||||||||    
T  4952467 ttatagcgaagaactcacgattgagattccaaccaataaaagcggttgctggccacaaaacatgggggtcagg 4952539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 19044369 - 19044231
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||||||||||||||||||||||    | |||||| |||||||||| ||| |||  ||||||||| ||||||||| |||||   ||||||  ||||||||    
T  19044369 tcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcgg-tttcaaattcctcggcaattaactgccgagtgaacaaaaacgtatttta 19044271  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    || |||||||||| ||||||| |||||||| |||| ||||    
T  19044270 ctcatgtgcctcagccttatgcaatgtgtcaacaataatt 19044231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 20710267 - 20710405
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||||||||||||||||||||||    | |||||| |||||||||| ||| |||  ||||||||| ||||||||| |||||   ||||||  ||||||||    
T  20710267 tcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcgg-tttcaaattcctcggcaattaactgccgagtgaacaaaaacgtatttta 20710365  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    || |||||||||| ||||||| |||||||| |||| ||||    
T  20710366 ctcatgtgcctcagccttatgcaatgtgtcaacaataatt 20710405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 36186499 - 36186612
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||| |||||||  |||||||||| || |||||| |||||| | |||||| ||||||||||  |||| | || ||||||| |||||||    
T  36186499 tcggcagttaactgcaaccggtttc-gaattcctcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagccttatgcaatgtgt 36186597  T
Q  163 cgacaacaattttcc 177  Q
    | |||||||||||||    
T  36186598 caacaacaattttcc 36186612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 36392172 - 36392062
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||| ||| ||| |||||||||||||| ||| ||||||  ||||| | |||||  ||||||||||| ||||||| | ||||||| |||||||    
T  36392172 tcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtgtgcctaagccttatgtaatgtgt 36392073  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  36392072 caacaacaatt 36392062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 10705295 - 10705182
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||| ||||| |||| |||| || |||||| || ||| |  |||| |||||||||||| ||||||| | ||||||||||| |||    
T  10705295 tcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtattttacttgtgtgccttagccttatgaaatatgt 10705196  T
Q  163 cgacaacaattttc 176  Q
    | | ||||||||||    
T  10705195 caataacaattttc 10705182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21188390 - 21188438
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21188390 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 21188438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 28112856 - 28112776
Alignment:
Q  96 tcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    |||||| |||||| |||||  | |||||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  28112856 tcgacagttaactgccgagagggcaaaagcgtattttacttgtgtgtctcaaccttatgaaatgtgtcaacaacaattttc 28112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 27453620 - 27453730
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||| |||| ||||||||| || |||||| |||||| | ||||   |||||||||||||||  || | |||||| ||||||||    
T  27453620 tcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgtttctaagccttatcaaatgtgt 27453719  T
Q  163 cgacaacaatt 173  Q
      |||||||||    
T  27453720 gaacaacaatt 27453730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 10225869 - 10225983
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatg-aaatgtg 161  Q
    |||| |||||||| ||| |  |||||| |||| |||||| ||||||  ||||||| |||||   |||||||||||||||| ||| ||||||| |||||||    
T  10225869 tcggtagttaacttcagtcaatttttgcattcatcgacagttaactgtcgaggaggcaaaaacatattttacttatgtgcttcagccttatgaaaatgtg 10225968  T
Q  162 tcgacaacaattttc 176  Q
    || ||||||||||||    
T  10225969 tcaacaacaattttc 10225983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 21188426 - 21188471
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  21188426 tcggcagttaactgcagccggtttttgaattcctcggcagttaact 21188471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 11629803 - 11629743
Alignment:
Q  38 cggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcg 98  Q
    ||||||||||||  ||| |||||| ||||||||||||||||||||| |||| |||||||||    
T  11629803 cggcagttaactgtcgaggaaaacctcggcagttaactgcagccggatttttaattcctcg 11629743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28115496 - 28115551
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaag 56  Q
    ||||||||||| ||| ||||||||||||||||| ||||  ||||||||||||||||    
T  28115496 tgagagagcttatgctagatttgtagcagaagaccctcaacagttaactaccgaag 28115551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 39460597 - 39460490
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcga 165  Q
    |||||||||||||||||| |||| ||||||||| |||| |||| |||||  || ||||  ||||||||||  |||  ||||||||||| |||||| |  |    
T  39460597 gcagttaactgcagccggatttttaattcctcggcaatcaactgccgagaggataaaatcgtattttactcgtgtttctcaaccttatcaaatgtataaa 39460498  T
Q  166 caacaatt 173  Q
    ||||||||    
T  39460497 caacaatt 39460490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 34139978 - 34139932
Alignment:
Q  3 agagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  34139978 agagagcttctgccagatttgtagaggaagatcctcggcagttaact 34139932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 40166787 - 40166837
Alignment:
Q  64 cggcagttaactgcagccggtttttgaattcctcgacaattaactaccgag 114  Q
    |||||||||||||||| |||||| |||||||||||||| |||||| |||||    
T  40166787 cggcagttaactgcagtcggtttctgaattcctcgacagttaactgccgag 40166837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 4952559 - 4952592
Alignment:
Q  302 atgaatcctatggctattaacttgccagcaatgt 335  Q
    ||||||||||||||||||||||||||||||||||    
T  4952559 atgaatcctatggctattaacttgccagcaatgt 4952592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 40142687 - 40142732
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||    
T  40142687 tcggtagttaactgcaaccggtttatgaattcctcgacaattaact 40142732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 17838750 - 17838710
Alignment:
Q  10 ttctgcgagatttgtagcagaagatcctcggcagttaacta 50  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  17838750 ttctgccagatttgtagcagaagatcgtcggcagttaacta 17838710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 34623406 - 34623522
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||| | | | ||||||||| || |||||| |||| ||| |||||  |||  |||||  |||| |||||||||||| ||| |||    
T  34623406 tcggcagttaactgcagccgatctcttaattcctcggcagttaactgccgatgaggcaaaaacgtaaattactcgtgtgtctcaaccttatgcaatatgt 34623505  T
Q  163 cgacaacaattttcctc 179  Q
    | ||| ||||| |||||    
T  34623506 caacagcaattctcctc 34623522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 45361696 - 45361644
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||| ||||||||| || |||||| ||||||    
T  45361696 tcggcagttaactgcagccggatttttaattcctcgtcagttaactgccgagg 45361644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 34622575 - 34622436
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||| ||| |||||||||||| ||   | ||| ||||||||||||| |||||| | ||||||||  || ||||||  | ||| | |||||  |||  |||    
T  34622575 tccttggctgttaactaccgaggatttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaatta 34622476  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||| ||||||||| ||||||| |||||||| |||||||||    
T  34622475 cttgtgtgcctcagccttatgcaatgtgtcaacaacaatt 34622436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 41623904 - 41623951
Alignment:
Q  126 gtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||||||||||| ||||||||||||||||| |||||||| ||| |||||    
T  41623904 gtattttacttgtgtgcctcaaccttatgtaatgtgtcaacagcaatt 41623951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 11100536 - 11100586
Alignment:
Q  126 gtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||||||||| | |||||||| ||||||| ||||||||| ||||||||||||    
T  11100536 gtattttacatgtgtgcctcgaccttataaaatgtgtcaacaacaattttc 11100586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 29593354 - 29593452
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    |||||||||||||||||||||  ||  ||||||||| || ||||||  ||||| |  |||| |||||||||||  |||| | ||||||||| |||||||    
T  29593354 tcggcagttaactgcagccggaattcaaattcctcggcagttaactgtcgagggggtaaaattgtattttactagtgtggcacaaccttatcaaatgtg 29593452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40587770 - 40587720
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactac 51  Q
    |||||||||||||   |||||| ||||| ||||||||||||||||||||||    
T  40587770 tgagagagcttctttcagatttatagcataagatcctcggcagttaactac 40587720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 42795158 - 42795116
Alignment:
Q  35 cctcggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||| |||| |||||| |||||||||||||||    
T  42795158 cctcggcagttaactgccgaggaaaacttcggcagttaactgc 42795116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43686871 - 43686921
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactac 51  Q
    ||||||||||| ||  ||||||||||||||| || ||||||||||||||||    
T  43686871 tgagagagcttatgtcagatttgtagcagaaaattctcggcagttaactac 43686921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 45350982 - 45350930
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttt 87  Q
    ||||||| |||||||| |||| |||| | |||||||||||||||||||||||||    
T  45350982 tcctcggtagttaactgccgaggaaacc-tcggcagttaactgcagccggtttt 45350930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 45364186 - 45364227
Alignment:
Q  3 agagagcttctgcgagatttgtagcagaagatcctcggcagt 44  Q
    ||||||||||| | ||||||||||| ||||||||||||||||    
T  45364186 agagagcttctaccagatttgtagccgaagatcctcggcagt 45364227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 618751 - 618803
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  618751 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 618803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 9491485 - 9491405
Alignment:
Q  33 atcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    |||||||| ||||||||  ||| |||| | |||| |||||||||||||||||||   | ||||||| || |||||||||||    
T  9491485 atcctcggtagttaactgtcgaggaaatcctcggtagttaactgcagccggtttcgtatttcctcggcagttaactaccga 9491405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 10098011 - 10098051
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||||||||||||| |||| ||||| ||||    
T  10098011 tcggcagttaactaccgaagaaaacctcggtagttatctgc 10098051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 17834563 - 17834511
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    |||||||||||||||||||||||    | ||||||||||||||| ||||||||    
T  17834563 tcctcggcagttaactaccgaagttttcctcggcagttaactgccgccggttt 17834511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 34742421 - 34742473
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||| | | |||  ||||||||||||||||||| ||||||    
T  34742421 tcggcagttaactgcagtcagatttctaattcctcgacaattaactgccgagg 34742473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 36395037 - 36395081
Alignment:
Q  129 ttttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    |||||||||||||||||||||||||| ||| | || |||||||||    
T  36395037 ttttacttatgtgcctcaaccttatgcaatttctcaacaacaatt 36395081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 13479770 - 13479660
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcga 165  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||||| | |||||| ||||||||||| ||||||||| |||||||||||||||| |    
T  13479770 gcagttaactgcagctggtttttgaattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaa 13479671  T
Q  166 caacaattttc 176  Q
    |||||||||||    
T  13479670 caacaattttc 13479660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 12783921 - 12784074
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||||||| || |    | ||| ||| ||||||||||||||| |||||||| ||| |    
T  12783921 tgagagagctttttccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcgacagctaactgcagccggttattgaattcatcggc 12784020  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatg 154  Q
    | |||||| |||| | | |||||| ||||||||||| ||||||||| |||||||    
T  12784021 agttaactgccgatggggcaaaagcgtattttacttgtgtgcctcagccttatg 12784074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 13404659 - 13404768
Alignment:
Q  64 cggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||||||||| | |||| | ||||||||||| ||||||||  ||||||| |||||||     
T  13404659 cggcagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtattttacttgtgtgcctcggccttatgcaatgtgtt 13404758  T
Q  164 gacaacaatt 173  Q
     |||||||||    
T  13404759 aacaacaatt 13404768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 31605061 - 31605154
Alignment:
Q  184 agcaatgccatatatccggaaggatgttatagcgaagaactcacgattgaggttccaaccaatgaaagcagctgctggccac-aaacatggggg 276  Q
    |||||||| |||||||| ||||||| |||||| ||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  31605061 agcaatgctatatatcccgaaggatcttatagtgaagaactcacaattgagattccaaccaatgaaagccgctgctggccacaaaacatggggg 31605154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 29286276 - 29286166
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||| ||||||| | | ||||||| || ||||||||||||| | |||||  |||  |||||| ||||||||||||||||| |||||||    
T  29286276 tcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatgcaatgtgt 29286177  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  29286176 caacaacaatt 29286166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13401595 - 13401423
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||  | |||||||||||||||||||||| ||||||||||| |      | |  ||||||||||||||||| ||||| ||||||||| |    
T  13401595 tgagagagcttctgtcatatttgtagcagaagatcctcggtagttaactaccaatattttccttagcagttaactgcagccgattttttaattcctcggc 13401496  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | |||||| |||||| | ||||||  ||||| |||  |||  ||||||||||| ||||||||| ||| |||||    
T  13401495 agttaactgccgagggggcaaaagcatatttaactcgtgttactcaaccttataaaatgtgtcaacatcaatt 13401423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 23958964 - 23958824
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    ||||||||||||||||||| |    | |||||| |||||||||||||||||| ||||| |||| || |||||| |||||| |||||||  |||||||| |    
T  23958964 ctcggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtattttagt 23958865  T
Q  136 tatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    |  ||| |||| |||||| | ||||||| ||||||||||||    
T  23958864 tgggtgtctcagccttatcatatgtgtcaacaacaattttc 23958824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 35021289 - 35021399
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||||||||| ||  || |||||| |||||| | |||||||||||||||||  |||  |||| || ||| ||||||||    
T  35021289 tcggcagttaactgcagccggtttttgaattcttccgcatttaactgccgagggggcaaaagtgtattttactcgtgtttctcagccatataaaatgtgt 35021388  T
Q  163 cgacaacaatt 173  Q
    | |||| ||||    
T  35021389 caacaataatt 35021399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 18001260 - 18001148
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||| ||||   | ||      |||||||||| ||| |||||||||||||||||||||    
T  18001260 tcggcagttaactgcagccggttttt-aattcctcaacagttaactgccgatagggcatttacatattttacttgtgtacctcaaccttatgaaatgtgt 18001162  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  18001161 caacaacaattttc 18001148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 32643551 - 32643660
Alignment:
Q  67 cagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgac 166  Q
    ||||||||||||||||| |||| ||||||| | || |||||| |||||||| ||     ||||||||||| || || |||||||||||||||||||  ||    
T  32643551 cagttaactgcagccggatttttaattccttggcagttaactgccgaggaggcatttacgtattttacttgtgggcttcaaccttatgaaatgtgtgaac 32643650  T
Q  167 aacaattttc 176  Q
    ||||||||||    
T  32643651 aacaattttc 32643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 7537245 - 7537193
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  7537245 tcggtagttaactgcagccggttttttaattcctcgacaattaactgccgagg 7537193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 23986009 - 23986099
Alignment:
Q  65 ggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatga 155  Q
    |||||||||||||| |||||||||||||| |||| || |||||| || ||| | |||||  ||||||||||| |||| |||| ||||||||    
T  23986009 ggcagttaactgcaaccggtttttgaatttctcggcagttaactgccaagggggcaaaaacgtattttacttgtgtgtctcagccttatga 23986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 25141105 - 25141215
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||| ||| ||| |||||||||||||||| |||||| ||||   ||||||| | ||  ||| |  ||||||||| ||||||| |||||||    
T  25141105 tcggcagttaactgtagctggtatttgaattcctcgacagttaactgccgaatggacaaaaatataaattattcgtgtgcctcagccttatgcaatgtgt 25141204  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  25141205 caacaacaatt 25141215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 32026089 - 32026039
Alignment:
Q  126 gtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  32026089 gtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattttc 32026039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29061379 - 29061331
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  29061379 tgagagagcttctaccagatttgtagcagaagatcctcggaagttaact 29061331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26856004 - 26855929
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactg 76  Q
    ||||||||||||||| ||||||||||||| |   | |||||||||||||  |||||||| | ||||||||||||||    
T  26856004 tgagagagcttctgccagatttgtagcaggatcgcatcggcagttaacttgcgaagaaatcctcggcagttaactg 26855929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 6320531 - 6320625
Alignment:
Q  79 gccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||||| |||| |||||||||||| |||||| ||||||||||||||   ||||||| |  |||  ||||||||||| |||| |||| |||||||||    
T  6320531 gccggatttttaattcctcgacagttaactgccgaggagacaaaaacatattttattcgtgtttctcaaccttatcaaatatgtcaacaacaatt 6320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 18606091 - 18605982
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||| |   ||||||| | || ||||||||||||| | |||||  ||||||||||  ||||||||| ||| ||  |||||||    
T  18606091 tcggcagttaactgcagccggtgtca-aattcctaggcagttaactaccgagggggcaaaaacgtattttactcgtgtgcctcagcctcatacaatgtgt 18605993  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  18605992 caacaacaatt 18605982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29065837 - 29065791
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||    
T  29065837 tgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29065791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29074850 - 29074804
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||    
T  29074850 tgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29074804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29079614 - 29079568
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||    
T  29079614 tgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29079568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29107423 - 29107377
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||    
T  29107423 tgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29107377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 32034358 - 32034404
Alignment:
Q  3 agagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  32034358 agagatcttctgccagatttgtagcagaagatcatcggcagttaact 32034404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 6204911 - 6204854
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    ||||||||||||||||||||||||||||| |    | |||||||||||||||||||||    
T  6204911 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 6204854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 11691878 - 11691821
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    ||||||||||||||||||||||||||||| |    | |||||||||||||||||||||    
T  11691878 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 11691821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 31768829 - 31768748
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |    | |||||| |||||||||||||| |||| ||||||||| || |||||| ||||||    
T  31768829 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgagg 31768748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 9049076 - 9049135
Alignment:
Q  29 gaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttttt 88  Q
    |||| |||||||||||||||||||||||    | |||| |||||||||||||||||||||    
T  9049076 gaagttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttt 9049135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 333
Target Start/End: Original strand, 31605181 - 31605212
Alignment:
Q  302 atgaatcctatggctattaacttgccagcaat 333  Q
    ||||||||||||||||||||||||||||||||    
T  31605181 atgaatcctatggctattaacttgccagcaat 31605212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 7361238 - 7361128
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||| || |||||  || |||| | |||| | |||||||  |||  |||||  |||||| || ||||||| |||||||    
T  7361238 tcggcagttaactgcagccggtttttaaaatcctcagcagttaattgccgacgggacaaaaacgtaaattactcgtgtgccacagccttatgcaatgtgt 7361139  T
Q  163 cgacaacaatt 173  Q
    | ||| |||||    
T  7361138 caacagcaatt 7361128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 9048151 - 9048097
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttttt 88  Q
    |||||||||||||||||||||||    | |||| |||||||||||||||||||||    
T  9048151 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttt 9048097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 17996589 - 17996539
Alignment:
Q  126 gtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||||||||| | |||||||| ||||||| ||||||||| ||||||||||||    
T  17996589 gtattttacatgtgtgcctcgaccttataaaatgtgtcaacaacaattttc 17996539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 7911661 - 7911698
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  7911661 gcagttaactaccgaagaaaacttcggcagtttactgc 7911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 34801544 - 34801484
Alignment:
Q  103 ttaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    |||||| ||||||||||||||  ||||||||||| ||| ||||| | ||||| ||||||||    
T  34801544 ttaactgccgaggagacaaaaacgtattttacttgtgttcctcagcattatgtaatgtgtc 34801484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41858087 - 41858257
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| |    | |||||||||||||||||||||||||||||||| ||| |    
T  41858087 tgagagagcttctgccagatttgtagcagaagatcctcgacagttaactcccgaggtt--cctcggcagttaactgcagccggtttttgaattcttcgcc 41858184  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | |||||| |||||| | |||||  ||||||||||  |||  |||| || ||||||||||||| |||||||||    
T  41858185 agttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatgaaatgtgtcaacaacaatt 41858257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18441405 - 18441577
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||| |||| |      ||||||||||||| ||  ||||| ||||||| |||| |    
T  18441405 tgagagagtttctgccagatttgtagcagaagatcctcggcagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatttctcggc 18441504  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | |||||| |||||| | |||||  ||||||||||| |||| |||| |||||||||||||||| |||||||||    
T  18441505 agttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgaaatgtgtcaacaacaatt 18441577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 18438681 - 18438571
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||| |||| | | |||||| ||||||||||| ||||| ||| ||||||| |||||||    
T  18438681 tcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattttacttgtgtgcatcagccttatgcaatgtgt 18438582  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  18438581 caacaacaatt 18438571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 7168135 - 7168022
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||||||||| ||| ||  ||||   ||||| | |||||  ||||||||||| ||||||||| |||||||||||||||    
T  7168135 tcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgt 7168036  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  7168035 caacaacaattttc 7168022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 41855415 - 41855306
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||| |||||||| |||||  |||||||||| ||||  |||| || ||||||||||||    
T  41855415 tcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtattttactcatgtttctcagccatatgaaatgtgt 41855316  T
Q  163 cgacaacaat 172  Q
    | ||||||||    
T  41855315 caacaacaat 41855306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 42602553 - 42602395
Alignment:
Q  17 agatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagga 116  Q
    ||||||||| |||||||||||||||||||||||||||| |    | |||||||||||||||| ||||||||||||||| ||| || |||||| ||||       
T  42602553 agatttgtatcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccgatag 42602454  T
Q  117 gacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
     |||||| |||||||||||  |||  |||| || ||||||| ||||| |||||| ||||    
T  42602453 aacaaaaatgtattttactcgtgtttctcagccatatgaaacgtgtcaacaacattttt 42602395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 4866508 - 4866369
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    |||| |||||||||||||| |||||  |||| |||||||||||||||||||||||||| || |||| |||||| |||||| |||||    ||||||||||    
T  4866508 ctcgacagttaactaccgaggaaaaactcggtagttaactgcagccggtttttgaatttcttgacagttaactgccgagg-gacaatttcgtattttact 4866410  T
Q  136 tatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
      |||| |||| |||||||| ||||||  ||||||||||||    
T  4866409 cgtgtgtctcagccttatgatatgtgtgaacaacaattttc 4866369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 38871844 - 38871741
Alignment:
Q  65 ggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcg 164  Q
    ||||||||||||||  || ||| |||||||||||||||||||||||| | ||  |||||  ||||||||||| |||||||||| |||||||||||||||     
T  38871844 ggcagttaactgcaatcgatttatgaattcctcgacaattaactaccaatgaagcaaaaacgtattttacttgtgtgcctcaatcttatgaaatgtgtca 38871745  T
Q  165 acaa 168  Q
    ||||    
T  38871744 acaa 38871741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 38872956 - 38873066
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||| |||||||||  | ||||||  ||||| ||||||| | | |||||||| ||||| ||| ||||||| |||||||    
T  38872956 tcggcagttaactgcagccggtttttaaattcctcggtagttaactgacgaggggacaaaaatattttttacttgtgtgcatcagccttatgcaatgtgt 38873055  T
Q  163 cgacaacaatt 173  Q
    || ||||||||    
T  38873056 cgtcaacaatt 38873066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26451589 - 26451536
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26451589 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccga 26451536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 35 - 173
Target Start/End: Original strand, 34823014 - 34823152
Alignment:
Q  35 cctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttac 134  Q
    |||||||||||||||||||| |    | ||| || |||||||||||||  |||| |||||||||||| |||||| |||||  |||||||  |||| ||||    
T  34823014 cctcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactgccgagaggacaaaaacgtatattac 34823113  T
Q  135 ttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
     | ||||||||||||||||  |||||||| |||||||||    
T  34823114 gtgtgtgcctcaaccttatacaatgtgtcaacaacaatt 34823152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 3395939 - 3395821
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||  |  ||||| ||||||||| || |||||| | |||| | |||||   |||||||||| |||||||||||||||||||||||||    
T  3395939 tcggcagttaactgcaatcaatttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctcaaccttatgaaatgtgt 3395840  T
Q  163 cgacaacaattttcctcaa 181  Q
    | | | |||||||| ||||    
T  3395839 caagagcaattttcatcaa 3395821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 42605234 - 42605312
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    |||||||||||||||||| |    |||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||    
T  42605234 tcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagg 42605312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 28168625 - 28168723
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||| ||||||||||||| | |||||| |||| |||||| |||||| |||||||| |||||   |||||||||  ||||||||| |||||||||||||||    
T  28168625 tcggtagttaactgcagctgatttttgcattcttcgacagttaactgccgaggaggcaaaaacatattttact--tgtgcctcatccttatgaaatgtgt 28168722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 21406343 - 21406269
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||||||||||    | |||| ||||||||||||||||||| ||||||||||| || ||||||    
T  21406343 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaact 21406269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 21800835 - 21800761
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||||||||||    | |||| ||||||||||||||||||| ||||||||||| || ||||||    
T  21800835 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaact 21800761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 21835176 - 21835250
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||| ||||||||    | |||| ||||||||||||||||||| |||||||||||||| ||||||    
T  21835176 tcctcggcagttaaataccgaagttttcctcggtagttaactgcagccggtttatgaattcctcgacatttaact 21835250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 486039 - 486096
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    ||||||| ||||||||||||||||||||| | |||| |||| ||||||||||||||||    
T  486039 gcagaagttcctcggcagttaactaccgaggtaaacctcggtagttaactgcagccgg 486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41274701 - 41274648
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||    
T  41274701 tgagagagcttctgccagatttatagtagaagattctcggcagttaactaccga 41274648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3395975 - 3395927
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||| |||||| | |||||||||||||||||||||||||||||||    
T  3395975 tgagagagtttctgccatatttgtagcagaagatcctcggcagttaact 3395927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22547552 - 22547504
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  22547552 tgagagagcttctgccagatttgtagtagaagatcctcggtagttaact 22547504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38871882 - 38871834
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  38871882 tgagagagctcctgccagatttgtagcagaagatccttggcagttaact 38871834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 35389555 - 35389445
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||| |||||||||||| |||| || ||||||  ||| ||| |||||  |||  |||||  | || |||| ||||||| |||||||    
T  35389555 tcggcagttaactgcagctggtttttgaatttctcggcagttaactgtcgaagaggcaaaaacgtaaattactcgtatgtctcagccttatgcaatgtgt 35389456  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  35389455 caacaacaatt 35389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 45454453 - 45454355
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    |||||||||||||||| |||| |||  ||||||||| || |||||| |||||||| |||||  ||||||||||  |||||| ||  ||||| |||||||    
T  45454453 tcggcagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttactagtgtgccacagtcttatcaaatgtg 45454355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 28646273 - 28646318
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  28646273 tcggcagttaactgcagccgatttttaaattcctcggcaattaact 28646318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 28650857 - 28650902
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  28650857 tcggcagttaactgcagccgatttttaaattcctcggcaattaact 28650902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 1114818 - 1114738
Alignment:
Q  35 cctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    |||||||||||||||||||| ||   | ||||||||||||||||||||| |||  |||| |||| || |||||| ||||||    
T  1114818 cctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagg 1114738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 3696112 - 3696076
Alignment:
Q  41 cagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3696112 cagttaactaccgaagaaaacatcagcagttaactgc 3696076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 4529269 - 4529233
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactg 76  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4529269 gcagttaactaccgaagaaaacttcggcagttaactg 4529233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 1116214 - 1116269
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggaga 118  Q
    ||||||||||||||||||||| |||  |||||||||||| |||||| |||| ||||    
T  1116214 tcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgatgaga 1116269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 12715719 - 12715769
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtt 85  Q
    |||||||||||||||| ||||  ||||| |||||||||||||||||||||||    
T  12715719 tcctcggcagttaactgccgac-aaaacttcggcagttaactgcagccggtt 12715769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 18205860 - 18205789
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaac 107  Q
    ||||||||||||||||||| |    | | |||||||||||||||||||||||||||||| ||| || |||||    
T  18205860 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaac 18205789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 35962383 - 35962276
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||||||||||||||| |||| |    | |||||||||||||| |||||| |||  |||||||||||| |||||| |||||  | |||||  ||||||||    
T  35962383 tcctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtatttta 35962284  T
Q  134 cttatgtg 141  Q
    || |||||    
T  35962283 ctaatgtg 35962276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 43188121 - 43188022
Alignment:
Q  63 tcggcagttaactgc-agccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    ||||||||||||| | |||||| |||| |||||||||||||||||||  ||||| | |||||  ||||||||||  |||  |||| |||||| |||||||    
T  43188121 tcggcagttaactaccagccggatttttaattcctcgacaattaactgtcgagggggcaaaatcgtattttactcgtgtttctcagccttatcaaatgtg 43188022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 45133313 - 45133238
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||| |||||| ||||  ||||||||| ||||||||     ||||||| ||||||||||||||||    
T  45133313 gcagttaactaccgaggaaaacttcggttgttaactgccgccggtttcatttttcctcggcaattaactaccgagg 45133238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 39751120 - 39751011
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||||||||   ||||| ||| || |||| | || ||| | |||||  ||||||||||  ||||||||||| ||||| |||||||    
T  39751120 tcggcagttaactgcagccggtttca-aattcatcggcagttaattgccaagggggcaaaaacgtattttactcgtgtgcctcaacattatgcaatgtgt 39751022  T
Q  163 cgacaacaatt 173  Q
    | ||| |||||    
T  39751021 caacagcaatt 39751011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 44052260 - 44052350
Alignment:
Q  71 taactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    ||||||||||||| ||   ||||||||| |||||||||||||||| | |||||  ||  ||||||  |||||| |||||||||| ||||||    
T  44052260 taactgcagccggattgcaaattcctcggcaattaactaccgagggggcaaaaacgtcatttactcgtgtgccacaaccttatgtaatgtg 44052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 39530 - 39489
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaatt 104  Q
    ||||||||||||||||||||| |||  |||||||||||||||    
T  39530 tcggcagttaactgcagccggatttcaaattcctcgacaatt 39489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 35966753 - 35966870
Alignment:
Q  41 cagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgt 140  Q
    |||||||||||||| ||   | ||| || |||||||||| ||| |||  ||||||||| || |||||| |||||| | ||||| |||||||||||  |||    
T  35966753 cagttaactaccgaggatttcttcgacaattaactgcagtcggatttcaaattcctcggcagttaactgccgagggggcaaaattgtattttactagtgt 35966852  T
Q  141 gcctcaaccttatgaaat 158  Q
    | | ||||||||| ||||    
T  35966853 gacacaaccttatcaaat 35966870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 37779758 - 37779713
Alignment:
Q  4 gagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||  ||||||||||||||| ||||||| |||||||||    
T  37779758 gagagcttctgtcagatttgtagcagaatatcctcgacagttaact 37779713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 41743937 - 41743876
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaag 124  Q
    ||||||||||||||||||||| |||  ||||||||| || ||||||| ||||| | ||||||    
T  41743937 tcggcagttaactgcagccggatttcaaattcctcggcagttaactatcgagggggcaaaag 41743876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 7340143 - 7340091
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||||||||||| |||  | |||| |||||||||| ||||||||    
T  7340143 tcctcggcagttaactaccgaggaattcctcggtagttaactgccgccggttt 7340091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 40740983 - 40740931
Alignment:
Q  33 atcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtt 85  Q
    ||||||||||||||||| ||||||    | |||||||||||||||||||||||    
T  40740983 atcctcggcagttaactgccgaagttttcctcggcagttaactgcagccggtt 40740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41500198 - 41500370
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |      ||||||||||||||||||||| |||||||||| | ||     
T  41500198 tgagagagcttatgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggattttgaattctttgat 41500297  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    | |||||| |||||| | |||||| ||||||||||  |||  |||| || ||||||||||||| ||| |||||    
T  41500298 agttaactgccgagggggcaaaagcgtattttactcgtgtttctcagccatatgaaatgtgtcaacatcaatt 41500370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 35493367 - 35493477
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||||||| | |||||| ||||||||||  |||| |||||||||||| |||||||    
T  35493367 tcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatgtgt 35493466  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  35493467 caacaacaatt 35493477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24512276 - 24512114
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |      |||||| ||||||||||| ||||||| |||||||| ||    
T  24512276 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttttcggcaattaactgcagctggttttttaattcctcaac 24512177  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    | ||||||  ||||| |  ||||  ||||||||||| |||  |||| || |||||||||||||    
T  24512176 agttaactgtcgagggggtaaaaacgtattttacttgtgtttctcagccatatgaaatgtgtc 24512114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 2917730 - 2917617
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||| ||||||||||| |||| |||| || |||||| |||||| | |||||  ||||||||||| ||||||||| |||||||||||||||    
T  2917730 tcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgtgcctcagccttatgaaatgtgt 2917631  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  2917630 caacaacaattttc 2917617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 45475487 - 45475374
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||| |||||||||||||||| |||| || |||||| |||||| | |||||  ||||||||||| |||| |||| |||||||||||||||    
T  45475487 tcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttacttgtgtgtctcagccttatgaaatgtgt 45475388  T
Q  163 cgacaacaattttc 176  Q
    | ||| ||||||||    
T  45475387 caacatcaattttc 45475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 23409527 - 23409640
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||| |||||  | |||| | ||||||||||  ||||| ||| ||||||| || ||||    
T  23409527 tcggcagttaactgcagccagtttttgaattcctcggcaattaactgccgagagggcaaacgcgtattttactagtgtgcatcagccttatgtaacgtgt 23409626  T
Q  163 cgacaacaattttc 176  Q
    | ||||||||||||    
T  23409627 ccacaacaattttc 23409640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 25184827 - 25184965
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    ||||||||||||||||||||| |    | ||||||||||||||||||||||||   |||||||||||| |||||| | |||| | |||||  ||||||||    
T  25184827 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttca-aattcctcgacagttaactgctgagggggcaaaaacgtatttta 25184925  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||  ||||||||||||||||| ||| |||| |||||||||    
T  25184926 ctcgtgtgcctcaaccttatgcaatctgtcaacaacaatt 25184965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2920480 - 2920533
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2920480 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccga 2920533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 28342599 - 28342460
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaa-catcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttt 132  Q
    ||||||||||||||||||| |||||   | ||||||||||| |||||||||||||||||||| |||||| |||||| |||| | | |||||  |||  ||    
T  28342599 tcctcggcagttaactacc-aagaatttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaatt 28342501  T
Q  133 acttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    ||||||||| || | ||||||| |||||||| |||||||||    
T  28342500 acttatgtgtcttagccttatgcaatgtgtcaacaacaatt 28342460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 24601715 - 24601636
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    ||||||||||||||||||||||||   | |||| |||||||||||||| |||||| |||||||||||| |||||||||||    
T  24601715 tcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24601636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 24612399 - 24612478
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    ||||||||||||||||||||||||   | |||| |||||||||||||| |||||| |||||||||||| |||||||||||    
T  24612399 tcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24612478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 41181484 - 41181369
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||| || |||||||| |||||||||||| || |||||| |||||| | |||||  ||||||||||  ||||||||| ||||||| |||||||    
T  41181484 tcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatgcaatgtgt 41181385  T
Q  163 cgacaacaattttcct 178  Q
    | ||| ||||| ||||    
T  41181384 caacatcaattctcct 41181369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2648226 - 2648057
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    |||||||| |||||| ||||||||||||||||||| |||||| |||||||||||      | ||||||||||||| ||  | ||| ||||||||||||||    
T  2648226 tgagagagtttctgccagatttgtagcagaagatcatcggcaattaactaccgagattttcctcggcagttaactacatacagttattgaattcctcgac 2648127  T
Q  101 aattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaaca 170  Q
    || |||||  ||||  |  ||||  ||||||||||  |||  |||||||||||||||||| || ||||||    
T  2648126 aagtaactgtcgagacggaaaaaacgtattttactcgtgtttctcaaccttatgaaatgtctcaacaaca 2648057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 35490724 - 35490627
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtc 163  Q
    ||||||||||||||||||||||||||||| ||| || |||||   ||||||| ||||| |||||||||||  |||| |||| ||||||| ||||||||    
T  35490724 gcagttaactgcagccggtttttgaattcttcggcagttaaccgtcgaggaggcaaaaatgtattttactcgtgtgtctcagccttatgcaatgtgtc 35490627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 12905596 - 12905496
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||| ||||| |||| |||| || |||||| |||||| || ||||| ||||||||||  |||  |||| |||||||||||||||    
T  12905596 tcggcagttaactgcagccgatttttcaatttctcggcagttaactgccgaggggaaaaaagcgtattttactcttgtttctcagccttatgaaatgtgt 12905497  T
Q  163 c 163  Q
    |    
T  12905496 c 12905496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29093792 - 29093840
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29093792 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 29093840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43491218 - 43491084
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgac 100  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||||||||| | |    | ||| ||||||| ||||||||||| || ||||||||| |    
T  43491218 tgagagagcttctgccagatttataacagaagattctcggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaattcctcggc 43491119  T
Q  101 aattaactaccgaggagacaaaagtgtattttact 135  Q
    | ||||||    || |||||||||| |||||||||    
T  43491118 agttaactgttaagaagacaaaagtatattttact 43491084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 45137433 - 45137531
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    |||||||||||||| |||||    ||||||||||||||||||||||  |||| ||||||||| ||||||||| || ||||| |||||  ||||||||||    
T  45137433 tcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtattttact 45137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 82292 - 82396
Alignment:
Q  67 cagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgac 166  Q
    ||||||||||||||||||||   |||| ||||||| |||||||||||||| ||||||  ||||||||||  |||| |  ||||||||| |||||||| ||    
T  82292 cagttaactgcagccggtttca-aattactcgacagttaactaccgaggaaacaaaaacgtattttactcgtgtgacataaccttatgcaatgtgtcaac 82390  T
Q  167 aacaat 172  Q
    ||||||    
T  82391 aacaat 82396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 19186791 - 19186683
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcga 165  Q
    ||||||||||||||||| |||||||||| |||| || || ||| |||| | |  ||||  ||||||||||| |||| |||| |||||||| ||||||| |    
T  19186791 gcagttaactgcagccgctttttgaattgctcggcagtttactgccgatggggtaaaaacgtattttacttgtgtgtctcagccttatgatatgtgtcaa 19186692  T
Q  166 caacaattt 174  Q
    |||||||||    
T  19186691 caacaattt 19186683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 34921758 - 34921897
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    ||||||||||||||||||| |    | || |||||||||||||||||||||||||||| |||| || |||||||||| || | |||||  ||||||||||    
T  34921758 ctcggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagttaactaccg-gggggcaaaaacgtattttact 34921856  T
Q  136 tatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
      |||  |||  |||||||||||||||| | | ||||||||    
T  34921857 cgtgtttctctgccttatgaaatgtgtcaatagcaattttc 34921897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 8268780 - 8268887
Alignment:
Q  68 agttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgaca 167  Q
    |||||| |||||||| |||||| ||||||  ||| |||||| |||||| |||||||  |||||||||| |||| | |||  ||||| ||||||||| |||    
T  8268780 agttaattgcagccgatttttgcattccttaacagttaactgccgaggggacaaaatcgtattttactaatgtacgtcagtcttataaaatgtgtcaaca 8268879  T
Q  168 acaatttt 175  Q
    ||||||||    
T  8268880 acaatttt 8268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 19187222 - 19187361
Alignment:
Q  36 ctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    ||||||||||||||||||| |    | ||||||| |||||||| | || ||||||||| |||| || |||||| |||||| | |||||  ||||||||||    
T  19187222 ctcggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtattttact 19187321  T
Q  136 tatgtgcctcaaccttatgaaatgtgtcgacaacaatttt 175  Q
    | |||| |||| |||||||| |||| |  |||||||||||    
T  19187322 tgtgtgtctcagccttatgatatgtctgaacaacaatttt 19187361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 1096642 - 1096544
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    ||||||||||||||||||||| |||  ||||||||| || |||||  |||||| | |||||  ||||||||||  |||||| ||||||||| |||||||    
T  1096642 tcggcagttaactgcagccggatttcaaattcctcggcagttaacagccgagggggcaaaatcgtattttactagtgtgccacaaccttatcaaatgtg 1096544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 10365756 - 10365846
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaa 91  Q
    ||||||||||| ||| |||||||||||| ||||||||||||| ||||||||| | |    | ||||||||||||| ||||||||| |||||    
T  10365756 tgagagagcttatgccagatttgtagcaaaagatcctcggcatttaactaccaaggttttcctcggcagttaactacagccggttattgaa 10365846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 16580562 - 16580482
Alignment:
Q  93 tcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 173  Q
    |||| |||||||||||  ||||||| ||||| |||||||||||  |||| |||| ||||||| |||||||| |||||||||    
T  16580562 tccttgacaattaactgtcgaggaggcaaaaatgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaatt 16580482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 26858204 - 26858148
Alignment:
Q  19 atttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaact 75  Q
    |||||||||||||||||||||||||||||| |||| | ||||| ||||| |||||||    
T  26858204 atttgtagcagaagatcctcggcagttaaccaccggaaaaaacctcggcggttaact 26858148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40679561 - 40679608
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaac 48  Q
    |||||||| |||| | ||||||||||||||||||||||||||||||||    
T  40679561 tgagagaggttcttccagatttgtagcagaagatcctcggcagttaac 40679608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 17424216 - 17424154
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttttt 88  Q
    ||||||||||||||||||||||||||||| |    | ||||||||||||||||||||| ||||    
T  17424216 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttt 17424154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 24607594 - 24607704
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||||||||||||||||||||||| || || ||| || |||||| | |||| |  ||||  |||  |||| | ||||||||| ||||||| |||||||    
T  24607594 tcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgagggggaaaaaacgtaaattacctgtgtgcctcagccttatgcaatgtgt 24607693  T
Q  163 cgacaacaatt 173  Q
    | |||||||||    
T  24607694 caacaacaatt 24607704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 2648845 - 2648776
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttt 132  Q
    |||| ||||||||||||||||||||||||||||| | || |||||| |||||  | |||||| |||||||    
T  2648845 tcggtagttaactgcagccggtttttgaattccttggcagttaactgccgagagggcaaaagcgtatttt 2648776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34638246 - 34638194
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaag 56  Q
    |||||||||||||   ||||||||||||||||||||||| || |||||||||||||    
T  34638246 tgagagagcttct---agatttgtagcagaagatcctcgacaattaactaccgaag 34638194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39393146 - 39393093
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccga 54  Q
    |||||||||||||   |||||||||| |||||||||||| ||||||||||||||    
T  39393146 tgagagagcttctatcagatttgtagtagaagatcctcgacagttaactaccga 39393093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 44100775 - 44100726
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||||||||||||||| || | |||||||||| ||||||||    
T  44100775 tcggcagttaactaccgaagaaaacctcagtagttaactgccgccggttt 44100726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 3795384 - 3795332
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||  |||||||||||| |||||| ||||||    
T  3795384 tcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagg 3795332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 36255063 - 36255019
Alignment:
Q  64 cggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||    
T  36255063 cggcagttaactgcagccgatttttaaattcctcggcaattaact 36255019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 41497519 - 41497419
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    |||||| ||||||||||||||||||||||||| ||| || |||| |  ||||| | |||||  |||  |||||  ||||||||| ||||||| |||||||    
T  41497519 tcggcaattaactgcagccggtttttgaattcttcggcagttaagtgtcgaggtggcaaaaacgtaaattactcgtgtgcctcagccttatgcaatgtgt 41497420  T
Q  163 c 163  Q
    |    
T  41497419 c 41497419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 45479820 - 45479935
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggaga-caaaagtgtattttacttatgtgcctcaaccttatgaaatgtg 161  Q
    |||||| |||||| ||| || ||||| |||| |||| || |||||| ||||| ||| |||||  |||||||||| ||||  || | ||||||||||||||    
T  45479820 tcggcaattaactacagtcgattttttaatttctcggcagttaactgccgag-agagcaaaatcgtattttactcatgtttctgagccttatgaaatgtg 45479918  T
Q  162 tcgacaacaattttcct 178  Q
    || ||||||||||||||    
T  45479919 tcaacaacaattttcct 45479935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 28472126 - 28472087
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactg 76  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  28472126 tcggcagttaactaccgaagaaaacctcggtagttaactg 28472087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 178
Target Start/End: Original strand, 41053698 - 41053809
Alignment:
Q  67 cagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgac 166  Q
    |||||||||||||||||||| | |||| || |||| ||||||  ||||||| |||||  |||  |||||   |||||||| ||||||| |||||||| ||    
T  41053698 cagttaactgcagccggtttcttaatttctggacagttaactgtcgaggaggcaaaaacgtaaattactcgcgtgcctcagccttatgtaatgtgtcaac 41053797  T
Q  167 aacaattttcct 178  Q
    | ||||| ||||    
T  41053798 agcaattctcct 41053809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 43950268 - 43950374
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||||| ||||| ||||||| ||||||| |  || |||||| |||||| | ||||| |||||||||||  |||  |||| |||||| ||||||||    
T  43950268 tcggcagttaattgcagtcggtttt-gaattccacagcagttaactgccgagggggcaaaaatgtattttactcgtgtttctcagccttatcaaatgtgt 43950366  T
Q  163 cgacaaca 170  Q
    | ||||||    
T  43950367 caacaaca 43950374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 12908455 - 12908505
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    |||||||||||||||||||  |||||||||| ||||||| |||||| ||||    
T  12908455 tcggcagttaactgcagccaatttttgaatttctcgacagttaactgccga 12908505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 2983433 - 2983470
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  2983433 gcagttaactaccgaggaaaacctcggcagttaactgc 2983470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 3937841 - 3937898
Alignment:
Q  26 gcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    ||||||| |||||||||||||||| |||| |   || |||||||||||||||||||||    
T  3937841 gcagaagttcctcggcagttaacttccgaggtttacctcggcagttaactgcagccgg 3937898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 7189948 - 7189997
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    |||||||||||||||||||||||    | |||||||||||||||||||||    
T  7189948 tcctcggcagttaactaccgaagttttcctcggcagttaactgcagccgg 7189997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 40221170 - 40221133
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  40221170 gcagttaactaccgaggaaaacctcggcagttaactgc 40221133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 41565351 - 41565388
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  41565351 gcagttaactaccgaggaaaacctcggcagttaactgc 41565388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 43493283 - 43493380
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgt 160  Q
    ||||||||||  |||||||| ||||| |||||||   || |||||| |||||| | |||||  ||||||||||| |||| |||| ||||||| |||||    
T  43493283 tcggcagttatttgcagccgattttttaattccttagcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgtaatgt 43493380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 213449 - 213501
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||||||||||| |||  | |||| |||||||||| ||||||||    
T  213449 tcctcggcagttaactaccgaggaattcctcggtagttaactgccgccggttt 213501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 14181849 - 14181881
Alignment:
Q  64 cggcagttaactgcagccggtttttgaattcct 96  Q
    |||||||||||||||| ||||||||||||||||    
T  14181849 cggcagttaactgcagacggtttttgaattcct 14181881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 17688355 - 17688308
Alignment:
Q  37 tcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtt 85  Q
    ||||||||||||| ||||||||| | |||| ||||||||||||||||||    
T  17688355 tcggcagttaactgccgaagaaa-cttcggtagttaactgcagccggtt 17688308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 18003269 - 18003321
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||||||||||| |||  | |||| |||||||||| ||||||||    
T  18003269 tcctcggcagttaactaccgaggaattcctcggtagttaactgccgccggttt 18003321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 30271143 - 30271071
Alignment:
Q  41 cagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccga 113  Q
    ||||||||||||||||    | || |||||||||||||||||| |||| |||||||| ||  |||||||||||    
T  30271143 cagttaactaccgaagttttcctcagcagttaactgcagccggatttttaattcctcaacctttaactaccga 30271071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 38945809 - 38945757
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgagg 115  Q
    ||||||||||||||||||||| |||  ||||||||| || |||||| ||||||    
T  38945809 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 38945757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 40055542 - 40055502
Alignment:
Q  35 cctcggcagttaactaccgaagaaaacatcggcagttaact 75  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  40055542 cctcggcagttaactaccaaggaaaacctcggcagttaact 40055502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 41053565 - 41053617
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggttt 86  Q
    ||||||||||||||||||||| ||   | ||| ||||||||||||||||||||    
T  41053565 tcctcggcagttaactaccgatgatttcctcgccagttaactgcagccggttt 41053617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 3932 - 3843
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttat 153  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||| |||||||   |||||||||| ||||||||||||||||    
T  3932 tcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaa-aatattttacttgtgtgcctcaaccttat 3843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 11739 - 11853
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcga 165  Q
    ||||||||||||||||||||||||||||| ||  || |||||| |||| | | |||||||||||||||||| |||  ||||| ||||| ||||||||| |    
T  11739 gcagttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaagtgtattttacttgtgtatctcaatcttataaaatgtgtcaa 11838  T
Q  166 caacaattttcctca 180  Q
    || ||||||||||||    
T  11839 cagcaattttcctca 11853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18863 - 18940
Alignment:
Q  1 tgagagagcttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgca 78  Q
    ||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  18863 tgagaaagcttctgccagatttgtagcagaagatcctcgacagttaactaccgaggaaagcctcggcagttaactgca 18940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 16439 - 16346
Alignment:
Q  82 ggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||||||| |||| ||||||| ||||||||||||| | |||||   |||||| | | |||||||||  ||||||||||||||| |||| |||||||    
T  16439 ggtttttcaatttctcgacagttaactaccgagggggcaaaaacatatttt-catgtgtgcctcagtcttatgaaatgtgtcaacaataattttc 16346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 12361 - 12434
Alignment:
Q  10 ttctgcgagatttgtagcagaagatcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccgg 83  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  12361 ttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcatcggcagttaactgcagccgg 12434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 7330 - 7430
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttacttatgtgcctcaaccttatgaaatgtgt 162  Q
    ||||||||| | |||||||||||||||||||||||  |||||||||  | ||||| |||||   ||||||||| |||||||||||||||||||||| |||    
T  7330 tcggcagttgattgcagccggtttttgaattcctcagcaattaactgtcaaggaggcaaaaacatattttactcatgtgcctcaaccttatgaaatttgt 7429  T
Q  163 c 163  Q
    |    
T  7430 c 7430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 17348 - 17467
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    ||||||||||||||||||||| ||   | ||||||||||||||||||||| |||  ||||||||| || |||||| |||||| |  ||||  ||||||||    
T  17348 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 17447  T
Q  134 cttatgtgcctcaaccttat 153  Q
    ||  |||| | |||||||||    
T  17448 ctagtgtggcacaaccttat 17467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 18097 - 18060
Alignment:
Q  40 gcagttaactaccgaagaaaacatcggcagttaactgc 77  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  18097 gcagttaactaccgaagaaaacctcgacagttaactgc 18060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 15750 - 15705
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  15750 tcggcagttaactgcaaccggtttttgaattcctcgacagttaact 15705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 20109 - 20183
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaact 108  Q
    ||||||||||| ||||||||| ||   | ||| |||||||||| ||||| ||||||||||||||| || ||||||    
T  20109 tcctcggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagttaact 20183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 232595 - 232523
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtattttact 135  Q
    ||||||||||||||||| ||| |||| |||||||||||| |||||| |||||| || ||||  ||||||||||    
T  232595 tcggcagttaactgcagtcggatttttaattcctcgacagttaactgccgaggggataaaatcgtattttact 232523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 27427 - 27377
Alignment:
Q  126 gtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    ||||||||||| ||||||| ||| |||||||||||||| ||||||||||||    
T  27427 gtattttacttgtgtgccttaactttatgaaatgtgtcaacaacaattttc 27377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 903 - 857
Alignment:
Q  3 agagagcttctgcgagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  903 agagagcttctgccagatttgtagaggaagatcctcggcagttaact 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 15920 - 15976
Alignment:
Q  120 aaaagtgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    |||| |||||||||||| | ||||||| ||| |||||||||||| ||||||||||||    
T  15920 aaaattgtattttacttgtatgcctcagcctaatgaaatgtgtcaacaacaattttc 15976  T

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Target: scaffold0340 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 1178 - 1306
Alignment:
Q  34 tcctcggcagttaactaccgaagaaaacatcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttta 133  Q
    |||||||||||||||| |||| |    | ||||||||||| ||| ||||| |||  ||||||||| || |||||| |||||| |||||||  |||  |||    
T  1178 tcctcggcagttaacttccgaggttttcctcggcagttaattgctgccgg-tttcaaattcctcggcagttaactgccgaggggacaaaaacgtaaatta 1276  T
Q  134 cttatgtgcctcaaccttatgaaatgtgtc 163  Q
    ||  ||||||||| ||||||| ||||||||    
T  1277 ctcgtgtgcctcagccttatgcaatgtgtc 1306  T

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Target: scaffold0147 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 885 - 934
Alignment:
Q  127 tattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 176  Q
    |||||||||| ||||||||| ||||||||||| |||| ||| ||||||||    
T  885 tattttacttgtgtgcctcagccttatgaaatatgtcaacagcaattttc 934  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 23253 - 23322
Alignment:
Q  63 tcggcagttaactgcagccggtttttgaattcctcgacaattaactaccgaggagacaaaagtgtatttt 132  Q
    |||| ||||||||||||||| ||||| |||||||||||| |||| || ||| | |||||||  |||||||    
T  23253 tcggtagttaactgcagccgatttttaaattcctcgacagttaaatatcgatgggacaaaatcgtatttt 23322  T

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Target: scaffold0169 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 1686 - 1718
Alignment:
Q  66 gcagttaactgcagccggtttttgaattcctcg 98  Q
    |||||||||||||| ||||||||||||||||||    
T  1686 gcagttaactgcagtcggtttttgaattcctcg 1718  T

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