View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21472_high_11 (Length: 342)

Name: NF21472_high_11
Description: NF21472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21472_high_11
NF21472_high_11
[»] chr5 (15 HSPs)
chr5 (167-342)||(1722788-1722963)
chr5 (1-90)||(1723081-1723166)
chr5 (259-334)||(20728790-20728865)
chr5 (259-337)||(18321005-18321083)
chr5 (269-342)||(5734760-5734833)
chr5 (259-342)||(36418143-36418226)
chr5 (269-342)||(19278977-19279050)
chr5 (259-342)||(35190167-35190250)
chr5 (259-339)||(38405336-38405416)
chr5 (259-342)||(30738036-30738118)
chr5 (259-338)||(26275790-26275869)
chr5 (276-342)||(13543366-13543431)
chr5 (201-257)||(36418285-36418341)
chr5 (198-257)||(13543489-13543548)
chr5 (259-327)||(32459648-32459716)
[»] chr7 (18 HSPs)
chr7 (259-342)||(42990796-42990879)
chr7 (259-342)||(1348904-1348987)
chr7 (259-342)||(20184029-20184111)
chr7 (262-339)||(8039910-8039987)
chr7 (259-342)||(29590872-29590955)
chr7 (259-342)||(33235297-33235380)
chr7 (259-342)||(39958940-39959023)
chr7 (259-336)||(5805301-5805378)
chr7 (269-342)||(23679292-23679365)
chr7 (259-342)||(1441252-1441334)
chr7 (262-341)||(35215072-35215151)
chr7 (259-342)||(27995356-27995439)
chr7 (259-322)||(20366310-20366373)
chr7 (259-342)||(5559404-5559489)
chr7 (259-317)||(10620054-10620112)
chr7 (167-198)||(1441399-1441430)
chr7 (167-198)||(27995197-27995228)
chr7 (259-300)||(1286631-1286672)
[»] chr6 (8 HSPs)
chr6 (259-342)||(17179919-17180002)
chr6 (259-336)||(24139293-24139370)
chr6 (274-342)||(17131979-17132047)
chr6 (270-342)||(9902195-9902267)
chr6 (259-342)||(28630404-28630487)
chr6 (259-342)||(10963001-10963081)
chr6 (259-342)||(11527790-11527873)
chr6 (201-257)||(10962919-10962975)
[»] chr4 (12 HSPs)
chr4 (259-342)||(19681451-19681534)
chr4 (259-342)||(31229546-31229629)
chr4 (259-339)||(52567980-52568060)
chr4 (269-342)||(52866119-52866192)
chr4 (263-340)||(19632027-19632104)
chr4 (285-342)||(5387392-5387449)
chr4 (275-329)||(8408653-8408707)
chr4 (259-339)||(30542883-30542963)
chr4 (219-257)||(8408747-8408785)
chr4 (209-257)||(19681377-19681425)
chr4 (259-311)||(42115835-42115887)
chr4 (209-257)||(52182055-52182103)
[»] chr2 (8 HSPs)
chr2 (259-342)||(27893339-27893422)
chr2 (259-338)||(19080891-19080970)
chr2 (259-336)||(20535744-20535821)
chr2 (269-342)||(11871506-11871579)
chr2 (259-338)||(15506250-15506329)
chr2 (259-342)||(36196282-36196365)
chr2 (259-342)||(39301578-39301661)
chr2 (259-332)||(42117002-42117075)
[»] chr8 (18 HSPs)
chr8 (259-342)||(30576414-30576497)
chr8 (259-342)||(39701146-39701229)
chr8 (259-332)||(23553666-23553739)
chr8 (263-339)||(9276749-9276825)
chr8 (259-342)||(40553035-40553118)
chr8 (259-342)||(8714108-8714191)
chr8 (259-341)||(4614036-4614118)
chr8 (269-342)||(25729911-25729984)
chr8 (269-342)||(25737397-25737470)
chr8 (259-342)||(6236025-6236108)
chr8 (259-342)||(16197290-16197373)
chr8 (4-56)||(10304469-10304521)
chr8 (300-342)||(44041057-44041099)
chr8 (209-257)||(30576340-30576388)
chr8 (273-332)||(5358859-5358918)
chr8 (198-257)||(40553144-40553203)
chr8 (167-200)||(5358718-5358751)
chr8 (201-257)||(9276663-9276719)
[»] chr3 (7 HSPs)
chr3 (259-342)||(31247422-31247505)
chr3 (259-342)||(53783138-53783221)
chr3 (259-336)||(3087341-3087418)
chr3 (259-342)||(4276399-4276481)
chr3 (209-257)||(21376755-21376803)
chr3 (198-257)||(31247304-31247363)
chr3 (167-198)||(4276271-4276302)
[»] chr1 (13 HSPs)
chr1 (259-342)||(34254761-34254844)
chr1 (259-342)||(8903057-8903140)
chr1 (259-338)||(10686496-10686575)
chr1 (259-332)||(27351332-27351405)
chr1 (259-342)||(37663309-37663391)
chr1 (270-342)||(4772388-4772460)
chr1 (259-342)||(48352474-48352557)
chr1 (274-342)||(29418805-29418873)
chr1 (290-337)||(4030543-4030590)
chr1 (201-257)||(49650746-49650802)
chr1 (223-260)||(27351257-27351294)
chr1 (201-257)||(10686377-10686433)
chr1 (201-257)||(27351431-27351487)
[»] scaffold0027 (1 HSPs)
scaffold0027 (259-342)||(9648-9730)
[»] scaffold0070 (2 HSPs)
scaffold0070 (269-342)||(28816-28889)
scaffold0070 (209-257)||(28733-28781)
[»] scaffold0746 (2 HSPs)
scaffold0746 (277-342)||(314-379)
scaffold0746 (167-200)||(490-523)
[»] scaffold0374 (1 HSPs)
scaffold0374 (259-311)||(16417-16469)


Alignment Details
Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 167 - 342
Target Start/End: Complemental strand, 1722963 - 1722788
Alignment:
Q  167 gataaactatttcactgttacccctgctgtcaattgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaagataatggtc 266  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||| |  |||||||||| ||||||||    
T  1722963 gataaactatttcactgttacccctgctgtcaaatgatgctcatgtagccatcaagttgttgacttgaatcaaaatgctcccttttaaaaggtaatggtc 1722864  T
Q  267 ataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1722863 ataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 1722788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1723166 - 1723081
Alignment:
Q  1 agttttctgcactagttaagaaagcatttttcttggtgaaatttaatgtgcttgattatactattttgcattgcatgccacccatacaac 90  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    ||||||||||||||||||||||||||    
T  1723166 agttttctgcactagttaagaaagcatttttcttggtggaatttaatgtgcttgattata----tttgcattgcatgccacccatacaac 1723081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 20728790 - 20728865
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactatta 334  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20728790 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcaatatta 20728865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 259 - 337
Target Start/End: Complemental strand, 18321083 - 18321005
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaac 337  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18321083 taatggtcacaaatgatcatttatagtgctacaaagacaactatttacaacaacaaatgtctttctagcattattaaac 18321005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 5734833 - 5734760
Alignment:
Q  269 aaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  5734833 aaatgatcatttatagtgctagaaagacaactatttacgacaacaaatgcctttctagcactattaaacgacat 5734760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 36418143 - 36418226
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  36418143 taatggtcacaaatgatcatttatagtgctaataagacagctatttacaacaataaatgtctttctagcactattaaacgacat 36418226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 19278977 - 19279050
Alignment:
Q  269 aaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||    
T  19278977 aaatgatcatttatagtgctagaaatgcaactatttacaacaacaattgcctttctagcactattaaacgacat 19279050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 35190167 - 35190250
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||| | | ||| |||||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  35190167 taatggtcacaaatgatcatttaaagttctataaagacaactatttacaacaacaaatatgtttcaagcactattaaacgacat 35190250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 38405416 - 38405336
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacga 339  Q
    |||||| || ||||||||||||||||||||||||||| | | ||||| | |||||||||||||||||||| ||||||||||    
T  38405416 taatgggcacaaatgatcatttataatgctagaaagatagccatttatagcaacaaatgtctttctagcattattaaacga 38405336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 30738118 - 30738036
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||| |||| |||| |||||||||| ||||||||||||||||||||||||||||||| |||||| | |||||||||||| ||||    
T  30738118 taatagtcacaaattatcatttatagtgctagaaagacaactatttacaacaacaaa-gtctttttggcactattaaacaacat 30738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 26275869 - 26275790
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacg 338  Q
    ||||||||| |||||||| |||||| | ||||||||  | ||||||||||| |||||| |||||||||||||||| ||||    
T  26275869 taatggtcacaaatgatcctttatagttctagaaaggaagctatttacaacgacaaatttctttctagcactattgaacg 26275790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 13543366 - 13543431
Alignment:
Q  276 catttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||||||| |||||||||| || |||||||||||||||||||||| | | |||||||||||||||||    
T  13543366 catttatagtgctagaaaggcagctatttacaacaacaaatgtctctat-gcactattaaacgacat 13543431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 36418341 - 36418285
Alignment:
Q  201 tgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||| ||||||||  |||||||||||||||||| |||| |||||||||||||||    
T  36418341 tgatgctgatgtagccgttaagttgttgacttgaatcaaaacgttgtcttttaaaag 36418285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 13543548 - 13543489
Alignment:
Q  198 aattgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    |||||||| | ||||| ||  ||||||||||||||| || ||||||||||||||||||||    
T  13543548 aattgatgttgatgtaaccgttaagttgttgacttggatcaaaatgttgtcttttaaaag 13543489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 32459716 - 32459648
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagc 327  Q
    ||||||||| ||| |||||||||||  |||| |||| |||||||| ||||||| || ||||||| ||||    
T  32459716 taatggtcacaaaagatcatttatagggctaaaaaggcaactattgacaacaagaactgtctttttagc 32459648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 42990879 - 42990796
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||| ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42990879 taatagtcataaatgatcttttatagtgctagaaatacaactatttacaacaacaaatgtctttctagcactattaaacgacat 42990796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 1348904 - 1348987
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| |||||||||||| || ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||    
T  1348904 taatggtcacaaatgatcatttgtagtgctagaaagacagctatttaaaacaataaatgtctttctagcactattaaacgacat 1348987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 20184029 - 20184111
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  20184029 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaac-aatgtctttctagcattattaaaagacat 20184111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 8039910 - 8039987
Alignment:
Q  262 tggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacga 339  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  8039910 tggtcacaaatgatcatttatagtgctagaaagacagctatttacaacaacaaatgtctttatagcattattaaacga 8039987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 29590955 - 29590872
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||| |||| ||||||| |||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29590955 taatagtcacaaatgataatttgtagtgctagaaaggcaactatttacaacaacaaatgtctttctagcactattaaatgacat 29590872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 33235297 - 33235380
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| || |||||| |||  ||||||||||||||||||||||||||||||||||||| |||||    
T  33235297 taatggtcacaaatgatcatttatagtgttagaaaaacagttatttacaacaacaaatgtctttctagcactattaaatgacat 33235380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 39958940 - 39959023
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| |||||||||| || || |||||| ||||||||||||||||||||||||||||| ||||    
T  39958940 taatggtcacaaatgatcatttatagtgctagaaagtcagctgtttacaccaacaaatgtctttctagcactattaaacaacat 39959023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 5805301 - 5805378
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaa 336  Q
    ||||||||| ||||||||||||||| ||||| ||||| | |||||||||| |||||||||||||||||||||||||||    
T  5805301 taatggtcacaaatgatcatttatagtgctaaaaagaaagctatttacaataacaaatgtctttctagcactattaaa 5805378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 23679292 - 23679365
Alignment:
Q  269 aaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||||    
T  23679292 aaatgatcatttatagtgctagaaagacaactatttacaataacaaatgcatttctagcactattaaatgacat 23679365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 1441334 - 1441252
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| || || |||||||||||||    
T  1441334 taatggtcacaaatgatcatttatagtgctagaaa-acagctatttacaacaacaaatgtctttttaccattattaaacgacat 1441252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 35215072 - 35215151
Alignment:
Q  262 tggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgaca 341  Q
    |||||| ||||||||||||||| |||||||| |||| ||||||||||| | |||||||||||||||||||||||| ||||    
T  35215072 tggtcacaaatgatcatttatagtgctagaatgacatctatttacaaccataaatgtctttctagcactattaaatgaca 35215151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 27995439 - 27995356
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| | ||||||||||||| |||||||||  || |||||||||||||| || | ||||||||||||||||||||||||    
T  27995439 taatggtcacatatgatcatttatagtgctagaaatgcagctatttacaacaacgaaagcctttctagcactattaaacgacat 27995356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 20366310 - 20366373
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtcttt 322  Q
    ||||||||| |||| |||||||    |||||||||| |||||||||||||||||||||||||||    
T  20366310 taatggtcacaaattatcatttgctgtgctagaaaggcaactatttacaacaacaaatgtcttt 20366373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 5559489 - 5559404
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactattt--acaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| |||| |||||||||| |||||||||| ||  |||||  |||||||||||||  |||||||||| ||||||| ||||    
T  5559489 taatggtcacaaataatcatttatagtgctagaaaggcagatatttttacaacaacaaatgcatttctagcacaattaaacaacat 5559404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 10620112 - 10620054
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatg 317  Q
    ||||||||| ||||||||||||||| |  ||||||| |||||||| |||||||||||||    
T  10620112 taatggtcacaaatgatcatttatagtcttagaaaggcaactattaacaacaacaaatg 10620054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 198
Target Start/End: Complemental strand, 1441430 - 1441399
Alignment:
Q  167 gataaactatttcactgttacccctgctgtca 198  Q
    ||||||||||||||||||||||||||||||||    
T  1441430 gataaactatttcactgttacccctgctgtca 1441399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 198
Target Start/End: Original strand, 27995197 - 27995228
Alignment:
Q  167 gataaactatttcactgttacccctgctgtca 198  Q
    ||||||||||||||||||||||||||||||||    
T  27995197 gataaactatttcactgttacccctgctgtca 27995228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 1286631 - 1286672
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaact 300  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||    
T  1286631 taatggtcacaaatgttcatttatagtgctagaaagacaact 1286672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 17180002 - 17179919
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17180002 taatggtcccaaatgatcatttatagtgctagaaagacaactatttaccacaacaaatgtctttctagcactattaaacgacat 17179919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 24139370 - 24139293
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaa 336  Q
    ||||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24139370 taatggtcacagatgattatttataatgctagaaagacatctatttacaacaacaaatgtctttctagcactattaaa 24139293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 17131979 - 17132047
Alignment:
Q  274 atcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17131979 atcaattatagtgctagaaaggcaactatttacaacaacaaatgtctttctagcactattaaacgacat 17132047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 9902267 - 9902195
Alignment:
Q  270 aatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||    
T  9902267 aatgatcatttatagtgctagaaagacagctatttacaacaataaatgcctttctatcactattaaacgacat 9902195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 28630487 - 28630404
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||| |||| |||||||||||||||| | |||||||  | ||||||||||||||||||||||||||||||||||||||| ||||    
T  28630487 taatagtcacaaatgatcatttataacgttagaaaggtagctatttacaacaacaaatgtctttctagcactattaaacaacat 28630404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 10963001 - 10963081
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||    
T  10963001 taatggtcacaaatgatcatttgtagtgctagaaagacaactatttacaacaac---tgtctttcttgctctattaaacgacat 10963081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 11527790 - 11527873
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||| ||||||| ||||| |||| |||||||||||||||  ||||||||||||| ||| ||| ||||||||    
T  11527790 taatggtcacaaatgataatttatagtgctataaaggcaactatttacaacataaaatgtctttctaacacaattgaacgacat 11527873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 10962919 - 10962975
Alignment:
Q  201 tgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||| ||||||||  ||||||||||||||| || |||||| ||| |||||||||    
T  10962919 tgatgctgatgtagccgttaagttgttgacttggatcaaaatgctgttttttaaaag 10962975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 19681451 - 19681534
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  19681451 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaacaaatgcctttctagcactcttaaacgacat 19681534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 31229629 - 31229546
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||| |||||||||||||    
T  31229629 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaataaatgcatttctagcattattaaacgacat 31229546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 52568060 - 52567980
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacga 339  Q
    ||||||||| ||||||||||||||| || |||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  52568060 taatggtcacaaatgatcatttatagtgatagaaagacaaccatttacaacaataaatgtctttctagcactattgaacga 52567980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 52866119 - 52866192
Alignment:
Q  269 aaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  52866119 aaatgatcatttatagtgctggaaagacaattatttacaacaacaaatgtcgttctaacactattaaacgacat 52866192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 19632104 - 19632027
Alignment:
Q  263 ggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgac 340  Q
    ||||| ||||||||||||||| |||||||||||||  |||||||||||||||||| |||||||| | |||||||||||    
T  19632104 ggtcacaaatgatcatttatagtgctagaaagacatatatttacaacaacaaatgcctttctagtattattaaacgac 19632027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 5387392 - 5387449
Alignment:
Q  285 tgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  5387392 tgctagaaaagcaactatttacaacaacaaatatctttctatcactattaaacgacat 5387449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 8408707 - 8408653
Alignment:
Q  275 tcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcac 329  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||    
T  8408707 tcatttataatgctagaaagacagttatttacaacaacaaatatctttcttgcac 8408653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 30542883 - 30542963
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacga 339  Q
    ||||| ||| |||| |||| ||| | ||||||||||  |  ||||||||||||||||||||||||||||| ||||||||||    
T  30542883 taatgatcacaaataatcacttacagtgctagaaaggtagttatttacaacaacaaatgtctttctagcattattaaacga 30542963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 8408785 - 8408747
Alignment:
Q  219 taagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  8408785 taagttgttgacttggatcaaaatgttgtcttttaaaag 8408747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 19681377 - 19681425
Alignment:
Q  209 atgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||||  ||||||||||||||| || | ||||||||||||||||||    
T  19681377 atgtagccgttaagttgttgacttggatcataatgttgtcttttaaaag 19681425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 42115835 - 42115887
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaa 311  Q
    ||||||||| |||||||||||||||  ||||||||  |||||||| |||||||    
T  42115835 taatggtcacaaatgatcatttatagagctagaaaagcaactattgacaacaa 42115887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 52182103 - 52182055
Alignment:
Q  209 atgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||||  |||||||||||||| ||| |||||| |||||||||||||    
T  52182103 atgtagccgttaagttgttgacttaaatcaaaatgatgtcttttaaaag 52182055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 27893422 - 27893339
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27893422 taatggtcacaaatgatcatttattgtgctagaaagacaactatttacaacaacaaacgtctttctagcactattaaacgacat 27893339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 19080891 - 19080970
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacg 338  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19080891 taatgatcacaaatgatcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctaccactattaaacg 19080970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 20535821 - 20535744
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaa 336  Q
    ||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20535821 taatggtcacaaataatcatttatagtgcgagaaagacaactatttacaacaacaaatgtctttctaacactattaaa 20535744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 11871506 - 11871579
Alignment:
Q  269 aaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  11871506 aaatgatcatttatagtgctagaaatacagctatttacaacaacaaatgtttttctaccactattaaacgacat 11871579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 15506250 - 15506329
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacg 338  Q
    ||||| ||||||||||||||| ||| |||||||||||||  ||||||||||||||||||| ||||| |||||||||||||    
T  15506250 taatgctcataaatgatcattcatagtgctagaaagacagttatttacaacaacaaatgtttttcttgcactattaaacg 15506329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 36196365 - 36196282
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| |||||||| |||| ||||| ||||||||| |||||||| ||||||||||||| |||||    
T  36196365 taatggtcacaaatgatcatttatagtgctagaaggacagctattaacaacaacagatgtctttttagcactattaaatgacat 36196282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 39301578 - 39301661
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| | ||||| ||||||| ||||||||||| |  |||||||||||||||||   |||||||||||||||||||||||    
T  39301578 taatggtcacagatgattatttatagtgctagaaagatagttatttacaacaacaaatacttttctagcactattaaacgacat 39301661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 42117075 - 42117002
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactat 332  Q
    ||||| ||| |||| ||||||||||  ||||||||| || ||||| ||||||| ||||||||||||||| ||||    
T  42117075 taatgatcacaaataatcatttatagggctagaaaggcagctattgacaacaaaaaatgtctttctagccctat 42117002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 30576414 - 30576497
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30576414 taatggtcacaaatgatcagttatagtgctataaagacaactatttacaacaacaaatgtctttatagcactattaaacgacat 30576497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 39701146 - 39701229
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||||||||||||    
T  39701146 taatggtcataagtgatcatttataatgctagaaagacaattgtttacaacaataaatgcctttctagcactattaaacgacat 39701229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 23553739 - 23553666
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactat 332  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23553739 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaagaaatgtctttctagcactat 23553666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 9276749 - 9276825
Alignment:
Q  263 ggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacga 339  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||    
T  9276749 ggtcacaaatgatcatttataatgctagaaagacatctatttacaataacaaatgcctttctaacactattaaacga 9276825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 40553118 - 40553035
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| |||| |||||||||| || ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  40553118 taatggtcacaaattatcatttatattgttagaaaggcaactatttacaacaacaaatgcctttctagcactattaaatgacat 40553035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 8714108 - 8714191
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| |||||||||  || |||||||||||||||||||| ||| | |||||||||||||||||    
T  8714108 taatggtcacaaatgatcatttatagtgctagaaaagcagctatttacaacaacaaatgtttttatggcactattaaacgacat 8714191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 341
Target Start/End: Complemental strand, 4614118 - 4614036
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgaca 341  Q
    ||||||||| |||||||||||||||||| | ||||||||  ||||| ||||||||||||  ||||||||||||||||| ||||    
T  4614118 taatggtcacaaatgatcatttataatgttggaaagacaggtatttgcaacaacaaatgcatttctagcactattaaatgaca 4614036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 25729984 - 25729911
Alignment:
Q  269 aaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||||||   |||||||||||||||||||||||    
T  25729984 aaatgataatttatagtgccagaaagacaactatttacaccaacaaatacatttctagcactattaaacgacat 25729911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 25737470 - 25737397
Alignment:
Q  269 aaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||||||   |||||||||||||||||||||||    
T  25737470 aaatgataatttatagtgccagaaagacaactatttacaccaacaaatacatttctagcactattaaacgacat 25737397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 6236108 - 6236025
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||| ||||||||    ||||||| || |||||||||||||||||||||| |||||||||||||||||| |||||    
T  6236108 taatggtcacaaacgatcatttggtttgctagataggcaactatttacaacaacaaatgcctttctagcactattaaatgacat 6236025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 16197290 - 16197373
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| || | | ||| ||||| |||||||||| |||||  |||||||||||||||||||||||    
T  16197290 taatggtcacaaatgatcatttatagtgattgcaaggcaactttttacaacaataaatgcatttctagcactattaaacgacat 16197373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 10304469 - 10304521
Alignment:
Q  4 tttctgcactagttaagaaagcatttttcttggtgaaatttaatgtgcttgat 56  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  10304469 tttctgcactagttaagaaagcatttttcttagtggaatttgatgtgcttgat 10304521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 44041099 - 44041057
Alignment:
Q  300 tatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  44041099 tatttacagcaacaaatgtctttctagcactattaaacgacat 44041057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 30576340 - 30576388
Alignment:
Q  209 atgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  30576340 atgtagccgttaagttgttgacttgaatcaaaatgttgccttttaaaag 30576388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 5358859 - 5358918
Alignment:
Q  273 gatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactat 332  Q
    |||||||||||  |||| |||||||||| |||||||| | |||||||||||| |||||||    
T  5358859 gatcatttatacggctaaaaagacaactttttacaactagaaatgtctttctggcactat 5358918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 40553203 - 40553144
Alignment:
Q  198 aattgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    |||||||| | || |||||  ||||||||||||||| || ||||||||||||||||||||    
T  40553203 aattgatgttgatatagccgttaagttgttgacttgtatcaaaatgttgtcttttaaaag 40553144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 5358718 - 5358751
Alignment:
Q  167 gataaactatttcactgttacccctgctgtcaat 200  Q
    ||||||||||||| ||||||||||||||||||||    
T  5358718 gataaactatttcgctgttacccctgctgtcaat 5358751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 9276663 - 9276719
Alignment:
Q  201 tgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||| ||||||||||  ||||||||||||||| || |||||| || ||||||||||    
T  9276663 tgatgttcatgtagcctttaagttgttgacttggatcaaaatgatgccttttaaaag 9276719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 31247505 - 31247422
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||| |||| ||||||||| ||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  31247505 taattgtcacaaatgatcaattatagtgctagaaaggcagctatttacaacaacaaatgtctttctagcactattaaacgacat 31247422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 53783138 - 53783221
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||    
T  53783138 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaactacaaatatctttctaacactattaaacaacat 53783221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 3087418 - 3087341
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaa 336  Q
    ||||||| | ||||||||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  3087418 taatggttacaaatgatcatttatagtgctagaaaggtagctatttacaacaacaaatgtctttctagcactattaaa 3087341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 4276399 - 4276481
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  4276399 taatggtcacaaataatcatttatagtgctagaaagacagctatttacaacaacaaatg-cttcctagcactattaaacaacat 4276481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 21376755 - 21376803
Alignment:
Q  209 atgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  21376755 atgtagccgttaagttgttgacttgaattaaaatgttgtcttttaaaag 21376803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 31247304 - 31247363
Alignment:
Q  198 aattgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    |||||||||| ||||||||  ||||||||||||||| || |||| |||||||||||||||    
T  31247304 aattgatgctgatgtagccgttaagttgttgacttggatcaaaacgttgtcttttaaaag 31247363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 198
Target Start/End: Original strand, 4276271 - 4276302
Alignment:
Q  167 gataaactatttcactgttacccctgctgtca 198  Q
    ||||||||||||||||||||||||||||||||    
T  4276271 gataaactatttcactgttacccctgctgtca 4276302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 34254761 - 34254844
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||| |||||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34254761 taatggtcacaaacgatcatttctagtgctagaaagacaactatttacaacaacaaattactttctagcactattaaacgacat 34254844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 8903140 - 8903057
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||||||||||||||||||| | |||||||  ||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  8903140 taatggtcataaatgatcatttatagtcctagaaaagcaactatttgcaacaacaaatgtctttctaacactattcaacgacat 8903057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 10686575 - 10686496
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacg 338  Q
    ||||||||| ||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  10686575 taatggtcacaaatgatcatttgcagtgctagaaagacaactgtttacaacaacaaatgtctttctagcacgattaaacg 10686496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 27351405 - 27351332
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactat 332  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  27351405 taatggtcacaaatgatcatttatagtgctagaaagacagctatttacaacaacaaatgcctttttagcactat 27351332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 37663309 - 37663391
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||  |||||||||||||||||| ||||    
T  37663309 taatggtcacaaatgatcatttatagtgctagaaagataactatttacaacaa-aaatgcatttctagcactattaaacaacat 37663391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 4772460 - 4772388
Alignment:
Q  270 aatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||||||||||||| || ||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  4772460 aatgatcatttatagtggtagaaagacaactattcgcaataacaaatgtctttctagcactattaaacaacat 4772388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 48352557 - 48352474
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| ||||||||| ||| || ||||||||| |||||| |||| |||||||||||||| ||||    
T  48352557 taatggtcacaaatgatcatttatagtgctagaaatacacctttttacaacaccaaatgcctttatagcactattaaacaacat 48352474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 29418805 - 29418873
Alignment:
Q  274 atcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||  |||||| ||||||||||||||||    
T  29418805 atcatttatagtgctagaaagacaattatttacaacagcaaatgcatttctatcactattaaacgacat 29418873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 4030590 - 4030543
Alignment:
Q  290 gaaagacaactatttacaacaacaaatgtctttctagcactattaaac 337  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||    
T  4030590 gaaagacaactatttacaacaaaaaatgcatttctagcactattaaac 4030543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 49650746 - 49650802
Alignment:
Q  201 tgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||| ||||||||  ||||||||||| ||| || ||||||||||||||||||||    
T  49650746 tgatgctgatgtagccgttaagttgttgatttggatcaaaatgttgtcttttaaaag 49650802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 27351257 - 27351294
Alignment:
Q  223 ttgttgacttgaattaaaatgttgtcttttaaaagata 260  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  27351257 ttgttgacttgaatcaaaatgttgccttttaaaagata 27351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 10686377 - 10686433
Alignment:
Q  201 tgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||| ||||||||  ||||||||||||||| || ||||| ||| ||||||||||    
T  10686377 tgatgctgatgtagccgttaagttgttgacttgtatcaaaatattgccttttaaaag 10686433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 27351487 - 27351431
Alignment:
Q  201 tgatgctcatgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||| ||||||||  ||||||||||||||  || |||||||||| |||||||||    
T  27351487 tgatgctgatgtagccgttaagttgttgactttgatcaaaatgttgttttttaaaag 27351431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 9648 - 9730
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||||| ||||||||||||||| || | |||||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  9648 taatggtcacaaatgatcatttatagtgtt-gaaagacaactatttacaacaacaaatgtcttttcaacactattaaacgacat 9730  T

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Target: scaffold0070 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 28816 - 28889
Alignment:
Q  269 aaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||| ||||||||| | ||||||||||| |||||||||||||||||||  |||  ||||||||||||||||||    
T  28816 aaatggtcatttatagtactagaaagacagctatttacaacaacaaatgcattttgagcactattaaacgacat 28889  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 28733 - 28781
Alignment:
Q  209 atgtagccactaagttgttgacttgaattaaaatgttgtcttttaaaag 257  Q
    ||||||||| ||||||||||||||| || | ||||||| ||||||||||    
T  28733 atgtagccattaagttgttgacttggatcacaatgttgccttttaaaag 28781  T

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Target: scaffold0746 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 342
Target Start/End: Complemental strand, 379 - 314
Alignment:
Q  277 atttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacat 342  Q
    ||||||| ||||||||||||| ||||||||||| |||||||  |||  ||||||||||||||||||    
T  379 atttatagtgctagaaagacagctatttacaaccacaaatgcattttgagcactattaaacgacat 314  T

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Target: scaffold0746; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 523 - 490
Alignment:
Q  167 gataaactatttcactgttacccctgctgtcaat 200  Q
    ||||||||||||||||||||||||||| ||||||    
T  523 gataaactatttcactgttacccctgccgtcaat 490  T

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Target: scaffold0374 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 16469 - 16417
Alignment:
Q  259 taatggtcataaatgatcatttataatgctagaaagacaactatttacaacaa 311  Q
    |||| |||| |||||||||||||||| ||||||||| || ||||| |||||||    
T  16469 taatagtcacaaatgatcatttataaggctagaaaggcagctattgacaacaa 16417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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