View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21472_high_6 (Length: 494)

Name: NF21472_high_6
Description: NF21472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21472_high_6
NF21472_high_6
[»] chr7 (41 HSPs)
chr7 (1-486)||(35013763-35014248)
chr7 (332-477)||(24139224-24139369)
chr7 (388-491)||(16732132-16732235)
chr7 (388-491)||(17710266-17710369)
chr7 (388-491)||(24251638-24251741)
chr7 (229-311)||(46095436-46095518)
chr7 (362-491)||(9328461-9328590)
chr7 (399-491)||(44481286-44481378)
chr7 (226-284)||(2842095-2842153)
chr7 (399-491)||(29200851-29200943)
chr7 (388-491)||(16098689-16098792)
chr7 (329-491)||(17877597-17877759)
chr7 (388-470)||(30493495-30493577)
chr7 (329-491)||(33224386-33224548)
chr7 (344-402)||(43893790-43893848)
chr7 (334-491)||(22289440-22289597)
chr7 (224-284)||(33584567-33584627)
chr7 (228-284)||(34001902-34001958)
chr7 (228-263)||(30462668-30462703)
chr7 (228-311)||(37496413-37496496)
chr7 (228-278)||(44604526-44604576)
chr7 (388-491)||(3275233-3275337)
chr7 (228-284)||(9602869-9602925)
chr7 (228-284)||(9830440-9830496)
chr7 (228-284)||(17266035-17266091)
chr7 (235-275)||(25270803-25270843)
chr7 (228-284)||(25778752-25778808)
chr7 (228-284)||(29257555-29257611)
chr7 (228-283)||(29434624-29434679)
chr7 (228-284)||(2849263-2849319)
chr7 (228-284)||(3667920-3667976)
chr7 (228-284)||(14648962-14649018)
chr7 (232-284)||(16870810-16870862)
chr7 (229-273)||(24171744-24171788)
chr7 (228-284)||(27234511-27234567)
chr7 (228-284)||(34064223-34064279)
chr7 (228-284)||(36070113-36070169)
chr7 (228-284)||(37264321-37264377)
chr7 (228-284)||(37490661-37490717)
chr7 (223-287)||(44341584-44341648)
chr7 (228-284)||(46288474-46288530)
[»] chr1 (45 HSPs)
chr1 (361-491)||(17371647-17371777)
chr1 (329-470)||(4395378-4395519)
chr1 (228-284)||(32587773-32587829)
chr1 (408-491)||(44527452-44527535)
chr1 (362-491)||(5609538-5609667)
chr1 (224-284)||(28839343-28839403)
chr1 (364-491)||(48166426-48166553)
chr1 (223-284)||(27831849-27831910)
chr1 (228-309)||(34877109-34877190)
chr1 (362-491)||(48949583-48949712)
chr1 (228-284)||(8327725-8327781)
chr1 (228-284)||(13500773-13500829)
chr1 (228-284)||(17342836-17342892)
chr1 (228-284)||(21304392-21304448)
chr1 (228-284)||(33149281-33149337)
chr1 (228-284)||(40019767-40019823)
chr1 (224-275)||(11324252-11324303)
chr1 (224-275)||(11482273-11482324)
chr1 (394-491)||(25682850-25682947)
chr1 (227-284)||(46363455-46363512)
chr1 (228-284)||(2886179-2886235)
chr1 (228-284)||(7785318-7785374)
chr1 (228-284)||(10587625-10587681)
chr1 (228-284)||(29225761-29225817)
chr1 (228-284)||(51749227-51749283)
chr1 (223-274)||(914750-914801)
chr1 (388-470)||(2885447-2885528)
chr1 (416-486)||(14485214-14485284)
chr1 (388-486)||(51113519-51113617)
chr1 (231-280)||(2571374-2571423)
chr1 (228-284)||(948631-948687)
chr1 (228-284)||(3555599-3555655)
chr1 (228-284)||(3718893-3718949)
chr1 (228-284)||(5040619-5040675)
chr1 (228-284)||(24131444-24131500)
chr1 (228-284)||(28277082-28277138)
chr1 (228-284)||(29756186-29756242)
chr1 (228-284)||(34813925-34813981)
chr1 (228-284)||(37925290-37925346)
chr1 (228-284)||(40061817-40061873)
chr1 (228-284)||(45889292-45889348)
chr1 (228-284)||(46496026-46496082)
chr1 (228-284)||(46536348-46536404)
chr1 (228-284)||(50267482-50267538)
chr1 (228-284)||(52382430-52382486)
[»] chr2 (37 HSPs)
chr2 (325-491)||(88758-88924)
chr2 (228-284)||(23684967-23685023)
chr2 (228-284)||(28301442-28301498)
chr2 (329-491)||(34695730-34695892)
chr2 (329-491)||(34718142-34718304)
chr2 (325-486)||(12130460-12130621)
chr2 (362-491)||(9710154-9710283)
chr2 (414-491)||(18344205-18344282)
chr2 (228-284)||(435121-435177)
chr2 (228-284)||(4794581-4794637)
chr2 (224-284)||(8550685-8550745)
chr2 (228-284)||(37247927-37247983)
chr2 (228-284)||(41436087-41436143)
chr2 (228-317)||(3199906-3199992)
chr2 (228-303)||(10069609-10069684)
chr2 (388-477)||(11291949-11292038)
chr2 (232-284)||(13718852-13718904)
chr2 (228-284)||(26273767-26273823)
chr2 (228-284)||(44424306-44424362)
chr2 (236-303)||(12524309-12524376)
chr2 (228-270)||(7648923-7648965)
chr2 (234-284)||(13538312-13538362)
chr2 (228-262)||(33751469-33751503)
chr2 (228-284)||(13375232-13375289)
chr2 (228-273)||(28108429-28108474)
chr2 (228-284)||(5212001-5212057)
chr2 (228-284)||(6213893-6213949)
chr2 (228-284)||(7650018-7650074)
chr2 (228-284)||(7931539-7931595)
chr2 (228-284)||(8031749-8031805)
chr2 (228-284)||(11726765-11726821)
chr2 (228-284)||(14384321-14384377)
chr2 (228-284)||(19515889-19515945)
chr2 (228-284)||(31592558-31592614)
chr2 (228-284)||(39095639-39095695)
chr2 (228-284)||(43427129-43427185)
chr2 (224-284)||(44024722-44024782)
[»] chr8 (44 HSPs)
chr8 (325-491)||(13415222-13415388)
chr8 (339-491)||(40588566-40588718)
chr8 (362-491)||(477915-478044)
chr8 (325-469)||(28315328-28315472)
chr8 (224-284)||(27987662-27987722)
chr8 (224-284)||(28044964-28045024)
chr8 (388-491)||(33642649-33642752)
chr8 (388-470)||(9496998-9497080)
chr8 (228-284)||(4274342-4274398)
chr8 (228-284)||(28802775-28802831)
chr8 (228-284)||(39171551-39171607)
chr8 (228-284)||(42412426-42412482)
chr8 (228-284)||(42558624-42558680)
chr8 (228-311)||(139030-139113)
chr8 (399-470)||(7127443-7127514)
chr8 (228-311)||(10728938-10729021)
chr8 (228-283)||(45197619-45197674)
chr8 (388-470)||(598122-598204)
chr8 (388-491)||(3606622-3606727)
chr8 (223-284)||(5423207-5423268)
chr8 (228-281)||(5962519-5962572)
chr8 (402-491)||(11870463-11870552)
chr8 (422-491)||(23854131-23854200)
chr8 (228-284)||(2195476-2195532)
chr8 (228-284)||(5392057-5392113)
chr8 (224-284)||(11637144-11637204)
chr8 (228-284)||(27868368-27868424)
chr8 (228-284)||(31410651-31410707)
chr8 (329-481)||(36194447-36194599)
chr8 (235-284)||(23764981-23765030)
chr8 (246-283)||(27571578-27571615)
chr8 (228-273)||(32967331-32967376)
chr8 (228-281)||(44615411-44615464)
chr8 (228-284)||(1230405-1230461)
chr8 (223-263)||(5918912-5918952)
chr8 (228-284)||(7258410-7258466)
chr8 (228-284)||(8418345-8418401)
chr8 (228-284)||(14689968-14690024)
chr8 (228-284)||(14748749-14748805)
chr8 (224-284)||(15020676-15020736)
chr8 (223-287)||(20245259-20245323)
chr8 (223-287)||(20247838-20247902)
chr8 (228-284)||(39998171-39998227)
chr8 (228-284)||(45537415-45537471)
[»] chr4 (47 HSPs)
chr4 (325-491)||(21321729-21321895)
chr4 (399-491)||(49951512-49951604)
chr4 (362-485)||(18442006-18442129)
chr4 (362-491)||(32576907-32577036)
chr4 (388-491)||(26422487-26422590)
chr4 (388-491)||(51259414-51259517)
chr4 (226-284)||(30568665-30568723)
chr4 (399-491)||(37245748-37245840)
chr4 (399-491)||(41835207-41835299)
chr4 (388-491)||(56065832-56065935)
chr4 (362-491)||(2065052-2065181)
chr4 (402-491)||(51734871-51734960)
chr4 (228-284)||(22872431-22872487)
chr4 (402-470)||(29655565-29655633)
chr4 (228-284)||(37309706-37309762)
chr4 (228-284)||(38319919-38319975)
chr4 (228-284)||(42185839-42185895)
chr4 (224-284)||(47277725-47277785)
chr4 (228-284)||(47846907-47846963)
chr4 (388-491)||(8754348-8754451)
chr4 (228-303)||(49448849-49448924)
chr4 (230-275)||(39976442-39976487)
chr4 (224-281)||(42024247-42024304)
chr4 (224-273)||(43335077-43335126)
chr4 (228-284)||(17237051-17237107)
chr4 (399-491)||(23095413-23095505)
chr4 (399-491)||(28426382-28426474)
chr4 (224-284)||(29644359-29644419)
chr4 (228-284)||(35998160-35998216)
chr4 (228-284)||(38160195-38160251)
chr4 (228-284)||(41710187-41710243)
chr4 (399-491)||(49119296-49119388)
chr4 (228-284)||(49306595-49306651)
chr4 (228-284)||(54729527-54729582)
chr4 (229-284)||(46958731-46958786)
chr4 (228-282)||(4360453-4360507)
chr4 (329-431)||(10575275-10575377)
chr4 (230-284)||(28974316-28974370)
chr4 (228-281)||(3686019-3686072)
chr4 (228-281)||(27977155-27977208)
chr4 (235-284)||(53848661-53848710)
chr4 (228-284)||(12619696-12619752)
chr4 (228-284)||(36047143-36047199)
chr4 (228-284)||(38976999-38977055)
chr4 (228-284)||(39052944-39053000)
chr4 (228-284)||(42544217-42544273)
chr4 (228-284)||(55360391-55360447)
[»] chr3 (38 HSPs)
chr3 (329-491)||(34497198-34497360)
chr3 (362-491)||(53497231-53497360)
chr3 (327-491)||(48227567-48227731)
chr3 (339-438)||(15310817-15310916)
chr3 (364-491)||(42340138-42340265)
chr3 (388-466)||(26046912-26046990)
chr3 (329-491)||(27608729-27608891)
chr3 (228-311)||(53876452-53876535)
chr3 (362-491)||(647029-647158)
chr3 (386-491)||(31341608-31341713)
chr3 (228-284)||(15082011-15082066)
chr3 (228-284)||(26134746-26134802)
chr3 (228-284)||(27668370-27668426)
chr3 (228-284)||(39329793-39329849)
chr3 (231-284)||(46786024-46786077)
chr3 (394-470)||(2615703-2615779)
chr3 (228-284)||(5245420-5245476)
chr3 (228-284)||(9218153-9218209)
chr3 (228-284)||(15280613-15280669)
chr3 (362-490)||(19117579-19117707)
chr3 (228-284)||(39866596-39866652)
chr3 (228-284)||(46194249-46194305)
chr3 (228-284)||(52325185-52325241)
chr3 (408-491)||(55199710-55199793)
chr3 (228-282)||(17777039-17777093)
chr3 (228-282)||(19078340-19078394)
chr3 (228-282)||(26832079-26832133)
chr3 (228-281)||(32023147-32023200)
chr3 (230-275)||(36097707-36097752)
chr3 (223-260)||(39851862-39851899)
chr3 (228-265)||(40716801-40716838)
chr3 (228-284)||(1923098-1923154)
chr3 (408-468)||(2121303-2121363)
chr3 (228-284)||(3862215-3862271)
chr3 (325-389)||(15310923-15310987)
chr3 (228-284)||(43639559-43639615)
chr3 (228-280)||(44234098-44234150)
chr3 (228-284)||(47496177-47496233)
[»] chr5 (37 HSPs)
chr5 (388-491)||(4268298-4268401)
chr5 (329-491)||(20205154-20205316)
chr5 (339-486)||(25731012-25731159)
chr5 (223-286)||(43573009-43573072)
chr5 (362-491)||(11375381-11375510)
chr5 (228-284)||(17242998-17243054)
chr5 (388-491)||(22767158-22767261)
chr5 (328-491)||(27292633-27292795)
chr5 (229-284)||(42211342-42211397)
chr5 (228-284)||(858343-858399)
chr5 (224-284)||(6173024-6173084)
chr5 (228-284)||(35334570-35334626)
chr5 (228-284)||(39183671-39183727)
chr5 (388-486)||(23075036-23075134)
chr5 (414-491)||(15988660-15988737)
chr5 (228-284)||(11099521-11099577)
chr5 (228-284)||(16283631-16283687)
chr5 (228-284)||(35585660-35585716)
chr5 (228-284)||(36446731-36446787)
chr5 (339-486)||(12717713-12717860)
chr5 (224-263)||(13422417-13422456)
chr5 (435-486)||(26076484-26076535)
chr5 (224-262)||(17741239-17741277)
chr5 (226-284)||(25344782-25344840)
chr5 (223-284)||(4475249-4475310)
chr5 (228-308)||(5072958-5073038)
chr5 (228-284)||(6610845-6610901)
chr5 (228-284)||(8369740-8369796)
chr5 (228-284)||(13087785-13087841)
chr5 (228-284)||(13135761-13135817)
chr5 (228-284)||(15564932-15564988)
chr5 (228-284)||(15898199-15898255)
chr5 (228-284)||(20189900-20189956)
chr5 (229-284)||(22982956-22983008)
chr5 (228-284)||(31090312-31090368)
chr5 (228-284)||(36469138-36469194)
chr5 (228-284)||(39212595-39212651)
[»] chr6 (17 HSPs)
chr6 (224-311)||(117083-117170)
chr6 (329-491)||(15605820-15605982)
chr6 (362-491)||(14680361-14680490)
chr6 (399-491)||(11731565-11731657)
chr6 (414-486)||(15053086-15053158)
chr6 (388-491)||(34104350-34104453)
chr6 (228-284)||(26356277-26356333)
chr6 (419-491)||(28107338-28107410)
chr6 (224-284)||(34803750-34803810)
chr6 (228-283)||(2362364-2362419)
chr6 (228-281)||(30063995-30064048)
chr6 (228-269)||(33109381-33109422)
chr6 (228-284)||(2310331-2310387)
chr6 (228-284)||(14312691-14312747)
chr6 (228-284)||(15321268-15321324)
chr6 (228-284)||(15371906-15371962)
chr6 (386-470)||(27443153-27443237)
[»] scaffold0446 (1 HSPs)
scaffold0446 (388-491)||(389-492)
[»] scaffold0028 (1 HSPs)
scaffold0028 (228-284)||(26621-26677)
[»] scaffold0654 (1 HSPs)
scaffold0654 (228-260)||(2725-2757)
[»] scaffold0001 (1 HSPs)
scaffold0001 (228-284)||(394786-394842)
[»] scaffold0198 (1 HSPs)
scaffold0198 (399-470)||(20378-20449)
[»] scaffold0252 (1 HSPs)
scaffold0252 (365-426)||(13383-13444)
[»] scaffold0221 (2 HSPs)
scaffold0221 (228-281)||(8895-8948)
scaffold0221 (228-284)||(10834-10890)
[»] scaffold0034 (1 HSPs)
scaffold0034 (228-273)||(98833-98878)
[»] scaffold0685 (1 HSPs)
scaffold0685 (228-284)||(6443-6499)
[»] scaffold0086 (1 HSPs)
scaffold0086 (228-284)||(5826-5882)
[»] scaffold0003 (1 HSPs)
scaffold0003 (386-470)||(44124-44208)


Alignment Details
Target: chr7 (Bit Score: 404; Significance: 0; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 1 - 486
Target Start/End: Complemental strand, 35014248 - 35013763
Alignment:
Q  1 tgtgtttacactttgagtgcacatgttcaaacacaaagatgtgtaaatctcgaggagcaaaattgaatattaaattgcatcggaggtccatcgaaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35014248 tgtgtttacactttgagtgcacatgttcaaacacaaagatgtgtaaatcttgaggagcaaaattgaatattaagttgcatcggaggtccatcgaaaattt 35014149  T
Q  101 actttaaaggtaatagttttgaccacgcactttaaaactctcttatannnnnnncttactatccgaaatctatgttatattctattaatatttcgaacaa 200  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||    
T  35014148 actttaaaggtaatagttttgaccacacacttcaaaactctcttatatttttttcttactattcgaaatctatgttatattctattaatatttcgaacaa 35014049  T
Q  201 gtgagtcaagtgacaatttcatcactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaa 300  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35014048 gtgggtcaagtgacaatttcatcactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacaacaaatgcacaa 35013949  T
Q  301 atatttaacaatgacacnnnnnnnaccgaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcga 400  Q
    |||||| |||||| |||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35013948 atatttgacaatggcactttttttaccgaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcga 35013849  T
Q  401 ctagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35013848 ctagccgaagaataggtcgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 35013763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 477
Target Start/End: Complemental strand, 24139369 - 24139224
Alignment:
Q  332 caaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaag 431  Q
    |||||| ||||| |||||||||| |   | ||||||||||| | ||||||  | | |||||  ||| |||||||| ||||| ||||||||||||||||||    
T  24139369 caaaattaactattatcattaatcaaccaatgttcaatacaagaaggataagaataaaaaatgcggtgactagcccaagaacaggccgccctagctaaag 24139270  T
Q  432 tacgagcgaccatatttgcttgtctcctaataaacttcaacttgaa 477  Q
    || |||| ||||| || ||||||||||||| |||||||| ||||||    
T  24139269 tatgagcaaccatgttcgcttgtctcctaacaaacttcaccttgaa 24139224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 16732235 - 16732132
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| ||||| || ||||||||||||||||| |||| ||||| || ||||||||||||| |||||||| || ||| ||||||||     
T  16732235 aaaaatacggtgactagcccaagaacagtccgccctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgt 16732136  T
Q  488 aaag 491  Q
    ||||    
T  16732135 aaag 16732132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 17710369 - 17710266
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| ||||| || ||||||||||||||||| |||| ||||| || ||||||||||||| |||||||| || ||| ||||||||     
T  17710369 aaaaatacggtgactagcccaagaacagtccgccctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgt 17710270  T
Q  488 aaag 491  Q
    ||||    
T  17710269 aaag 17710266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 24251741 - 24251638
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||  ||||| |||||||||||||||||||| |||| ||||| || ||||||||||||| |||||||| || ||| ||||||||     
T  24251741 aaaaatacggtgactagctcaagaacaggccgccctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgt 24251642  T
Q  488 aaag 491  Q
    ||||    
T  24251641 aaag 24251638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 46095518 - 46095436
Alignment:
Q  229 aattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaacaa 311  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||   ||  ||||||||||||||||||||    
T  46095518 aattaatactacttttatcactctcaattcaatatatttcactttgcatttatgatagtagagaatgcacaaatatttaacaa 46095436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 9328461 - 9328590
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | |||||| || | ||||| |||| |||||||| ||||||||| || | ||||||||||| |||| ||||| || |||||||||||||    
T  9328461 tgttcaatacaagaaggataaaaattaaaaatacggtgactagcccaagaataggacgtcgtagctaaagtatgagcaaccatgttcgcttgtctcctaa 9328560  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     ||||||||  | ||| |||||||| ||||    
T  9328561 caaacttcacatcgaagttggaatgtaaag 9328590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 491
Target Start/End: Complemental strand, 44481378 - 44481286
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||| |||||||||||||||||||| |||| ||||| || ||||||||||||| |||||||| || ||| ||| |||| ||||    
T  44481378 gactagcccaagaacaggccgccctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttgaaatgtaaag 44481286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 2842153 - 2842095
Alignment:
Q  226 tataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||    
T  2842153 tataattaatactactttcatcactctaaattcaatatatttcactttgcatttatgat 2842095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 29200851 - 29200943
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||| || ||||||||||||||||| |||| ||||| || | ||||||||||| |||||||| || ||| |||||||| ||||    
T  29200851 gactagcccaagaacagaccgccctagctaaagtatgagcaaccatgttcgtttgtctcctaacaaacttcacctcgaagttggaatgtaaag 29200943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 16098792 - 16098689
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||  | ||| ||||||||||||||||| || |||| ||||| || ||||||||| ||| |||||||| |||||| ||||||||     
T  16098792 aaaaatacggtgactagctcatgaacaggccgccctagctaaaatatgagcaaccatgttcgcttgtctcataacaaacttcaccttgaagttggaatgt 16098693  T
Q  488 aaag 491  Q
    ||||    
T  16098692 aaag 16098689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 491
Target Start/End: Complemental strand, 17877759 - 17877597
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| ||||||||||||   | ||||||||||| | |||||| || | ||||| |||| |||||||| || || | |||| |||| |||    
T  17877759 aagcaaagttaactattatcattaattaatcaatgttcaatacaagaaggataaaaataaaaaatacggtgactagcccaataacatgccgtcctaccta 17877660  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||| |||| |||||  | ||||||||| ||| |||||||| || ||||||| |||| ||||    
T  17877659 aagtatgagcaaccatggtcgcttgtctcataacaaacttcacctcgaaattgaaatgtaaag 17877597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 30493495 - 30493577
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    ||||| |||| |||||||| ||||| || ||||||||||||||||| || | ||||| |||| ||||||||||| ||||||||    
T  30493495 aaaaatacggtgactagcccaagaacagaccgccctagctaaagtatgaacaaccatgtttggttgtctcctaacaaacttca 30493577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 491
Target Start/End: Original strand, 33224386 - 33224548
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| |||||||||| |   | ||||||||||| | | ||||  | ||||||| |||| |||||||| ||||| |||| ||||||| ||    
T  33224386 aagcaaagttaactattatcattaatcaaccagtgttcaatacaagaatgataagaatcaaaaatacggtgactagcccaagaacaggctgccctagata 33224485  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |  || |||| | ||| || ||||||||||||| |||||||| |||||| |||||||| ||||    
T  33224486 agttatgagcaatcatgttcgcttgtctcctaacaaacttcaccttgaagttggaatgtaaag 33224548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 43893790 - 43893848
Alignment:
Q  344 atatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgact 402  Q
    |||| |||||||| | ||||||||||||||| |||||||||||||||||||||| ||||    
T  43893790 atataattaattaaacattgttcaatacatgaaggatagaactcaaaaacacggagact 43893848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 491
Target Start/End: Complemental strand, 22289597 - 22289440
Alignment:
Q  334 aaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagta 433  Q
    |||||||||| |||||||||| |  || ||||||||| | | |||||| || | ||||| ||||  |||||   ||||| ||||||||||||||||  ||    
T  22289597 aaatcaactattatcattaatcaactagtgttcaatataagaaggataaaaataaaaaatacggtaactagttcaagaacaggccgccctagctaagcta 22289498  T
Q  434 cgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
     |||| ||||| || ||||||||||||| |||| ||| || ||| |||||||| ||||    
T  22289497 tgagcaaccatgttcgcttgtctcctaacaaacatcacctcgaagttggaatgtaaag 22289440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 33584567 - 33584627
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| ||||||||||| ||||||||||| || || ||||| ||||||||    
T  33584567 actataattaatactactttcatcactcccaattcaatatattccattttgcatttatgat 33584627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 34001958 - 34001902
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||| ||||||||||||| || |||||||| ||||||||    
T  34001958 taattaatactactttcatcaccctcaattcaatatattccactttgcatttatgat 34001902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 30462668 - 30462703
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatat 263  Q
    ||||||||||||||||||||||||||||||||||||    
T  30462668 taattaatactaatttcatcactctcaattcaatat 30462703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 37496496 - 37496413
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaacaa 311  Q
    |||||||||||| ||||||||||||||||||||||| ||  ||||| | |||||||| | |   |||||||||||| |||||||    
T  37496496 taattaatactactttcatcactctcaattcaatatattctactttacatttatgataagaaagaatgcacaaatacttaacaa 37496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 44604576 - 44604526
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttt 278  Q
    |||||||||||| ||||||||||||||| ||||||| || |||||||||||    
T  44604576 taattaatactactttcatcactctcaactcaatatattccactttgcttt 44604526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 3275337 - 3275233
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaag-tacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
    ||||| |||| |||||||| ||||| |||||||||||||| ||| || || | ||||| || ||||||||| ||| |||||||| || ||| ||||||||    
T  3275337 aaaaatacggtgactagcctaagaacaggccgccctagcttaagctatgatcaaccatgttcgcttgtctcttaacaaacttcacctcgaagttggaatg 3275238  T
Q  487 caaag 491  Q
     ||||    
T  3275237 taaag 3275233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 9602869 - 9602925
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||||||| ||||||||    
T  9602869 taattaatactactttcaccactctcaattcaatatgttctactttgcatttatgat 9602925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 9830440 - 9830496
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||||||| ||||||||    
T  9830440 taattaatactactttcaccactctcaattcaatatgttctactttgcatttatgat 9830496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 17266035 - 17266091
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||| |||||| |||| ||||||||||| ||||||||    
T  17266035 taattaatattattttcatcactcccaattcgatatatttcactttgcatttatgat 17266091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 25270803 - 25270843
Alignment:
Q  235 tactaatttcatcactctcaattcaatatttttcactttgc 275  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  25270803 tactaatttcatcactctgatttcaatatttttcactttgc 25270843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 25778752 - 25778808
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||  ||||||||||| ||| ||||||| ||||||||    
T  25778752 taattaatactactttcatcacttccaattcaatatattttactttgcatttatgat 25778808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 29257555 - 29257611
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||| ||||||||||| || |||||||| ||||||||    
T  29257555 taattaatattactttcatcactcccaattcaatatattccactttgcatttatgat 29257611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 29434679 - 29434624
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatga 283  Q
    |||||||||||| |||||||| || ||||||||||| || |||||||| |||||||    
T  29434679 taattaatactactttcatcattcacaattcaatatattccactttgcatttatga 29434624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 2849263 - 2849319
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||||| | ||||||||    
T  2849263 taattaatactactttcaccactctcaattcaatatattctactttacatttatgat 2849319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 3667976 - 3667920
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| ||  ||||| | ||||||||    
T  3667976 taattaatattactttcatcactctcaattcaatatattctactttacatttatgat 3667920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 14649018 - 14648962
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| ||  || |||| ||||||||    
T  14649018 taattaatattactttcatcactctcaattcaatatattctaccttgcatttatgat 14648962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 16870862 - 16870810
Alignment:
Q  232 taatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||||||  ||| ||| ||| ||||||||||| ||||||||    
T  16870862 taatactaatttcatcacttccaactcactatatttcactttgcatttatgat 16870810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 24171788 - 24171744
Alignment:
Q  229 aattaatactaatttcatcactctcaattcaatatttttcacttt 273  Q
    |||||||| ||||||||||||||| |||| ||||| |||||||||    
T  24171788 aattaatattaatttcatcactctaaatttaatatatttcacttt 24171744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 27234511 - 27234567
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||| ||||| ||||  ||||| ||||||||    
T  27234511 taattaatactattttcatcactcacaatttaatatatttcgttttgcatttatgat 27234567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 34064223 - 34064279
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| ||  ||||| | ||||||||    
T  34064223 taattaatattactttcatcactctcaattcaatatattctactttacatttatgat 34064279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 36070113 - 36070169
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||| ||| ||  ||||| | ||||||||    
T  36070113 taattaatactactttcatcactctcaattcagtatattctactttacgtttatgat 36070169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 37264321 - 37264377
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||| ||||||||||| ||  ||||||| ||||||||    
T  37264321 taattaatactactttcaccactcccaattcaatatattctactttgcatttatgat 37264377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 37490717 - 37490661
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||| |||||| |||||||||||| || |||||||| ||||||||    
T  37490717 taattaatattacttttatcactatcaattcaatatattccactttgcatttatgat 37490661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 44341584 - 44341648
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcac 287  Q
    |||||||||||||| |||||||| |  |||||||||||||| ||||| ||||  ||||| |||||    
T  44341584 cactataattaatattaatttcacccgtctcaattcaatatctttcattttgtatttataatcac 44341648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 46288530 - 46288474
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||| ||| |||||||||||| || |||||||| || |||||    
T  46288530 taattaatactactttcataactttcaattcaatatattccactttgcattaatgat 46288474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 361 - 491
Target Start/End: Complemental strand, 17371777 - 17371647
Alignment:
Q  361 ttgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctccta 460  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||  ||||| | |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  17371777 ttgttcaatacatggaggatataactcaaaaatacggtgactagctcaagaacatgccgccctagctaaggtatgagcgaccatattcgcttgtctccta 17371678  T
Q  461 ataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||||| |||||| |||||||| ||||    
T  17371677 ataaacttcaccttgaagttggaatgtaaag 17371647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 470
Target Start/End: Complemental strand, 4395519 - 4395378
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| |||| ||||| |  || ||||||||||| | ||||||  | | ||||| |||| |||||||| ||||| |||||||||||||||    
T  4395519 aagcaaatttaactattatcgttaatcaactaatgttcaatacaagaaggataagaataaaaaatacggtgactagcccaagaacaggccgccctagcta 4395420  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    ||||| |||| ||||| || ||||||||||||| ||||||||    
T  4395419 aagtatgagcaaccatgttcgcttgtctcctaacaaacttca 4395378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 32587773 - 32587829
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  32587773 taattaataataatttcatcactctcaattcaatatatttcactttgcatttatgat 32587829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 491
Target Start/End: Complemental strand, 44527535 - 44527452
Alignment:
Q  408 aagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||| |||||||||||| ||||||| ||||  |||| || |||||||||||||||||||||| |||||| |||||||| ||||    
T  44527535 aagaacaggccgccctagttaaagtatgagcagccatgttcgcttgtctcctaataaacttcaccttgaagttggaatgtaaag 44527452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 5609667 - 5609538
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | ||||||  | | ||||| || | |||||||| ||||| | |||||||||||||| ||| |||| ||||| || |||||||||||||    
T  5609667 tgttcaatacaagaaggataagaataaaaaatacagtgactagcccaagaacatgccgccctagctaatgtatgagcaaccatgttcgcttgtctcctaa 5609568  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     |||||||| || ||| |||||||| ||||    
T  5609567 caaacttcacctcgaagttggaatgtaaag 5609538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 28839343 - 28839403
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||    
T  28839343 actataattaatactactttcatcactcccaattcaatatattccactttgcatttatgat 28839403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 491
Target Start/End: Complemental strand, 48166553 - 48166426
Alignment:
Q  364 ttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaata 463  Q
    ||||||||| | |||||| || ||||| | |||| |||||||| |||| |||||||| |||| |||||||||||| | ||| || | |||| |||||| |    
T  48166553 ttcaatacaagaaggataaaaatcaaagatacggtgactagcccaagagtaggccgctctagttaaagtacgagcaatcatgttcgtttgtttcctaaca 48166454  T
Q  464 aacttcaacttgaaattggaatgcaaag 491  Q
    ||||||| |||||| ||| |||| ||||    
T  48166453 aacttcatcttgaagttgaaatgtaaag 48166426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 27831849 - 27831910
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||| |||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||    
T  27831849 cactctaattaatactactttcatcactcccaattcaatatcttccactttgcatttatgat 27831910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 34877190 - 34877109
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaac 309  Q
    ||||||||| || ||||||||||| ||||||||||| ||  ||||||| |||||||| | || |||||||| ||||||||||    
T  34877190 taattaatattattttcatcactcacaattcaatatattcaactttgcatttatgataatagaaaatgcacgaatatttaac 34877109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 48949583 - 48949712
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | ||||||  | | ||||| |||| |||||||| ||||| |||| |||||||||||  || |||  ||||| || |||||||||||||    
T  48949583 tgttcaatacaagaaggataagaataaaaaatacggtgactagcccaagaacaggctgccctagctaagctatgagtaaccatgttcgcttgtctcctaa 48949682  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     |||||||| || ||| |||||||| ||||    
T  48949683 caaacttcacctcgaagttggaatgtaaag 48949712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 8327725 - 8327781
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| || || ||||| ||||||||    
T  8327725 taattaatactactttcatcactctcaattcaatatattccattttgcatttatgat 8327781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 13500829 - 13500773
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||| |||||||||||||| |||||||| ||||||||    
T  13500829 taattaatactactttcagcactcccaattcaatattttccactttgcatttatgat 13500773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 17342836 - 17342892
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||||||  ||||||||    
T  17342836 taattaatactacttttatcactctcaattcaatatatttcactttgtatttatgat 17342892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 21304392 - 21304448
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || |||||||||||| |||||||||| ||||||||||| ||||||||    
T  21304392 taattaatattactttcatcactcttaattcaatatatttcactttgcatttatgat 21304448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 33149281 - 33149337
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| ||  ||||||| ||||||||    
T  33149281 taattaatactactttcatcactctcaattcaatatattctactttgcatttatgat 33149337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 40019767 - 40019823
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || |||||||||||| |||||||||||||||||||||  ||||||||    
T  40019767 taattaatattactttcatcactctgaattcaatatttttcactttgtctttatgat 40019823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 11324252 - 11324303
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgc 275  Q
    ||||||||||||||||  |||||||||||||||||||||| || ||||||||    
T  11324252 actataattaatactacattcatcactctcaattcaatatattccactttgc 11324303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 11482273 - 11482324
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgc 275  Q
    ||||||||||||||||  |||||||||||||||||||||| || ||||||||    
T  11482273 actataattaatactacattcatcactctcaattcaatatattccactttgc 11482324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 491
Target Start/End: Complemental strand, 25682947 - 25682850
Alignment:
Q  394 acggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||| ||||| || ||||| | ||| |||||||||||||| |||| |||||  | ||||||||||||| |||||||| |||||| || ||||| ||||    
T  25682947 acggtgactaacccaagaacatgcctccctagctaaagtatgagcaaccatgctcgcttgtctcctaacaaacttcaccttgaagttagaatgtaaag 25682850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 46363512 - 46363455
Alignment:
Q  227 ataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||||| || || ||||||||||||||||| ||| ||||||| ||||||||    
T  46363512 ataattaatactacttccaccactctcaattcaatatattttactttgcatttatgat 46363455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 2886179 - 2886235
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||||||| ||||||||    
T  2886179 taattaatactactttcaccactctcaattcaatatattctactttgcatttatgat 2886235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 7785374 - 7785318
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||| ||| ||||||||||||||| ||||||||| | ||||||||    
T  7785374 taattaatactacttttatcgctctcaattcaatatatttcactttacatttatgat 7785318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 10587681 - 10587625
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| ||  | ||||| ||||||||    
T  10587681 taattaatactactttcatcactctcaattcaatatattctattttgcatttatgat 10587625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 29225761 - 29225817
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| ||  ||||||| ||||||||    
T  29225761 taattaatactactttcatcactcccaattcaatatattctactttgcatttatgat 29225817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 51749283 - 51749227
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||| ||||||||||| || |||||||| ||||||||    
T  51749283 taattaatattactttcatcactcccaattcaatatattccactttgcatttatgat 51749227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 914750 - 914801
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatatttttcactttg 274  Q
    |||| ||||||||| ||||||||||| |||||||||||||| || |||||||    
T  914750 cactctaattaatattaatttcatcattctcaattcaatatcttccactttg 914801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 2885528 - 2885447
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    ||||| |||| |||||||| ||||| ||| |||||||||||||||| |||| | ||| || |||||| |||||| ||||||||    
T  2885528 aaaaatacggtgactagcccaagaacaggtcgccctagctaaagtatgagc-aacatgttcgcttgtatcctaacaaacttca 2885447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 486
Target Start/End: Complemental strand, 14485284 - 14485214
Alignment:
Q  416 gccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
    |||||||||||||||||| |||| || || || | |||||||||||| ||||||| ||| || ||||||||    
T  14485284 gccgccctagctaaagtatgagcaactatgttcgtttgtctcctaatgaacttcaccttaaagttggaatg 14485214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 486
Target Start/End: Complemental strand, 51113617 - 51113519
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
    ||||| |||| ||||| || ||||| ||| ||||||||||||  || |||| ||||| || |||| |||||||| |||||||| || ||| ||||||||    
T  51113617 aaaaatacggtgactaacccaagaacaggtcgccctagctaagctatgagcaaccatgttcgcttctctcctaacaaacttcacctcgaagttggaatg 51113519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 2571374 - 2571423
Alignment:
Q  231 ttaatactaatttcatcactctcaattcaatatttttcactttgctttta 280  Q
    ||||||||| ||||||||||||||||||||||| ||  ||||||| ||||    
T  2571374 ttaatactactttcatcactctcaattcaatatattctactttgcattta 2571423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 948687 - 948631
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||||  ||||||||| | |||||||||| || |||||||| ||||||||    
T  948687 taattaatactatcttcatcactttgaattcaatatattccactttgcatttatgat 948631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 3555655 - 3555599
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||  || ||||||||||| || |||||||| ||||||||    
T  3555655 taattaatactactttcatctatcccaattcaatatattccactttgcatttatgat 3555599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 3718949 - 3718893
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||||  |||||||||||||||||||||| ||  ||||| | ||||||||    
T  3718949 taattaatactaccttcatcactctcaattcaatatattatactttacatttatgat 3718893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 5040675 - 5040619
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||| ||||| |||||||||||  |||||||||| |||||||| || ||||||||    
T  5040675 taattattactattttcatcactcctaattcaatatatttcacttcgcatttatgat 5040619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 24131500 - 24131444
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||| ||||||||||| ||  ||||||| ||||||||    
T  24131500 taattaatactactttcaccactcccaattcaatatattatactttgcatttatgat 24131444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 28277138 - 28277082
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||| | |||||||| | |||||||||||| ||||||||| | ||||||||    
T  28277138 taattaataccactttcatcattttcaattcaatatatttcactttacatttatgat 28277082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 29756242 - 29756186
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||| ||||||||||| ||  ||||||| ||||||||    
T  29756242 taattaatactactttcaccactcccaattcaatatattctactttgcatttatgat 29756186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 34813925 - 34813981
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||| ||||||| |||||||| |||||||||||||| ||  ||||||| ||||||||    
T  34813925 taatgaatactactttcatcattctcaattcaatatattctactttgcatttatgat 34813981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 37925346 - 37925290
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||| ||||||||||||||||| ||  ||||||| ||||||||    
T  37925346 taattaatattactttcaccactctcaattcaatatattctactttgcatttatgat 37925290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 40061817 - 40061873
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| ||  | ||||| ||||||||    
T  40061817 taattaatattactttcatcactctcaattcaatatattctaatttgcatttatgat 40061873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 45889348 - 45889292
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||| ||  |||||||||| || |||||||| ||||||||    
T  45889348 taattaatactactttcatcattcataattcaatatattccactttgcatttatgat 45889292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 46496026 - 46496082
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||| |  |||||||||| || |||||||| ||||||||    
T  46496026 taattaatactactttcatcacgcctaattcaatatattccactttgcatttatgat 46496082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 46536348 - 46536404
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||||| |||| ||||| || |||||||  ||||||||    
T  46536348 taattaatactactttcatcactcttaatttaatatattccactttgtatttatgat 46536404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 50267538 - 50267482
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || |||||||| || ||||||||||| ||||||||| | ||||||||    
T  50267538 taattaatattactttcatcattcccaattcaatatatttcactttacatttatgat 50267482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 52382486 - 52382430
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||| ||||||||||||||||| ||| ||||| | ||||||||    
T  52382486 taattaatattactttcaccactctcaattcaatatattttactttacatttatgat 52382430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 9e-25; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 325 - 491
Target Start/End: Complemental strand, 88924 - 88758
Alignment:
Q  325 accgaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgcccta 424  Q
    ||||||||||||| ||||| |||||||||| |   | || |||||||| | ||||||  | | ||||| |||| |||||||| ||||| |||||||||||    
T  88924 accgaagcaaaattaactattatcattaatcaaccaatgctcaatacaagaaggataagaataaaaaatacggtgactagcccaagaacaggccgcccta 88825  T
Q  425 gctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||||||| |||| ||||| || |||||||||| |||||||||||  ||||| |||||||| ||||    
T  88824 gctaaagtatgagcaaccatgttcgcttgtctccaaataaacttcacgttgaagttggaatgtaaag 88758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 23684967 - 23685023
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
T  23684967 taattaatactactttcatcactctcaattcaatatatttcactttgcatttatgat 23685023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 28301442 - 28301498
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
T  28301442 taattaatactactttcatcactctcaattcaatatatttcactttgcatttatgat 28301498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 491
Target Start/End: Original strand, 34695730 - 34695892
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| |||||||||| |   | ||||||||||| | ||||||  | | |||||  ||| ||| |||| ||||| | |||||||||||||    
T  34695730 aagcaaagttaactattatcattaatcaaccaatgttcaatacaagaaggataagaataaaaaatgcggtgacaagcccaagaacaagccgccctagcta 34695829  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||| |||| ||||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  34695830 aagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgtaaag 34695892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 491
Target Start/End: Original strand, 34718142 - 34718304
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| |||||||||| |   | ||||||||||| | ||||||  | | |||||  ||| ||| |||| ||||| | |||||||||||||    
T  34718142 aagcaaagttaactattatcattaatcaaccaatgttcaatacaagaaggataagaataaaaaatgcggtgacaagcccaagaacaagccgccctagcta 34718241  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||| |||| ||||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  34718242 aagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgtaaag 34718304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 486
Target Start/End: Original strand, 12130460 - 12130621
Alignment:
Q  325 accgaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgcccta 424  Q
    ||||||||||| | ||||| |||||||||| |   | ||||||||||| | ||||||  | | ||||| ||||  ||||||  |||||||||||  ||||    
T  12130460 accgaagcaaagttaactattatcattaatcaaccaatgttcaatacaagaaggataagaataaaaaatacggtaactagctcaagaataggccctccta 12130559  T
Q  425 gctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
    ||||||||| |||| ||||| || ||||||||| ||| |||||||| || ||| ||||||||    
T  12130560 gctaaagtatgagcaaccatgttcgcttgtctcataacaaacttcacctcgaagttggaatg 12130621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 9710283 - 9710154
Alignment:
Q  362 tgttcaatacatggaggata-gaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctccta 460  Q
    ||||||||||| | |||||| ||||| ||||| ||||  ||||||| ||||| || ||| | ||||||||||| |||| ||||| || ||||||||||||    
T  9710283 tgttcaatacaagaaggataagaact-aaaaatacggttactagcccaagaacagaccgtcttagctaaagtatgagcaaccatgttcgcttgtctccta 9710185  T
Q  461 ataaacttcaacttgaaattggaatgcaaag 491  Q
    | |||||||| || ||| |||||||| ||||    
T  9710184 acaaacttcacctcgaagttggaatgtaaag 9710154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 491
Target Start/End: Original strand, 18344205 - 18344282
Alignment:
Q  414 aggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||||||||||||||| |||| ||||| || |||| |||||||| ||| |||| |||||| |||||||| ||||    
T  18344205 aggccgccctagctaaagtatgagcaaccatgttcgcttatctcctaacaaatttcaccttgaagttggaatgtaaag 18344282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 435177 - 435121
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||| | ||||||||    
T  435177 taattaatactactttcatcattctcaattcaatatatttcactttacatttatgat 435121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 4794581 - 4794637
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||| |||||||||||| || |||||||| ||||||||    
T  4794581 taattaatactactttcatcactttcaattcaatatattccactttgcatttatgat 4794637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 8550745 - 8550685
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| |||||||||||| |||||||||| ||  ||||||| ||||||||    
T  8550745 actataattaatactactttcatcactcttaattcaatatattagactttgcatttatgat 8550685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 37247983 - 37247927
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||| ||||||||||||| ||||||||||| ||||||||    
T  37247983 taattaatattactttcatcacactcaattcaatatatttcactttgcatttatgat 37247927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 41436087 - 41436143
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||| |||||||||||||| || |||||||| ||||||||    
T  41436087 taattaatactactttcatcattctcaattcaatatattccactttgcatttatgat 41436143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 3199906 - 3199992
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaacaatgacac 317  Q
    |||||||||||| ||||| ||||| ||||||||||| ||  ||||||| ||||||||   |  ||||||||||||| |||||||||||||    
T  3199906 taattaatactactttcaccactcccaattcaatatattatactttgcatttatgat---aaaaaatgcacaaatagttaacaatgacac 3199992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 10069684 - 10069609
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaata 303  Q
    ||||||||| || ||||||||||||||||||||||| ||  ||||||| |||||||| |  | |||||||||||||    
T  10069684 taattaataatactttcatcactctcaattcaatatattcgactttgcatttatgataatggtaaatgcacaaata 10069609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 11291949 - 11292038
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaa 477  Q
    ||||| |||| |||||||| ||||| | |||| ||||||||||||| |||| | ||| || ||| ||||||||| |||||||| ||||||    
T  11291949 aaaaatacggtgactagcccaagaacaagccgacctagctaaagtatgagcaaacatgttcgctcgtctcctaacaaacttcaccttgaa 11292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 13718904 - 13718852
Alignment:
Q  232 taatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||| ||||| ||||||||| |||||||||||||| ||||||| ||||||||    
T  13718904 taataataattgcatcactcttaattcaatattttttactttgcatttatgat 13718852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 26273767 - 26273823
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| ||  ||||||| ||||||||    
T  26273767 taattaatactactttcatcactcccaattcaatatattctactttgcatttatgat 26273823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 44424362 - 44424306
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||| |||||||||||||| ||  ||||||| ||||||||    
T  44424362 taattaatactactttcatcattctcaattcaatatattcaactttgcatttatgat 44424306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 12524309 - 12524376
Alignment:
Q  236 actaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaata 303  Q
    |||||| |||||| || ||||||||||| || |||||||| |||||||||| || |||||||| ||||    
T  12524309 actaatgtcatcattcccaattcaatatcttccactttgcatttatgatcatagtaaatgcaccaata 12524376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 7648965 - 7648923
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcac 270  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||    
T  7648965 taattaatactattttcatcactcccaattcaatatatttcac 7648923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 13538362 - 13538312
Alignment:
Q  234 atactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||| ||||||||||||||||||||||||| || |||||| | ||||||||    
T  13538362 atacaaatttcatcactctcaattcaatatcttccactttacatttatgat 13538312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 33751469 - 33751503
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaata 262  Q
    |||||||||||| ||||||||||||||||||||||    
T  33751469 taattaatactactttcatcactctcaattcaata 33751503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 13375289 - 13375232
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatat-ttttcactttgcttttatgat 284  Q
    ||||||||| || |||||||| |||||||||||||| |||||||||| | ||||||||    
T  13375289 taattaatattattttcatcattctcaattcaatatattttcactttacatttatgat 13375232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 28108474 - 28108429
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcacttt 273  Q
    |||||||||||| |||||||| |||||||||||||| || ||||||    
T  28108474 taattaatactactttcatcattctcaattcaatatattccacttt 28108429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 5212057 - 5212001
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||  ||| |||||||||||| || |||||||| ||||||||    
T  5212057 taattaatactactttcacaactttcaattcaatatattccactttgcatttatgat 5212001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 6213949 - 6213893
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||||| |||| ||||| ||  ||||||| ||||||||    
T  6213949 taattaatactactttcatcactcttaattgaatatattctactttgcatttatgat 6213893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 7650074 - 7650018
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||||  ||||||| | |||||||||||| || |||||||| ||||||||    
T  7650074 taattaatactatcttcatcattttcaattcaatatattccactttgcatttatgat 7650018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 7931595 - 7931539
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||  |||||||||||||||| ||| ||||| | ||||||||    
T  7931595 taattaatactactttcacaactctcaattcaatatattttactttacatttatgat 7931539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 8031749 - 8031805
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||| |||| || ||||||||||| ||| ||||||| ||||||||    
T  8031749 taattaatactacttttatcattcacaattcaatatatttaactttgcatttatgat 8031805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 11726821 - 11726765
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||||| |||||||||| ||  |||||||  |||||||    
T  11726821 taattaatactactttcatcactcttaattcaatatattctactttgcaattatgat 11726765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 14384377 - 14384321
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||| |||||||||||||||||| ||  ||||| | ||||||||    
T  14384377 taattaatactactttcttcactctcaattcaatatattatactttacatttatgat 14384321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 19515889 - 19515945
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||| |||  ||||||||||| ||| ||||||| ||||||||    
T  19515889 taattaatactactttcattacttacaattcaatatattttactttgcatttatgat 19515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 31592558 - 31592614
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| ||  ||||||  ||||||||    
T  31592558 taattaatattattttcatcactctcaattcaatatattctactttgtatttatgat 31592614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 39095639 - 39095695
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||  ||||||||||| || |||||||| ||||||||    
T  39095639 taattaatattactttcatcactgacaattcaatatattccactttgcatttatgat 39095695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 43427185 - 43427129
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| ||  | ||||| ||||||||    
T  43427185 taattaatactactttcatcactcccaattcaatatattctattttgcatttatgat 43427129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 44024722 - 44024782
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| |||||||| ||| || ||||||| ||  ||||||| ||||||||    
T  44024722 actataattaatactattttcatcattcttaactcaatatattctactttgcatttatgat 44024782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 491
Target Start/End: Complemental strand, 13415388 - 13415222
Alignment:
Q  325 accgaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgcccta 424  Q
    |||||| |||| | ||||| |||||||||| |   | ||||||||||| | |||||| || | ||||| |||| |||||||| ||||| || ||||||||    
T  13415388 accgaaacaaagttaactattatcattaatcaaccaatgttcaatacaagaaggataaaaataaaaaatacggtgactagcccaagaacagaccgcccta 13415289  T
Q  425 gctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||||||| |||| ||||| || ||||||||||||  |||||||| |||||| |||||||| ||||    
T  13415288 gctaaagtatgagcaaccatgttcgcttgtctcctagcaaacttcaccttgaagttggaatgtaaag 13415222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 339 - 491
Target Start/End: Original strand, 40588566 - 40588718
Alignment:
Q  339 aactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagc 438  Q
    ||||| |||||||||| |  || ||||||||||| | |||||| || | ||||| |||| |||||||| ||||| |||||||||||||||||||| | ||    
T  40588566 aactattatcattaatcaactaatgttcaatacaagaaggataaaaataaaaaatacggtgactagcccaagaacaggccgccctagctaaagtatgtgc 40588665  T
Q  439 gaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
     | ||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  40588666 aatcatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgtaaag 40588718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 477915 - 478044
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | ||||||  | | ||||| |||| || ||||| ||||| ||| |||||||||||| ||| |||| ||||| || |||||||||||||    
T  477915 tgttcaatacaagaaggataagaataaaaaatacggtgattagcccaagaacaggacgccctagctaaggtatgagcaaccatgttcgcttgtctcctaa 478014  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     |||||||| |||||| |||||||| ||||    
T  478015 caaacttcaccttgaagttggaatgtaaag 478044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 469
Target Start/End: Complemental strand, 28315472 - 28315328
Alignment:
Q  325 accgaagcaaaa-tcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccct 423  Q
    |||||||||||| | ||||| |||||||||| |  || ||||||||||| | |||||| || | ||||| ||||||||||||| | ||| || |||||||    
T  28315472 accgaagcaaaagttaactattatcattaatcaattaatgttcaatacaagaaggataaaaataaaaaa-acggcgactagcccaggaacagaccgccct 28315374  T
Q  424 agctaaagtacgagcgaccatatttgcttgtctcctaataaacttc 469  Q
    ||||||| || |||| ||||| ||||||| ||| |||| |||||||    
T  28315373 agctaaaatatgagcaaccatgtttgcttatctgctaacaaacttc 28315328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 27987662 - 27987722
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  27987662 actataattaatactactttcatcactcacaattcaatatatttcattttgcatttatgat 27987722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 28044964 - 28045024
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  28044964 actataattaatactactttcatcactcacaattcaatatatttcattttgcatttatgat 28045024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 33642649 - 33642752
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| ||||| || || |||||||||||||| || | ||||| || ||||||||||||| |||||||  |||||| ||||||||     
T  33642649 aaaaatacggtgactagcccaagaacagaccaccctagctaaagtatgaacaaccatgttcgcttgtctcctaacaaacttcgccttgaagttggaatgt 33642748  T
Q  488 aaag 491  Q
    ||||    
T  33642749 aaag 33642752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 9497080 - 9496998
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    ||||| |||| |||||| | ||||| ||||||||||||||||||||  ||| || || || ||||||||||||||||||||||    
T  9497080 aaaaatacggtgactagtccaagaacaggccgccctagctaaagtataagcaactatgttcgcttgtctcctaataaacttca 9496998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 4274398 - 4274342
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||    
T  4274398 taattaatattattttcaccactctcaattcaatatatttcactttgcatttatgat 4274342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 28802775 - 28802831
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| || |||||||| ||||||||    
T  28802775 taattaataatattttcatcactctcaattcaatatattccactttgcatttatgat 28802831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 39171551 - 39171607
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||    
T  39171551 taattaatactattttcatcactcacaattcaatatattccactttgcatttatgat 39171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 42412482 - 42412426
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||    
T  42412482 taattaatactactttcatcactcccaattcaatatattccactttgcatttatgat 42412426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 42558680 - 42558624
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||||| |||||||||| || |||||||| ||||||||    
T  42558680 taattaatactactttcatcactcttaattcaatatattccactttgcatttatgat 42558624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 139030 - 139113
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaacaa 311  Q
    ||||||||||||||||||| |||| ||||||| ||| || |||||||| ||||||||  | | |||||||| |||| |||||||    
T  139030 taattaatactaatttcattactcacaattcattatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaa 139113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 7127514 - 7127443
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    |||||||| ||||| || ||||||||||||||||| |||| | ||| || ||||||||||||| ||||||||    
T  7127514 gactagcccaagaacagaccgccctagctaaagtatgagcaatcatgttcgcttgtctcctaacaaacttca 7127443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 10729021 - 10728938
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaacaa 311  Q
    |||||||||||| ||| ||||||| ||||||||||| || |||||||| |||||||| | |   |||||||||||| |||||||    
T  10729021 taattaatactactttaatcactcccaattcaatatattccactttgcatttatgataagaaagaatgcacaaatacttaacaa 10728938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 45197619 - 45197674
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatga 283  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||| | |||||||    
T  45197619 taattaatagtaatttcatcactctcaattcaatatatttcattttacatttatga 45197674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 598122 - 598204
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    ||||| |||| |||||||| ||||| || ||||| ||||||||||| |||| ||||| || ||||||||||||| ||| ||||    
T  598122 aaaaatacggtgactagcctaagaacagaccgccttagctaaagtatgagcaaccatgttcgcttgtctcctaacaaatttca 598204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 3606622 - 3606727
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggc--cgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaat 485  Q
    ||||| |||| |||||||| ||||| ||||  | |||||||||||||| || | |||||||| ||||||||||||| |||||||| || ||| || ||||    
T  3606622 aaaaatacggtgactagcctaagaacaggcgtcaccctagctaaagtatgaacaaccatattcgcttgtctcctaacaaacttcacctcgaagttagaat 3606721  T
Q  486 gcaaag 491  Q
    | ||||    
T  3606722 gtaaag 3606727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 5423268 - 5423207
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||||||||| ||| |||| |||||||||||||| || |||||||  ||||||||    
T  5423268 cactataattaatactacttttatcattctcaattcaatatcttccactttgtatttatgat 5423207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 5962572 - 5962519
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttat 281  Q
    ||||||||| |||||||||||||| ||||||||||| || |||||||| |||||    
T  5962572 taattaatattaatttcatcactcccaattcaatatattccactttgcatttat 5962519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 491
Target Start/End: Complemental strand, 11870552 - 11870463
Alignment:
Q  402 tagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||| ||||| |||  ||||||||||||||| |||| ||||| || ||||||||||||| |||||||| || ||| || ||||| ||||    
T  11870552 tagcccaagaacaggttgccctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttagaatgtaaag 11870463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 491
Target Start/End: Complemental strand, 23854200 - 23854131
Alignment:
Q  422 ctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||||||| |||| ||||| || ||||||||||||| ||| |||| |||||| |||||||| ||||    
T  23854200 ctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaagttcaccttgaagttggaatgtaaag 23854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 2195476 - 2195532
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| ||  ||||||| ||||||||    
T  2195476 taattaatactactttcatcactcccaattcaatatattctactttgcatttatgat 2195532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 5392057 - 5392113
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||||||    
T  5392057 taattaatactactttcaacactcccaattcaatatattccactttgcatttatgat 5392113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 11637144 - 11637204
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||  ||||| | ||||||||    
T  11637144 actataattaatactactttcaccactctcaattcaatatattctactttacatttatgat 11637204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 27868424 - 27868368
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||| |||||||||||||| ||  ||||||| ||||||||    
T  27868424 taattaatactactttcatcattctcaattcaatatattctactttgcatttatgat 27868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 31410707 - 31410651
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||| ||||| |||||||||| || |||||||| ||||||||    
T  31410707 taattaatactactttcattactcttaattcaatatattccactttgcatttatgat 31410651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 481
Target Start/End: Original strand, 36194447 - 36194599
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| |||||||||| |   | ||||||||||| | ||||||  | | ||||| |||| |||||||  ||||| | | | |||||||||    
T  36194447 aagcaaagttaactattatcattaatcaaccaatgttcaatacaagaaggataagaattaaaaatacggtgactagctcaagaacatgtcaccctagcta 36194546  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattg 481  Q
    || || |||| ||||| ||| |||||||||||| |||||||| || |||||||    
T  36194547 aactatgagcaaccatgttttcttgtctcctaacaaacttcatctcgaaattg 36194599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 23764981 - 23765030
Alignment:
Q  235 tactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||| |||||||||||||||||||||||| ||| ||||| | ||||||||    
T  23764981 tacttatttcatcactctcaattcaatatattttactttacatttatgat 23765030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 27571578 - 27571615
Alignment:
Q  246 tcactctcaattcaatatttttcactttgcttttatga 283  Q
    |||||||||||||||||||||||||||| | |||||||    
T  27571578 tcactctcaattcaatatttttcactttacatttatga 27571615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 32967376 - 32967331
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcacttt 273  Q
    |||||||||||| |||||||| |||||||||||||| || ||||||    
T  32967376 taattaatactactttcatcattctcaattcaatatattccacttt 32967331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 44615464 - 44615411
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttat 281  Q
    ||||||||| || ||||||||||||||||||||||| ||  ||||||| |||||    
T  44615464 taattaatattattttcatcactctcaattcaatatattctactttgcatttat 44615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 1230461 - 1230405
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || || |||||||||||||||||||| ||  ||||||| ||||||||    
T  1230461 taattaatattatttccatcactctcaattcaatatattctactttgcatttatgat 1230405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 5918912 - 5918952
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatat 263  Q
    ||||||||||||||||||||| || |||| |||||||||||    
T  5918912 cactataattaatactaattttattactcccaattcaatat 5918952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 7258466 - 7258410
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| ||  | ||||| ||||||||    
T  7258466 taattaatactactttcatcactcccaattcaatatattctagtttgcatttatgat 7258410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 8418401 - 8418345
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||| ||| ||  ||||| | ||||||||    
T  8418401 taattaatactactttcatcactctcaattcagtatattctactttacatttatgat 8418345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 14689968 - 14690024
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||| ||||||||||| ||  ||||||| ||||||||    
T  14689968 taattaatactactttcaccactcccaattcaatatattctactttgcatttatgat 14690024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 14748805 - 14748749
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| || |||||||||||||| ||  ||||||| ||||||||    
T  14748805 taattaatactactttcaccattctcaattcaatatattctactttgcatttatgat 14748749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 15020676 - 15020736
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||||| |||||||||||||  ||||||||||| ||  ||||||| | ||||||    
T  15020676 actataattaataataatttcatcactaccaattcaatatattctactttgcatgtatgat 15020736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 20245259 - 20245323
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcac 287  Q
    |||||||||||||| |||||||| |  |||||||||||||| ||||| ||||  ||||| |||||    
T  20245259 cactataattaatattaatttcacccgtctcaattcaatatctttcattttgtatttataatcac 20245323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 20247902 - 20247838
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcac 287  Q
    |||||||||||||| |||||||| |  |||||||||||||| ||||| ||||  ||||| |||||    
T  20247902 cactataattaatattaatttcacccgtctcaattcaatatctttcattttgtatttataatcac 20247838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 39998171 - 39998227
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||||| | ||||||||    
T  39998171 taattaatactactttcaccactctcaattcaatatattctactttacatttatgat 39998227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 45537471 - 45537415
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||| |||||||||||| | | ||||||| | ||||||    
T  45537471 taattaatactattttcatcactatcaattcaatatatgttactttgcatatatgat 45537415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 491
Target Start/End: Complemental strand, 21321895 - 21321729
Alignment:
Q  325 accgaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgcccta 424  Q
    ||||||| ||| | ||||| |||||||||| |   | ||||||||||| | ||||||  | | ||||| |||| |||||||| ||||| |||||||||||    
T  21321895 accgaagtaaagttaactattatcattaatcaaccaatgttcaatacaagaaggataagaataaaaaatacggtgactagcccaagaacaggccgcccta 21321796  T
Q  425 gctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||||||| |||| |||||  | ||||||||| |||||||||||| |||||| |||||||| ||||    
T  21321795 gctaaagtatgagcaaccatgatcgcttgtctcttaataaacttcaccttgaagttggaatgtaaag 21321729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 399 - 491
Target Start/End: Complemental strand, 49951604 - 49951512
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||| |||||||||||||||||||| |||| ||||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  49951604 gactagcccaagaacaggccgccctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgtaaag 49951512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 485
Target Start/End: Original strand, 18442006 - 18442129
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | |||||| || | ||||| |||| |||||||| ||||| ||||||||||||||||| || |||| ||||| || | ||||||| |||    
T  18442006 tgttcaatacaagaaggataaaaattaaaaatacggtgactagcccaagaacaggccgccctagctaaaatatgagcaaccattttcgtttgtctcataa 18442105  T
Q  462 taaacttcaacttgaaattggaat 485  Q
     |||||||| |||||| |||||||    
T  18442106 caaacttcaccttgaagttggaat 18442129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 32576907 - 32577036
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | ||||||  |  |||||| || | |||||||| ||||| |||| ||||||||||||||| |||| ||||| || |||||||||||||    
T  32576907 tgttcaatacaagaaggataagaaacaaaaatacagtgactagcccaagaacaggctgccctagctaaagtatgagcaaccatgttcgcttgtctcctaa 32577006  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     |||||||| || ||| |||||||| ||||    
T  32577007 caaacttcacctcgaagttggaatgtaaag 32577036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 26422487 - 26422590
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| |||||||||||||| ||| ||||||| |||| ||||| ||||  |||||||||| |||||||| || ||| ||||||||     
T  26422487 aaaaatacggtgactagcccaagaataggccgccgtagttaaagtatgagcaaccatgtttgtctgtctcctaacaaacttcacctcgaagttggaatgt 26422586  T
Q  488 aaag 491  Q
    ||||    
T  26422587 aaag 26422590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 51259414 - 51259517
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| || |||||||||||||||||||  || |||| ||||| || ||||||||||||| |||||||| || ||| ||||||||     
T  51259414 aaaaatacggtgactagcccaaaaataggccgccctagctaagctatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgt 51259513  T
Q  488 aaag 491  Q
    ||||    
T  51259514 aaag 51259517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 30568665 - 30568723
Alignment:
Q  226 tataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||    
T  30568665 tataattaatattattttcatcactctcaattcaatatatttcactttgcatttatgat 30568723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 37245748 - 37245840
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||| || ||||||||||||||||| |||| ||||| || | ||||||||||| |||||||| || ||| |||||||| ||||    
T  37245748 gactagcccaagaacagaccgccctagctaaagtatgagcaaccatgttcgattgtctcctaacaaacttcacctcgaagttggaatgtaaag 37245840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 41835207 - 41835299
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||| ||||||||||| ||||| || |||  ||||| || ||||||||||||| |||||||| || |||||||||||| ||||    
T  41835207 gactagcccaagaacaggccgccctatctaaactatgaggaaccatgttcgcttgtctcctaacaaacttcatctcgaaattggaatgtaaag 41835299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 56065935 - 56065832
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| ||  ||||||||||||||||||  || |||| ||||| || ||||||||||||| |||||||| || ||| ||||||||     
T  56065935 aaaaatacggtgactagcccaaatataggccgccctagctaagctatgagcaaccatgttcgcttgtctcctaacaaacttcatctcgaagttggaatgt 56065836  T
Q  488 aaag 491  Q
    ||||    
T  56065835 aaag 56065832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 2065181 - 2065052
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | ||||||  | | ||||| |||| |||||||| ||||| | ||  |||||||||||||| |||| ||||| || | |||||||||||    
T  2065181 tgttcaatacaagaaggataagaataaaaaatacggtgactagcccaagaacatgctaccctagctaaagtatgagcaaccatgttcgtttgtctcctaa 2065082  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     |||||||| |||||| ||| |||| ||||    
T  2065081 caaacttcaccttgaagttgaaatgtaaag 2065052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 491
Target Start/End: Original strand, 51734871 - 51734960
Alignment:
Q  402 tagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||| ||||| |||||||||||||||||||| |||| ||||| ||  |||||| ||||| |||||||| || ||| |||||||| ||||    
T  51734871 tagcccaagaacaggccgccctagctaaagtatgagcaaccatgttcacttgtcacctaacaaacttcacctcgaagttggaatgtaaag 51734960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 22872487 - 22872431
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| || |||||||| ||||||||    
T  22872487 taattaatattactttcatcactctcaattcaatatattccactttgcatttatgat 22872431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 29655565 - 29655633
Alignment:
Q  402 tagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    ||||| ||||| ||| |||||||||||||||| |||| ||||| || ||||||||||||| ||||||||    
T  29655565 tagccaaagaacaggtcgccctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttca 29655633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 37309706 - 37309762
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| ||| ||||||| ||||||||    
T  37309706 taattaatattactttcatcactctcaattcaatatatttaactttgcatttatgat 37309762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 38319919 - 38319975
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| ||  ||||||| ||||||||    
T  38319919 taattaatactactttcatcactctcaattcaatatattctactttgcatttatgat 38319975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 42185895 - 42185839
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||  ||||||||    
T  42185895 taattaatactactttcatcactctcaattcaatatatttcaccttgtatttatgat 42185839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 47277785 - 47277725
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||| ||||| | ||||||||    
T  47277785 actataattaatactactttaatcactctcaattcaatatattttactttacatttatgat 47277725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 47846907 - 47846963
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||||  |||||||||| ||||||||||| ||||||||    
T  47846907 taattaatactactttcatcactcctaattcaatatatttcactttgcatttatgat 47846963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 8754348 - 8754451
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| ||||| || ||||| || |||| ||| ||||||||||||| ||||| || ||||||||| ||| |||||||| || ||| ||||||||     
T  8754348 aaaaatacggtgactatccaaagaacagaccgctctatctaaagtacgagcaaccatgttcgcttgtctcataacaaacttcatctcgaagttggaatgt 8754447  T
Q  488 aaag 491  Q
    ||||    
T  8754448 aaag 8754451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 49448849 - 49448924
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaata 303  Q
    |||||||||||| |||||||| |||||||||||||| ||  ||||||| |||||||| | ||  ||||||||||||    
T  49448849 taattaatactactttcatcattctcaattcaatatattatactttgcatttatgataatagagaatgcacaaata 49448924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 39976487 - 39976442
Alignment:
Q  230 attaatactaatttcatcactctcaattcaatatttttcactttgc 275  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||    
T  39976487 attaatactactttcatcactctcaattcaatatattccactttgc 39976442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 42024304 - 42024247
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttat 281  Q
    |||||||||||||||| ||||||||||  ||||||||||| || |||||||| |||||    
T  42024304 actataattaatactactttcatcacttccaattcaatatattccactttgcatttat 42024247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 43335126 - 43335077
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcacttt 273  Q
    |||||||||||||||| |||| |||||||||||||||||| || ||||||    
T  43335126 actataattaatactactttcttcactctcaattcaatatattccacttt 43335077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 17237051 - 17237107
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||| || |||||||||||| || |||||||| ||||||||    
T  17237051 taattaatactactttcatcgctttcaattcaatatattccactttgcatttatgat 17237107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 491
Target Start/End: Complemental strand, 23095505 - 23095413
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||| ||||| ||||||||||| || |||  | ||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  23095505 gactagcccaagaacaggccaccctagctaaaatatgagtaatcatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgtaaag 23095413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 491
Target Start/End: Complemental strand, 28426474 - 28426382
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||  ||||| || ||||||||||| |||| ||||| || ||||||||||||| |||||||  || ||| |||||||| ||||    
T  28426474 gactagcccaagagcaggccaccttagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttctcctcgaagttggaatgtaaag 28426382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 29644359 - 29644419
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| |||||||| |||||||||||||| ||  ||||| | ||||||||    
T  29644359 actataattaatactactttcatcattctcaattcaatatattctactttacatttatgat 29644419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 35998216 - 35998160
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||| ||||| | ||||||||    
T  35998216 taattaatactactttcaccactctcaattcaatatattttactttacatttatgat 35998160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 38160251 - 38160195
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||| ||||||||||||||||||| ||||||||||  ||||||||    
T  38160251 taattaatattacttttatcactctcaattcaatatatttcactttgtatttatgat 38160195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 41710243 - 41710187
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||| ||||||||||| || |||||||| ||||||||    
T  41710243 taattaatattactttcatcactcccaattcaatatattccactttgcatttatgat 41710187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 49119296 - 49119388
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||  ||||| || ||||||||||| |||| ||||| || ||||||||||||| |||||||  || ||| |||||||| ||||    
T  49119296 gactagcccaagagcaggccaccttagctaaagtatgagcaaccatgttcgcttgtctcctaacaaacttctcctcgaagttggaatgtaaag 49119388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 49306595 - 49306651
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||||  |||||||||| || |||||||| ||||||||    
T  49306595 taattaatactactttcatcactcctaattcaatatattccactttgcatttatgat 49306651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 54729582 - 54729527
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||| ||||||||||||| || |||||||| ||||||||    
T  54729582 taattaatactactttcatcac-ctcaattcaatatattccactttgcatttatgat 54729527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 46958731 - 46958786
Alignment:
Q  229 aattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||| ||| ||||||||||||||||||| ||  ||||||| ||||||||    
T  46958731 aattaatactactttaatcactctcaattcaatatattctactttgcgtttatgat 46958786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 4360507 - 4360453
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatg 282  Q
    |||||||||||| |||||||| || ||||||||||| || |||||||| ||||||    
T  4360507 taattaatactactttcatcattcacaattcaatatattccactttgcatttatg 4360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 431
Target Start/End: Original strand, 10575275 - 10575377
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| ||||||||||||   | ||||||||||| | ||||||  | ||||||| | || |||||||| || || |||||||||||||||    
T  10575275 aagcaaagttaactattatcattaattaaccaatgttcaatacaagaaggataagaatcaaaaatatggtgactagcccaaaaacaggccgccctagcta 10575374  T
Q  429 aag 431  Q
    |||    
T  10575375 aag 10575377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 28974316 - 28974370
Alignment:
Q  230 attaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||| |||||||||||||| |||||||| || | |||||| ||||||||    
T  28974316 attaatactactttcatcactctcatttcaatatattcccctttgcatttatgat 28974370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 3686019 - 3686072
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttat 281  Q
    ||||||||| || ||||||||||||||||||||||| ||  ||||||| |||||    
T  3686019 taattaatattactttcatcactctcaattcaatatattcaactttgcatttat 3686072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 27977155 - 27977208
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttat 281  Q
    |||||||||  | ||||||||||||||||||||||| || |||||||| |||||    
T  27977155 taattaatatcactttcatcactctcaattcaatatattccactttgcatttat 27977208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 53848661 - 53848710
Alignment:
Q  235 tactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||| ||||||||||||||||||||||| ||  ||||||| ||||||||    
T  53848661 tactactttcatcactctcaattcaatatattctactttgcatttatgat 53848710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 12619696 - 12619752
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||| | |||||||||| ||||| ||||  ||||||||    
T  12619696 taattaatactactttcatcactttaaattcaatatatttcattttgtatttatgat 12619752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 36047199 - 36047143
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||| ||||||||||||||||| ||  ||||||| ||||||||    
T  36047199 taattaatattactttcaccactctcaattcaatatattctactttgcatttatgat 36047143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 38976999 - 38977055
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||| | |||||||||||| || |||||| | ||||||||    
T  38976999 taattaatactactttcatcattttcaattcaatatattccactttacatttatgat 38977055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 39053000 - 39052944
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||||| | ||||||||    
T  39053000 taattaatactactttcaccactctcaattcaatatattctactttacatttatgat 39052944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 42544217 - 42544273
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||| ||||||| ||||||||||| || |||||||| ||||||||    
T  42544217 taattaatattacttttatcactcacaattcaatatattccactttgcatttatgat 42544273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 55360447 - 55360391
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| ||  ||||| | ||||||||    
T  55360447 taattaatattactttcatcactctcaattcaatatattgtactttacatttatgat 55360391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 491
Target Start/End: Original strand, 34497198 - 34497360
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| |||||||||| |   | ||||||||||||| |||||| || | ||||| |||| |||||||| ||||| |||||||||||||||    
T  34497198 aagcaaagttaactattatcattaatcaaccagtgttcaatacatgaaggataaaaataaaaaatacggtgactagcccaagaacaggccgccctagcta 34497297  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |  || |||| ||||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  34497298 agctatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgtaaag 34497360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 53497360 - 53497231
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | ||||||  | | ||||| |||| |||||||| ||||| |||| ||||||||||||||| ||||  |||| || |||||||||||||    
T  53497360 tgttcaatacaagaaggataataataaaaaatacggtgactagcccaagaacaggctgccctagctaaagtatgagcagccatgttcgcttgtctcctaa 53497261  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
    ||||||||| |||||| |||||||| ||||    
T  53497260 taaacttcaccttgaagttggaatgtaaag 53497231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 491
Target Start/End: Complemental strand, 48227731 - 48227567
Alignment:
Q  327 cgaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagc 426  Q
    ||||||||||| ||||| |||||||||| |   ||||||||||||| | | |||| || | ||||| | ||||| || || ||||| | | |||||||||    
T  48227731 cgaagcaaaattaactattatcattaatcaaccattgttcaatacaagaaagataaaaataaaaaatatggcgaataacccaagaacaagtcgccctagc 48227632  T
Q  427 taaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||||| |||  |||||||||||||||||||||| ||| |||| || ||| |||||||| ||||    
T  48227631 taaagtatgaggaaccatatttgcttgtctcctaacaaatttcacctcgaagttggaatgtaaag 48227567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 438
Target Start/End: Complemental strand, 15310916 - 15310817
Alignment:
Q  339 aactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagc 438  Q
    |||| ||||||||||||| | ||||||||||||||| |||||||||||||| || || |||||||| | ||||| |||||||||||| ||| ||| ||||    
T  15310916 aactgatatcattaattaaacattgttcaatacatgtaggatagaactcaataatacagcgactagtccaagaacaggccgccctagttaacgtatgagc 15310817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 491
Target Start/End: Original strand, 42340138 - 42340265
Alignment:
Q  364 ttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaata 463  Q
    ||||||||| | |||||| || | ||||| |||| |||||||| ||||| ||||||||||| |||||||  |||| ||||| || ||||||||||||| |    
T  42340138 ttcaatacaagaaggataaaaattaaaaatacggtgactagccaaagaacaggccgccctatctaaagtgtgagcaaccatgttcgcttgtctcctaaca 42340237  T
Q  464 aacttcaacttgaaattggaatgcaaag 491  Q
    ||||||| || ||| |||||||| ||||    
T  42340238 aacttcacctcgaagttggaatgtaaag 42340265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 26046990 - 26046912
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaac 466  Q
    ||||| |||| |||||||| ||||||| |||||||||||||||||| |||| ||||| || ||||||||||||| ||||    
T  26046990 aaaaatacggtgactagcccaagaataagccgccctagctaaagtatgagcaaccatgttcgcttgtctcctaacaaac 26046912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 491
Target Start/End: Original strand, 27608729 - 27608891
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| ||||||||||||   | | ||||||||| | ||||||  | | ||||| |||| |||||||| ||||| ||||||| |||||||    
T  27608729 aagcaaagttaactattatcattaattaaccagtattcaatacaagaaggataagaataaaaaatacggtgactagcccaagaacaggccgctctagcta 27608828  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |  || |||| ||||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  27608829 agctatgagcaaccatgttcgcttgtctcctaacaaacttcagctcgaagttggaatgtaaag 27608891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 53876535 - 53876452
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaacaa 311  Q
    ||||||||  || ||||||||||||||||||||||| ||||||||| | ||||||||    | |||||||||||||||||||||    
T  53876535 taattaattttactttcatcactctcaattcaatatatttcactttacatttatgatagtggaaaatgcacaaatatttaacaa 53876452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 647029 - 647158
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | | |||| || ||||||| |||| || ||| | ||||| ||||||||||| |||||||| |||| ||||| || | |||||||||||    
T  647029 tgttcaatacaagaaagataaaattcaaaaatacggtgattagtccaagaacaggccgccctaactaaagtatgagcaaccatgttcgtttgtctcctaa 647128  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     ||| |||| || ||| |||||||| ||||    
T  647129 caaatttcacctcgaagttggaatgtaaag 647158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 491
Target Start/End: Original strand, 31341608 - 31341713
Alignment:
Q  386 tcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaat 485  Q
    ||||||| |||| |||||||| |||||  ||| |||||| |||| ||| |||| ||||| |  | |||||||||||||||||||| |||||| |||||||    
T  31341608 tcaaaaatacggtgactagcccaagaaccggctgccctaactaaggtatgagcaaccatgtcagtttgtctcctaataaacttcaccttgaagttggaat 31341707  T
Q  486 gcaaag 491  Q
    | ||||    
T  31341708 gtaaag 31341713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 15082011 - 15082066
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||    
T  15082011 taattaatacta-tttcatcactctcaatttaatatatttcattttgcttttatgat 15082066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 26134802 - 26134746
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  26134802 taattagtactactttcatcactcccaattcaatatatttcactttgcatttatgat 26134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 27668426 - 27668370
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||| |||||||| |||||||||| ||||||||||| ||||||||    
T  27668426 taattaatactacttttatcactcttaattcaatatatttcactttgcatttatgat 27668370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 39329849 - 39329793
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| ||  ||||||| ||||||||    
T  39329849 taattaatactactttcatcactctcaattcaatatattctactttgcatttatgat 39329793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 46786077 - 46786024
Alignment:
Q  231 ttaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||| ||||||||    
T  46786077 ttaatactactttcatcgctcccaattcaatatatttcactttgcatttatgat 46786024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 2615779 - 2615703
Alignment:
Q  394 acggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    |||| |||||||| ||||| ||| |||||||| ||||||| |||| ||||| || | ||||||||||| ||||||||    
T  2615779 acggtgactagcccaagaacaggtcgccctagttaaagtatgagcaaccatgttcgtttgtctcctaacaaacttca 2615703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 5245420 - 5245476
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||| | ||||||||||||||||||||||| || |||||||  ||||||||    
T  5245420 taattaataccactttcatcactctcaattcaatatattccactttgtatttatgat 5245476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 9218153 - 9218209
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||| ||| ||  ||||||| ||||||||    
T  9218153 taattaatactactttcatcactctcaattcattatattctactttgcatttatgat 9218209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 15280613 - 15280669
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||| | ||||||||    
T  15280613 taattaatactactttcatcactcccaattcaatatattccactttccatttatgat 15280669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 490
Target Start/End: Original strand, 19117579 - 19117707
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | ||||||  | ||||||| |||| |||||||| ||||| |||||| |||||||||  || |||| || || || |  ||||||||||    
T  19117579 tgttcaatacaagaaggataagaatcaaaaatacggtgactagcctaagaacaggccgacctagctaagctatgagcaactatgttcgactgtctcctaa 19117678  T
Q  462 taaacttcaacttgaaattggaatgcaaa 490  Q
     |||||||| ||  || ||||||||||||    
T  19117679 caaacttcacctcaaatttggaatgcaaa 19117707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 39866652 - 39866596
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||| | ||||||||||| ||||||||| | ||||||||||| ||||||||    
T  39866652 taattaataccactttcatcactcacaattcaatgtatttcactttgcatttatgat 39866596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 46194305 - 46194249
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||||||| ||||||||    
T  46194305 taattaatactactttcaccactctcaattcaatatattctactttgcatttatgat 46194249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 52325185 - 52325241
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||| ||| |||||||||||||| || |||||||| ||||||||    
T  52325185 taattaatactactttcgtcattctcaattcaatatattccactttgcatttatgat 52325241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 491
Target Start/End: Complemental strand, 55199793 - 55199710
Alignment:
Q  408 aagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||| |||||||| |||||||  || |||| ||||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  55199793 aagaacaggccgccgtagctaagctatgagcaaccatgttcgcttgtctcctaacaaacttcacctcgaagttggaatgtaaag 55199710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 17777093 - 17777039
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatg 282  Q
    ||||||||| || ||||||||||||| ||||||||| || |||||||| ||||||    
T  17777093 taattaatattattttcatcactctcgattcaatatattccactttgcatttatg 17777039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 19078394 - 19078340
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatg 282  Q
    ||||||||| || ||||||||||||| ||||||||| || |||||||| ||||||    
T  19078394 taattaatattattttcatcactctcgattcaatatattccactttgcatttatg 19078340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 26832079 - 26832133
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatg 282  Q
    |||||||||||| ||||||||||  ||||| ||||| ||||||||||| ||||||    
T  26832079 taattaatactactttcatcactaccaatttaatatatttcactttgcatttatg 26832133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 32023200 - 32023147
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttat 281  Q
    ||||||||| || ||||||||||||||||||||||| ||  ||||||| |||||    
T  32023200 taattaatattactttcatcactctcaattcaatatattcaactttgcatttat 32023147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 36097752 - 36097707
Alignment:
Q  230 attaatactaatttcatcactctcaattcaatatttttcactttgc 275  Q
    ||||||| || ||||||||||||||||||||||| || ||||||||    
T  36097752 attaatattactttcatcactctcaattcaatatattccactttgc 36097707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 39851899 - 39851862
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaa 260  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  39851899 cactataattaatattaatttcatcactttcaattcaa 39851862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 40716801 - 40716838
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatattt 265  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  40716801 taattaatactaattgcatcactctgaattcaatattt 40716838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 1923098 - 1923154
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||| ||||||||||| ||  ||||||| ||||||||    
T  1923098 taattaatactactttcaccactcccaattcaatatattctactttgcatttatgat 1923154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 468
Target Start/End: Complemental strand, 2121363 - 2121303
Alignment:
Q  408 aagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaactt 468  Q
    ||||| || |||||||| |||||||| |||| ||||| || ||||||||||||| ||||||    
T  2121363 aagaacagaccgccctaactaaagtatgagcaaccatgttcgcttgtctcctaacaaactt 2121303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 3862271 - 3862215
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||| ||| ||| | ||||| ||||||||    
T  3862271 taattaatattactttcatcactctcaattcagtatattttaatttgcatttatgat 3862215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 15310987 - 15310923
Alignment:
Q  325 accgaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaa 389  Q
    |||||| |||| | |||| ||||||| ||||| | |||||| |||||||| ||||||||||||||    
T  15310987 accgaaacaaacttaactgatatcatcaattaaacattgtttaatacatgtaggatagaactcaa 15310923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 43639615 - 43639559
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||  |||  ||||||||||| ||||||||||| ||||||||    
T  43639615 taattaatactactttcacaacttccaattcaatatatttcactttgcatttatgat 43639559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 44234098 - 44234150
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgctttta 280  Q
    ||||||| |||| |||||||| | |||||||||||| ||||||||||| ||||    
T  44234098 taattaagactactttcatcaatttcaattcaatatatttcactttgcattta 44234150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 47496177 - 47496233
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||||| |||||||||| ||  ||||| | ||||||||    
T  47496177 taattaatactactttcatcactcttaattcaatatattagactttacatttatgat 47496233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 4268401 - 4268298
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| ||||| | |||||||||| ||||||| |||| ||||| || |||||||||||||||||||||| |||||| ||||||||     
T  4268401 aaaaatacggtgactagcccaagaacatgccgccctagataaagtatgagcaaccatgttcgcttgtctcctaataaacttcaccttgaagttggaatgt 4268302  T
Q  488 aaag 491  Q
    ||||    
T  4268301 aaag 4268298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 491
Target Start/End: Complemental strand, 20205316 - 20205154
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||| | ||||| |||||||||| |   | ||||||||||| | ||||||  | ||||||| |||  |||| ||| |||||||||| ||||||||||    
T  20205316 aagcaaagttaactattatcattaatcaaccaatgttcaatacaagaaggataagaatcaaaaatacgttgactggcccaagaataggctgccctagcta 20205217  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||| |||| ||||| || ||||||||||||| |||||||| || ||| |||||||| ||||    
T  20205216 aagtatgagcaaccatgttcgcttgtctcctaacaaacttcacctagaagttggaatgtaaag 20205154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 486
Target Start/End: Complemental strand, 25731159 - 25731012
Alignment:
Q  339 aactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagc 438  Q
    ||||| |||||||||| | | | ||||||||||| | ||||||  | | ||||| || | |||||||| ||||| |||||||||||||||||||| ||||    
T  25731159 aactattatcattaatcaaacaatgttcaatacaagaaggataagaataaaaaatacagtgactagcccaagaacaggccgccctagctaaagtatgagc 25731060  T
Q  439 gaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
     ||||| || |||| |||||||| |||||||| || ||| ||||||||    
T  25731059 aaccatgttcgcttatctcctaacaaacttcacctggaagttggaatg 25731012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 43573009 - 43573072
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatca 286  Q
    ||||||||||||||||||||||||||||| ||||||||||| |  |||||||| ||||||||||    
T  43573009 cactataattaatactaatttcatcactcccaattcaatatctcccactttgcatttatgatca 43573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 11375381 - 11375510
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | |||||| || | ||||| |||| || ||||| ||||| |||||||||||||||||||| |||| || || || ||||||||| |||    
T  11375381 tgttcaatacaagaaggataaaaattaaaaatacggtgaatagcccaagaacaggccgccctagctaaagtatgagcaactatgttcgcttgtctcttaa 11375480  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     |||||||| || | | |||||||| ||||    
T  11375481 caaacttcacctcggagttggaatgtaaag 11375510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 17243054 - 17242998
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||    
T  17243054 taattaatactactttcatcactctcaattcaatatattccactttgcatttatgat 17242998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 22767158 - 22767261
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| ||||| | |||||| ||||||||||| |||| ||||| || | ||||||||||| |||||||| || ||| ||||||||     
T  22767158 aaaaatacggtgactagcccaagaacatgccgccttagctaaagtatgagcaaccatgttcgtttgtctcctaacaaacttcacctcgaagttggaatgt 22767257  T
Q  488 aaag 491  Q
    ||||    
T  22767258 aaag 22767261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 491
Target Start/End: Complemental strand, 27292795 - 27292633
Alignment:
Q  328 gaagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagct 427  Q
    |||||||| | ||||| |||||||||| | | | ||||||||||| | | ||||  | | ||||| |||| |||||||| ||||| | | | ||||||||    
T  27292795 gaagcaaatttaactattatcattaatcaaacaatgttcaatacaagaatgataagaataaaaaatacggtgactagcccaagaacatgtc-ccctagct 27292697  T
Q  428 aaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||| |||| ||||| || ||||||||||| ||||||||||  ||||| |||||||| ||||    
T  27292696 aaagtatgagcaaccatgttcgcttgtctcctgataaacttcactttgaagttggaatgtaaag 27292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 42211342 - 42211397
Alignment:
Q  229 aattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  42211342 aattaatactactttcatcactcacaattcaatatatttcactttgcatttatgat 42211397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 858343 - 858399
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||||||    
T  858343 taattaatactactttcatcactctcaattaaatatatttcattttgcatttatgat 858399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 6173084 - 6173024
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||  ||||||| ||||||||    
T  6173084 actataattaatactactttcatcactcacaattcaatatattatactttgcatttatgat 6173024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 35334626 - 35334570
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||    
T  35334626 taattaatactactttcatcactcccaattcaatatattccactttgcatttatgat 35334570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 39183727 - 39183671
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||||||||| || |||||||| ||||||||    
T  39183727 taattaatattactttcatcactctcaattcaatatattccactttgcatttatgat 39183671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 486
Target Start/End: Complemental strand, 23075134 - 23075036
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
    ||||| |||| |||||||| ||||| | | || |||||||||| || |||| ||||| || ||||||||||||| |||||||| ||| || ||||||||    
T  23075134 aaaaatacggtgactagcccaagaacatgtcgtcctagctaaactatgagcaaccatgttcgcttgtctcctaacaaacttcaccttaaagttggaatg 23075036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 491
Target Start/End: Original strand, 15988660 - 15988737
Alignment:
Q  414 aggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||||||||| |||| ||||| | |||||||||||||| |||||||| || ||| ||| |||| ||||    
T  15988660 aggccgccttagctaaagtatgagcaaccatgtctgcttgtctcctaacaaacttcacctcgaagttgtaatgtaaag 15988737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 11099577 - 11099521
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||||  ||||||||    
T  11099577 taattaatactactttcatcactcccaattcaatatattccactttgtatttatgat 11099521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 16283687 - 16283631
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||| || ||| ||||||||||||||||||||||| || |||||||| ||||||||    
T  16283687 taattgatgctactttcatcactctcaattcaatatattccactttgcatttatgat 16283631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 35585716 - 35585660
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||| |||| || ||||||||||||||||||||||| ||||||||||  ||||||||    
T  35585716 taatcaatattactttcatcactctcaattcaatatatttcactttgtctttatgat 35585660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 36446787 - 36446731
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||| |||||||||||| ||  ||||||| ||||||||    
T  36446787 taattaatactactttcatcactttcaattcaatatattatactttgcatttatgat 36446731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 486
Target Start/End: Complemental strand, 12717860 - 12717713
Alignment:
Q  339 aactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagc 438  Q
    |||||||||||||||| |   |||||||| |||| | |||| | | |||| ||||| || ||||||   |||||  ||||||||| ||||| ||| ||||    
T  12717860 aactaatatcattaatcaataattgttcattacaagtaggagaaatctcacaaacatggtgactagatcaagaacgggccgccctcgctaaggtatgagc 12717761  T
Q  439 gaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
     |||||||| |||||||  | ||||||||||| ||| |||||| ||||    
T  12717760 aaccatattcgcttgtcgtcgaataaacttcatcttaaaattgaaatg 12717713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 13422456 - 13422417
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatat 263  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  13422456 actataattaatattactttcatcactctcaattcaatat 13422417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 486
Target Start/End: Complemental strand, 26076535 - 26076484
Alignment:
Q  435 gagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
    |||| ||||| |||||||||||||||| |||||||| |||||| ||||||||    
T  26076535 gagcaaccatgtttgcttgtctcctaacaaacttcaccttgaagttggaatg 26076484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 17741277 - 17741239
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaata 262  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  17741277 actataattaatattactttcatcactctcaattcaata 17741239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 25344840 - 25344782
Alignment:
Q  226 tataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||| |||||||| |||||||||||||| ||  ||||| | ||||||||    
T  25344840 tataattaatactactttcatcattctcaattcaatatattctactttacatttatgat 25344782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 4475249 - 4475310
Alignment:
Q  223 cactataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||||||||| ||| |||| |  |||||||| ||||| |||||||| ||||||||    
T  4475249 cactataattaatactacttttatcatttccaattcaacattttccactttgcatttatgat 4475310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 5072958 - 5073038
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaa 308  Q
    |||||||||||| || |||  ||| ||||||||||| ||| ||||| | |||||||| | |  ||||||||||||||||||    
T  5072958 taattaatactacttccattgctcccaattcaatatattttactttacatttatgataagaaaaaatgcacaaatatttaa 5073038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 6610845 - 6610901
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || |||||||||||  |||||||||| ||||||||| | ||||||||    
T  6610845 taattaatattactttcatcactccgaattcaatatatttcactttacatttatgat 6610901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 8369796 - 8369740
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||  ||| |||||||||||| || |||||||| ||||||||    
T  8369796 taattaatactactttcacaactttcaattcaatatattccactttgcatttatgat 8369740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 13087841 - 13087785
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||| ||||||||||||||||| ||  ||||||| ||||||||    
T  13087841 taattaatattactttcaccactctcaattcaatatattctactttgcatttatgat 13087785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 13135761 - 13135817
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||| ||||| |||||||||||  |||||||||| || |||||||| ||||||||    
T  13135761 taattactactactttcatcactcctaattcaatatattccactttgcatttatgat 13135817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 15564988 - 15564932
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||||||||||||||| ||||| ||  ||||||| ||||||||    
T  15564988 taattaatattactttcatcactctcaatttaatatattctactttgcatttatgat 15564932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 15898199 - 15898255
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||| ||||||||||||||||| ||  ||||||| ||||||||    
T  15898199 taattaatattactttcaccactctcaattcaatatattctactttgcatttatgat 15898255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 20189900 - 20189956
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || |||||||| |||||||||||||| || |||||| | ||||||||    
T  20189900 taattaatattactttcatcattctcaattcaatatattccactttacatttatgat 20189956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 22982956 - 22983008
Alignment:
Q  229 aattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||||| ||||||||||||||||| ||||||||  ||||||| ||||||||    
T  22982956 aattaatactactttcatcactctcaatt-aatatttt--actttgcatttatgat 22983008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 31090312 - 31090368
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| |||||||||||| |||| ||  ||||||| ||||||||    
T  31090312 taattaatactactttcaacactctcaattccatatattctactttgcgtttatgat 31090368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 36469194 - 36469138
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| |||||||||| | |||||||||| ||  ||||||| ||||||||    
T  36469194 taattaatactactttcatcacttttaattcaatatattatactttgcatttatgat 36469138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 39212651 - 39212595
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||| ||| ||||||||||| ||  ||||||| ||||||||    
T  39212651 taattaatactactttcatcgctcccaattcaatatattctactttgcatttatgat 39212595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 8e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 117083 - 117170
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgatcacagcaaatgcacaaatatttaacaa 311  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||  ||||||||||  |  ||||||| ||| ||||||||    
T  117083 actataattaatactactttcatcactctcaattcaatatattccactttgtatttatgatcatggagaatgcaccaatttttaacaa 117170  T

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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 491
Target Start/End: Original strand, 15605820 - 15605982
Alignment:
Q  329 aagcaaaatcaactaatatcattaattacatattgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagcta 428  Q
    ||||||||| ||||| ||||||||||||   | ||||||||||| | ||||||  | | | ||| | || |||||||| ||||||| |||||||||||||    
T  15605820 aagcaaaattaactattatcattaattaaccaatgttcaatacaagaaggataagaataataaatatggtgactagcccaagaataagccgccctagcta 15605919  T
Q  429 aagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||| | |||| ||||| || |||||||| |||| ||| |||| || ||| |||||||| ||||    
T  15605920 aagcatgagcaaccatgttcgcttgtctgctaacaaaattcacctcgaagttggaatgtaaag 15605982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 14680490 - 14680361
Alignment:
Q  362 tgttcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaa 461  Q
    ||||||||||| | |||||  || | ||||| |||| ||||||||  |||| |||||||||||| ||||||| |||| ||||| || || ||||||||||    
T  14680490 tgttcaatacaagaaggatgaaaataaaaaatacggtgactagcctgagaacaggccgccctagttaaagtatgagcaaccatgttcgcatgtctcctaa 14680391  T
Q  462 taaacttcaacttgaaattggaatgcaaag 491  Q
     |||||||| || ||| |||||||| ||||    
T  14680390 caaacttcacctcgaagttggaatgtaaag 14680361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 11731565 - 11731657
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    |||||||| ||||  |||| ||||||||||||||| |||| ||||| || ||||| ||||||| |||||||| || ||| |||||||| ||||    
T  11731565 gactagcccaagagcaggctgccctagctaaagtatgagcaaccatgttcgcttgcctcctaacaaacttcacctcgaagttggaatgtaaag 11731657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 15053086 - 15053158
Alignment:
Q  414 aggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatg 486  Q
    |||| ||||||||||||||| |||| | ||| ||||||||||| |||| |||||||| || ||||||||||||    
T  15053086 aggctgccctagctaaagtatgagcaatcatgtttgcttgtcttctaacaaacttcacctcgaaattggaatg 15053158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 34104350 - 34104453
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| ||||| | |||||| |||||||  || |||| ||||| |||||||||||||||| |||||||| || ||| || |||||     
T  34104350 aaaaatacggtgactagcccaagaacatgccgccatagctaagctatgagcaaccatgtttgcttgtctcctaacaaacttcacctcgaagttcgaatgt 34104449  T
Q  488 aaag 491  Q
    ||||    
T  34104450 aaag 34104453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 26356277 - 26356333
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||   |||||||||| ||||||||||| ||||||||    
T  26356277 taattaatactactttcatcacttctaattcaatatatttcactttgcatttatgat 26356333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 491
Target Start/End: Complemental strand, 28107410 - 28107338
Alignment:
Q  419 gccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgcaaag 491  Q
    ||||||||||||||| |||| ||||| |||| ||||||||||| ||||| || || ||| |||||||| ||||    
T  28107410 gccctagctaaagtatgagcaaccatgtttggttgtctcctaacaaactacagctcgaagttggaatgtaaag 28107338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 34803810 - 34803750
Alignment:
Q  224 actataattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||||||| |||||  |||||||||||||||| ||| | ||||| ||||||||    
T  34803810 actataattaatactactttcacaactctcaattcaatatattttattttgcatttatgat 34803750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 2362364 - 2362419
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatga 283  Q
    ||||||||| || |||||||| ||||||||||||||||| ||||||  ||||||||    
T  2362364 taattaataatattttcatcattctcaattcaatattttccactttatttttatga 2362419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 30064048 - 30063995
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttat 281  Q
    ||||||||| || ||||||||||| ||||||||||| || |||||||| |||||    
T  30064048 taattaatattactttcatcactcccaattcaatatattccactttgcatttat 30063995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 33109381 - 33109422
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttca 269  Q
    |||||||||||| |||||||| |||||||||||||| |||||    
T  33109381 taattaatactactttcatcattctcaattcaatatatttca 33109422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 2310387 - 2310331
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| ||  || |||| ||||||||    
T  2310387 taattaatactactttcatcactcccaattcaatatattataccttgcatttatgat 2310331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 14312747 - 14312691
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| ||  |||||||||||||||||||||  ||||||||| | ||||||||    
T  14312747 taattaataatatgttcatcactctcaattcaatacatttcactttacatttatgat 14312691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 15321324 - 15321268
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| || |||||||||||||| ||  ||||||| ||||||||    
T  15321324 taattaatactactttcaacattctcaattcaatatattctactttgcatttatgat 15321268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 15371962 - 15371906
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||| ||||||||||| ||  ||||||| ||||||||    
T  15371962 taattaatactactttcaccactcccaattcaatatattctactttgcatttatgat 15371906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 27443237 - 27443153
Alignment:
Q  386 tcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    ||||||| || | |||||||| ||||| || |||||||||||||  || |||| ||||| || |||| |||||||| ||||||||    
T  27443237 tcaaaaatacagtgactagcccaagaacagaccgccctagctaagctatgagcaaccatgttcgcttctctcctaacaaacttca 27443153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 492 - 389
Alignment:
Q  388 aaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttcaacttgaaattggaatgc 487  Q
    ||||| |||| |||||||| ||  ||||||||||||||||||  || |||| ||||| || ||||||||||||| |||||||| || ||| ||||||||     
T  492 aaaaatacggtgactagcccaaatataggccgccctagctaagctatgagcaaccatgttcgcttgtctcctaacaaacttcatctcgaagttggaatgt 393  T
Q  488 aaag 491  Q
    ||||    
T  392 aaag 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 26621 - 26677
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||    
T  26621 taattaatactactttcatcactcgcaattcaatatattccactttgcatttatgat 26677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 2757 - 2725
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaa 260  Q
    |||||||||||||||||||||||||||||||||    
T  2757 taattaatactaatttcatcactctcaattcaa 2725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 394786 - 394842
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||||||||||||||||| ||| || |||||||  ||||||||    
T  394786 taattaatactactttcatcactctcaattcactatattccactttgtatttatgat 394842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 20449 - 20378
Alignment:
Q  399 gactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    |||||||| ||||| |||  ||||||||||||||| |||  | |||||| ||||||||||||| ||||||||    
T  20449 gactagcccaagaacaggttgccctagctaaagtatgagtaatcatattcgcttgtctcctaacaaacttca 20378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 13444 - 13383
Alignment:
Q  365 tcaatacatggaggatagaactcaaaaacacggcgactagccgaagaataggccgccctagc 426  Q
    |||||||| |||||| | | |||||| |||||| |||||||| ||||| |||||||||||||    
T  13444 tcaatacaaggaggacaaatctcaaagacacggtgactagcccaagaacaggccgccctagc 13383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 8895 - 8948
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttat 281  Q
    ||||||||| || |||||||| |||||||||||||| || |||||||| |||||    
T  8895 taattaatattactttcatcattctcaattcaatatattccactttgcatttat 8948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 10890 - 10834
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| |||||  |||||||||| ||| ||||||| ||||||||    
T  10890 taattaatactactttcaccactcctaattcaatatattttactttgcatttatgat 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 98833 - 98878
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcacttt 273  Q
    ||||||||| || ||||||||||||||||||||||| || ||||||    
T  98833 taattaatattattttcatcactctcaattcaatatattccacttt 98878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 6499 - 6443
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    ||||||||| || ||||| ||||||||||||||||| ||| ||||| | ||||||||    
T  6499 taattaatattactttcaccactctcaattcaatatattttactttacatttatgat 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 5826 - 5882
Alignment:
Q  228 taattaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 284  Q
    |||||||||||| ||||| ||||||||||||||||| ||  ||||| | ||||||||    
T  5826 taattaatactactttcaccactctcaattcaatatattctactttacatttatgat 5882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 44124 - 44208
Alignment:
Q  386 tcaaaaacacggcgactagccgaagaataggccgccctagctaaagtacgagcgaccatatttgcttgtctcctaataaacttca 470  Q
    ||||||| || | |||||||| ||||| || |||||||||||||  || |||| ||||| || |||| |||||||| ||||||||    
T  44124 tcaaaaatacagtgactagcccaagaacagaccgccctagctaagctatgagcaaccatgttcgcttctctcctaacaaacttca 44208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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