View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21472_low_9 (Length: 407)

Name: NF21472_low_9
Description: NF21472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21472_low_9
NF21472_low_9
[»] chr5 (68 HSPs)
chr5 (27-407)||(1722430-1722812)
chr5 (83-407)||(36418202-36418538)
chr5 (83-399)||(13543415-13543740)
chr5 (87-407)||(20728849-20729169)
chr5 (83-233)||(18951289-18951439)
chr5 (86-364)||(18248947-18249234)
chr5 (82-406)||(5734448-5734783)
chr5 (255-406)||(19279027-19279179)
chr5 (87-407)||(26275494-26275810)
chr5 (87-217)||(6336133-6336263)
chr5 (86-232)||(20728517-20728663)
chr5 (87-405)||(35190228-35190546)
chr5 (97-233)||(32660199-32660335)
chr5 (97-251)||(19278705-19278858)
chr5 (83-219)||(14235554-14235688)
chr5 (104-217)||(32660266-32660379)
chr5 (105-399)||(30737748-30738052)
chr5 (97-208)||(36417886-36417997)
chr5 (99-238)||(5734964-5735102)
chr5 (250-407)||(38405198-38405357)
chr5 (102-232)||(30738248-30738377)
chr5 (86-227)||(31813886-31814017)
chr5 (105-364)||(35189922-35190180)
chr5 (83-245)||(13543070-13543235)
chr5 (97-160)||(32459427-32459490)
chr5 (97-159)||(35891263-35891325)
chr5 (83-148)||(26276012-26276077)
chr5 (102-186)||(18951368-18951452)
chr5 (136-238)||(6336310-6336412)
chr5 (164-222)||(35891260-35891318)
chr5 (164-251)||(18237919-18238006)
chr5 (109-160)||(18238339-18238390)
chr5 (164-251)||(32459434-32459521)
chr5 (104-172)||(18237919-18237987)
chr5 (164-233)||(6336150-6336219)
chr5 (264-341)||(38082723-38082800)
chr5 (164-233)||(38405583-38405652)
chr5 (83-191)||(13538455-13538563)
chr5 (169-245)||(18238314-18238390)
chr5 (284-364)||(19278900-19278980)
chr5 (164-216)||(36417893-36417945)
chr5 (193-245)||(41282474-41282526)
chr5 (277-364)||(5734830-5734917)
chr5 (102-153)||(19279239-19279290)
chr5 (102-172)||(1722964-1723034)
chr5 (291-341)||(13543289-13543339)
chr5 (295-341)||(20728734-20728780)
chr5 (196-245)||(14620780-14620829)
chr5 (100-153)||(32660322-32660375)
chr5 (86-187)||(38405569-38405670)
chr5 (193-233)||(35342324-35342364)
chr5 (281-407)||(18320898-18321024)
chr5 (97-140)||(23251658-23251701)
chr5 (277-364)||(26275856-26275943)
chr5 (100-159)||(30738261-30738320)
chr5 (282-341)||(32459552-32459611)
chr5 (97-172)||(34444914-34444989)
chr5 (164-233)||(13538476-13538545)
chr5 (164-217)||(19279235-19279288)
chr5 (165-234)||(20728536-20728605)
chr5 (100-149)||(35189976-35190025)
chr5 (277-330)||(38405436-38405489)
chr5 (193-233)||(8695010-8695050)
chr5 (193-233)||(9919239-9919279)
chr5 (147-211)||(18321223-18321287)
chr5 (193-233)||(19659458-19659498)
chr5 (193-233)||(20079215-20079255)
chr5 (193-233)||(31710179-31710219)
[»] chr7 (111 HSPs)
chr7 (83-406)||(27995047-27995379)
chr7 (85-407)||(39958999-39959330)
chr7 (86-385)||(28256482-28256791)
chr7 (83-405)||(5559093-5559426)
chr7 (83-407)||(33235356-33235690)
chr7 (92-407)||(42990495-42990820)
chr7 (87-407)||(35215128-35215458)
chr7 (104-407)||(1348963-1349269)
chr7 (255-395)||(1441124-1441264)
chr7 (84-239)||(20366520-20366675)
chr7 (86-232)||(33879505-33879651)
chr7 (102-218)||(21412931-21413047)
chr7 (87-238)||(19925321-19925472)
chr7 (96-407)||(8039966-8040271)
chr7 (87-341)||(5805028-5805291)
chr7 (83-232)||(5805583-5805731)
chr7 (83-238)||(23150625-23150780)
chr7 (97-342)||(35214806-35215060)
chr7 (87-233)||(21412856-21413002)
chr7 (86-208)||(31893489-31893611)
chr7 (86-233)||(36566267-36566414)
chr7 (83-238)||(20366035-20366188)
chr7 (87-238)||(34951218-34951368)
chr7 (83-208)||(5559631-5559755)
chr7 (107-229)||(29591047-29591171)
chr7 (105-238)||(33235042-33235175)
chr7 (101-341)||(1286374-1286621)
chr7 (255-347)||(5075450-5075542)
chr7 (97-233)||(21433144-21433280)
chr7 (97-216)||(1346480-1346599)
chr7 (97-219)||(40904691-40904813)
chr7 (83-346)||(23679397-23679659)
chr7 (83-234)||(19925091-19925241)
chr7 (86-233)||(34951450-34951597)
chr7 (100-217)||(36566341-36566458)
chr7 (100-197)||(33879480-33879577)
chr7 (100-187)||(40904754-40904841)
chr7 (86-208)||(41020137-41020258)
chr7 (87-311)||(1286706-1286936)
chr7 (87-172)||(27995569-27995654)
chr7 (83-208)||(31893236-31893361)
chr7 (148-238)||(4187673-4187763)
chr7 (255-407)||(5805360-5805511)
chr7 (148-341)||(10619851-10620052)
chr7 (82-208)||(22876867-22876992)
chr7 (104-172)||(10619867-10619935)
chr7 (300-407)||(20184087-20184195)
chr7 (165-233)||(21433323-21433391)
chr7 (100-172)||(31175946-31176018)
chr7 (277-364)||(1348830-1348917)
chr7 (97-208)||(1441446-1441557)
chr7 (97-251)||(20183769-20183923)
chr7 (102-172)||(20101887-20101956)
chr7 (102-208)||(34951415-34951521)
chr7 (86-175)||(8039652-8039741)
chr7 (105-217)||(21433278-21433391)
chr7 (100-209)||(31893437-31893537)
chr7 (87-208)||(39958677-39958798)
chr7 (100-172)||(1286433-1286505)
chr7 (277-365)||(5559475-5559563)
chr7 (106-217)||(4187515-4187626)
chr7 (126-237)||(31175941-31176052)
chr7 (275-350)||(42990880-42990955)
chr7 (102-160)||(4187691-4187749)
chr7 (101-175)||(21433208-21433282)
chr7 (164-233)||(1441481-1441550)
chr7 (164-233)||(8039670-8039739)
chr7 (277-341)||(8039835-8039900)
chr7 (87-219)||(20101813-20101943)
chr7 (100-144)||(28256954-28256998)
chr7 (164-251)||(28104304-28104391)
chr7 (162-233)||(31893255-31893326)
chr7 (163-233)||(1349200-1349270)
chr7 (83-153)||(1440992-1441062)
chr7 (86-196)||(5075337-5075446)
chr7 (102-200)||(19925170-19925267)
chr7 (255-341)||(20366408-20366494)
chr7 (97-159)||(28104297-28104359)
chr7 (317-407)||(29590806-29590896)
chr7 (167-233)||(29591105-29591171)
chr7 (164-233)||(22876902-22876970)
chr7 (87-148)||(36566526-36566587)
chr7 (164-233)||(39958694-39958763)
chr7 (164-233)||(40904698-40904767)
chr7 (104-172)||(6220365-6220432)
chr7 (281-341)||(31175825-31175885)
chr7 (193-233)||(42888993-42889033)
chr7 (164-233)||(1346487-1346556)
chr7 (160-229)||(5075351-5075420)
chr7 (87-200)||(28256958-28257071)
chr7 (201-233)||(4187624-4187656)
chr7 (285-341)||(20183963-20184019)
chr7 (86-238)||(21413093-21413244)
chr7 (264-364)||(28256795-28256894)
chr7 (285-341)||(29590972-29591028)
chr7 (193-245)||(41113509-41113561)
chr7 (104-238)||(6220359-6220492)
chr7 (100-159)||(29591057-29591118)
chr7 (195-245)||(41107269-41107319)
chr7 (167-233)||(42991056-42991122)
chr7 (104-153)||(4187573-4187622)
chr7 (163-216)||(6220440-6220493)
chr7 (103-148)||(10620239-10620284)
chr7 (103-144)||(19925230-19925271)
chr7 (165-238)||(27995563-27995636)
chr7 (164-233)||(31893524-31893593)
chr7 (100-153)||(33235097-33235150)
chr7 (196-245)||(38427754-38427803)
chr7 (193-233)||(35600079-35600119)
chr7 (193-233)||(38427795-38427835)
chr7 (193-245)||(47219277-47219329)
[»] chr8 (86 HSPs)
chr8 (84-405)||(25737090-25737419)
chr8 (94-399)||(8714175-8714490)
chr8 (86-383)||(23553343-23553650)
chr8 (87-407)||(30576473-30576803)
chr8 (83-406)||(39701206-39701540)
chr8 (112-406)||(6235747-6236048)
chr8 (84-406)||(9276805-9277129)
chr8 (82-341)||(8713830-8714098)
chr8 (83-238)||(9770778-9770933)
chr8 (86-347)||(31169361-31169628)
chr8 (100-238)||(39700887-39701025)
chr8 (98-238)||(36359901-36360041)
chr8 (100-364)||(40553105-40553369)
chr8 (97-405)||(4613739-4614057)
chr8 (83-245)||(16197014-16197176)
chr8 (102-251)||(25730102-25730252)
chr8 (83-245)||(29794243-29794405)
chr8 (196-407)||(44040860-44041081)
chr8 (101-238)||(44041280-44041417)
chr8 (104-251)||(25737588-25737736)
chr8 (255-405)||(16197351-16197502)
chr8 (87-217)||(45017934-45018062)
chr8 (83-217)||(36360088-36360222)
chr8 (97-233)||(43423090-43423225)
chr8 (83-190)||(29792558-29792665)
chr8 (83-238)||(45017732-45017887)
chr8 (87-233)||(43422847-43422993)
chr8 (86-238)||(16208682-16208834)
chr8 (100-208)||(43422920-43423028)
chr8 (83-208)||(14871369-14871496)
chr8 (86-341)||(40552750-40553014)
chr8 (102-172)||(5358647-5358717)
chr8 (165-251)||(13771846-13771932)
chr8 (256-385)||(14871080-14871210)
chr8 (164-238)||(35434322-35434396)
chr8 (83-251)||(9276467-9276636)
chr8 (97-233)||(39700823-39700960)
chr8 (83-159)||(13771878-13771954)
chr8 (105-172)||(13771425-13771492)
chr8 (104-251)||(23553847-23553994)
chr8 (112-219)||(14870954-14871060)
chr8 (86-177)||(36314700-36314791)
chr8 (99-172)||(34686896-34686969)
chr8 (83-147)||(23179033-23179096)
chr8 (97-233)||(40553296-40553432)
chr8 (83-341)||(30576137-30576404)
chr8 (97-172)||(35433896-35433971)
chr8 (83-208)||(11113536-11113661)
chr8 (264-337)||(14871241-14871314)
chr8 (104-201)||(43423062-43423159)
chr8 (100-208)||(6236251-6236359)
chr8 (164-251)||(5358649-5358736)
chr8 (164-238)||(34686890-34686964)
chr8 (97-159)||(35434341-35434403)
chr8 (163-233)||(41190328-41190398)
chr8 (83-208)||(9770546-9770671)
chr8 (83-148)||(11113729-11113794)
chr8 (164-233)||(36314704-36314773)
chr8 (101-217)||(9770624-9770731)
chr8 (165-233)||(29030175-29030243)
chr8 (284-363)||(6236096-6236175)
chr8 (158-233)||(11113551-11113626)
chr8 (100-159)||(25730134-25730193)
chr8 (100-159)||(25737620-25737679)
chr8 (97-148)||(40553261-40553312)
chr8 (97-160)||(44040822-44040884)
chr8 (264-346)||(9276658-9276740)
chr8 (286-364)||(23179160-23179238)
chr8 (160-234)||(43422860-43422934)
chr8 (293-359)||(44041150-44041216)
chr8 (264-337)||(5358954-5359027)
chr8 (100-149)||(9770674-9770723)
chr8 (264-341)||(16197204-16197281)
chr8 (277-341)||(25730003-25730067)
chr8 (277-341)||(25737489-25737553)
chr8 (165-229)||(36360136-36360200)
chr8 (370-405)||(25729898-25729933)
chr8 (164-251)||(35433903-35433990)
chr8 (165-219)||(13771425-13771479)
chr8 (164-214)||(29792594-29792644)
chr8 (87-209)||(41190292-41190413)
chr8 (264-341)||(23553749-23553825)
chr8 (164-233)||(45017976-45018045)
chr8 (193-233)||(13797232-13797272)
chr8 (285-341)||(34686778-34686834)
chr8 (277-341)||(39701073-39701136)
[»] chr6 (56 HSPs)
chr6 (83-407)||(11527849-11528183)
chr6 (87-407)||(17179614-17179943)
chr6 (171-407)||(17132023-17132265)
chr6 (87-336)||(2839937-2840186)
chr6 (83-238)||(17180122-17180277)
chr6 (83-238)||(20575398-20575553)
chr6 (87-233)||(32417459-32417605)
chr6 (87-233)||(32423300-32423446)
chr6 (105-209)||(32417537-32417641)
chr6 (105-209)||(32423378-32423482)
chr6 (97-208)||(2839625-2839736)
chr6 (86-208)||(9902278-9902400)
chr6 (89-238)||(10862570-10862720)
chr6 (84-250)||(24139479-24139644)
chr6 (86-233)||(16168679-16168826)
chr6 (196-340)||(17131620-17131773)
chr6 (87-208)||(11527526-11527647)
chr6 (279-406)||(9902090-9902218)
chr6 (83-208)||(16168451-16168576)
chr6 (105-364)||(10962746-10963014)
chr6 (83-191)||(20575677-20575783)
chr6 (83-238)||(32417696-32417851)
chr6 (83-238)||(32423537-32423692)
chr6 (100-208)||(16168644-16168752)
chr6 (97-160)||(9901959-9902022)
chr6 (164-251)||(10407316-10407403)
chr6 (148-218)||(20575600-20575670)
chr6 (100-158)||(20575600-20575658)
chr6 (255-407)||(24139157-24139311)
chr6 (108-208)||(9946718-9946818)
chr6 (277-341)||(28630497-28630561)
chr6 (101-157)||(32417593-32417649)
chr6 (101-157)||(32423434-32423490)
chr6 (263-341)||(9946586-9946664)
chr6 (286-407)||(28630318-28630428)
chr6 (277-332)||(24139388-24139443)
chr6 (168-233)||(9946753-9946818)
chr6 (164-233)||(11527543-11527612)
chr6 (164-233)||(16168472-16168541)
chr6 (277-341)||(17180012-17180076)
chr6 (162-233)||(9902313-9902384)
chr6 (164-238)||(9901966-9902040)
chr6 (101-159)||(10407313-10407371)
chr6 (164-229)||(2839632-2839697)
chr6 (196-233)||(10963161-10963198)
chr6 (202-239)||(32417641-32417678)
chr6 (202-239)||(32423482-32423519)
chr6 (193-233)||(6503615-6503655)
chr6 (100-148)||(9946718-9946766)
chr6 (164-251)||(10407712-10407800)
chr6 (105-173)||(10963161-10963229)
chr6 (264-364)||(11527703-11527803)
chr6 (111-159)||(17132217-17132265)
chr6 (193-233)||(17428229-17428269)
chr6 (193-233)||(17515004-17515044)
chr6 (137-173)||(24139038-24139074)
[»] scaffold0746 (3 HSPs)
scaffold0746 (97-400)||(21-331)
scaffold0746 (98-251)||(505-658)
scaffold0746 (277-341)||(406-470)
[»] chr2 (63 HSPs)
chr2 (86-405)||(11871557-11871886)
chr2 (97-364)||(27893409-27893685)
chr2 (100-217)||(30907136-30907253)
chr2 (84-219)||(30907061-30907195)
chr2 (158-407)||(20535502-20535762)
chr2 (97-219)||(31263924-31264046)
chr2 (83-227)||(30907308-30907453)
chr2 (94-405)||(39301639-39301951)
chr2 (164-405)||(15506311-15506562)
chr2 (97-216)||(16781054-16781174)
chr2 (86-238)||(34336023-34336175)
chr2 (86-315)||(27893023-27893252)
chr2 (97-238)||(36196487-36196626)
chr2 (100-208)||(31263987-31264095)
chr2 (97-233)||(34336262-34336398)
chr2 (83-200)||(37543101-37543218)
chr2 (105-219)||(8260392-8260506)
chr2 (86-172)||(42117196-42117282)
chr2 (97-238)||(31264142-31264285)
chr2 (101-209)||(34336226-34336334)
chr2 (98-210)||(34429681-34429793)
chr2 (104-208)||(32341459-32341564)
chr2 (97-208)||(41265258-41265369)
chr2 (86-238)||(19080617-19080769)
chr2 (264-364)||(19080804-19080904)
chr2 (280-364)||(36196352-36196436)
chr2 (129-208)||(20535967-20536046)
chr2 (97-208)||(37542948-37543057)
chr2 (164-238)||(15506052-15506126)
chr2 (83-149)||(21813191-21813257)
chr2 (83-208)||(39376159-39376283)
chr2 (112-217)||(39376351-39376456)
chr2 (100-148)||(5116907-5116955)
chr2 (163-233)||(30907079-30907149)
chr2 (84-141)||(13315808-13315865)
chr2 (100-157)||(15506048-15506105)
chr2 (87-148)||(16780928-16780989)
chr2 (164-229)||(34429687-34429752)
chr2 (165-233)||(31263932-31264000)
chr2 (162-233)||(32341397-32341468)
chr2 (162-233)||(37543128-37543199)
chr2 (299-407)||(19080950-19081057)
chr2 (83-160)||(20535487-20535565)
chr2 (318-407)||(27893273-27893363)
chr2 (264-341)||(20535831-20535908)
chr2 (83-219)||(32341378-32341515)
chr2 (193-245)||(1106516-1106568)
chr2 (165-233)||(8260392-8260460)
chr2 (193-245)||(8396743-8396795)
chr2 (102-166)||(39301381-39301444)
chr2 (105-148)||(20535967-20536010)
chr2 (97-144)||(41265108-41265155)
chr2 (191-233)||(3430828-3430870)
chr2 (195-245)||(34253041-34253091)
chr2 (105-150)||(5116963-5117008)
chr2 (165-210)||(5116963-5117008)
chr2 (105-174)||(19081055-19081124)
chr2 (164-209)||(21813212-21813257)
chr2 (87-143)||(15505943-15505999)
chr2 (165-233)||(19081056-19081124)
chr2 (101-141)||(37543100-37543140)
chr2 (186-238)||(42117190-42117242)
chr2 (121-173)||(45124263-45124315)
[»] chr1 (60 HSPs)
chr1 (126-385)||(49650844-49651096)
chr1 (87-364)||(27351041-27351330)
chr1 (83-219)||(34254485-34254621)
chr1 (131-407)||(8902795-8903081)
chr1 (83-233)||(44964062-44964211)
chr1 (255-406)||(34254821-34254971)
chr1 (84-302)||(48352652-48352879)
chr1 (97-238)||(10686697-10686838)
chr1 (105-217)||(44964018-44964130)
chr1 (86-233)||(17898836-17898983)
chr1 (277-405)||(29418851-29418980)
chr1 (86-200)||(11897831-11897945)
chr1 (83-364)||(39302546-39302826)
chr1 (97-239)||(29419027-29419173)
chr1 (105-233)||(1765916-1766044)
chr1 (100-215)||(17898794-17898909)
chr1 (255-407)||(10686363-10686516)
chr1 (97-208)||(10685848-10685959)
chr1 (165-251)||(8903249-8903335)
chr1 (105-209)||(35701450-35701553)
chr1 (88-198)||(49650564-49650674)
chr1 (263-407)||(4772268-4772412)
chr1 (164-405)||(4030310-4030560)
chr1 (105-172)||(8902829-8902896)
chr1 (107-172)||(1765763-1765828)
chr1 (105-208)||(1765881-1765984)
chr1 (86-159)||(2965480-2965553)
chr1 (87-148)||(4772161-4772222)
chr1 (83-172)||(8903268-8903357)
chr1 (255-364)||(27351392-27351501)
chr1 (164-233)||(49650580-49650649)
chr1 (100-148)||(4772650-4772698)
chr1 (97-208)||(27351548-27351659)
chr1 (165-238)||(2965499-2965572)
chr1 (102-171)||(34254564-34254633)
chr1 (115-220)||(35701400-35701504)
chr1 (100-153)||(44964022-44964075)
chr1 (277-362)||(49650754-49650839)
chr1 (104-183)||(4030310-4030390)
chr1 (165-233)||(11897850-11897918)
chr1 (277-364)||(39302454-39302541)
chr1 (105-148)||(49651014-49651057)
chr1 (101-159)||(44963903-44963961)
chr1 (164-233)||(10685855-10685924)
chr1 (164-233)||(34254506-34254575)
chr1 (83-172)||(39302317-39302406)
chr1 (281-341)||(8903150-8903210)
chr1 (193-233)||(26069789-26069829)
chr1 (162-214)||(39302336-39302388)
chr1 (291-341)||(34254701-34254751)
chr1 (278-364)||(37663236-37663322)
chr1 (105-219)||(44963847-44963961)
chr1 (264-341)||(4772517-4772594)
chr1 (164-213)||(27351603-27351652)
chr1 (277-330)||(48352389-48352442)
chr1 (192-233)||(49094667-49094708)
chr1 (193-233)||(23767618-23767658)
chr1 (193-233)||(32373757-32373797)
chr1 (193-233)||(36157635-36157675)
chr1 (193-233)||(49973978-49974018)
[»] chr4 (81 HSPs)
chr4 (88-364)||(52181706-52181991)
chr4 (164-407)||(52567750-52568001)
chr4 (86-407)||(30542942-30543254)
chr4 (102-238)||(26329930-26330066)
chr4 (87-234)||(43098399-43098546)
chr4 (83-233)||(26329995-26330145)
chr4 (86-394)||(8408340-8408649)
chr4 (83-193)||(19631749-19631859)
chr4 (104-233)||(2788963-2789092)
chr4 (104-229)||(9320017-9320142)
chr4 (97-405)||(31229254-31229568)
chr4 (100-208)||(2788928-2789036)
chr4 (83-233)||(22025290-22025439)
chr4 (97-238)||(8408843-8408984)
chr4 (106-214)||(35046437-35046545)
chr4 (85-160)||(42116069-42116144)
chr4 (135-407)||(5387425-5387706)
chr4 (87-233)||(41735743-41735888)
chr4 (99-208)||(41735814-41735923)
chr4 (87-208)||(52183437-52183558)
chr4 (102-238)||(5387131-5387267)
chr4 (100-208)||(43098365-43098473)
chr4 (104-209)||(2909182-2909287)
chr4 (83-208)||(52865942-52866067)
chr4 (102-201)||(2788795-2788894)
chr4 (86-238)||(43098171-43098319)
chr4 (277-404)||(52866171-52866298)
chr4 (86-160)||(52567732-52567806)
chr4 (87-204)||(23085224-23085340)
chr4 (101-148)||(44916324-44916371)
chr4 (86-149)||(52866366-52866429)
chr4 (105-219)||(52568197-52568311)
chr4 (86-159)||(19632248-19632320)
chr4 (126-218)||(35046550-35046642)
chr4 (87-158)||(2508252-2508323)
chr4 (164-341)||(19632118-19632302)
chr4 (86-364)||(19681184-19681464)
chr4 (104-189)||(22025274-22025358)
chr4 (100-153)||(26329826-26329879)
chr4 (105-158)||(35046550-35046603)
chr4 (100-160)||(26329948-26330008)
chr4 (165-233)||(52568243-52568311)
chr4 (255-334)||(52182046-52182125)
chr4 (100-167)||(52568189-52568256)
chr4 (164-233)||(19631770-19631839)
chr4 (165-245)||(2508671-2508751)
chr4 (100-172)||(22025116-22025188)
chr4 (105-172)||(2508684-2508751)
chr4 (162-233)||(9320015-9320086)
chr4 (105-172)||(35023969-35024036)
chr4 (88-228)||(36890399-36890542)
chr4 (293-364)||(52568047-52568118)
chr4 (164-245)||(2508269-2508348)
chr4 (139-217)||(26329805-26329883)
chr4 (164-238)||(36890630-36890704)
chr4 (164-233)||(2788797-2788866)
chr4 (264-365)||(30542796-30542897)
chr4 (177-230)||(42115652-42115705)
chr4 (165-238)||(42116051-42116124)
chr4 (164-233)||(52183472-52183541)
chr4 (277-341)||(31229639-31229703)
chr4 (119-159)||(42115654-42115694)
chr4 (83-130)||(26329762-26329809)
chr4 (102-153)||(35046493-35046544)
chr4 (105-148)||(36890540-36890583)
chr4 (102-153)||(36890655-36890706)
chr4 (162-209)||(52866366-52866413)
chr4 (248-302)||(19631918-19631972)
chr4 (165-238)||(22025121-22025194)
chr4 (83-140)||(41735958-41736015)
chr4 (164-213)||(52865963-52866012)
chr4 (100-140)||(2788853-2788893)
chr4 (83-131)||(22025052-22025100)
chr4 (105-145)||(23085172-23085212)
chr4 (193-233)||(25730137-25730177)
chr4 (201-233)||(26329881-26329913)
chr4 (193-233)||(31617639-31617679)
chr4 (193-233)||(33174224-33174264)
chr4 (193-229)||(33693290-33693326)
chr4 (164-208)||(44916324-44916368)
chr4 (193-233)||(48551721-48551761)
[»] chr3 (47 HSPs)
chr3 (148-407)||(31247178-31247446)
chr3 (83-245)||(31247620-31247782)
chr3 (256-407)||(3087207-3087359)
chr3 (257-407)||(53783197-53783348)
chr3 (101-206)||(3087086-3087190)
chr3 (87-385)||(35555516-35555827)
chr3 (97-251)||(4276135-4276289)
chr3 (255-365)||(24707574-24707684)
chr3 (277-364)||(35555831-35555918)
chr3 (85-238)||(21376554-21376707)
chr3 (86-187)||(50530235-50530336)
chr3 (247-347)||(14629375-14629474)
chr3 (104-217)||(54456799-54456912)
chr3 (97-208)||(3088106-3088217)
chr3 (84-183)||(21377037-21377136)
chr3 (264-341)||(14629540-14629617)
chr3 (97-229)||(54456847-54456979)
chr3 (164-233)||(3088141-3088210)
chr3 (83-148)||(14629271-14629336)
chr3 (164-233)||(21377047-21377116)
chr3 (102-159)||(31247192-31247248)
chr3 (100-153)||(54456803-54456856)
chr3 (102-173)||(5505728-5505800)
chr3 (101-148)||(14964737-14964784)
chr3 (101-172)||(24707471-24707542)
chr3 (284-364)||(53783071-53783151)
chr3 (97-148)||(35555987-35556038)
chr3 (86-148)||(50530397-50530459)
chr3 (264-341)||(4276311-4276388)
chr3 (87-208)||(4276629-4276741)
chr3 (163-251)||(19153883-19153972)
chr3 (86-159)||(54456660-54456733)
chr3 (264-364)||(21376742-21376842)
chr3 (255-385)||(21376846-21376976)
chr3 (164-238)||(54456678-54456752)
chr3 (83-144)||(18745502-18745563)
chr3 (192-233)||(31122806-31122847)
chr3 (164-233)||(50530253-50530322)
chr3 (196-245)||(53925939-53925988)
chr3 (104-159)||(19153884-19153940)
chr3 (193-233)||(19664438-19664478)
chr3 (193-233)||(19664684-19664724)
chr3 (193-233)||(26455479-26455519)
chr3 (193-245)||(32650777-32650829)
chr3 (164-208)||(35555987-35556031)
chr3 (193-233)||(53196157-53196197)
chr3 (193-233)||(55164319-55164359)
[»] scaffold0070 (3 HSPs)
scaffold0070 (247-400)||(28872-29024)
scaffold0070 (98-251)||(28545-28698)
scaffold0070 (269-341)||(28725-28797)
[»] scaffold0027 (6 HSPs)
scaffold0027 (255-398)||(9715-9859)
scaffold0027 (85-198)||(9896-10009)
scaffold0027 (86-208)||(9383-9505)
scaffold0027 (164-233)||(9921-9990)
scaffold0027 (285-364)||(9582-9661)
scaffold0027 (164-234)||(9401-9471)
[»] scaffold0019 (3 HSPs)
scaffold0019 (86-217)||(124132-124262)
scaffold0019 (83-233)||(124345-124495)
scaffold0019 (100-190)||(124328-124418)
[»] scaffold0041 (3 HSPs)
scaffold0041 (97-219)||(45205-45327)
scaffold0041 (100-187)||(45177-45264)
scaffold0041 (164-233)||(45251-45320)
[»] scaffold0374 (5 HSPs)
scaffold0374 (97-160)||(16173-16236)
scaffold0374 (163-238)||(16590-16665)
scaffold0374 (83-152)||(16059-16128)
scaffold0374 (104-159)||(16609-16664)
scaffold0374 (164-238)||(16180-16254)
[»] scaffold0004 (1 HSPs)
scaffold0004 (193-233)||(218782-218822)


Alignment Details
Target: chr5 (Bit Score: 328; Significance: 0; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 27 - 407
Target Start/End: Original strand, 1722430 - 1722812
Alignment:
Q  27 ggttaacgtcgttcacttcttaagtgtcgttgcaaacatatttattatttatgcggggccaaataccatgtttggtccttttagtttgacaaaattttca 126  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||    
T  1722430 ggttaacgtcgttcgcttcttaagtgtcgttgcaaacatatttattatttatgcggggccaaataccatgtttggtccttttagtttaacaaaattcaca 1722529  T
Q  127 agttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatt 226  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  1722530 agttagtcctttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaagtttcaaaagtttcaaatatgtcatt 1722629  T
Q  227 ttagtttataaatcatt--tctctgttgtgagttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaa 324  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1722630 ttagtttataaattatttctctctgttgtgagttaataattaattgatgttaatgtagccgttaaattgttgacttggatcaaaacgctgccttttaaaa 1722729  T
Q  325 gctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1722730 gcttcagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaatgtcgtttaatagtgctagaaaga 1722812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 83 - 407
Target Start/End: Complemental strand, 36418538 - 36418202
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||  | |||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||| || ||| | |||||||||||||||||||    
T  36418538 ggccaaatatgacgtttggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataatt 36418439  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgt-----------tgtgagttaataattaattga 271  Q
     |||||||| |||||||| |||||||||||||||||| ||| |||||||| |||||  ||||| | ||           ||| ||||||||||||  |||    
T  36418438 ttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccccctcatgtcagttaataattagctga 36418339  T
Q  272 tattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcatt 370  Q
    |  | ||||||||||||| ||||||||||| ||||||||| ||  ||||||||||||| | | |||||||  |||| || |||  |||||||| ||||||    
T  36418338 tgctgatgtagccgttaagttgttgacttgaatcaaaacgttgtcttttaaaagctccggtgagtcaaaacattacgtttaatcgtcacaaatgatcatt 36418239  T
Q  371 ttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
     ||  | ||||||||||||||||||||||||||||||    
T  36418238 ctagtattataaatgtcgtttaatagtgctagaaaga 36418202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 83 - 399
Target Start/End: Complemental strand, 13543740 - 13543415
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  |||  || ||||||||||||| |||| |||| |||||  ||||| ||||||||||||| || |||| |||||||||||  | ||||    
T  13543740 ggccaaataccacttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtttggaagaatt 13543641  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgata 273  Q
    || |||||||||||||||||||||||||||||||||| ||  ||||| || |||||  ||||| |||||         || ||||||||||||||||||     
T  13543640 cttaagttaatcctttaaatttcaaaagtttcaaataggttcttttacttgataaactatttcactgttacctatgctgtcagttaataattaattgatg 13543541  T
Q  274 ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcatttta 373  Q
    || ||||| ||||||| ||||||||||||||||||| | ||  ||||||||||| || ||| ||||||  |||| || |||| ||| |||||||||| ||    
T  13543540 ttgatgtaaccgttaagttgttgacttggatcaaaatgttgtcttttaaaagcttcaaggtatcaaaacattacgtttaatggtcaaaaatatcattcta 13543441  T
Q  374 tcactataaatgtcgtttaatagtgc 399  Q
     |||||||||||||||||||||||||    
T  13543440 gcactataaatgtcgtttaatagtgc 13543415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 87 - 407
Target Start/End: Complemental strand, 20729169 - 20728849
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| || |||||||||||||||||||| |||||| ||||||||||||||||| |||         ||||||||| |||||||||||||| |||| |||    
T  20729169 aaatatcacgtttggtccttttagtttgataaaattatcaagttagtcctttaaattt---------taaatagatccttttagtttgacagaattttca 20729079  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgatattaa 277  Q
    ||||| |||||||||||| |||||||||||||| ||| |||||||| |||||  ||||| |         | |||| || |||||||||| | ||  | |    
T  20729078 agttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattacccattttgtcagataataattaact-atgctga 20728980  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatca 376  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||  || |||  |||||||| |||||| || ||    
T  20728979 tgtagctgttaagttgttgactttgatcaaaacgctgcattttaaaagctccagggtgtcaaaacgttaagtttaattgtcacaaatgatcattctagca 20728880  T
Q  377 ctataaatgtcgtttaatagtgctagaaaga 407  Q
    |||||||||| || ||||| |||||||||||    
T  20728879 ctataaatgttgtgtaatattgctagaaaga 20728849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 233
Target Start/End: Original strand, 18951289 - 18951439
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| ||  ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  18951289 ggccaaataacacatttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaatt 18951388  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||| |||||||| ||| |||||||| ||||| |||||||||||||    
T  18951389 ctcaagttagtcctttaagttttaaaagttttaaataggtcattttagttt 18951439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 86 - 364
Target Start/End: Original strand, 18248947 - 18249234
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||  ||||||||||||||||||| | |||||| |||||| || |||| ||||  |||||||||| ||  | |||||||||| ||| |||||||    
T  18248947 caaataccacttttggtccttttagtttgatagaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtttaacagaattctc 18249046  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatatta 276  Q
    |||||| || ||||| |||||||||||| ||||| ||| |||||||| |||||  ||||         | ||| ||| | ||||||||||| | ||| |     
T  18249047 aagttagtcatttaagtttcaaaagttttaaataggtctttttagttgataaactatttcatcgttacccctgctgtcaattaataattaactaatactg 18249146  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||||||||| | ||||||| ||||||||||| |||||||||||||||||| |||||||||||| |||||||| |||  ||||||||    
T  18249147 atgtagccgttgagttgttgatttggatcaaaatgctgcattttaaaagctctagggtgtcaaaacgttacatttaatagtcacaaat 18249234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 82 - 406
Target Start/End: Original strand, 5734448 - 5734783
Alignment:
Q  82 gggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataat 181  Q
    |||||||||| ||||||||||||||||| ||||||  |||||| |||||| | ||||||||||  ||||||| || ||  |  ||||| ||||||| |||    
T  5734448 gggccaaatatcatgtttggtccttttaatttgactgaatttttaagttacttctttaagttttgaaagtttcaattatgtcattttaatttgacagaat 5734547  T
Q  182 tctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgat 272  Q
    ||  ||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||  ||||         | ||| ||| ||||||||||||| | ||    
T  5734548 tcctaagtt-atcctttaagttttaaaagtttcaaataagtcattttagttaataaactatttcaccgttacccctgctgtcagttaataattaactaat 5734646  T
Q  273 a---ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atca 368  Q
    |    | ||||||||||||| || ||||||| |||||||||| ||   ||||||||||||| |||||||||| ||||| || |||  |||||||| ||||    
T  5734647 aatgctgatgtagccgttaagtttttgactttgatcaaaacgttg-tctttaaaagctccaaggtgtcaaaacgttacgtttaatcgtcacaaatgatca 5734745  T
Q  369 ttttatcactataaatgtcgtttaatagtgctagaaag 406  Q
    || || || |||||||||||||||||||||||||||||    
T  5734746 ttctagcaatataaatgtcgtttaatagtgctagaaag 5734783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 255 - 406
Target Start/End: Complemental strand, 19279179 - 19279027
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    |||||||||||||||||| || ||||||  ||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||  ||||||| |||    
T  19279179 agttaataattaattgatgttgatgtagttgttaagttgttaacttggatcaaaacgttgcattttaaaatctccagggtgtcaaaacattacatttaat 19279080  T
Q  355 gatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaag 406  Q
    | ||| |||| |||| | || ||||||||||||||||||||||||||||||||    
T  19279079 ggtcataaatgatcactctagcactataaatgtcgtttaatagtgctagaaag 19279027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 87 - 407
Target Start/End: Original strand, 26275494 - 26275810
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| || ||||||| |||||||||||||| |||||  |||||||| ||||||||||||||||||| ||||||||  ||||||||||||  ||||| ||    
T  26275494 aaatatcacgtttggtacttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattccca 26275593  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt----gtgagttaataattaattgatattaatgtag 282  Q
    ||||| || || ||         |||||||||| ||  |||||||| | |||  |||||  ||||    || ||||||||| ||||||||  | ||||||    
T  26275594 agttagtcattcaa---------gtttcaaataggttcttttagttgacaaactatttcattgttacctgtcagttaataactaattgatgctcatgtag 26275684  T
Q  283 ccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactata 381  Q
     |||||| ||||| |||| |||||||| | ||| |||||||||||| ||| |||||||| ||||| |||| || |||||||| |||||| || |||||||    
T  26275685 tcgttaagttgttaacttagatcaaaatgatgccttttaaaagctctaggatgtcaaaaagttacgttcagtggtcacaaatgatcattctagcactata 26275784  T
Q  382 aatgtcgtttaatagtgctagaaaga 407  Q
    |||| |||| ||||||||||||||||    
T  26275785 aatgacgttcaatagtgctagaaaga 26275810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 6336133 - 6336263
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||| || ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||| | ||||  ||    
T  6336133 aaataccattttcggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttcca 6336232  T
Q  187 agttaatcctttaaatttcaaaagtttcaaa 217  Q
    ||||| |||||||| ||||||||||||||||    
T  6336233 agttagtcctttaagtttcaaaagtttcaaa 6336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 20728517 - 20728663
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||  ||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| || || ||| | |||||||||| ||| |||||||    
T  20728517 caaataccacttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctc 20728616  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtt 232  Q
    |||||| |||||||| ||| |||||||||||||| ||| ||||||||    
T  20728617 aagttagtcctttaagttttaaaagtttcaaatatgtctttttagtt 20728663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 87 - 405
Target Start/End: Complemental strand, 35190546 - 35190228
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| || |||||||||||||| ||||||| ||||||||||||| | ||||||||||  ||||||| || ||| | |||||||||||||| ||||||||    
T  35190546 aaatatcacgtttggtccttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctca 35190447  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgatattaa 277  Q
    | ||  || ||||| ||||||  |          ||| |||||||| |||||  ||||| |         |||||| ||||||||||||| ||||  | |    
T  35190446 aatttgtcttttaagtttcaattg----------gtctttttagttgataaactatttcaccgttacccttgttgtcagttaataattaactgatgctga 35190357  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatca 376  Q
    | |||| ||||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||| || |||  || ||||| |||||| || ||    
T  35190356 tttagcggttaatttgttgactttgatcaaaatgctgccttttaaaagcttcagggtgtcaaaatgttacgtttaatcgtcgcaaatgatcattctacca 35190257  T
Q  377 ctataaatgtcgtttaatagtgctagaaa 405  Q
    |||||||||||||||||||||||| ||||    
T  35190256 ctataaatgtcgtttaatagtgcttgaaa 35190228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 32660199 - 32660335
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||| ||||||||| ||| |||||  |||||| ||||||||||||| ||||||| || ||  |||||||||||| ||| ||||||||||||| ||||    
T  32660199 tttggtctttttagttttacataatttctaagttaatcctttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagtcct 32660298  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||| |||||||||||||||||| |||||||||||||    
T  32660299 ttaagtttcaaaagtttcaaataggtcattttagttt 32660335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 251
Target Start/End: Original strand, 19278705 - 19278858
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||| |||||||||||||||| |||| | ||||||||||||||| |||||||| |||||| ||| |||||||||||||||| |||||||||||||   ||    
T  19278705 tttgatccttttagtttgacagaattcttaagttagtcctttaaatttcaaaa-ttttaattagcttcttttagtttgacagaattctcaagttacctct 19278803  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||| |||||| | |||||||||| ||||||||||| |||||  ||||| |||||    
T  19278804 ttaagtttcaataatttcaaataaatcattttagttgataaactatttcactgtt 19278858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 14235554 - 14235688
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| ||| ||||||||||||||||||| | |||||| ||||||||||||||||||  ||||||||||| ||| | |||||||||||||| ||||    
T  14235554 ggccaaatatcatttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaatt 14235653  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaata 219  Q
    ||||||||| ||||||   ||||| ||||||||||||    
T  14235654 ctcaagttagtccttt--gtttcacaagtttcaaata 14235688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 32660266 - 32660379
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 203  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |  ||||||||||||| |||||  |||||| |||||||| ||    
T  32660266 cttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtt 32660365  T
Q  204 tcaaaagtttcaaa 217  Q
    ||||||||||||||    
T  32660366 tcaaaagtttcaaa 32660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 105 - 399
Target Start/End: Original strand, 30737748 - 30738052
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||| ||||||| |||| |||||||| || ||||| |||| ||||||| || ||  |  ||||||||||||||||||||||| ||| || ||||| |||    
T  30737748 ttttaatttgacagaattctcaagttaatcatttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagttt 30737847  T
Q  205 caaaagtttcaaataagtcattttagtttataaatcatttctctgttg---------tgagttaataattaattgatattaatgtagccgttaaattgtt 295  Q
    ||||||||| ||||||||||||| |||| |||||   |||  | |||          | ||||| ||||||| | ||  | |||||| |||||| |||||    
T  30737848 caaaagttttaaataagtcatttaagttgataaactgttttaccgttacccctactatcagttagtaattaacttatgctgatgtagtcgttaagttgtt 30737947  T
Q  296 gacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatgtcgtttaat 394  Q
    ||||||||||||||  |||  |||||||||| ||| |||||||||||||||| || |||  |||||||| |||||| || |||||||||||| |||||||    
T  30737948 gacttggatcaaaatactgttttttaaaagccccaaggtgtcaaaatgttacgtttaatcgtcacaaatgatcattctaacactataaatgttgtttaat 30738047  T
Q  395 agtgc 399  Q
    |||||    
T  30738048 agtgc 30738052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 36417886 - 36417997
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||| |||||||||||| ||| |||| ||||||||||||||||| |||| ||||||| || ||| ||||||| |||||||||||||||||||||| ||||    
T  36417886 tttgatccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagtcct 36417985  T
Q  197 ttaaatttcaaa 208  Q
    |||| |||||||    
T  36417986 ttaagtttcaaa 36417997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 5735102 - 5734964
Alignment:
Q  99 tggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttt 198  Q
    |||||||||||||||||   |||| ||||||||||| ||||| |||| ||| |||||| ||  | |||||||||| ||| ||||||||||||| ||||||    
T  5735102 tggtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagtccttt 5735003  T
Q  199 aaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
     || ||||||||||||||||| |||||||||||| |||||    
T  5735002 -aagttcaaaagtttcaaataggtcattttagttgataaa 5734964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 407
Target Start/End: Original strand, 38405198 - 38405357
Alignment:
Q  250 ttgtgagttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcatttt-aaaagctccagggtgtcaaaatgttaca 348  Q
    |||| ||||||||||||| |||| || |||||| | |||| || ||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||     
T  38405198 ttgtcagttaataattaactgatgttgatgtagtctttaagttattgacttggatcaaaacgctgcattttaaaaagcttcaaggtgtcaaaatattacg 38405297  T
Q  349 ttcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    |  |||| |||||||| |||||   | |||||||||| |||||||||| |||||||||||    
T  38405298 tgtaatggtcacaaatgatcatcccagcactataaatatcgtttaataatgctagaaaga 38405357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 30738377 - 30738248
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 201  Q
    |||||||||||||||| |||||  ||||||||  |||||||||| ||| |||||| ||| |  ||||| ||||||| ||||||||||||  |||||||      
T  30738377 tccttttagtttgacagaatttcgaagttagtattttaagtttcgaaa-ttttaattaggtcattttaatttgacagaattctcaagtttgtcctttatg 30738279  T
Q  202 tttcaaaagtttcaaataagtcattttagtt 232  Q
    |||||||||||||||||| ||||||||||||    
T  30738278 tttcaaaagtttcaaatatgtcattttagtt 30738248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 31814017 - 31813886
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||||| |||||||||||||||||||||| ||||  |||||||||| ||||||||||         ||||||| | ||||||||||||| |||||||    
T  31814017 caaataccacgtttggtccttttagtttgacagaattcccaagttagtcatttaagtttc---------aaatagact-ttttagtttgacagaattctc 31813928  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattt 227  Q
    ||||   || ||| ||||||||||||||||||||||||||||    
T  31813927 aagtatgtcattttaatttcaaaagtttcaaataagtcattt 31813886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 364
Target Start/End: Original strand, 35189922 - 35190180
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||| ||||| | |||| ||||||||||| |||||||||| |||||||||||||| |  ||||||||||||| || || ||||||| |||||||| |||    
T  35189922 ttttaatttgatagaattctcaagttagtc-tttaagtttcgaaagttttaaataggtcattttagtttgacagaactcccaagttagtcctttaagttt 35190020  T
Q  205 caaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaatgtagccgttaaattgtt 295  Q
    |||||         |  ||||||||||| |||||  ||||| |||||         || ||||||||||||| |||| || |||||| |||||| |||||    
T  35190021 caaaa---------agatcattttagttgataaactatttcactgttacccctgttgtcagttaataattaactgatgttgatgtagtcgttaagttgtt 35190111  T
Q  296 gacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||||||||||| | ||| ||| |||||||| |||||||| ||| | ||| || |||| ||||||||    
T  35190112 gacttggatcaaaatgttgcctttcaaaagctctagggtgtccaaacgctacgtttaatggtcacaaat 35190180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 245
Target Start/End: Original strand, 13543070 - 13543235
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||| ||||  ||||||||||||||||||||| ||||   |||||| | ||||||||||| ||||||| || ||| |  |||||||||||   ||||    
T  13543070 ggccaaagaccacttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatt 13543169  T
Q  183 ctcaagttaat---cctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
      ||||||| |   ||||||| |||||||||||||||||| |||||||||||| |||||| |||||    
T  13543170 tccaagttattagtcctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttc 13543235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 32459427 - 32459490
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  32459427 tttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaatag 32459490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 35891325 - 35891263
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  35891325 tttgatccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaata 35891263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 26276077 - 26276012
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  26276077 ggccaaataccacttttgatccttttagtttgacaaaatttccaagttagtcctttaagtttcaaa 26276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 18951368 - 18951452
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    |||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||| |  ||||||||||| | ||||||||    
T  18951368 tccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtttgatagaattctca 18951452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 6336412 - 6336310
Alignment:
Q  136 tttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttat 235  Q
    |||||||||| ||||||| || |||||||||||| |||| || |||||  |||||| |||||||||||||||| |||||||||| ||| ||| |||| ||    
T  6336412 tttaagtttcgaaagtttcaattagattcttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttgat 6336313  T
Q  236 aaa 238  Q
    |||    
T  6336312 aaa 6336310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 35891318 - 35891260
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagt 222  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  35891318 cttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagt 35891260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 18237919 - 18238006
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||||||| |||| | ||||||||||||||| ||| |||||||| ||||||||| |||||||| |||||  ||||| |||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcactgtt 18238006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 18238390 - 18238339
Alignment:
Q  109 agtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaatag 18238339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 32459434 - 32459521
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||||||| ||||| ||||||| || ||||| |||||||||||| ||||| |||||||||||| |||||  ||||| |||||    
T  32459434 cttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgtt 32459521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 18237919 - 18237987
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||  | |||||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagtt 18237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 6336150 - 6336219
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||| || ||||  ||||||| |||||||| |||||||||||| ||||| |||||||||||||    
T  6336150 cttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagttt 6336219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 38082723 - 38082800
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||| |||| || |||| || |||||||| || ||||||||||||||||| ||||||||| ||| |||||||||||||    
T  38082723 ttaactgatgttgatgtggctgttaaattattcacttggatcaaaacgcttcattttaaaggcttcagggtgtcaaaa 38082800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 38405652 - 38405583
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||| ||| ||||| |||||||||| ||||| |||| |||||||||| || |||||||||||||    
T  38405652 cttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagttt 38405583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 13538455 - 13538563
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||| ||||  ||||||||||||||||||||| ||||   |||||||||||||| ||||| ||||||| || ||| |   |||||||||| | ||||    
T  13538455 ggccaaagaccacttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaatt 13538554  T
Q  183 ctcaagtta 191  Q
     ||||||||    
T  13538555 ttcaagtta 13538563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 18238390 - 18238314
Alignment:
Q  169 agtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    ||||||||| ||||  ||||||| || ||||| |||||||||||| ||||| |||||||||||| |||||| |||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttc 18238314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 19278900 - 19278980
Alignment:
Q  284 cgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||| ||||||||||||||||||||| ||  ||||||||| |||||| |||||||| | ||| || ||| |||||||||    
T  19278900 cgttaagttgttgacttggatcaaaacgttgtcttttaaaagttccaggatgtcaaaacgctacgtttaattatcacaaat 19278980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 36417893 - 36417945
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 216  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||    
T  36417893 cttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaa 36417945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 41282526 - 41282474
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    |||||||| |||||||||| ||||| ||||||||||||||| |||||||||||    
T  41282526 tcctttaagtttcaaaagtctcaaacaagtcattttagtttttaaatcatttc 41282474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 364
Target Start/End: Complemental strand, 5734917 - 5734830
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||| ||||||| ||||||||||  ||||||| ||||| |||||||||| | | |||||||||||| ||| || | |||||||||||    
T  5734917 atgtaaccgttaagttgttgacttaaatcaaaatgctgccttttaaaagcccgatggtgtcaaaatgctacgtttattgatcacaaat 5734830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 19279290 - 19279239
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    ||||||||||||||||||||| | ||||||||  ||||||||||||||||||    
T  19279290 tccttttagtttgacaaaattcttaagttagttttttaagtttcaaaagttt 19279239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 1723034 - 1722964
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||||| |||||||||  ||||||||  ||||||||| |||||||||||||| ||  ||||||||    
T  1723034 tccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagtt 1722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 13543289 - 13543339
Alignment:
Q  291 ttgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||||||||||||||| ||| ||||||||| | |||||||||||||    
T  13543289 ttgttgacttggatcaaaacgttgccttttaaaagtttcagggtgtcaaaa 13543339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 20728734 - 20728780
Alignment:
Q  295 tgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||    
T  20728734 tgacttggatcaaaacgctgtcttttaaaagctccagagtgtcaaaa 20728780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 14620780 - 14620829
Alignment:
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    ||||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  14620780 tttaagtttcaaaagtctcaaataagtcattttagtttctaaaacatttc 14620829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 32660322 - 32660375
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    |||| ||||||||||||| ||||   ||||||||||||||||||||||||||||    
T  32660322 ggtcattttagtttgacagaattcctaagttagtcctttaagtttcaaaagttt 32660375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 38405670 - 38405569
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||| |||| |||||||||||| ||| ||||  ||||||| || |||||||||| ||||||| || ||  |  |||||||||| || |||||||    
T  38405670 caaataccatttttgatccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattctc 38405571  T
Q  186 aa 187  Q
    ||    
T  38405570 aa 38405569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 35342364 - 35342324
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  35342364 tcctttaagtttcaaaagtttcaaataagtccttttagttt 35342324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 18320898 - 18321024
Alignment:
Q  281 agccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcacta 379  Q
    ||||||||| ||||||||||||||||||| ||| |  |||||||| |  ||| |||||||| |||| ||| |||  ||| |||| |||||| || ||||     
T  18320898 agccgttaagttgttgacttggatcaaaatgct-ccctttaaaagttttaggatgtcaaaacgttatatttaatcgtcaaaaatgatcattctagcactt 18320996  T
Q  380 taaatgtcgtttaatagtgctagaaaga 407  Q
    ||||||  |||||||| |||||||||||    
T  18320997 taaatgctgtttaataatgctagaaaga 18321024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 23251658 - 23251701
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaa 140  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||    
T  23251658 tttggtcctttaagtttgacaaaaatttcaggttagtcctttaa 23251701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 277 - 364
Target Start/End: Complemental strand, 26275943 - 26275856
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||| || ||||||  ||||||||||||||| ||||| |||||||||||| |  ||||||||| | ||| || |||| ||||||||    
T  26275943 atgtagtcgataaattactgacttggatcaaaatgctgccttttaaaagctctatagtgtcaaaacggtacgtttaatggtcacaaat 26275856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 30738320 - 30738261
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||| ||||| ||||||| |||| ||||||| |||||||| ||||||||||||| |||||    
T  30738320 ggtcattttaatttgacagaattctcaagtttgtcctttatgtttcaaaagtttcaaata 30738261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 32459552 - 32459611
Alignment:
Q  282 gccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||||||| ||| || ||| |||||||||||| ||||||||| ||||||| |||||||||    
T  32459552 gccgttaagttgctgccttagatcaaaacgctacattttaaaggctccagtgtgtcaaaa 32459611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 34444914 - 34444989
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||| |||||||||||| | ||   ||||||||||||||||   || ||||||||||||||||| ||||    
T  34444914 tttggtcctttaagtttgacaaaaatatcggattagtcctttaagttttttaaattttaaatagattctttaagtt 34444989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 13538476 - 13538545
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||||  |||||| |||||||  |||| |||||||||| || |||  ||||||||    
T  13538476 cttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagttt 13538545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 19279288 - 19279235
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaa 217  Q
    |||||||||||||| |||||| |||||| |  ||||| ||||||||||||||||    
T  19279288 cttttagtttgacaaaattcttaagttagttttttaagtttcaaaagtttcaaa 19279235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 20728536 - 20728605
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttta 234  Q
    ||||||||||||| ||||  ||||||| |||||||| |||| |||| ||||| || ||| ||||||||||    
T  20728536 ttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagttta 20728605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 35189976 - 35190025
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 149  Q
    |||| ||||||||||||| || |  |||||||||||||||||||||||||    
T  35189976 ggtcattttagtttgacagaactcccaagttagtcctttaagtttcaaaa 35190025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 38405489 - 38405436
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctcca 330  Q
    ||||| ||||||| ||||| ||||||||||||| | || |||||||||||||||    
T  38405489 atgtaaccgttaagttgttaacttggatcaaaatgttgtattttaaaagctcca 38405436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 8695050 - 8695010
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||| ||||| ||||| |||||||||    
T  8695050 tcctttaaatttcaaaagtctcaaacaagtccttttagttt 8695010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 9919239 - 9919279
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  9919239 tcctttaagtttcaaaagtctcaaataagtccttttagttt 9919279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 18321287 - 18321223
Alignment:
Q  147 aaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagt 211  Q
    ||||||| || ||| |||||||| ||||||| |||| | |||||| |||||||||||| ||||||    
T  18321287 aaagtttcaattaggttcttttaatttgacagaatttttaagttagtcctttaaattttaaaagt 18321223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 19659458 - 19659498
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  19659458 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 19659498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 20079215 - 20079255
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  20079215 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 20079255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 31710179 - 31710219
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  31710179 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 31710219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 4e-88; HSPs: 111)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 83 - 406
Target Start/End: Original strand, 27995047 - 27995379
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| || |||||||||||||||||||||| |||| ||||||||||  |||||||||||||| ||| ||||||||  ||||| ||||||| ||||    
T  27995047 ggccaaatatcacgtttggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaatt 27995146  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgata 273  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||||| |||||  ||||| |||||         || ||||||||||||||||||     
T  27995147 ctcaagttaatcctttaagtttcaaaagtatcaaataagtaattttagttgataaactatttcactgttacccctgctgtcagttaataattaattgatg 27995246  T
Q  274 ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcatttta 373  Q
    || |||| |||||||| |||||||||| |||||||| ||| | | ||||||||| ||||||||||||||||||| || |||| |||||||||||||||||    
T  27995247 ttgatgttgccgttaagttgttgactttgatcaaaatgcttcctattaaaagcttcagggtgtcaaaatgttacgtttaatggtcacaaatatcatttta 27995346  T
Q  374 tcactataaatgtcgtttaatagtgctagaaag 406  Q
     ||||||||||||||||||||||||||||||||    
T  27995347 gcactataaatgtcgtttaatagtgctagaaag 27995379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 85 - 407
Target Start/End: Complemental strand, 39959330 - 39958999
Alignment:
Q  85 ccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattct 184  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||| ||||| ||| |||||||| ||||||||||||||||||||||| ||||      
T  39959330 ccaaataccacgtttggtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttc 39959231  T
Q  185 caagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatatt 275  Q
    |||||||||| ||||| |||||||||||||||||| ||  ||||| || |||||  ||||         | ||| ||| ||||||||||||||||||  |    
T  39959230 caagttaatcatttaagtttcaaaagtttcaaataggttcttttacttgataaactatttcaccgttaacgctgatgtcagttaataattaattgatgct 39959131  T
Q  276 aatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatc 375  Q
     ||| ||||||||| ||||||||||||||||||||||||| || || ||| | |||| |||||||| ||||| || |||| |||||||||||||| || |    
T  39959130 gatgcagccgttaagttgttgacttggatcaaaacgctgccttgtagaagtttcaggatgtcaaaacgttacgtttaatggtcacaaatatcattgtagc 39959031  T
Q  376 actataaatgtcgtttaatagtgctagaaaga 407  Q
    ||||||||||| ||||||||||||||||||||    
T  39959030 actataaatgttgtttaatagtgctagaaaga 39958999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 86 - 385
Target Start/End: Original strand, 28256482 - 28256791
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| ||| |||| |||||||||||||||| ||||  ||||||| | |||||| |||||||||||||||| |||| |||||||||||||| |||||||    
T  28256482 caaatatcatatttgatccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctc 28256581  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt----------ctctgttgtgagttaataattaattgatatt 275  Q
    |||||| ||||||||||||||||||||||||||| ||  |||||||| |||||  ||||          | |||||||  ||||||||||| ||||| ||    
T  28256582 aagttagtcctttaaatttcaaaagtttcaaataggttcttttagttgataaactatttcactgttaccccctgttgtctgttaataattatttgatgtt 28256681  T
Q  276 aatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatc 375  Q
     ||||||| ||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||| || |||| ||||||||||||||||| |    
T  28256682 gatgtagcagttaagttgttgacttggatcaaaacgctgccttttaaaaactctagggtgtcaaaacgttacgtttaatggtcacaaatatcattttagc 28256781  T
Q  376 actataaatg 385  Q
    ||||||||||    
T  28256782 actataaatg 28256791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 83 - 405
Target Start/End: Original strand, 5559093 - 5559426
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataat 181  Q
    |||||||||||| |||||||||||||| ||||||| ||||  |||||||||||||| ||||||||||||||| |||||||| |||||||||||| | |||    
T  5559093 ggccaaataccacgtttggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaat 5559192  T
Q  182 tctcaagttaatcc-tttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattga 271  Q
    || ||||||| ||| ||||| |||||||||||||||||| ||| |||||||| |||||  ||||| | |||         || |||||||||||||||||    
T  5559193 tcccaagttagtccttttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgcagtcagttaataattaattga 5559292  T
Q  272 tattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattt 371  Q
    | || |||||| | |||| |||||||||||||||||||||| || |||||||| |||||||||||||||| |||||  | |||| ||||||||||||||     
T  5559293 tgttgatgtagtcattaagttgttgacttggatcaaaacgccgccttttaaaatctccagggtgtcaaaacgttacggttaatggtcacaaatatcattc 5559392  T
Q  372 tatcactataaatgtcgtttaatagtgctagaaa 405  Q
    || || ||||||||| ||||||| ||||||||||    
T  5559393 tagcattataaatgttgtttaattgtgctagaaa 5559426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 83 - 407
Target Start/End: Complemental strand, 33235690 - 33235356
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||  ||||||| || ||||||||| ||| ||||   || ||| | ||||| ||||  |||||||||| | | | |||||||||||||| ||||    
T  33235690 ggccaaatattatgtttgatcattttagtttcacagaattcctaaattatttctttacgttttgaaagttttaatttggtccttttagtttgacaaaatt 33235591  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgata 273  Q
     |||||||| |||||||| ||||||||  |||||||| |||||||||||| |||||  ||||| |||||         || |||||||||||||||||||    
T  33235590 atcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgataaactatttcactgttacccttgttgtcagttaataattaattgata 33235491  T
Q  274 ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcatttt 372  Q
     | |||||||||| || ||||||||||||||||||| |  |||||||||||||| ||||||| ||||||||||| || |||| |||||||| |||||| |    
T  33235490 ctgatgtagccgtcaagttgttgacttggatcaaaatgtcgcattttaaaagcttcagggtgccaaaatgttacgtttaatggtcacaaatgatcattct 33235391  T
Q  373 atcactataaatgtcgtttaatagtgctagaaaga 407  Q
    | ||||||||||||| |||||||||||||||||||    
T  33235390 agcactataaatgtcatttaatagtgctagaaaga 33235356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 92 - 407
Target Start/End: Original strand, 42990495 - 42990820
Alignment:
Q  92 ccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagtta 191  Q
    |||||||| || ||||||||| || | |||||| || ||||||||||||||||  |||||||||| ||| |  |||||||| |||| |||| ||||||||    
T  42990495 ccatgtttagtgcttttagttggaaagaatttttaaattagtcctttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagtta 42990594  T
Q  192 atcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgatattaatgtag 282  Q
    ||  ||||| ||| |||||||| || || |||||||||||| ||| |  ||||  |         |||||| ||||||||||||||||||  ||||||||    
T  42990595 attttttaagttttaaaagttttaattatgtcattttagttgatacactattttaccgttacccatgttgtcagttaataattaattgatgctaatgtag 42990694  T
Q  283 ccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactata 381  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||| || |||  ||||| || |||||| || || ||||    
T  42990695 ccgttaagttgttgacttggatcaaaacgctgccttttaaaagttatagggtgtcaaaatgttacgtttaatcgtcacagatgatcattatagcattata 42990794  T
Q  382 aatgtcgtttaatagtgctagaaaga 407  Q
    ||||||||||||||||||||||||||    
T  42990795 aatgtcgtttaatagtgctagaaaga 42990820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 87 - 407
Target Start/End: Complemental strand, 35215458 - 35215128
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| || ||  |  ||||| ||||||| ||||  ||    
T  35215458 aaatatcacgtttgatccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttcca 35215359  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaa 277  Q
    | ||| || ||||| ||| ||||||||||||||| ||||||||||| |||||  |||||  ||||         || ||||||||||||| | || || |    
T  35215358 aattagtcttttaagttttaaaagtttcaaataactcattttagttgataaactatttcattgttacccttgttgttagttaataattaactcatgttga 35215259  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatca 376  Q
    |||||||||||| ||||| || ||||||||| || ||| ||||||||||| || |||||||||||||||| || |||  |||||||| || ||| || ||    
T  35215258 tgtagccgttaagttgttaacatggatcaaagcgttgccttttaaaagcttcaaggtgtcaaaatgttacgtttaatcgtcacaaatgataattctaaca 35215159  T
Q  377 ctataaatgtcgtttaatagtgctagaaaga 407  Q
    ||| || |||| |||||||||||||||||||    
T  35215158 ctacaagtgtcatttaatagtgctagaaaga 35215128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 104 - 407
Target Start/End: Complemental strand, 1349269 - 1348963
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaa---tcctttaa 200  Q
    |||||||||||||| |||||  ||||||||| |||||||||||||||||||||||| ||  ||||||||||||| ||||  ||| |||    ||||||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaa 1349170  T
Q  201 atttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaatgtagccgttaaat 291  Q
     |||||||||||||||||| |||||||||||| ||||| |||||| | |||         || ||||||||||||  | || || |||||| |||||| |    
T  1349169 gtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttaccccaattgtcagttaataattatattatgttgatgtagtcgttaagt 1349070  T
Q  292 tgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaatgtcgttt 391  Q
    ||||||||| |||||||||||||| ||||||||| | ||| ||||||||| ||||| || |||||||||         | || || ||||||||||||||    
T  1349069 tgttgactttgatcaaaacgctgccttttaaaagtttcagagtgtcaaaacgttacgtttaatgatcac---------tctagcaatataaatgtcgttt 1348979  T
Q  392 aatagtgctagaaaga 407  Q
    ||||||||||||||||    
T  1348978 aatagtgctagaaaga 1348963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 255 - 395
Target Start/End: Original strand, 1441124 - 1441264
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    |||||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||||||||||| ||   |||||||||| ||||  || |||    
T  1441124 agttaataattaattgatgttgatgtagtcgttaaattgttaacttggatcaaaacgctgcattttaaaagttctgcggtgtcaaaacgttatgtttaat 1441223  T
Q  355 gatcacaaatatcattttatcactataaatgtcgtttaata 395  Q
    | ||||||||||||||||| |||||||||||||||||||||    
T  1441224 ggtcacaaatatcattttagcactataaatgtcgtttaata 1441264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 84 - 239
Target Start/End: Complemental strand, 20366675 - 20366520
Alignment:
Q  84 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 183  Q
    |||||||||||  ||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||  || |||| |||||||||||||| |||||    
T  20366675 gccaaataccacatttggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattc 20366576  T
Q  184 tcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaat 239  Q
     ||||||| |||||||  |||||||||||||||||| ||| |||||||| ||||||    
T  20366575 gcaagttagtcctttaggtttcaaaagtttcaaatatgtccttttagttgataaat 20366520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 33879651 - 33879505
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||| || ||| | |||||| ||||||| ||||  |    
T  33879651 caaataccatttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttcc 33879552  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtt 232  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  33879551 aagttaatcctttaagtttcaaaagtttcaaataggtccttttagtt 33879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 21412931 - 21413047
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 201  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||||| || |||||     
T  21412931 tccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtttcacagaattctcaagttagtcttttaag 21413030  T
Q  202 tttcaaaagtttcaaat 218  Q
    |||||||||||| ||||    
T  21413031 tttcaaaagttttaaat 21413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 19925472 - 19925321
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||  |||||| |||||||||||||||||||  ||| ||||||||||||||| | |||||||||| ||||| |||||||||||||| ||||| ||    
T  19925472 aaataccacttttggttcttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattccca 19925373  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||| |||||||| |||||||||||||||||| ||| ||| |||| |||||    
T  19925372 agttagtcctttaagtttcaaaagtttcaaataggtcctttcagttgataaa 19925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 407
Target Start/End: Complemental strand, 8040271 - 8039966
Alignment:
Q  96 gtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 195  Q
    |||||||||||||||||| ||  ||||| ||| |||||| |||||||||||||| ||| |||||||| ||||||| |||||| ||| | ||||||| |||    
T  8040271 gtttggtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaatcc-caagttagtcc 8040173  T
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaatgtagccgt 286  Q
    |||||         |||||||||| ||| |||||||| || ||  ||||| | |||         || ||||||||||||||||||  ||     |||||    
T  8040172 tttaa---------gtttcaaataggtccttttagttgatgaactatttcaccgttacccctgctgtcagttaataattaattgatgcta-----gccgt 8040087  T
Q  287 taaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaatgt 386  Q
    ||| |||||||||| ||| |||||||||| |||||||||||||||| |||||||||||||  || |||| ||| ||||||||||||| |||||||||| |    
T  8040086 taagttgttgactttgattaaaacgctgccttttaaaagctccaggatgtcaaaatgttatgtttaatggtcataaatatcattttagcactataaatat 8039987  T
Q  387 cgtttaatagtgctagaaaga 407  Q
    ||||||||| ||||| |||||    
T  8039986 cgtttaataatgctataaaga 8039966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 87 - 341
Target Start/End: Original strand, 5805028 - 5805291
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||  || |||||||||||||||||| |||| |||||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||||||    
T  5805028 aaataccactttcggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctca 5805127  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgttgtg---------agttaataattaattgatattaa 277  Q
    || || |||||||| |||||||||||| || || ||| |||||||| |||||  |||||  |||| |          |||    | |||||||||  | |    
T  5805128 agctattcctttaagtttcaaaagttttaactaggtccttttagttgataaactatttcgttgttttccctcctatcagtctccatttaattgatgctga 5805227  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||| ||| |||| ||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  5805228 tgtggcctttaagttgttgacttggatcaaaatgctgcattttaaaagttcgagggtgtcaaaa 5805291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 5805731 - 5805583
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||| |  |||||||||||||||||||||||||||| ||||||||| |||||||||  ||||||| || ||  | |||||||||||||  ||||    
T  5805731 ggccaaatactacctttggtccttttagtttgacaaaatttt-aagttagtcatttaagttttgaaagtttcaattatgtccttttagtttgactgaatt 5805633  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtt 232  Q
     ||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  5805632 ttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagtt 5805583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 238
Target Start/End: Original strand, 23150625 - 23150780
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| |||  ||||||| || ||  |  ||||| ||||||| ||||    
T  23150625 ggccaaatactatgtttggtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaatt 23150724  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||  ||| || ||||| ||||||||||||||||||| ||||||||||| |||||    
T  23150725 ctcagattagtcttttaagtttcaaaagtttcaaataaatcattttagttgataaa 23150780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 342
Target Start/End: Original strand, 35214806 - 35215060
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 195  Q
    |||| |||||||||||||||| |||||  |||||||| |||| ||||||||||||||| || ||| | |||||||||||||| ||||||||||||| ||     
T  35214806 tttgatccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtct 35214905  T
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatattaatgtagccgt 286  Q
    ||||| |||||||| ||||||||| ||| |||||||| |||||  ||||         | ||||||| |||      |||| |||| || ||||||||||    
T  35214906 tttaagtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttacccctgttgtcagtctccgtttaactgatgttgatgtagccgt 35215005  T
Q  287 taaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaat 342  Q
    | | ||||||||||||||||||| ||||| |||||||||||| |||||||||||||    
T  35215006 ttagttgttgacttggatcaaaatgctgc-ttttaaaagctcgagggtgtcaaaat 35215060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 21412856 - 21413002
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| ||| ||| ||||||||||||||||| |||| | |||||| ||||||||||||  ||||||| || ||||| |||||||||||||| |||| |||    
T  21412856 aaatatcatttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttca 21412955  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| |||||||| |||||||||||| |||||  ||||||||||||    
T  21412956 agttagtcctttaagtttcaaaagttttaaatagatcattttagttt 21413002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 31893611 - 31893489
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| ||| ||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||| || ||| | |||||||||||||| |||||||    
T  31893611 caaatatcatttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaattctc 31893512  T
Q  186 aagttaatcctttaaatttcaaa 208  Q
    |||||| |||||||| |||||||    
T  31893511 aagttagtcctttaagtttcaaa 31893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 36566267 - 36566414
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||||| |||||||||||||||||||||| |||| | ||||||||| |||||||||  ||||||| || ||| |  ||||||||||||| |||||||    
T  36566267 caaataccacgtttggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctc 36566366  T
Q  186 -aagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
     |||||| | |||||| |||||||| |||||||||||||||||||||||    
T  36566367 aaagttagt-ctttaagtttcaaaattttcaaataagtcattttagttt 36566414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 238
Target Start/End: Original strand, 20366035 - 20366188
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| ||| ||||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||| || ||  | |||||||||||||| ||||    
T  20366035 ggccaaatatcatttttggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaatt 20366133  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||| ||| ||||| ||| ||||||| ||||||||||| ||| |||||||| |||||    
T  20366134 ctc-agtcaatcccttatatttcaagagtttcaaataggtctttttagttgataaa 20366188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 34951218 - 34951368
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||  |||| || |||||||||||||| |||  |||  ||||| |||||||||| ||||||| || ||| | ||||| ||||||||||||||| |    
T  34951218 aaataccacttttgatctttttagtttgacaatattcccaacatagtc-tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattctta 34951316  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  34951317 agttagtcctttaagtttcaaaagtttcaaataagtcattttagttgataaa 34951368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 5559755 - 5559631
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| || ||| | |||||||||||||| ||||    
T  5559755 ggccaaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagttt-taaagtttcaattaggtccttttagtttgacagaatt 5559657  T
Q  183 ctcaagttaatcctttaaatttcaaa 208  Q
    | ||||||| |||||||| |||||||    
T  5559656 cccaagttagtcctttaagtttcaaa 5559631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 29591171 - 29591047
Alignment:
Q  107 ttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagt--taatcctttaaattt 204  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||||| ||| |  ||||||||||||| ||| | |||||  ||||||||||| |||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtttgacaaaatccgcaagttataatcctttaagttt 29591072  T
Q  205 caaaagtttcaaataagtcatttta 229  Q
    ||||||||| |||||||||||||||    
T  29591071 caaaagttttaaataagtcatttta 29591047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 33235042 - 33235175
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||||||||||| |||| |||||||| |||||||| ||| |||||||| || ||| | ||||| |||||||| ||||| |||||||  |||||||||||    
T  33235042 ttttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttagacctttaaattt 33235141  T
Q  205 caaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||||||| | |||||||||||| |||||    
T  33235142 caaaagtttcaaagaggtcattttagttgataaa 33235175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 341
Target Start/End: Original strand, 1286374 - 1286621
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 200  Q
    ||||||||||||||| | ||||||||| |||||  ||||| |||||||||||| || ||| | |||||||||||| | |||||| |||||| || |||||    
T  1286374 gtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 1286473  T
Q  201 atttcaaaagtttcaaataagtcattttagtttataaatcat-----tt--ctctgttgtgagttaataattaattgatattaatgtagccgttaaattg 293  Q
     |||||||||||||||||| ||  |||||||| |||||| ||     ||  | ||| ||| |||      |||| |||| || ||||||||||||| |||    
T  1286474 gtttcaaaagtttcaaataggttcttttagttgataaattatcaccgttacccctgctgtcagtctccgtttaactgatgttgatgtagccgttaagttg 1286573  T
Q  294 ttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||||||||||| |||| || | |||||||||||||||||||||||||    
T  1286574 ttgacttggatccaaacactactttttaaaagctccagggtgtcaaaa 1286621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 5075450 - 5075542
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttac 347  Q
    ||||||||||||| ||||  | ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  5075450 agttaataattaactgatgctgatgtagccgttaagttgttgacttggatcaaaacgctgcattttaaaagctcgagggtgtcaaaacgttac 5075542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 21433144 - 21433280
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||| || |||| || ||  | |||||||||||| | ||||| ||||||| || |    
T  21433144 tttgatccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagtcat 21433243  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||| |||||||||||||||||||||  |||||||||    
T  21433244 ttaagtttcaaaagtttcaaataagttcttttagttt 21433280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 1346480 - 1346599
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||| |||||||||||||||| |||| | |||||||| ||||||||||| ||||||| || || || |||||||||||||||||||  ||||||| ||||    
T  1346480 tttgatccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcct 1346579  T
Q  197 ttaaatttcaaaagtttcaa 216  Q
    |||| |||||||||||||||    
T  1346580 ttaagtttcaaaagtttcaa 1346599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 40904691 - 40904813
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||||||| |||||||| || ||| | ||||||||||||||||||| |||| ||| || |    
T  40904691 tttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcat 40904790  T
Q  197 ttaaatttcaaaagtttcaaata 219  Q
    |||| ||| ||||||||||||||    
T  40904791 ttaagttttaaaagtttcaaata 40904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 83 - 346
Target Start/End: Complemental strand, 23679659 - 23679397
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||||| |||||||| ||||||||||| ||||||  ||| ||||||         ||| |||||| || ||| |||||||||||||||| ||||    
T  23679659 ggccaaataccacgtttggtctttttagtttgataaaattcacaaattagtc---------tcataagtttcaattaggttcttttagtttgacagaatt 23679569  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgata 273  Q
    ||||||||| | |||||| |||||||||||| |||||  | ||||||||| |||||  ||||| |         || ||| ||||||||||||||||||     
T  23679568 ctcaagttagt-ctttaagtttcaaaagtttaaaatagattattttagttgataaactatttcaccgttacccttgctgtcagttaataattaattgatg 23679470  T
Q  274 ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgtta 346  Q
     | ||||||||||||| ||||| ||||||||||||||  |    ||||||||||||||||| |||||||||||    
T  23679469 ctgatgtagccgttaagttgttaacttggatcaaaacattatcgtttaaaagctccagggtctcaaaatgtta 23679397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 19925091 - 19925241
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||| || ||||||| ||||||||||||| ||||| ||||||| ||||| ||||||| ||||||| || ||||| |||||||||||||| ||||    
T  19925091 ggccaaatactatttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgacacaatt 19925190  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttta 234  Q
     || | ||| |||||||| |||||||| | ||||||| | | ||||||||||    
T  19925191 -tccaattagtcctttaagtttcaaaaatatcaaataggaccttttagttta 19925241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 34951597 - 34951450
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||| || ||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||| || ||||| |||||||||||||| ||||       
T  34951597 caaatactatttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatttct 34951498  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    || | | |||||||| |||||||||| | ||||| | | |||||||||    
T  34951497 aaatcagtcctttaagtttcaaaagtataaaatatgaccttttagttt 34951450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 36566341 - 36566458
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaa-gttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttt 198  Q
    |||| ||||||||||||| |||| |||| ||||||| |||||||||||||| ||| |||||  |  ||||||||||||| ||||||||||||| ||||||    
T  36566341 ggtcattttagtttgacagaattctcaaagttagtc-tttaagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtccttt 36566439  T
Q  199 aaatttcaaaagtttcaaa 217  Q
    |||||||||||||||||||    
T  36566440 aaatttcaaaagtttcaaa 36566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 33879577 - 33879480
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 197  Q
    |||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||| |||||| | ||||||||| |||||||||| ||||||| |||||    
T  33879577 ggtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagttcgacataattcccaagttagtcctt 33879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 40904754 - 40904841
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa 187  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| |||||||| |||||||| |||||| ||||||| |||||||||    
T  40904754 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattctcaa 40904841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 41020258 - 41020137
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||| |||| |||||||||||||||| ||||| |||||||||  |||||||||  |||||||||| ||||| |||||||||||||| ||||       
T  41020258 caaataccatttttgatccttttagtttgacataatttccaagttagtt-tttaagttttgaaagttttaattagatccttttagtttgacagaatttct 41020160  T
Q  186 aagttaatcctttaaatttcaaa 208  Q
    |||||||| |||||| |||||||    
T  41020159 aagttaattctttaagtttcaaa 41020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 311
Target Start/End: Complemental strand, 1286936 - 1286706
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    |||||| | |||||||||||||||||| | | |||||| |||| |||| ||||| |||||||||||||||||||| || | || ||||| | |||| |||    
T  1286936 aaatacaaagtttggtccttttagtttcatagaatttttaagtcagtcatttaa-tttcaaaagttttaaataga-tcctataatttgatagaattttca 1286839  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaa 277  Q
    | ||| |||||||| ||| |||||||| ||||| ||| |||||||| |||||| ||||| | |||         || ||||||||||||||||||| | |    
T  1286838 aattagtcctttaagttttaaaagttttaaatatgtc-ttttagttgataaattatttcaccgttacccctgccgttagttaataattaattgatactga 1286740  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacg 311  Q
    |||||| ||||  || ||||||||||||||||||    
T  1286739 tgtagctgttacgttcttgacttggatcaaaacg 1286706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 27995654 - 27995569
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||| ||| ||||||| ||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  27995654 aaatatcatttttggtctttttagtatgacatattttttaagttagtcctttaagtttcaaaagttttaaatagatccttttagtt 27995569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 31893236 - 31893361
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||| |||||| |||||||||||||| |||| ||||||||||  |||||||||| ||||||| || ||| |  ||||||||||||| ||||    
T  31893236 ggccaaataccatttttggttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 31893335  T
Q  183 ctcaagttaatcctttaaatttcaaa 208  Q
    |  |||||| || ||||| |||||||    
T  31893336 cctaagttagtcttttaagtttcaaa 31893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 4187763 - 4187673
Alignment:
Q  148 aagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||| ||||| |||||| ||||||| |||| |||||||| |||||||||||| |||||||| ||||| |||||||||||| |||||    
T  4187763 aagttttaattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaa 4187673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 5805511 - 5805360
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    |||||||||||||  |||  | |||||||| |||| ||||||||||||||||||||||||  ||||||||| || ||||||||||||  |||| |  |||    
T  5805511 agttaataattaaccgatgctgatgtagcctttaagttgttgacttggatcaaaacgctgtcttttaaaagttctagggtgtcaaaactttacgtgtaat 5805412  T
Q  355 gatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
      |||||||| |||||| || |||||||||  || |||||||||||||||||||    
T  5805411 cgtcacaaatgatcattctaacactataaa--tcatttaatagtgctagaaaga 5805360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 341
Target Start/End: Original strand, 10619851 - 10620052
Alignment:
Q  148 aagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc 247  Q
    |||||| || ||| |||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||| ||| |||||||| |||||  ||||| |    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 10619950  T
Q  248 tgttgtg---------agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtca 338  Q
     ||| |          |||||||||||||  |||  | ||||| | ||||| ||||||||||||||||||| | ||| |||||||| ||||||| |||||    
T  10619951 cgttatccctgctgccagttaataattaacagatgctgatgtatctgttaagttgttgacttggatcaaaatgttgc-ttttaaaaactccaggctgtca 10620049  T
Q  339 aaa 341  Q
    |||    
T  10620050 aaa 10620052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 22876992 - 22876867
Alignment:
Q  82 gggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataat 181  Q
    |||| ||||||||  |||| |||||||||||||||| ||||| ||||||| |  |||||||||| ||||||| || ||  |  ||||||||||||| |||    
T  22876992 gggctaaataccacttttgatccttttagtttgacataatttccaagttaatt-tttaagtttcgaaagtttcaattaagtcattttagtttgacagaat 22876894  T
Q  182 tctcaagttaatcctttaaatttcaaa 208  Q
    ||||||||||||||||||| |||||||    
T  22876893 tctcaagttaatcctttaagtttcaaa 22876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 10619867 - 10619935
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||| |||||| | |||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 10619935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 407
Target Start/End: Complemental strand, 20184195 - 20184087
Alignment:
Q  300 tggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagtg 398  Q
    |||||||||||||||  ||||||||||| || |||||||||| |||||||| |||| || ||||| |||||| || ||| ||||||||| ||||||| ||    
T  20184195 tggatcaaaacgctgtcttttaaaagcttcaaggtgtcaaaacgttacatttaatggtcgcaaatgatcattctagcacaataaatgtcttttaataatg 20184096  T
Q  399 ctagaaaga 407  Q
    |||||||||    
T  20184095 ctagaaaga 20184087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 21433391 - 21433323
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgttt 21433323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 31176018 - 31175946
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| || | |||||||||    
T  31176018 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagtt 31175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 364
Target Start/End: Original strand, 1348830 - 1348917
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||| ||||||||| |||||||||||||||| | ||| |||||||||||||||||||||| || ||||| || |||| ||||||||    
T  1348830 atgtagtcgttaaattattgacttggatcaaaatgttgccttttaaaagctccagggtgtcataacgttacgtttaatggtcacaaat 1348917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 1441557 - 1441446
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| ||||  ||||||||||||||| ||||| ||||||| || ||| |  ||||||||||| | ||||| ||||||| || |    
T  1441557 tttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaattcccaagttagtctt 1441458  T
Q  197 ttaaatttcaaa 208  Q
    |||| |||||||    
T  1441457 ttaagtttcaaa 1441446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 251
Target Start/End: Original strand, 20183769 - 20183923
Alignment:
Q  97 tttggtcctttt-agtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 195  Q
    |||||||||||| ||||||||| ||||| ||| | ||| |||||| |||  ||||||| || ||||| |||| | ||| | | | ||| ||||||| |||    
T  20183769 tttggtcctttttagtttgacagaatttacaattcagttctttaaattttgaaagtttcaattagatcctttaa-tttaatagagttcccaagttagtcc 20183867  T
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    ||||| |||||||| |||||||||||||||||||||| |||||| ||||| |||||    
T  20183868 tttaagtttcaaaaatttcaaataagtcattttagttgataaattatttcactgtt 20183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 20101887 - 20101956
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||| |||| | |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20101887 tccttttagttcgacaga-ttttcaagttagtcctttaagttttaaaagttttaaatagattctcttagtt 20101956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 34951521 - 34951415
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 201  Q
    |||||||||||||||| |||||  || | ||||||||||||||||||||| | |||||    |||||||||||||| ||||||||||||| || |||||     
T  34951521 tccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtttgacacaattctcaagttagtcatttaag 34951422  T
Q  202 tttcaaa 208  Q
    |||||||    
T  34951421 tttcaaa 34951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 8039652 - 8039741
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttga 175  Q
    |||||||||  ||| ||||||||||||||||| |||| |||||||||| ||||||||||| ||||||| || ||| | ||||||||||||    
T  8039652 caaataccactttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttga 8039741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 21433391 - 21433278
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaat-cctttaaatt 203  Q
    ||||||||||||| ||||  ||||||| ||||||||||||||||||||| |||||  || |||| |||||||| ||||| ||||||| | | ||||| ||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtacttttaagtt 21433292  T
Q  204 tcaaaagtttcaaa 217  Q
    |||||| |||||||    
T  21433291 tcaaaaatttcaaa 21433278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 31893537 - 31893437
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||         ||  | |||||||||||||| ||||||||||||| |||||||    
T  31893537 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaa---------taagtccttttagtttgacaaaattctcaagttagtccttta 31893447  T
Q  200 aatttcaaaa 209  Q
    | ||||||||    
T  31893446 agtttcaaaa 31893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 39958677 - 39958798
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| ||| ||||||||||||||||||||| |||||| ||||||||| ||||||| || ||||||| || ||  |  ||||||||||||| ||||| ||    
T  39958677 aaatatcatttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaattccca 39958776  T
Q  187 agttaatcctttaaatttcaaa 208  Q
       ||||||||||| |||||||    
T  39958777 ttctaatcctttaagtttcaaa 39958798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 1286433 - 1286505
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||||||||| | |||| | ||||||||| |||||||||||||||||| |||||| |||||||||||    
T  1286433 ggtccttttagtttgagagaattctaaagttagtcttttaagtttcaaaagtttcaaataggttcttttagtt 1286505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 365
Target Start/End: Complemental strand, 5559563 - 5559475
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaata 365  Q
    |||||| |||||| ||||||| || |||||||| ||||| ||||||||||||||||||||||||| | ||| || |||| |||||||||    
T  5559563 atgtagtcgttaagttgttgagtttgatcaaaatgctgccttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaata 5559475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 4187515 - 4187626
Alignment:
Q  106 tttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttc 205  Q
    |||||||||||| ||||   || ||| ||||||||||||  ||||||| || ||| | ||||| |||||||||||||| ||||||| | |||||| ||||    
T  4187515 tttagtttgacagaattcataaattaatcctttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagttctttaagtttc 4187614  T
Q  206 aaaagtttcaaa 217  Q
    ||||||||||||    
T  4187615 aaaagtttcaaa 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 31176052 - 31175941
Alignment:
Q  126 aagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcat 225  Q
    |||||| |||||||| |||  ||||||| || ||| | |||||||||||||| ||||  ||||||| |||||||| |||||||||||||||| | ||| |    
T  31176052 aagttaatcctttaatttttgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtcct 31175953  T
Q  226 tttagtttataa 237  Q
    ||||||| ||||    
T  31175952 tttagttgataa 31175941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 42990955 - 42990880
Alignment:
Q  275 taatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacatt 350  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||| ||| ||||||| |||| | ||||||    
T  42990955 taatgtagccgttaagttgttgacttggatcaaaatgctgaattttaaaaactcaagggtgttaaaacgctacatt 42990880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 4187749 - 4187691
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    |||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  4187749 tccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaatag 4187691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 21433208 - 21433282
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttga 175  Q
    ||||||||||||||| | ||||  |||||||||| |||||||||||||||||| |||||  ||||||||||||||    
T  21433208 gtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtttga 21433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 1441550 - 1441481
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||||| ||||||| |||||||  |||| |||||||||| || |||||||||||||    
T  1441550 cttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagttt 1441481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 8039670 - 8039739
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||||||||||||| | |||||| |||| |||||||||| || ||| |||||||||    
T  8039670 cttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagttt 8039739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 8039835 - 8039900
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctc-cagggtgtcaaaa 341  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||||||| |||||||||||||    
T  8039835 atgtagccgttaagttgttgactttgatcaaaatgctgccttttaaaagctcgcagggtgtcaaaa 8039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 20101813 - 20101943
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||| |||| || ||||||||||||  ||||  |||||||||  |||||||||| ||||||| || ||||| ||||||||| ||||  ||| |||    
T  20101813 aaataccatttttgatcattttagtttgactgaattcccaagttagt-ttttaagtttcgaaagtttcaattagatccttttagttcgaca-gattttca 20101910  T
Q  187 agttaatcctttaaatttcaaaagtttcaaata 219  Q
    ||||| |||||||| ||| |||||||| |||||    
T  20101911 agttagtcctttaagttttaaaagttttaaata 20101943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 28256998 - 28256954
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagttt 144  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  28256998 ggtcattttagtttgacaaaattttcaagttagtcctttaagttt 28256954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 28104304 - 28104391
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    ||||||||||| |||||||| |||| || || ||||| |||||||||||| ||||| ||| |||||||| |||||| ||||| |||||    
T  28104304 cttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattatttcactgtt 28104391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 31893255 - 31893326
Alignment:
Q  162 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||| ||||||||||||| |  ||||| |||| |||||||||| || |||||||||||||    
T  31893255 ttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagttt 31893326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 1349270 - 1349200
Alignment:
Q  163 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||||   |||||| || ||||| |||||||||||| |||||| ||||||||||||    
T  1349270 tcttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagttt 1349200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 1440992 - 1441062
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    ||||||||||||  |||| |||||||||||||||| ||||  |||||||||  ||||||||||||||||||    
T  1440992 ggccaaataccacatttgatccttttagtttgacagaattcccaagttagtattttaagtttcaaaagttt 1441062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 5075337 - 5075446
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| |||||||| | |||||||||||||| |  | ||||||||||||||||||||| ||||| ||| ||| || || |||  ||||||| |||||||    
T  5075337 caaatatcatgtttgattcttttagtttgacagatctctcaagttagtcctttaagttttaaaag-tttcaattgagtccttttatttgacagaattctc 5075435  T
Q  186 aagttaatcct 196  Q
    |||||| ||||    
T  5075436 aagttagtcct 5075446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 19925170 - 19925267
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 200  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||| | | ||||||   |||||||||| ||| ||||  ||||||| ||||||||    
T  19925170 tccttttagtttgacacaatttccaa-ttagtcctttaagtttcaaaaatatcaaataggaccttttagtttaacagaatttccaagttagtcctttaa 19925267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 20366494 - 20366408
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||||||| | ||  || ||||||| |||| ||||||||||||||||||||  ||  | |||||||||||||||||||||||    
T  20366494 agttaataattaactaatgctactgtagccattaagttgttgacttggatcaaaacaatgtctgttaaaagctccagggtgtcaaaa 20366408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 28104297 - 28104359
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||||||||||||||||| || ||||  |||| ||||| ||||||||||||||||||||||||    
T  28104297 tttggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaata 28104359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 29590806 - 29590896
Alignment:
Q  317 ttttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    ||||||||| |  ||||||||||||  |||| || |||  ||| ||||||||||||  ||||||||||||| |||||||||||||||||||    
T  29590806 ttttaaaagttttagggtgtcaaaagattacgtttaatagtcataaatatcattttggcactataaatgtcatttaatagtgctagaaaga 29590896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 29591171 - 29591105
Alignment:
Q  167 ttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||| |||||| |||||||| |||||||| |||||||||||| || || |||||||||||||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagttt 29591105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 22876970 - 22876902
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||||  |||||||||  ||||| |||| |||||||||| ||||||||||||||||    
T  22876970 cttttagtttgacataatttccaagttaatt-tttaagtttcgaaagtttcaattaagtcattttagttt 22876902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 36566587 - 36566526
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||  |||||||| |||||||||||| ||||| |||||||||| |||||||||||||    
T  36566587 aaataccacttttggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaa 36566526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 39958694 - 39958763
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||| | |||||| || ||||| | || |||||||||| ||||||||||||||||    
T  39958694 cttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagttt 39958763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 40904698 - 40904767
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| |||||||||||||||||||||| || ||||| ||| ||||||||||| || ||| |||||||||    
T  40904698 cttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagttt 40904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 6220432 - 6220365
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||| | | |||| ||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  6220432 cttttagtttcatagaattctcaagttagtc-tttaagtttcaaaagttttcaataggttcttttagtt 6220365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 31175885 - 31175825
Alignment:
Q  281 agccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||| |||||||||||||| |||| ||| |||||||||||||| ||| ||||||||    
T  31175885 agccgttaagttgttgacttggatgaaaatgcttcattttaaaagctcgaggatgtcaaaa 31175825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 42889033 - 42888993
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  42889033 tcctttaagtttcaaaagtttcaaataagtcattttagttt 42888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 1346487 - 1346556
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| |||||| |||||| | |||||| |||| |||||||||| ||| || |||||||||    
T  1346487 cttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagttt 1346556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 5075351 - 5075420
Alignment:
Q  160 gattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 229  Q
    |||||||||||||||||| |  |||||||||| |||||||| ||| ||||||||||| | |||| |||||    
T  5075351 gattcttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaattgagtcctttta 5075420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 28257071 - 28256958
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||  ||| ||||||||||||||| | |||| | ||||||||  |||||||||  ||| ||| || ||| |  ||||||||||||| |||| |||    
T  28257071 aaataccactttttgtccttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttca 28256972  T
Q  187 agttaatcctttaa 200  Q
    ||||| ||||||||    
T  28256971 agttagtcctttaa 28256958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 4187656 - 4187624
Alignment:
Q  201 atttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||||||||||||||||||    
T  4187656 atttcaaaagtttcaaataagtcattttagttt 4187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 20183963 - 20184019
Alignment:
Q  285 gttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||| ||||||||||||||||||||| ||  |||||||||||  ||||||||||||    
T  20183963 gttaagttgttgacttggatcaaaacgttgtcttttaaaagcttgagggtgtcaaaa 20184019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 21413244 - 21413093
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||| || |||||||||||||||| |||| ||||  ||| |||||  ||| |||||| ||| ||| || |||   |||||| ||||||| ||||       
T  21413244 caaatactatttttggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatttct 21413145  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||| |  ||||| |||||||||||||||||| ||| |||||||| |||||    
T  21413144 aagttagtt-tttaagtttcaaaagtttcaaataggtccttttagttcataaa 21413093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 364
Target Start/End: Complemental strand, 28256894 - 28256795
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaa 363  Q
    |||| |||| || |||||| |||||||||||||| || || |||||  |||| |||||||||||| |||||||||||||  ||| || |||| |||||||    
T  28256894 ttaactgatgttgatgtagtcgttaaattgttgatttagaacaaaatactgc-ttttaaaagctctagggtgtcaaaattctacgtttaatggtcacaaa 28256796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 29591028 - 29590972
Alignment:
Q  285 gttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||| ||||||||||| ||||||| | ||| |||||||||||||||| ||||||||    
T  29591028 gttaagttgttgacttgaatcaaaatgatgctttttaaaagctccaggatgtcaaaa 29590972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 41113561 - 41113509
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    |||||||| |||||||||| ||||| ||||||||||||||| | |||||||||    
T  41113561 tcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcatttc 41113509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 6220492 - 6220359
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 203  Q
    |||||||||||| | ||||||||||||| | ||||||  ||  ||||||| ||  || | |||||||||| | | ||||||||||||| | |||||| ||    
T  6220492 cttttagtttgatataattttcaagttaattctttaaaattataaagtttcaataaggtacttttagtttcatagaattctcaagttagt-ctttaagtt 6220394  T
Q  204 tcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||||  |||| ||  |||||||| |||||    
T  6220393 tcaaaagttttcaataggttcttttagttgataaa 6220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 29591118 - 29591057
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagt--tagtcctttaagtttcaaaagttttaaata 159  Q
    |||| |||||||||||||||||   |||||  || |||||||||||||||||||||||||||    
T  29591118 ggtcattttagtttgacaaaatccgcaagttataatcctttaagtttcaaaagttttaaata 29591057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 41107269 - 41107319
Alignment:
Q  195 ctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    ||||||||||||||||| ||||||||||| || |||||| |||||| ||||    
T  41107269 ctttaaatttcaaaagtctcaaataagtctttatagtttttaaatcgtttc 41107319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 42991122 - 42991056
Alignment:
Q  167 ttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||| | || | ||||||||||||||||||||||  |||||| ||  |||||||||||||||    
T  42991122 ttagtttgaaaaaaatttcaagttaatcctttaaatttcggaagttttaatcaagtcattttagttt 42991056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 4187573 - 4187622
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    ||||| |||||||| ||||  ||||||||| |||||||||||||||||||    
T  4187573 ctttttgtttgacataattcccaagttagttctttaagtttcaaaagttt 4187622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 6220493 - 6220440
Alignment:
Q  163 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 216  Q
    ||||||||||||| |||||| |||||||||| ||||||| ||  ||||||||||    
T  6220493 tcttttagtttgatataattttcaagttaattctttaaaattataaagtttcaa 6220440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 10620284 - 10620239
Alignment:
Q  103 ccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  10620284 ccttttagtttaacagaatttccaagtaagtcctttaagtttcaaa 10620239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 19925230 - 19925271
Alignment:
Q  103 ccttttagtttgacaaaattttcaagttagtcctttaagttt 144  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||    
T  19925230 ccttttagtttaacagaatttccaagttagtcctttaagttt 19925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 27995636 - 27995563
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||| ||||||| || | |||||| |||||||| |||||||||||| |||||  || |||||||| |||||    
T  27995636 ttttagtatgacatattttttaagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaa 27995563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 31893593 - 31893524
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| ||||   |||||| |||||||| ||| ||||||||||| || ||| |||||||||    
T  31893593 cttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagttt 31893524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 33235097 - 33235150
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    ||||||||| |||||||| ||||  |||||||| ||||||| ||||||||||||    
T  33235097 ggtccttttggtttgacagaattcccaagttagacctttaaatttcaaaagttt 33235150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 38427803 - 38427754
Alignment:
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    ||||| |||||||||| ||||| ||||||||||||||| | |||||||||    
T  38427803 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcatttc 38427754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 35600079 - 35600119
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  35600079 tcctttaagtttcaaaagtctcaaataagtccttttagttt 35600119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 38427835 - 38427795
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||||||||| ||||||||| |||||    
T  38427835 tcctttaagtttcaaaagtttcaaacaagtcatttaagttt 38427795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 47219329 - 47219277
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    |||||||| ||||||||||  |||| ||||||||||||||| |||||| ||||    
T  47219329 tcctttaagtttcaaaagtcccaaacaagtcattttagtttttaaatcgtttc 47219277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 86)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 84 - 405
Target Start/End: Original strand, 25737090 - 25737419
Alignment:
Q  84 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 183  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||||    
T  25737090 gccaaataccatatttggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattc 25737189  T
Q  184 tcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc---------tctgttgtgagttaataattaattgatat 274  Q
      |||||| ||||||||||||||||||||||| ||| ||||||||| || |||||  |||||          ||| ||| |||||||||||||||||| |    
T  25737190 ctaagttagtcctttaaatttcaaaagtttcacatatgtcattttacttgataaactatttcatcgttacacctgctgtcagttaataattaattgatgt 25737289  T
Q  275 taatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttat 374  Q
    | ||||| ||||||| ||||| | |||||| |||||| ||||||||||||| | | ||||||||||| ||||  || |||| ||||||| |||| ||||     
T  25737290 tgatgtaaccgttaagttgttaaattggataaaaacgatgcattttaaaagtttc-gggtgtcaaaacgttaagtttaatggtcacaaacatcaatttag 25737388  T
Q  375 cactataaatgtcgtttaatagtgctagaaa 405  Q
    |||||||||||||||||||||||||||||||    
T  25737389 cactataaatgtcgtttaatagtgctagaaa 25737419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 94 - 399
Target Start/End: Complemental strand, 8714490 - 8714175
Alignment:
Q  94 atgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaat 193  Q
    ||||||| |||||||||||||| | ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||| ||||||| |    
T  8714490 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 8714391  T
Q  194 cctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt----------gtgagttaataattaattgatattaatgtagc 283  Q
      ||||| |||| ||||||| ||||| ||| |||||||| |||||  ||||| |||||          || ||| |||||||||||||| || |||||||    
T  8714390 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataattaattgatgttgatgtagc 8714291  T
Q  284 cgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaa 383  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||||||  ||||| ||||| || |||| ||| |||||||||| || || ||||||    
T  8714290 cgttaagttattgacttggatcaaaacgctgccttttaaaagctccagggtcacaaaacgttacgtttaatggtcaaaaatatcattctagcattataaa 8714191  T
Q  384 tgtcgtttaatagtgc 399  Q
    ||||||||||||||||    
T  8714190 tgtcgtttaatagtgc 8714175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 86 - 383
Target Start/End: Original strand, 23553343 - 23553650
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||||||||||| |||||||||||||||| |||| |||| ||  ||||||||||||| ||||||| || ||| | |||||||||||||| |||||||    
T  23553343 caaataccatgtttgatccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctc 23553442  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatatta 276  Q
    |||||  || |||||||||||||||||||||||| |||||||||||| |||||  ||||         | ||| ||| ||||||||||||| |||| ||     
T  23553443 aagttggtcttttaaatttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtcagttaataattaactgatgttg 23553542  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatc 375  Q
    |||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||| ||||| || |||  |||||||| |||||| || |    
T  23553543 atgtagccgttaaattgttgacttggatcaaaacgtcgtcttttaaaagctccagggtgtcaaaacgttacgtttaatcgtcacaaatgatcattctagc 23553642  T
Q  376 actataaa 383  Q
    ||||||||    
T  23553643 actataaa 23553650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 87 - 407
Target Start/End: Complemental strand, 30576803 - 30576473
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    |||||| | ||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||| || ||| | |||||||||||||| ||||| ||    
T  30576803 aaatactacgtttgatccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattccca 30576704  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatattaa 277  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||| |||||  ||||         | |||||||||||      |||| |||| |  |    
T  30576703 agttagtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacccctgttgtgagtctccgtttaactgatgtcga 30576604  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatca 376  Q
    |||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||| || |||  ||||| || |||||| || ||    
T  30576603 tgtagccgttaagttgttgacttggatcaaaacattgccttttaaaagctccagggtgtcaaaacgttacgtttaatcgtcacagatgatcattctagca 30576504  T
Q  377 ctataaatgtcgtttaatagtgctagaaaga 407  Q
    ||||||||||||||||||||||||| |||||    
T  30576503 ctataaatgtcgtttaatagtgctataaaga 30576473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 83 - 406
Target Start/End: Complemental strand, 39701540 - 39701206
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| || ||  | |||||||||||| | ||||    
T  39701540 ggccaaataccacgtttggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaatt 39701441  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgttg---------tgagttaataattaattgata 273  Q
    | ||  ||| || ||||| |||||||| ||||||||| ||| |||||||| |||||  | ||| |||||          | ||||||||||||| ||||     
T  39701440 cccagattagtcatttaagtttcaaaactttcaaataggtccttttagttgataaactacttcactgttacccctgctatcagttaataattaactgatg 39701341  T
Q  274 ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctc-cagggtgtcaaaatgttacattcaatgatcacaaa-tatcattt 371  Q
     |||| ||| |||||| ||||||||||||||||||| ||||  ||||||||||||  |||||||||||||||||| || |||  ||||||| |||||||     
T  39701340 ctaatttagacgttaagttgttgacttggatcaaaatgctgtcttttaaaagctctaagggtgtcaaaatgttacgtttaatcgtcacaaattatcattc 39701241  T
Q  372 tatcactataaatgtcgtttaatagtgctagaaag 406  Q
    || ||||||||||||||||||||||||||||||||    
T  39701240 tagcactataaatgtcgtttaatagtgctagaaag 39701206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 112 - 406
Target Start/End: Original strand, 6235747 - 6236048
Alignment:
Q  112 ttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa-gttaatcctttaaatttcaaaag 210  Q
    ||||||||||| |||||||||| ||||||||||||||    ||||||||||  ||||||||||||| |||||  || |||||||||||||||||||||||    
T  6235747 ttgacaaaattctcaagttagttctttaagtttcaaa----ttaaatagatcattttagtttgacagaattccgaaagttaatcctttaaatttcaaaag 6235842  T
Q  211 tttcaaataagtcattttagtttataaatcatttc---------tctgttgtgagttaataattaattgatattaatgtagccgttaaattgttgacttg 301  Q
    |||||||||    ||||||||| |||||  |||||         |||| ||| ||||||||||||||||||  | |||||||  |||| |||||||||||    
T  6235843 tttcaaatagactattttagttgataaactatttcacctttacctctgctgtcagttaataattaattgatgctgatgtagctattaagttgttgacttg 6235942  T
Q  302 gatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagtgct 400  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||| || |||| |||||||| |||||| || || |||||||||| ||||||||||||    
T  6235943 gatcaaaacgttgcattttaaaagctctagggtatcaaaatgttacgtttaatggtcacaaatgatcattctagcattataaatgtcatttaatagtgct 6236042  T
Q  401 agaaag 406  Q
    ||||||    
T  6236043 agaaag 6236048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 84 - 406
Target Start/End: Complemental strand, 9277129 - 9276805
Alignment:
Q  84 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 183  Q
    ||||||||||| ||| | || ||||||||||||| ||||  |||||||||| |||||||||| ||||||| || ||||| |||||||||||| | ||||     
T  9277129 gccaaataccacgtt-gatcattttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaattt 9277031  T
Q  184 tcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatat 274  Q
     ||||||| |||||||| |||||||||||||||||| ||| |||||||| |||||  ||||| | |||         || ||||||||||||||||||      
T  9277030 ccaagttagtcctttaagtttcaaaagtttcaaataggtc-ttttagttgataaactatttcaccgttacccttgctgtcagttaataattaattgat-- 9276934  T
Q  275 taatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcatttta 373  Q
        |||||| |||| ||||||||||||| ||||||||| | |||||||||||||||||||| |||| ||||| || ||| ||||||||| |||||| ||    
T  9276933 ----gtagccattaagttgttgacttggagcaaaacgctaccttttaaaagctccagggtgttaaaacgttacgtttaatcatcacaaatgatcattcta 9276838  T
Q  374 tcactataaatgtcgtttaatagtgctagaaag 406  Q
      ||||||||| ||||||||||||| |||||||    
T  9276837 ggactataaatatcgtttaatagtgttagaaag 9276805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 82 - 341
Target Start/End: Original strand, 8713830 - 8714098
Alignment:
Q  82 gggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataat 181  Q
    |||| ||||||||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || || ||||||||||||||||| |||    
T  8713830 gggctaaataccacttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaat 8713929  T
Q  182 tctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgat 272  Q
    || ||||||| || ||||| |||||||| |||||||||  ||||||||||| ||||||  |||| |         |||||  ||| |  | |||  ||||    
T  8713930 tcacaagttagtcttttaagtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttacccatgttggcagtaaccatttagctgat 8714029  T
Q  273 attaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
      ||||||||||||||| ||||||||||| ||||||| ||| | |||||||||||||||||| ||||||    
T  8714030 gctaatgtagccgttaagttgttgacttgaatcaaaatgctactttttaaaagctccagggtatcaaaa 8714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 9770933 - 9770778
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || ||  |  ||||||||||||| ||||    
T  9770933 ggccaaataccacttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaatt 9770834  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    | ||||||| |||||||| |||||||||||||||||| ||| |||||||| |||||    
T  9770833 cccaagttagtcctttaattttcaaaagtttcaaataggtccttttagttgataaa 9770778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 86 - 347
Target Start/End: Complemental strand, 31169628 - 31169361
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| || |||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||  ||||||||||||  |||||||    
T  31169628 caaatatcacgtttggtcattttagtttgacaaaattctcaagttagtcctttaagttttaaa-gtttcaaatagatcattttagtttgacgaaattctc 31169530  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgatatta 276  Q
    || ||| |||||||| ||| |||||||||||||| |||||||||||| |||||  ||||| |         || ||| ||||||||||||| ||||  |     
T  31169529 aaattagtcctttaagttttaaaagtttcaaatatgtcattttagttgataaaatatttcaccgttacccgtgatgtcagttaataattaactgatgctg 31169430  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttac 347  Q
    ||||  || |||| ||||||||||||||||||||| |   ||||||||||||   ||||||||||||||||    
T  31169429 atgtgaccattaagttgttgacttggatcaaaacgttatcttttaaaagctc--aggtgtcaaaatgttac 31169361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 100 - 238
Target Start/End: Original strand, 39700887 - 39701025
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| |||||||| || ||  | |||||||||||||| |||||  ||||||||||||||    
T  39700887 ggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatccttta 39700986  T
Q  200 aatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    | |||||||||||||||||| |||||||||||| |||||    
T  39700987 agtttcaaaagtttcaaatatgtcattttagttgataaa 39701025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 36359901 - 36360041
Alignment:
Q  98 ttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 197  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| || ||| |  ||||||||||||| ||||| ||||||| |||||    
T  36359901 ttggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtcctt 36360000  T
Q  198 taaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||| ||| |||||||||||||| |||||||||||| |||||    
T  36360001 taagttttaaaagtttcaaataggtcattttagttgataaa 36360041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 100 - 364
Target Start/End: Complemental strand, 40553369 - 40553105
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||| || | | | |||||||||||||| |||||||||||||||| |||     
T  40553369 ggtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 40553271  T
Q  200 aatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgatattaatgtagccgttaaa 290  Q
            ||||||||||||  |||||||| || |||||  ||||| |         || ||| |||||||||||||||||| || || ||||||||||     
T  40553270 --------aagtttcaaatagatcattttacttgataaactatttcaccgttacccttggtgtcagttaataattaattgatgttgatatagccgttaag 40553179  T
Q  291 ttgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||||||||| ||||||| | ||  ||||||||||||||||||||||||| | ||| || |||| ||||||||    
T  40553178 ttgttgacttgtatcaaaatgttgtcttttaaaagctccagggtgtcaaaacgctacctttaatggtcacaaat 40553105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 405
Target Start/End: Original strand, 4613739 - 4614057
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||  ||||||| || ||  | |||||||||||||| |||| || ||||| ||||    
T  4613739 tttggtccttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtcct 4613838  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatattaatgtagccgtt 287  Q
    |||| ||||||||||||||||||  |  ||||||||||||||  ||||         | |||  || ||||||||||||| ||||  | ||| |||||||    
T  4613839 ttaagtttcaaaagtttcaaatagattcttttagtttataaactatttcaccgctaaccctgccgtcagttaataattaactgatgctgatgcagccgtt 4613938  T
Q  288 aaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatgt 386  Q
    || ||||||||||| |||||||   ||||||||||||| | || |||||||||| |||   || |||  |||||||| |||||| || ||||| || |||    
T  4613939 aagttgttgacttgaatcaaaatattgcattttaaaagttacaaggtgtcaaaacgttgtgtttaatcgtcacaaatgatcattctagcactaaaattgt 4614038  T
Q  387 cgtttaatagtgctagaaa 405  Q
    | |||||||||||||||||    
T  4614039 catttaatagtgctagaaa 4614057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 245
Target Start/End: Original strand, 16197014 - 16197176
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||| |  |||||||||||| |||||||| |||| |||||||||||| ||||||||| ||||||| || ||  | |||||||||||||| ||||    
T  16197014 ggccaaatactacttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaatt 16197113  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    | |||||||||| ||||| |||||||||| ||||||| ||| |||||||| |||||| |||||    
T  16197114 cccaagttaatcatttaagtttcaaaagtatcaaataggtccttttagttaataaattatttc 16197176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 25730252 - 25730102
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat-agattcttttagtttgacataattctcaagttaatcctttaa 200  Q
    |||||||||||||| | ||||| ||||||||||||||||||||  ||||||| |||| || |  ||||| ||||||| ||||||||||||| ||||||||    
T  25730252 tccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaa 25730153  T
Q  201 atttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    ||||||||||||||||||| |||||||||||| |||||  ||||| |||||    
T  25730152 atttcaaaagtttcaaatatgtcattttagttgataaactatttcactgtt 25730102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 245
Target Start/End: Complemental strand, 29794405 - 29794243
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| ||| ||||||| ||||||||||||| ||||  |||||||||||||||| |||| |||||||| | ||| | |||||||||||||||||||    
T  29794405 ggccaaatatcatttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatt 29794306  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
      ||||||| || ||||| ||||||||||||||||||  || |||||||| |||||| |||||    
T  29794305 tccaagttagtcttttaagtttcaaaagtttcaaatagatccttttagttgataaattatttc 29794243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 196 - 407
Target Start/End: Original strand, 44040860 - 44041081
Alignment:
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaatgtagccgt 286  Q
    ||||| |||||||||||| ||||| |||||||||||| |||||  ||||| |||||         || ||||||||||||| ||||  | ||||| |  |    
T  44040860 tttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttatccctgctgttagttaataattaactgatgatgatgtaacttt 44040959  T
Q  287 taaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaata-tcattttatcactataaatg 385  Q
    ||  ||||||| ||| ||||||||| ||| |||||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| || |||||||||||    
T  44040960 taggttgttgagttgtatcaaaacgttgccttttaaaagctccaaggtgtcaaaatgttacatttaatggtgacaaatagtcattctagcactataaatg 44041059  T
Q  386 tcgtttaatagtgctagaaaga 407  Q
    ||||||||||||||||||||||    
T  44041060 tcgtttaatagtgctagaaaga 44041081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 44041417 - 44041280
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| || ||  | |||||||||||||| |||||  |||||| || || ||    
T  44041417 gtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtctttaaa 44041318  T
Q  201 atttcaaaagtttcaaataagtcattttagtttataaa 238  Q
     |||||||| |||||||||||||||||||||| |||||    
T  44041317 gtttcaaaaatttcaaataagtcattttagttgataaa 44041280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 25737736 - 25737588
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat-agattcttttagtttgacataattctcaagttaatcctttaaat 202  Q
    |||||||||||| | ||||| ||||||||||||||||||||  ||||||| |||| || |  ||||| ||||||| ||||||||||||| ||||||||||    
T  25737736 cttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaat 25737637  T
Q  203 ttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||||||||||  ||||||||||| |||||  ||||| |||||    
T  25737636 ttcaaaagtttcaaatatttcattttagttgataaactatttcactgtt 25737588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 405
Target Start/End: Complemental strand, 16197502 - 16197351
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    ||||||||||||| |||| ||  |||||  ||||| |||||||||| |||||||||| ||| ||||||||| | || |||||||||| ||||| || |||    
T  16197502 agttaataattaactgatgttggtgtagttgttaagttgttgacttagatcaaaacgttgccttttaaaagtttcaaggtgtcaaaacgttacgtttaat 16197403  T
Q  355 gatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaa 405  Q
    | |||||||| |||||| || |||||||||||||||||||||||||||||||    
T  16197402 ggtcacaaatgatcattctagcactataaatgtcgtttaatagtgctagaaa 16197351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 45018062 - 45017934
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| | |||||||||||||| | ||| ||    
T  45018062 aaataccacttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttgaca-agttc-ca 45017965  T
Q  187 agttaatcctttaaatttcaaaagtttcaaa 217  Q
    ||||| |||||||| |||||||| |||||||    
T  45017964 agttagtcctttaagtttcaaaaatttcaaa 45017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 217
Target Start/End: Complemental strand, 36360222 - 36360088
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  ||||||| ||||||||||||| ||||| |||||||||| |||||||||| ||||||| |||||  |  ||||| ||||||| ||||    
T  36360222 ggccaaataccaattttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaatt 36360123  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaa 217  Q
      ||||||| |||||||| ||||||||||||||||    
T  36360122 gccaagttagtcctttaagtttcaaaagtttcaaa 36360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 43423225 - 43423090
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| ||||   ||||||||  |||||||||| ||||||| || || | ||||||||||| | | ||||||||| ||| ||||    
T  43423225 tttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaatta-agtcttttagtttcatagaattctcaatttactcct 43423127  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||| |||||||||||||||||| |||||||||||||    
T  43423126 ttaagtttcaaaagtttcaaataggtcattttagttt 43423090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 29792665 - 29792558
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||| ||| ||||||||||||||||| ||||  ||| |||||||||||| |||| |||||||  | ||||| |||||||||||||||||||    
T  29792665 ggccaaataccatttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataatt 29792566  T
Q  183 ctcaagtt 190  Q
    ||||||||    
T  29792565 ctcaagtt 29792558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 238
Target Start/End: Original strand, 45017732 - 45017887
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||| |  ||||||||||||||||||| | ||||  ||||||||||||||||||||| ||||||| || ||  |  ||||||||| ||| ||||    
T  45017732 ggccaaatactacttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaatt 45017831  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    | ||| ||| ||||||||  ||||||| ||||||||||||||||||| || |||||    
T  45017832 cccaaattagtcctttaagattcaaaaatttcaaataagtcattttaattgataaa 45017887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 43422847 - 43422993
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||  |||| | |||||||||||| | |||| |||| ||||||||||||||||  ||||||| || ||| | |||||| |||  || ||||| ||    
T  43422847 aaataccacttttgattcttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaattccca 43422946  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||    
T  43422947 agttagtcctttaagtttcaaaagtttcaaataggtcattttagttt 43422993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 16208834 - 16208682
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||||| | ||| || ||||||||||||| |||| |||||||||| |||||||||| | |  ||| ||||||||  ||||||||| | | |||| ||    
T  16208834 caaataccacgattgatctttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagttttatagaattttc 16208735  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||| |||||| | |||||||||||||||||| ||| |||||||| |||||    
T  16208734 aagttagtcctttgagtttcaaaagtttcaaatatgtccttttagttgataaa 16208682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 100 - 208
Target Start/End: Original strand, 43422920 - 43423028
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||||||||| |||  |||||||  ||||||||||||||||||||||||||||| |||||| |  ||||||||||||| ||||  ||||||| |||||||    
T  43422920 ggtccttttattttagcaaaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtccttta 43423019  T
Q  200 aatttcaaa 208  Q
    |||||||||    
T  43423020 aatttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 14871496 - 14871369
Alignment:
Q  83 ggccaaatacca-tgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttag-tttgacataa 180  Q
    |||||||||||| | ||||||||||| ||||||||| ||||   ||||||||| |||||||||| ||||||| || ||| ||||||||| ||||||||||    
T  14871496 ggccaaataccactttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataa 14871397  T
Q  181 ttctcaagttaatcctttaaatttcaaa 208  Q
    ||||||| ||| |||||||| |||||||    
T  14871396 ttctcaaattagtcctttaagtttcaaa 14871369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 341
Target Start/End: Original strand, 40552750 - 40553014
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||||| |||| ||| ||||||||||||| ||||||||||||| || ||||| |||  ||||||| || ||   | ||||||||||||| |||| ||    
T  40552750 caaataccacgtttcgtcgttttagtttgacagaattttcaagttaatcatttaaattttgaaagtttcaattaagatattttagtttgacaaaattttc 40552849  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt----gtg-----agttaataattaattgatatta 276  Q
    ||||||  | |||||||||||||| ||||||||| ||  ||| | || |||||  ||||| |||||     ||     ||||||||||||||||||  |     
T  40552850 aagttagccatttaaatttcaaaaatttcaaataggttctttaaattgataaaatatttcactgttacccctgctaccagttaataattaattgatgctg 40552949  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    || |||||||||||||||| | || ||||||||  ||  ||||||||||||||||| ||||||||    
T  40552950 atttagccgttaaattgttaatttcgatcaaaatactatattttaaaagctccaggttgtcaaaa 40553014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 5358647 - 5358717
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | |||||||||    
T  5358647 tccttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagtt 5358717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 13771932 - 13771846
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| ||||||||| || ||||| |||||| |||||    
T  13771932 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttcactgtt 13771846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 385
Target Start/End: Original strand, 14871080 - 14871210
Alignment:
Q  256 gttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatg 355  Q
    |||||||||||| ||||  | ||| ||| ||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||| || ||||    
T  14871080 gttaataattaagtgatgctgatgcagctgttaagttgttgacttggatcaaaacgttggattttaaaagcttcagggtgtcaaaacgttacgtttaatg 14871179  T
Q  356 atcacaaat-atcattttatcactataaatg 385  Q
     |||||||| |||||| || |||||| ||||    
T  14871180 gtcacaaatgatcattctagcactatgaatg 14871210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 35434396 - 35434322
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  35434396 cttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaa 35434322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 251
Target Start/End: Original strand, 9276467 - 9276636
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataat 181  Q
    ||||||||| ||  |||||||||||||||||||||||||| ||||  |||| |||| ||||||  ||||||| || ||| |  || |||||||||| |||    
T  9276467 ggccaaatatcacttttggtccttttagtttgacaaaattctcaaaatagttcttttaagttttgaaagtttcaattaggtctttatagtttgacagaat 9276566  T
Q  182 tctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||| ||  |||| ||| |||||||||||||| ||| |||||||| |||||  ||||| |||||    
T  9276567 tctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttcactgtt 9276636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 39700823 - 39700960
Alignment:
Q  97 tttggtccttttagttt-gacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 195  Q
    |||| |||||||||||| ||||||||| | | ||||||| |||||||||  ||||||| || ||| | |||||||||||||| |||||| |||||| |||    
T  39700823 tttgctccttttagttttgacaaaattcttatgttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcc 39700922  T
Q  196 tttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| ||| ||||||||||| || ||| |||||||||    
T  39700923 tttaagttttaaaagtttcaattatgtccttttagttt 39700960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 13771954 - 13771878
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    ||||||||||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||    
T  13771954 ggccaaataccatttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaata 13771878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 13771425 - 13771492
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagtt 13771492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 23553994 - 23553847
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 203  Q
    |||||||||||||| |||| | ||||||||| |||||||||| || ||||||| ||  |  ||||||||||| | ||||||||||||| | | | || ||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtt 23553895  T
Q  204 tcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    ||||||||||||||||  |||| |||||| |||||| ||||| |||||    
T  23553894 tcaaaagtttcaaatagatcatgttagttaataaattatttcactgtt 23553847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 14870954 - 14871060
Alignment:
Q  112 ttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagt 211  Q
    |||||| |||||||||||||||| ||||| ||||||||| || ||||| || || ||| ||||||| |||||  |||||| |||||||||||| ||||||    
T  14870954 ttgacagaattttcaagttagtc-tttaaatttcaaaagattcaaataaatcctcttaatttgacagaattcataagttagtcctttaaattttaaaagt 14871052  T
Q  212 ttcaaata 219  Q
    ||||||||    
T  14871053 ttcaaata 14871060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 36314791 - 36314700
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgaca 177  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||| || ||  | ||||||||||||||    
T  36314791 caaataccacttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtttgaca 36314700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 34686969 - 34686896
Alignment:
Q  99 tggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||| ||||||| |||| ||||||||||||||||| ||| ||||||||||||||| | |||||||||    
T  34686969 tggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagtt 34686896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 23179033 - 23179096
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaa 147  Q
    ||||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  23179033 ggccaaataccat-tttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 40553432 - 40553296
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| ||||   || |||||||||| ||||| |||||||| ||  || | |||||||||||||| ||||   |||||| || |    
T  40553432 tttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtctt 40553333  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||| ||||||||||||||| |  ||| |||||||||    
T  40553332 ttaagtttcaaaagtttcaatttggtccttttagttt 40553296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 83 - 341
Target Start/End: Original strand, 30576137 - 30576404
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| ||  ||||||| |||||| |||||| ||||  |||||||||||||||| |||  ||||||| || ||  | ||||||||||| || ||||    
T  30576137 ggccaaatatcacttttggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatt 30576236  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctct---------gttgtgagttaataattaattgata 273  Q
      ||||||| || ||||| ||| |||||||||||||  ||| |||||||| |||||  ||||| ||         ||||| |||      |||| ||||     
T  30576237 tccaagttagtcttttaagtttgaaaagtttcaaattggtctttttagttgataaactatttcactattacccttgttgtcagtctccgtttaactgatg 30576336  T
Q  274 ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    || ||||||||||||| ||||||||||| ||||||| | ||| ||||||||||||  |||||||||||    
T  30576337 ttgatgtagccgttaagttgttgacttgaatcaaaatgttgccttttaaaagctcgggggtgtcaaaa 30576404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 35433896 - 35433971
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||||| ||||| | ||||  |||||||||| |||||||||||||||||||||||||||  ||||||||    
T  35433896 tttggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagtt 35433971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 11113536 - 11113661
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  || | |||||||||||||||| ||||   ||||||||||||||| |||  ||||||| ||  || | |||||||||||||| ||||    
T  11113536 ggccaaataccactttagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatt 11113635  T
Q  183 ctcaagttaatcctttaaatttcaaa 208  Q
      ||||||| |||||||| |||||||    
T  11113636 tccaagttagtcctttaagtttcaaa 11113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 337
Target Start/End: Complemental strand, 14871314 - 14871241
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtc 337  Q
    |||||||||  | |||||| |||||| ||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  14871314 ttaattgatgctgatgtagtcgttaagttgttgacttggatcaaaacgatgccttttaaaagcttcagggtgtc 14871241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 43423159 - 43423062
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 201  Q
    |||||||||| | | |||| |||| ||| ||||||||||||||||||||| |||||| |  ||||||||||||| ||||| ||||||| | |||||||    
T  43423159 cttttagtttcatagaattctcaatttactcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagttagtactttaaa 43423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 6236359 - 6236251
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||||||||||||| ||||||||  ||||||| | ||||||||||||| ||||| || ||| | |||||| ||||||| | ||| ||||||| | |||||    
T  6236359 ggtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtacttta 6236260  T
Q  200 aatttcaaa 208  Q
    | |||||||    
T  6236259 agtttcaaa 6236251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 5358649 - 5358736
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||||||| |||| |||||||| ||||| || |||||||||||| ||||| ||| |||||||| |||||  ||||| |||||    
T  5358649 cttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttcgctgtt 5358736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 34686964 - 34686890
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||| ||||||| |||| |||||||| |||||||||||| |||||||| ||||| ||| |||||||| |||||    
T  34686964 cttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaa 34686890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 35434403 - 35434341
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    ||||||||||||||||||||| ||||   |||||| ||||||||||||||||||||| |||||    
T  35434403 tttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaata 35434341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 41190398 - 41190328
Alignment:
Q  163 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||| ||| |||||| || |||||||||||||    
T  41190398 tcttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagttt 41190328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 9770546 - 9770671
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||| ||||||  |||| ||||| ||| |||||| ||||  ||||||| || |||||||||| ||||||| || ||  | |||||||||||| | ||||    
T  9770546 ggccagataccacttttgctccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaatt 9770645  T
Q  183 ctcaagttaatcctttaaatttcaaa 208  Q
    ||||||||| || ||||| |||||||    
T  9770646 ctcaagttagtcatttaagtttcaaa 9770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 11113794 - 11113729
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||  ||||| |||||||||||||    
T  11113794 ggccaaataccatttttggtccttttaatttgacaaaattcccaaactagtcttttaagtttcaaa 11113729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 36314773 - 36314704
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| |||| |||||||| || |||||||||| |||||||||| || ||| |||||||||    
T  36314773 cttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagttt 36314704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 9770624 - 9770731
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 200  Q
    ||||||||||||||| | |||| ||||||||||| |||||||||||||         ||| | |||||||||||||| |||||  |||||| ||||||||    
T  9770624 gtccttttagtttgagagaattctcaagttagtcatttaagtttcaaa---------taggtccttttagtttgacagaattccgaagttagtcctttaa 9770714  T
Q  201 atttcaaaagtttcaaa 217  Q
     |||||||| |||||||    
T  9770715 gtttcaaaaatttcaaa 9770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 29030243 - 29030175
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||||   ||||| |||||||| |||| |||||||||| |||||| |||||||||    
T  29030243 ttttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagttt 29030175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 6236175 - 6236096
Alignment:
Q  284 cgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaa 363  Q
    |||||| |||||||||| |||||||||||||  ||||||| | | ||||||||||||||| ||| || |||| |||||||    
T  6236175 cgttaagttgttgacttagatcaaaacgctgtcttttaaatgtttcagggtgtcaaaatgctacgtttaatggtcacaaa 6236096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 11113551 - 11113626
Alignment:
Q  158 tagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| ||||||||||||||||||||  |||||| ||||||||||||  ||||||||||  | ||| |||||||||    
T  11113551 tagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagttt 11113626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 25730193 - 25730134
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||| ||||| ||||||| |||| ||||||||||||||||| |||||||||||| |||||    
T  25730193 ggtcattttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaata 25730134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 25737679 - 25737620
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||| ||||| ||||||| |||| ||||||||||||||||| |||||||||||| |||||    
T  25737679 ggtctttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaata 25737620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 40553312 - 40553261
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||||||||||||| |||| |||||||| || |||||||||||||    
T  40553312 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 40553261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 44040822 - 44040884
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    ||||||||||||||||| ||| ||||| ||| |||| | |||||||||||||||||||||||||    
T  44040822 tttggtccttttagtttaacagaatttacaaattag-cttttaagtttcaaaagttttaaatag 44040884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 9276658 - 9276740
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgtta 346  Q
    |||| |||| || |||||||| |||| ||||||||||||||||||| | ||| ||||||||| || ||| |||||||| ||||    
T  9276658 ttaactgatgttcatgtagcctttaagttgttgacttggatcaaaatgatgccttttaaaagttcgaggatgtcaaaacgtta 9276740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 23179160 - 23179238
Alignment:
Q  286 ttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||| |||||||||||||||||||  |||  ||||||||||| ||| ||||||||| | ||| || |||||||||||||    
T  23179160 ttaagttgttgacttggatcaaaatactgtcttttaaaagcttcagagtgtcaaaacgctacgtttaatgatcacaaat 23179238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 43422860 - 43422934
Alignment:
Q  160 gattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttta 234  Q
    |||||||||||||||| ||||||||||| ||| |||||||| |||  |||||||||| || ||| ||||| ||||    
T  43422860 gattcttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttatttta 43422934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 44041216 - 44041150
Alignment:
Q  293 gttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatca 359  Q
    ||||||||||||||||| ||| | ||||||||||| ||||||||||||| | ||| || ||||||||    
T  44041216 gttgacttggatcaaaatgctaccttttaaaagcttcagggtgtcaaaacgctacgtttaatgatca 44041150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 337
Target Start/End: Complemental strand, 5359027 - 5358954
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtc 337  Q
    |||| |||| || |||||||  |||| |||||||||| |||||||| ||||| ||||||||||||||| |||||    
T  5359027 ttaactgatgttgatgtagcttttaagttgttgactttgatcaaaaagctgccttttaaaagctccagagtgtc 5358954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 9770674 - 9770723
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 149  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||    
T  9770674 ggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaa 9770723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 16197204 - 16197281
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||| |||| || || |||| |||||||||||||||||||||||||   ||| ||||||||||| || ||||||||||    
T  16197204 ttaactgatgttgatctagctgttaaattgttgacttggatcaaaatattgccttttaaaagcttcaaggtgtcaaaa 16197281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 25730067 - 25730003
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||||| |||||| ||||||||||||||||||| | | | |||||||||||||| ||||| ||||    
T  25730067 atgtagtcgttaagttgttgacttggatcaaaatgttaccttttaaaagctccatggtgtaaaaa 25730003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 25737553 - 25737489
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||||| |||||| ||||||||||||||||||| | | | |||||||||||||| ||||| ||||    
T  25737553 atgtagtcgttaagttgttgacttggatcaaaatgttaccttttaaaagctccatggtgtaaaaa 25737489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 36360200 - 36360136
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 229  Q
    ||||||||||||| ||||  ||||||| || ||||| |||| ||||||||||||||||| |||||    
T  36360200 ttttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtcttttta 36360136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 370 - 405
Target Start/End: Original strand, 25729898 - 25729933
Alignment:
Q  370 tttatcactataaatgtcgtttaatagtgctagaaa 405  Q
    |||| |||||||||||||||||||||||||||||||    
T  25729898 tttagcactataaatgtcgtttaatagtgctagaaa 25729933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 35433903 - 35433990
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||| ||||| | ||||| ||||||| || ||||| |||||||||||| |||||  || |||||||| |||||| ||||| |||||    
T  35433903 cttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttcactgtt 35433990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 13771425 - 13771479
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaata 219  Q
    ||||||||||||| |||| |||||||| || ||||| ||| ||||||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaata 13771479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 29792644 - 29792594
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttc 214  Q
    |||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||    
T  29792644 cttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttc 29792594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 41190413 - 41190292
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| || |||||||| ||||||||||||| |||| |||| ||||| |||||| |||| ||| ||| || ||| |  ||||||||||| | ||||||||    
T  41190413 aaatagcacgtttggtc-ttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctca 41190315  T
Q  187 agttaatcctttaaatttcaaaa 209  Q
    |  || || ||||| ||||||||    
T  41190314 atctagtcatttaagtttcaaaa 41190292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 23553825 - 23553749
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||| |||| || |||||| | |||| ||||||||||||||||||| | ||  |||||||||||| ||||||||||||    
T  23553825 ttaactgatgttgatgtagtctttaagttgttgacttggatcaaaatgatg-tttttaaaagctcgagggtgtcaaaa 23553749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 45018045 - 45017976
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| |||  |||||||| |||||||| |||| ||||||| || || ||| |||||||||    
T  45018045 cttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagttt 45017976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 13797272 - 13797232
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  13797272 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 13797232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 34686834 - 34686778
Alignment:
Q  285 gttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||| ||| ||| ||||||||||| | ||||||||||| ||| |||||||||||||    
T  34686834 gttaagttgctgatttggatcaaaatgttgcattttaaatgcttcagggtgtcaaaa 34686778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 39701073 - 39701136
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||||||| ||||||||||  ||||||| | ||| |||||||||||| || |||||||||    
T  39701073 atgtagccgttaagttgttgactt-tatcaaaatgttgccttttaaaagctcgagtgtgtcaaaa 39701136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 83 - 407
Target Start/End: Complemental strand, 11528183 - 11527849
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||| | |||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| |    
T  11528183 ggccaaatacaacgtttggtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattcttttagtttgacataagt 11528084  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgt---------tgtgagttaataattaattgata 273  Q
    | ||| |||||||||||| |||||||||||||||||| |||||||||||| |||||  ||||| ||||         ||| ||||||||||||||||||     
T  11528083 cccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttactcatgctgttagttaataattaattgatg 11527984  T
Q  274 ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatca-tttt 372  Q
     | ||  | ||||| | |||||||||||||||||||| |||  ||||||||| ||||||||||||||| ||||  || |||| |||||||||||| ||||    
T  11527983 ctgatacaaccgttcagttgttgacttggatcaaaacactgtcttttaaaagttccagggtgtcaaaacgttatgtttaatggtcacaaatatcattttt 11527884  T
Q  373 atcactataaatgtcgtttaatagtgctagaaaga 407  Q
    | |||||||||||||||| ||| ||| ||||||||    
T  11527883 accactataaatgtcgttcaattgtgttagaaaga 11527849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 87 - 407
Target Start/End: Original strand, 17179614 - 17179943
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||| |||| | |||||| ||||||| ||||  |||| ||| | |||||||||| ||| |||||| ||| | | |||||||||| | |||| |||    
T  17179614 aaataccatatttgtttcttttattttgacagaattcacaaggtagccttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttca 17179713  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaa 277  Q
    ||||| ||||||||||||||||| ||||||||| ||| |||||||| |||| ||||||| | |||         || ||||||||||||| ||||  | |    
T  17179714 agttagtcctttaaatttcaaaaatttcaaataggtccttttagttgataagtcatttcaccgttactcctgctgtcagttaataattaactgatgctga 17179813  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatca 376  Q
    ||||| |||||| |||||||||| |||||||  | | | ||||||||||||||||||||||||| |||||  | |||| |||||||| |||||| || ||    
T  17179814 tgtagtcgttaagttgttgacttagatcaaat-gttaccttttaaaagctccagggtgtcaaaacgttacgcttaatggtcacaaatgatcattctagca 17179912  T
Q  377 ctataaatgtcgtttaatagtgctagaaaga 407  Q
    |||||||||||||||||||||||||||||||    
T  17179913 ctataaatgtcgtttaatagtgctagaaaga 17179943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 407
Target Start/End: Complemental strand, 17132265 - 17132023
Alignment:
Q  171 tttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt------gtgagttaataat 264  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||  ||||  | |||      || ||||| ||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaaagattcaaataagtcatattagtttataaactattttaccgttactcctgttagttattaat 17132166  T
Q  265 taattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||||||  | ||||| |||||||||||||||| ||||||||| |  ||| ||||||||| |||||||||||||||| ||||||| |||| | ||||||    
T  17132165 taattgatgctgatgtaaccgttaaattgttgacctggatcaaa-cattgccttttaaaagttccagggtgtcaaaatattacatttaatggttacaaat 17132067  T
Q  365 -atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
     |||||| || |||| ||||||||||||||||||||||||||||    
T  17132066 gatcattctagcactgtaaatgtcgtttaatagtgctagaaaga 17132023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 87 - 336
Target Start/End: Complemental strand, 2840186 - 2839937
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| || |||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||  ||||||| |||||||||| ||| ||||||||    
T  2840186 aaatatcacgtttggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaacagaattctca 2840087  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc---------tctgttgtgagttaataattaattgatattaa 277  Q
    |||||||| |||         |||||||||||| |||||||||||| |||||  |||||          ||||||| ||||||||||||||||||||| |    
T  2840086 agttaatcattt---------aagtttcaaataggtcattttagttgataaactatttcaccgttatacctgttgttagttaataattaattgatattga 2839996  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgt 336  Q
    |||||||||||| | ||||| ||||||||||||||||  ||||||||||| ||||||||    
T  2839995 tgtagccgttaagtggttgatttggatcaaaacgctgttttttaaaagcttcagggtgt 2839937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 17180277 - 17180122
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||| ||||||||||||||||| | | |||||| || ||| ||||||||||||| |||||||||| ||  | |||||||||||||||||||    
T  17180277 ggccaaataccatttttggtccttttagttttatataatttttaaattaatcctttaagtttcgaaagttttaattatgtccttttagtttgacataatt 17180178  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
     |||||||| |||||||| ||| ||||||||||||||  ||||||||||| |||||    
T  17180177 ttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagttgataaa 17180122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 238
Target Start/End: Original strand, 20575398 - 20575553
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||   |||||||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||| | ||||    
T  20575398 ggccaaataccactattggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatt 20575497  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
      ||||||| |||||||| ||| |||||||||||||| ||||||| |||| |||||    
T  20575498 tccaagttagtcctttaagttttaaaagtttcaaataggtcatttcagttgataaa 20575553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 32417459 - 32417605
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||  |  ||||||||||||| |||| |||    
T  32417459 aaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttca 32417558  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| || ||||| |||||||||||| ||||| ||| |||||||||    
T  32417559 agttagtcatttaagtttcaaaagttttaaatatgtccttttagttt 32417605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 32423300 - 32423446
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||  |  ||||||||||||| |||| |||    
T  32423300 aaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttca 32423399  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| || ||||| |||||||||||| ||||| ||| |||||||||    
T  32423400 agttagtcatttaagtttcaaaagttttaaatatgtccttttagttt 32423446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 32417537 - 32417641
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||||||| ||||  ||| ||| |||||||| |||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32417636  T
Q  205 caaaa 209  Q
    |||||    
T  32417637 caaaa 32417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 32423378 - 32423482
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||||||| ||||  ||| ||| |||||||| |||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32423477  T
Q  205 caaaa 209  Q
    |||||    
T  32423478 caaaa 32423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 2839625 - 2839736
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||| ||||| | |||| ||||||||||| |||||||||||||||||| || ||| | |||||| ||||||| ||||||||||||| ||||    
T  2839625 tttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcct 2839724  T
Q  197 ttaaatttcaaa 208  Q
    ||||||||||||    
T  2839725 ttaaatttcaaa 2839736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 9902400 - 9902278
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| ||| |||||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||  | |||||||||||||||||||| |    
T  9902400 caaatatcatttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataattccc 9902301  T
Q  186 aagttaatcctttaaatttcaaa 208  Q
     ||||| | |||||| |||||||    
T  9902300 gagttagttctttaagtttcaaa 9902278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 10862720 - 10862570
Alignment:
Q  89 ataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaag 188  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||  ||||||| || ||  |  ||||||||||| | ||||| | ||    
T  10862720 ataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccag 10862621  T
Q  189 ttaatc-ctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||| ||  |||||||||||||||||||||||| ||| |||||||| |||||    
T  10862620 ttagtcattttaaatttcaaaagtttcaaataggtccttttagttgataaa 10862570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 24139644 - 24139479
Alignment:
Q  84 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 183  Q
    |||||||| ||  |||| ||||||||||| |||| ||||  ||| ||||||||||||||||| |||||||||| ||  | |||||||||||| | ||||     
T  24139644 gccaaatatcaattttgatccttttagtt-gacataattcacaaattagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaatta 24139546  T
Q  184 tcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgt 250  Q
    ||| |||| |||||||| |||||||| ||||||||||||| |||||||| |||||| ||||| ||||    
T  24139545 tcaggttagtcctttaagtttcaaaaatttcaaataagtctttttagttgataaattatttcactgt 24139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 16168826 - 16168679
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||  |||| || ||||||||||||| ||||| ||| |||||| ||||||||||  |||||| || ||| | |||||||||||||| |||||||    
T  16168826 caaataccacttttgatctttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctc 16168727  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||| ||  |||  |||||||||||||||||| ||| |||||||||    
T  16168726 aagttagtctattacgtttcaaaagtttcaaataggtctttttagttt 16168679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 340
Target Start/End: Original strand, 17131620 - 17131773
Alignment:
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc----------tctgttgtgagttaataattaattgatattaatgtagccg 285  Q
    ||||| |||||||||||| ||||| |||||||||||| |||||| |||||          |||||||| ||||| || ||||||||| || ||||| |||    
T  17131620 tttaagtttcaaaagttttaaatatgtcattttagttgataaattatttcactgttaccctctgttgtcagttattatttaattgatgttgatgtaaccg 17131719  T
Q  286 ttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaa 340  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  17131720 ttaaattgttgacttggatc-aaacgttgcattttaaaagttccagggtgtcaaa 17131773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 11527526 - 11527647
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||  ||||||||||||| ||||||| ||||   |||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||| ||    
T  11527526 aaataccacttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcaca 11527625  T
Q  187 agttaatcctttaaatttcaaa 208  Q
    ||||| |||||||| |||||||    
T  11527626 agttagtcctttaagtttcaaa 11527647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 406
Target Start/End: Original strand, 9902090 - 9902218
Alignment:
Q  279 gtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaa-tatcattttatcac 377  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||||||| ||  |||| |||| ||||| || |||  |||||||  |||||| || |||    
T  9902090 gtagccattaagttgttgacttggatcaaaacgctgccttttaaaagcttcaaagtgttaaaacgttacgtttaatcgtcacaaacgatcattctagcac 9902189  T
Q  378 tataaatgtcgtttaatagtgctagaaag 406  Q
    ||||||||||||||||||||| |||||||    
T  9902190 tataaatgtcgtttaatagtgatagaaag 9902218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 16168451 - 16168576
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  ||||||||||||||||||| | |||| ||| |||||||||||||||||  ||||||| || ||| |  ||||||||||||| ||||    
T  16168451 ggccaaataccacttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaatt 16168550  T
Q  183 ctcaagttaatcctttaaatttcaaa 208  Q
      ||||||| |||||||| |||||||    
T  16168551 tccaagttagtcctttaagtttcaaa 16168576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 364
Target Start/End: Original strand, 10962746 - 10963014
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||||||||||||||||   |||||| ||  | ||||||| ||||||| || ||||| |||||| ||| | | ||||   || ||| |||||||| |||    
T  10962746 ttttagtttgacaaaattccaaagttattctgtaaagtttcgaaagtttcaattagatccttttattttaatagaatttctaaattagtcctttaagttt 10962845  T
Q  205 caaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaatgtagccgttaaattgtt 295  Q
     |||||||||||||| |||||||||||| |||||  ||||  | |||         || ||||||||||||| ||||  | ||||||||||||| |||||    
T  10962846 taaaagtttcaaatatgtcattttagttgataaactattttaccgttacccttgctgtcagttaataattaactgatgctgatgtagccgttaagttgtt 10962945  T
Q  296 gacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||||||||||| ||||  |||||||||||  ||| |||||||| | ||| || |||| ||||||||    
T  10962946 gacttggatcaaaatgctgttttttaaaagctttaggatgtcaaaacgctacgtttaatggtcacaaat 10963014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 20575783 - 20575677
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||| ||||||| ||||||||||||| |||| ||||||||||  |||||||||| |||||||||||||  | |||||||||||||| ||||    
T  20575783 ggccaaataccatttttggtc-ttttagtttgacagaattctcaagttagtt-tttaagtttcgaaagttttaaataagtccttttagtttgacaaaatt 20575686  T
Q  183 ctcaagtta 191  Q
    | |||||||    
T  20575685 cccaagtta 20575677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 32417851 - 32417696
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  |||| || ||||||||| ||| ||||  ||||||||| |||||| |||| ||||||| || ||| | |||| ||||||||| ||||    
T  32417851 ggccaaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatt 32417752  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
       |||||| || ||||| ||||| |||||||||||| ||| |||||||| |||||    
T  32417751 tctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaa 32417696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 32423692 - 32423537
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  |||| || ||||||||| ||| ||||  ||||||||| |||||| |||| ||||||| || ||| | |||| ||||||||| ||||    
T  32423692 ggccaaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatt 32423593  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
       |||||| || ||||| ||||| |||||||||||| ||| |||||||| |||||    
T  32423592 tctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaa 32423537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 16168752 - 16168644
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||||||||||||||||| |||| |||||||||||  ||| ||||||||||||| |||||| |  ||||||||||||  || || ||||||| || ||||    
T  16168752 ggtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtttgactgaaatcccaagttagtctttta 16168653  T
Q  200 aatttcaaa 208  Q
    | |||||||    
T  16168652 agtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 9901959 - 9902022
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    |||||||||||||||||| || ||||| ||||||||| |||| |||||||||||||||||||||    
T  9901959 tttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaatag 9902022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 10407316 - 10407403
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||||||| |||||  | |||| | |||||| |||||||||||||||||| |||||||||||| |||||| ||||| |||||    
T  10407316 cttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactgtt 10407403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 20575670 - 20575600
Alignment:
Q  148 aagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaat 218  Q
    |||||| |||||| | |||||||||||||| ||||| ||||||| |||||||| |||||||||||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 20575658 - 20575600
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat 158  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  20575658 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 24139157 - 24139311
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaa-ttgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaa 353  Q
    |||||||||||||  |||  | ||||||| |||||| |||||||||| |||||||||| || |||||||||| || ||| | | |||| ||||  || ||    
T  24139157 agttaataattaacagatgctgatgtagctgttaaagttgttgacttagatcaaaacgttgtattttaaaagttctaggatattaaaacgttatgtttaa 24139256  T
Q  354 tgatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    || |||||||| ||||||||| ||| |||||||   |||||||||||||||||||    
T  24139257 tggtcacaaattatcattttagcaccataaatgctatttaatagtgctagaaaga 24139311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 9946818 - 9946718
Alignment:
Q  108 tagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaa 207  Q
    |||||||||| |||||  ||||||||||||||| | || ||||||| || ||| |  ||||||||||||||||||  ||| ||| |||||||||||||||    
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagtttgacataatttccaaattagtcctttaaatttcaa 9946719  T
Q  208 a 208  Q
    |    
T  9946718 a 9946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 28630561 - 28630497
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||||| |||||| ||||||||||||||||||| ||||| ||||||||| | |||||||||||||    
T  28630561 atgtagtcgttaagttgttgacttggatcaaaatgctgccttttaaaagttacagggtgtcaaaa 28630497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 32417593 - 32417649
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaa 157  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||    
T  32417593 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaa 32417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 32423434 - 32423490
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaa 157  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||    
T  32423434 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaa 32423490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 9946664 - 9946586
Alignment:
Q  263 attaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||||  | || |||||||||| ||||| |||||||||| || | ||||||||||||||| |||||||||||||    
T  9946664 attaattgattctgatatagccgttaagttgttaacttggatcagaatgttgcattttaaaagcttcagggtgtcaaaa 9946586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 28630318 - 28630428
Alignment:
Q  286 ttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaatg 385  Q
    |||| |||||||||||||| |||| | |   ||||||||||| | ||||||||||||||||| || |||| |||||||        ||||||||||||||    
T  28630318 ttaagttgttgacttggattaaaatgtt---ttttaaaagcttcggggtgtcaaaatgttacgtttaatggtcacaaa--------tatcactataaatg 28630406  T
Q  386 tcgtttaatagtgctagaaaga 407  Q
    | ||||||||||||||||||||    
T  28630407 ttgtttaatagtgctagaaaga 28630428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 24139443 - 24139388
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagg 332  Q
    |||||||| |||| |||||||||||||||||||| || ||||||||||||| ||||    
T  24139443 atgtagccattaagttgttgacttggatcaaaacactacattttaaaagcttcagg 24139388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 9946818 - 9946753
Alignment:
Q  168 tagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||   |||||| |||||||||| || |||||||||| || |||||||||||||    
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagttt 9946753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 11527543 - 11527612
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||| |||||||||||||  |||||| |||||||| |||| |||||||||| || ||| |||||||||    
T  11527543 cttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttt 11527612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 16168472 - 16168541
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||| | |||||||| |||| |||||||| |||  |||||||||| || |||||||||||||    
T  16168472 cttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagttt 16168541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 17180076 - 17180012
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||||| |||||| ||||||||||| ||||||| ||||| |||||||| ||| | ||||||||||    
T  17180076 atgtagtcgttaagttgttgacttgaatcaaaatgctgccttttaaaaactcgatggtgtcaaaa 17180012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 9902384 - 9902313
Alignment:
Q  162 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||| |||| |||||||| || ||||| |||| ||||||| || || ||| |||||||||    
T  9902384 ttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagttt 9902313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 9901966 - 9902040
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||||| || ||||  ||||||| | |||| | |||||||||||| ||||| |||||||||||| |||||    
T  9901966 cttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaa 9902040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 10407313 - 10407371
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    ||||||||||||||||||||||   | |||| | ||||||||||||||||||| |||||    
T  10407313 gtccttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaata 10407371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 2839632 - 2839697
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 229  Q
    |||||| ||||| | ||||||||||||| || ||||| ||||||||||||||| || ||| |||||    
T  2839632 cttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtcctttta 2839697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 10963198 - 10963161
Alignment:
Q  196 tttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  10963198 tttaaatttcaaaagttttaaataggtcattttagttt 10963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 32417678 - 32417641
Alignment:
Q  202 tttcaaaagtttcaaataagtcattttagtttataaat 239  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  32417678 tttcaaaagtttcaaatatgtcattttagtttaaaaat 32417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 32423519 - 32423482
Alignment:
Q  202 tttcaaaagtttcaaataagtcattttagtttataaat 239  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  32423519 tttcaaaagtttcaaatatgtcattttagtttaaaaat 32423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 6503615 - 6503655
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||||||||| ||||| |||||||||    
T  6503615 tcctttaagtttcaaaagtttcaaacaagtctttttagttt 6503655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 9946766 - 9946718
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    |||| ||||||||||||| ||||| ||| |||||||||||| |||||||    
T  9946766 ggtcattttagtttgacataatttccaaattagtcctttaaatttcaaa 9946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 251
Target Start/End: Complemental strand, 10407800 - 10407712
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttc-aaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||| ||  ||||||||||||| || || || |||  |||||||||||||| |||||||||||| |||||  ||||| |||||    
T  10407800 cttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttcactgtt 10407712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 10963229 - 10963161
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagttt 173  Q
    ||||| ||||| | ||| |||||||||||  ||||| ||||||||||||||||||| |  |||||||||    
T  10963229 ttttaatttgatagaatattcaagttagttttttaaatttcaaaagttttaaataggtcattttagttt 10963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 11527703 - 11527803
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaa 363  Q
    |||||||||  | |||||| |||||| ||||||| ||||||||||| | | | |||||||||||  ||| |||||||| | ||| || |||| |||||||    
T  11527703 ttaattgatgctgatgtagtcgttaagttgttgagttggatcaaaatgttaccttttaaaagcttaaggctgtcaaaacgctacttttaatggtcacaaa 11527802  T
Q  364 t 364  Q
    |    
T  11527803 t 11527803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 17132265 - 17132217
Alignment:
Q  111 tttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    ||||||| |||| |||||||| |||||||||||||||||| || |||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaaagattcaaata 17132217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 17428229 - 17428269
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||||| |||| ||||| |||||||||    
T  17428229 tcctttaaatttcaaaagttccaaacaagtccttttagttt 17428269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 17515004 - 17515044
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  17515004 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 17515044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 24139038 - 24139074
Alignment:
Q  137 ttaagtttcaaaagttttaaatagattcttttagttt 173  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  24139038 ttaagttttaaaagttttaaatagattcgtttagttt 24139074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 121; Significance: 7e-62; HSPs: 3)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 97 - 400
Target Start/End: Original strand, 21 - 331
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||  |||||  |||||| |  |    
T  21 tttggtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttagt-at 119  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc---------tctgttgtgagttaataattaattgatattaatgtagccgtt 287  Q
    |||| ||| |||||||||||||| |||||||||||| |||||  |||||          ||||||| |||||||||||||||||| || ||||| | |||    
T  120 ttaagtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttactcctgttgtcagttaataattaattgatgttgatgtaacggtt 219  T
Q  288 aaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaatgtc 387  Q
    || |||||||  ||||||||| || ||| ||||||||||| | ||||||||||| ||||| || |||| ||||||| ||||||||| |||||||||||||    
T  220 aagttgttgatgtggatcaaagcgatgccttttaaaagcttc-gggtgtcaaaacgttacgtttaatggtcacaaacatcattttagcactataaatgtc 318  T
Q  388 gtttaatagtgct 400  Q
    |||||||||||||    
T  319 gtttaatagtgct 331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 98 - 251
Target Start/End: Complemental strand, 658 - 505
Alignment:
Q  98 ttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 197  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||  ||||||| || ||| | |||||| ||||||| ||||||||||||| |||||    
T  658 ttggtccttttaatttgatagaattttcaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctt 559  T
Q  198 taaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||||||||||||||| |||||||||||| |||||  ||||| |||||    
T  558 taaatttcaaaagtttcaaataggtcattttagttgataaactatttcactgtt 505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 470 - 406
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||||||| |||||||||||||||| || | ||| |||||||||||||| ||||| ||||    
T  470 atgtagccgttaagttgttgacttggatcacaatgttgccttttaaaagctccatggtgtaaaaa 406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 86 - 405
Target Start/End: Complemental strand, 11871886 - 11871557
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||  ||||| ||||||||  ||| ||| || ||  | || ||||||||||| |||||||    
T  11871886 caaatactatgtttggtccttttagtttgacagaatttccaagccagtccgttaagttttgaaactttcaattatgtcctcttagtttgacagaattctc 11871787  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatatta 276  Q
     ||||| |||||||| |||||||||||| ||||| |||||||||||| |||||| ||||         | ||| |   ||||||||||||| ||||  |     
T  11871786 gagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgataaattatttaaccgttacccctgctaccagttaataattaactgatgctg 11871687  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatc 375  Q
    |||||| ||||||||||||||||| |||||||| | ||  ||||||||||| ||||||||||||| ||||| || |||  |||||||| |||||| || |    
T  11871686 atgtagtcgttaaattgttgactttgatcaaaatggtggcttttaaaagcttcagggtgtcaaaacgttacgtttaatcgtcacaaatgatcattctagc 11871587  T
Q  376 actataaatgtcgtttaatagtgctagaaa 405  Q
    ||||||||||||||||||||||| ||||||    
T  11871586 actataaatgtcgtttaatagtggtagaaa 11871557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 97 - 364
Target Start/End: Complemental strand, 27893685 - 27893409
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| || ||| |||||||||||||||| ||||| ||||||| ||||    
T  27893685 tttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcccaagttagtcct 27893586  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatattaatgtagccgtt 287  Q
    |||| ||||||||||||||||||  ||||||||||| |||||  ||||         | ||||||| |||      |||| |||| || |||||||||||    
T  27893585 ttaagtttcaaaagtttcaaatagatcattttagttgataaactatttcatcgttaaccctgttgtcagtctccgtttaactgatgttgatgtagccgtt 27893486  T
Q  288 aaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||||||||||||||||||| | |||  |||||||| || ||| |||||||||| ||| |  |||| ||||||||    
T  27893485 aaattgttgacttggatcaaaatgttgccatttaaaaggtcgaggatgtcaaaatgctacgtgtaatggtcacaaat 27893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 30907136 - 30907253
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||| || ||||    
T  30907136 ggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcattta 30907235  T
Q  200 aatttcaaaagtttcaaa 217  Q
    | ||||||||||||||||    
T  30907236 agtttcaaaagtttcaaa 30907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 30907061 - 30907195
Alignment:
Q  84 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 183  Q
    |||||||| ||| ||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||| || ||| | ||||||||||||||||||||    
T  30907061 gccaaatatcatttttggtc-ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattc 30907159  T
Q  184 tcaagttaatcctttaaatttcaaaagtttcaaata 219  Q
    |||||||| |||||||| ||||||||||||||||||    
T  30907160 tcaagttagtcctttaagtttcaaaagtttcaaata 30907195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 158 - 407
Target Start/End: Original strand, 20535502 - 20535762
Alignment:
Q  158 tagattcttttagtttgacataattctcaagttaatcctttaaa-tttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt----- 251  Q
    ||||| |||||||||| |||||||| |||||||| || |||||| ||||||| |||||||||| |||||||||||| |||||  ||||| | |||         
T  20535502 tagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagttgataaactatttcaccgttatccc 20535601  T
Q  252 ----gtgagttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttac 347  Q
        || ||||||||||||| |||| || ||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |  |||||||||||||||    
T  20535602 tgctgtcagttaataattaactgatgttgatgtagccgttaagttgttgacttggatcaaaacgttgccttttaaaagctcaaaagtgtcaaaatgttac 20535701  T
Q  348 attcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
     || |||  |||||||| | |||| || || ||||||||   |||||||||| ||||||||    
T  20535702 gtttaatcgtcacaaatgaccattctagcattataaatgcattttaatagtgttagaaaga 20535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 31263924 - 31264046
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| || ||| | |||||||||||||| ||||||||||||| ||||    
T  31263924 tttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcct 31264023  T
Q  197 ttaaatttcaaaagtttcaaata 219  Q
    |||| ||||||||||||||||||    
T  31264024 ttaagtttcaaaagtttcaaata 31264046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 30907453 - 30907308
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattctttta-gtttgacataat 181  Q
    ||||||||||||  |||  ||||||||||||||||||||||  ||||||||| |||||||||| ||||||| || ||| | |||||| |||||| | |||    
T  30907453 ggccaaataccacttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaat 30907354  T
Q  182 tctcaagttaatcctttaaatttcaaaagtttcaaataagtcattt 227  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||    
T  30907353 tctcaagttagtcctttaagtttcaaaagtttcaaataagtcattt 30907308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 94 - 405
Target Start/End: Complemental strand, 39301951 - 39301639
Alignment:
Q  94 atgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaat 193  Q
    ||||| |||||||||||||||| | |||||| ||||||||||||||| ||| ||||||||||| || ||  ||||||||||||| |||| | |||||| |    
T  39301951 atgttcggtccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaattaaatctttttagtttgacagaatttttaagttatt 39301852  T
Q  194 cctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtgagttaataattaattgatattaatgtagcc 284  Q
     ||||||         |||||||||| | |||||||||| |||||  ||||| |||||         || ||||||||||||| | |  || | |||||     
T  39301851 tctttaa---------gtttcaaataggccattttagttgataaactatttcactgttactactgttgtcagttaataattaactaacgttgacgtagct 39301761  T
Q  285 gttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaa 383  Q
     |||||||| ||||||||||||||||| ||  |||||||||||||| ||||||||||  |||| || |||  ||| |||| |||||| || |||||||||    
T  39301760 attaaattggtgacttggatcaaaacgttgtcttttaaaagctccatggtgtcaaaactttacgtttaattgtcagaaatgatcattctaacactataaa 39301661  T
Q  384 tgtcgtttaatagtgctagaaa 405  Q
    ||||||||||||||||||||||    
T  39301660 tgtcgtttaatagtgctagaaa 39301639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 405
Target Start/End: Complemental strand, 15506562 - 15506311
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc---------tctgttgtg 254  Q
    ||||| |||| ||| ||||||||| ||| |  ||||||||| |||||||| ||||| ||| |||||||| |||||  |||||         |||| |||     
T  15506562 cttttggtttaacagaattctcaatttagttatttaaattttaaaagttttaaatatgtccttttagttgataaactatttcaccattatctctgctgtc 15506463  T
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    | ||||||||||| |||| || |||||||||||||||||||||||| ||||||||| ||   |||||||| ||||||||||||||||| |||| || |||    
T  15506462 aattaataattaactgatgttgatgtagccgttaaattgttgactttgatcaaaacactatgttttaaaatctccagggtgtcaaaatattacgtttaat 15506363  T
Q  355 gatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaa 405  Q
      |||||||| |||||| || ||||||||||| ||||||||||||| |||||    
T  15506362 tgtcacaaatgatcattctagcactataaatgccgtttaatagtgcaagaaa 15506311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 16781174 - 16781054
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 195  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| ||||||  |||||||||| ||| | |||||||||||||| ||||| ||||||| |||    
T  16781174 tttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttagtcc 16781075  T
Q  196 tttaaatttcaaaagtttcaa 216  Q
    |||||||||||||||||||||    
T  16781074 tttaaatttcaaaagtttcaa 16781054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 34336023 - 34336175
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||  |||| |||||||||||||| ||||||||||| ||||||||||||||||  ||||||| || ||  |  ||||||||||||| ||||| |    
T  34336023 caaataccacttttgatccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaattccc 34336122  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||| |||||||| |||||||||||| ||||| ||| |||||||| |||||    
T  34336123 aagttagtcctttaagtttcaaaagttttaaataggtctttttagttaataaa 34336175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 86 - 315
Target Start/End: Original strand, 27893023 - 27893252
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||| |||||||| |||| ||||||| || || ||  |||||||||||||  |||| |    
T  27893023 caaataccacgtttggtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattccc 27893122  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatatta 276  Q
    |||||| ||||||         |||||||||||| ||| |||||||| |||||  ||||         ||||| ||| ||||||||||||||||||  |     
T  27893123 aagttagtccttt---------aagtttcaaataggtctttttagttgataaactatttcaacgttacctctgctgtcagttaataattaattgatgatg 27893213  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgc 315  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  27893214 atgtagccgttaagttgttgacttagatcaaaacgctgc 27893252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 36196626 - 36196487
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||| || ||| |  ||||||||||||| ||||  ||||||| || |    
T  36196626 tttggtccttttagtttgacaa--ttttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagtcat 36196529  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    || | |||||||||||||||||| |||||||||||| |||||    
T  36196528 ttgagtttcaaaagtttcaaataggtcattttagttgataaa 36196487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 100 - 208
Target Start/End: Original strand, 31263987 - 31264095
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||| |||||||  ||||||| ||||| ||||||| | |||||    
T  31263987 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtacttta 31264086  T
Q  200 aatttcaaa 208  Q
    | |||||||    
T  31264087 agtttcaaa 31264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 34336398 - 34336262
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| |||| |||| |||||||||||| |||| ||||||| |  ||  | |||||| ||||||| ||||||||| ||| | ||    
T  34336398 tttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttgacaaaattctcaaattagttct 34336299  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||||||||||| || ||||||    
T  34336298 ttaaatttcaaaagtttcaaataagtccttgtagttt 34336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 37543218 - 37543101
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||  ||||||| || ||  | |||||||||||||||||||    
T  37543218 ggccaaataccatttttggttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataatt 37543119  T
Q  183 ctcaagttaatcctttaa 200  Q
      |||| || ||||||||    
T  37543118 tccaaggtagtcctttaa 37543101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 8260392 - 8260506
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||||||| ||| |||| |||| ||||||||||||||||| ||||||| || |||||  ||||||||||||| | ||||||| ||| || ||||| |||    
T  8260392 ttttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactcttttaatttt 8260491  T
Q  205 caaaagtttcaaata 219  Q
    |||||||||||||||    
T  8260492 caaaagtttcaaata 8260506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 42117282 - 42117196
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||| |||||||||||||||||| || || ||  ||||||||||||||||||||||||||||||||||| | |||||||||    
T  42117282 caaataccatttttggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 42117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 31264285 - 31264142
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagtta--gtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatc 194  Q
    |||| |||||||||||||||| ||||| |||||||  || ||||||||||| ||||||| || ||  | |||||||||||||| ||||  ||||||| |     
T  31264285 tttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtttgacagaatttccaagttagtt 31264186  T
Q  195 ctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
     ||||| |||||||||||||||||| ||| |||||||| |||||    
T  31264185 atttaagtttcaaaagtttcaaataggtccttttagttgataaa 31264142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 34336334 - 34336226
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 200  Q
    ||||||||| |||||||||||| |||| ||||| |||||| |||||||||||| |||||  | ||| |||||||||| |||| ||||||||||| |||||    
T  34336334 gtccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagtttcaaataagtccttgtagtttgacagaattttcaagttaatcttttaa 34336235  T
Q  201 atttcaaaa 209  Q
     ||||||||    
T  34336234 gtttcaaaa 34336226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 210
Target Start/End: Original strand, 34429681 - 34429793
Alignment:
Q  98 ttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 197  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||| ||| ||| || ||| | |||||| ||||| | ||||  |||||||||||||    
T  34429681 ttggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatcctt 34429780  T
Q  198 taaatttcaaaag 210  Q
    ||| |||||||||    
T  34429781 taagtttcaaaag 34429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 32341459 - 32341564
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaat 202  Q
    |||||||||||| | ||||||||| |||||||||| |||||| |||| ||| |||||| |||||||| ||||||| ||||||||| ||| |||| |||||    
T  32341459 cttttagtttgaaagaattttcaaattagtccttttaagttttaaaaatttcaaataggttcttttattttgacagaattctcaatttagtcctataaat 32341558  T
Q  203 ttcaaa 208  Q
    ||||||    
T  32341559 ttcaaa 32341564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 41265369 - 41265258
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||| |||||||||||||| | |||| ||||||||||| |||||||||| ||||||| || ||  | || ||| ||||||| ||||||||||||| ||||    
T  41265369 tttgatccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcct 41265270  T
Q  197 ttaaatttcaaa 208  Q
    |||| |||||||    
T  41265269 ttaagtttcaaa 41265258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 19080617 - 19080769
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||| ||||||| |||||||| |||| ||||    | ||| ||||||||||||  ||||||| || ||| |  ||||||||||||| |||| ||    
T  19080617 caaataccatttttggtcattttagttcgacagaattccttaattaatcctttaagttttgaaagtttcaattaggtcattttagtttgacagaattttc 19080716  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||  | ||||| |||||||||||||| ||| ||| |||||||| |||||    
T  19080717 aagttagacatttaagtttcaaaagtttcatataggtccttttagttgataaa 19080769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 19080804 - 19080904
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaa 363  Q
    ||||||||| || ||||| ||||||| |||||||| ||||||||||  |||  |||||||||||| |||||||||||||| ||  || ||||||||||||    
T  19080804 ttaattgatgttgatgtaaccgttaagttgttgacatggatcaaaatactgtcttttaaaagctcgagggtgtcaaaatgctatgtttaatgatcacaaa 19080903  T
Q  364 t 364  Q
    |    
T  19080904 t 19080904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 364
Target Start/End: Complemental strand, 36196436 - 36196352
Alignment:
Q  280 tagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||| ||| |||||||||||| | ||| || |||| ||||||||    
T  36196436 tagccgttaagttgttgacttggatcaaaatgctgccttttaaaaactcgagggtgtcaaaacgctacgtttaatggtcacaaat 36196352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 20536046 - 20535967
Alignment:
Q  129 ttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaa 208  Q
    ||||||||||||||| | |||||||||| || ||  ||||||||||||||||||||||||||| || ||||| |||||||    
T  20536046 ttagtcctttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagtcttttaagtttcaaa 20535967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 37542948 - 37543057
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||| ||||||||| || || |||||||||| |||||||||| |||||||||| ||  |  ||||||||||||||||||  ||||||| ||||    
T  37542948 tttggtccttt-agtttgacagaactt-caagttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcct 37543045  T
Q  197 ttaaatttcaaa 208  Q
    |||| |||||||    
T  37543046 ttaagtttcaaa 37543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 15506052 - 15506126
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||| ||| | ||||||||| || |||||    
T  15506052 cttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaa 15506126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 21813191 - 21813257
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 149  Q
    ||||||||||||  ||| ||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  21813191 ggccaaataccacttttagtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 39376159 - 39376283
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||| ||| ||| ||||||||| ||| |||| ||||||| |||||| ||||||  ||||||| || ||||| |||||||||| ||  ||||    
T  39376159 ggccaaataccattttttgtcattttagtttaacataattctcaagttggtccttcaagttttgaaagtttcaactagatccttttagttttacggaatt 39376258  T
Q  183 ctcaagttaatcctttaaatttcaaa 208  Q
    |  |||||| | ||||||||||||||    
T  39376259 cctaagttagt-ctttaaatttcaaa 39376283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 39376456 - 39376351
Alignment:
Q  112 ttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagt 211  Q
    |||||| ||||| |||||||||||||||||||||||| |||| |||||| |  ||||| ||||||| | |||  |||||| |||||||  ||||||||||    
T  39376456 ttgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttttaatttgacaaatttcctaagttagtcctttatgtttcaaaagt 39376357  T
Q  212 ttcaaa 217  Q
     |||||    
T  39376356 ctcaaa 39376351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 5116907 - 5116955
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5116907 ggtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaa 5116955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 30907079 - 30907149
Alignment:
Q  163 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||| ||||||||||||| || ||||| |||| |||||||||| || ||| |||||||||    
T  30907079 tcttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagttt 30907149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 13315865 - 13315808
Alignment:
Q  84 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaag 141  Q
    |||||| ||||| |||| |||||||||||||||| ||||| |||||||||||||||||    
T  13315865 gccaaagaccatttttgatccttttagtttgacataatttccaagttagtcctttaag 13315808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 15506048 - 15506105
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaa 157  Q
    |||||||||||||||||| |||| |||| ||| |||||||||||| ||||||||||||    
T  15506048 ggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaa 15506105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 16780928 - 16780989
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||  |||| |||||||| || |||| ||||||||||||||||||||||||||||||    
T  16780928 aaataccacttttgatccttttaattcgacagaattttcaagttagtcctttaagtttcaaa 16780989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 34429687 - 34429752
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 229  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||| |||||| || ||| |||||    
T  34429687 cttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtcctttta 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 31263932 - 31264000
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||| ||||  |||||||||||||||| |||| |||||||||| || ||| |||||||||    
T  31263932 ttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagttt 31264000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 32341397 - 32341468
Alignment:
Q  162 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||  ||||| |||||||||||||||||||| ||| ||| || |||||  |||||||||    
T  32341397 ttcttttagtttgacaggattcttaagttaatcctttaaatttcgaaaatttgaattaagttcttttagttt 32341468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 37543199 - 37543128
Alignment:
Q  162 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||| |||| |||||||| || ||||| |||  |||||||||| |||||| |||||||||    
T  37543199 ttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagttt 37543128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 407
Target Start/End: Complemental strand, 19081057 - 19080950
Alignment:
Q  299 ttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagt 397  Q
    ||||||||||||| ||| ||| |||  || ||||||||||||| |||||||| |||  |||| | | |||||| || ||||||||||| |||||||||||    
T  19081057 ttggatcaaaacgttgcctttaaaa--ctgcagggtgtcaaaacgttacatttaatcgtcacgactgatcattctaacactataaatgacgtttaatagt 19080960  T
Q  398 gctagaaaga 407  Q
    | ||||||||    
T  19080959 ggtagaaaga 19080950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 20535487 - 20535565
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatag 160  Q
    |||||||||||| ||| | |||||||||||| ||| |||| ||||||||||| ||| |||||||||| |||| ||||||    
T  20535487 ggccaaataccacgttagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaatag 20535565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 27893273 - 27893363
Alignment:
Q  318 tttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    ||||||||||||||||||| |  | ||||| || |||  |||||||| |||||| ||  | ||||||||||||||||||||||||||||||    
T  27893273 tttaaaagctccagggtgttaggacgttacgtttaatcgtcacaaatgatcattctagaattataaatgtcgtttaatagtgctagaaaga 27893363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 20535908 - 20535831
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||| |||| || ||||||||||||| || |||||||||||||||| |  || |||||||||||| ||||||| ||||    
T  20535908 ttaactgatgttgatgtagccgttaagttattgacttggatcaaaatgtagccttttaaaagctcgagggtgttaaaa 20535831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 32341378 - 32341515
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| ||  |||||| ||||||||||||||  ||| | |||||| |||||||| |||| ||| ||| || ||  |||||||||||||| | ||||    
T  32341378 ggccaaatatcacttttggttcttttagtttgacaggattcttaagttaatcctttaaatttcgaaaatttgaattaagttcttttagtttgaaagaatt 32341477  T
Q  183 ctcaagttaatcc-tttaaatttcaaaagtttcaaata 219  Q
     |||| ||| ||| ||||| ||| |||| |||||||||    
T  32341478 ttcaaattagtccttttaagttttaaaaatttcaaata 32341515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 1106516 - 1106568
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    |||||||||||||||||||| |||| ||||| ||||||||| | |||||||||    
T  1106516 tcctttaaatttcaaaagttgcaaacaagtccttttagtttttgaatcatttc 1106568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 8260392 - 8260460
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||| ||| ||||||||| ||| |||||||| |||| |||||||||| ||  ||||||||||||    
T  8260392 ttttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagttt 8260460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 8396795 - 8396743
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    |||||||| |||||||||| ||||| ||||||||||||||| | |||||||||    
T  8396795 tcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcatttc 8396743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 39301381 - 39301444
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattctt 166  Q
    |||||||||||| ||| |||| ||||||||||||||||| ||||| || |||||||||| |||||    
T  39301381 tccttttagtttcacataattatcaagttagtcctttaa-tttcataaattttaaataggttctt 39301444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 20536010 - 20535967
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||    
T  20536010 ttttagtttgacataattctcaagttagtcttttaagtttcaaa 20535967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 41265108 - 41265155
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagttt 144  Q
    ||||||| ||||||||||||| |||||||||||||||| ||| |||||    
T  41265108 tttggtcattttagtttgacataattttcaagttagtctttttagttt 41265155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 3430870 - 3430828
Alignment:
Q  191 aatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||| ||||||||||| |||| |||||||||||||||    
T  3430870 aatcctttaagtttcaaaagttccaaacaagtcattttagttt 3430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 34253041 - 34253091
Alignment:
Q  195 ctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    ||||||||||||||||| ||||| ||||| ||||||||| |||||| ||||    
T  34253041 ctttaaatttcaaaagtctcaaacaagtccttttagtttttaaatcgtttc 34253091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 5116963 - 5117008
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaag 150  Q
    ||||||||||||||||||  ||||||| |||||||| |||||||||    
T  5116963 ttttagtttgacaaaattcacaagttactcctttaactttcaaaag 5117008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 5116963 - 5117008
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaag 210  Q
    ||||||||||||| ||||| ||||||| |||||||| |||||||||    
T  5116963 ttttagtttgacaaaattcacaagttactcctttaactttcaaaag 5117008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 19081124 - 19081055
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttg 174  Q
    ||||||||||||| |||| |||| |||||| |||||||||| ||||||| || ||| |  ||||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtttg 19081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 21813212 - 21813257
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaa 209  Q
    |||||||||||| | ||||||||||||| |||||||| ||||||||    
T  21813212 cttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 15505943 - 15505999
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtt 143  Q
    |||||| || |||||| |||||||||||||| |||||| || ||| |||||||||||    
T  15505943 aaatactatttttggttcttttagtttgacagaatttttaaattactcctttaagtt 15505999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 19081124 - 19081056
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||| ||||||||| ||| || ||||| |||| |||||||||| || ||  |||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagttt 19081056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 37543140 - 37543100
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaag 141  Q
    ||||||||||||||||| ||||| |||| ||||||||||||    
T  37543140 gtccttttagtttgacataatttccaaggtagtcctttaag 37543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 42117242 - 42117190
Alignment:
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||| |||||||| |||||||||||| ||||| ||| |||||||| |||||    
T  42117242 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 42117190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 45124315 - 45124263
Alignment:
Q  121 ttttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagttt 173  Q
    |||||||  |||||||||||||||||||||| | ||| | |||||||||||||    
T  45124315 ttttcaaagtagtcctttaagtttcaaaagtctcaaacaaattcttttagttt 45124263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 9e-49; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 49651096 - 49650844
Alignment:
Q  126 aagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcat 225  Q
    |||||||||||| ||||||| ||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||         |||||||||| |||      
T  49651096 aagttagtccttcaagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaa---------gtttcaaataggtccc 49651006  T
Q  226 tttagtttataaatcatttctctgttgtgagt--taataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaa 323  Q
    ||||||| |||||  ||||| |||||     |  ||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||| |||||||    
T  49651005 tttagttgataaactatttcactgttacccctgctaataattaattgatgttgatgtagtcgttaagttgttgacttggatcaaaacgctgccttttaaa 49650906  T
Q  324 agctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatcactataaatg 385  Q
    | |||||||||||||||||| ||| || |||| ||||||||||||||||| || ||||||||    
T  49650905 atctccagggtgtcaaaatgctacgtttaatggtcacaaatatcattttagcattataaatg 49650844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 87 - 364
Target Start/End: Original strand, 27351041 - 27351330
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    |||||||| |||||||| ||||| ||||||| ||||  ||||||||||||||||||||| ||||||| || ||  | |||||||||||||||||||||||    
T  27351041 aaataccacgtttggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctca 27351140  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatattaa 277  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||| |||||  ||||         | ||| ||| ||||||||||||| |||| || |    
T  27351141 agttagtcctttaagtttcaaaagtatcaaataagtcattttagttgataaactatttcaccgttacccctgctgtcagttaataattaactgatgttga 27351240  T
Q  278 tgtagccgttaa---attgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    | ||||||||||    ||||||||||| ||||||| | ||| ||||||||| | ||||||||||||| ||||| || |||  ||||||||    
T  27351241 tatagccgttaagtttttgttgacttgaatcaaaatgttgccttttaaaagatacagggtgtcaaaacgttacgtttaatcgtcacaaat 27351330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 34254485 - 34254621
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||| ||||||| |||||||||||||||| |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  34254485 ggccaaatacaatgtttgttccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaatt 34254584  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaata 219  Q
    |  |||| | |||||||| ||||||||||||||||||    
T  34254585 cctaagtcagtcctttaagtttcaaaagtttcaaata 34254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 131 - 407
Target Start/End: Original strand, 8902795 - 8903081
Alignment:
Q  131 agtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttag 230  Q
    ||||||| ||||||| ||||||| || ||  |  ||||||||||||| ||||| ||||||| |||||||| |||||||||||| ||||||||| ||||||    
T  8902795 agtccttgaagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttag 8902894  T
Q  231 tttataaatcatttctctgtt---------gtgagttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcatttta 321  Q
    || |||||| ||||| |||||         ||   ||||||||||| ||||  | ||||||||||||| ||||||||||||||||||||| ||| |||||    
T  8902895 ttgataaattatttcactgttacccctgttgtcgattaataattaactgatgctgatgtagccgttaagttgttgacttggatcaaaacgatgcctttta 8902994  T
Q  322 aaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    |||||||||  ||||||||| ||||| || |||  |||||| | |||||| || || |||| |||||||| ||||||| ||||||||    
T  8902995 aaagctccaccgtgtcaaaacgttacgtttaatcgtcacaagtgatcattctagcattatatatgtcgttgaatagtgttagaaaga 8903081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 44964211 - 44964062
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||| |||| ||||||||||| ||||||||| ||||||||||| |||||||||| ||||||| || |||||  ||||||||||||| ||||    
T  44964211 ggccaaataccatttttgatccttttagttagacaaaattctcaagttagtc-tttaagtttcgaaagtttcaattagatcattttagtttgacagaatt 44964113  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||| |||||||| ||| |||||||||||||| ||| |||||||||    
T  44964112 ctcaagttattcctttaagttttaaaagtttcaaataggtccttttagttt 44964062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 255 - 406
Target Start/End: Complemental strand, 34254971 - 34254821
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    ||||||||||||||||||  | |  |||||||||| ||||||||||| ||||||||||||  ||||||||||| |||| |||||||| ||||| || |||    
T  34254971 agttaataattaattgatgctgaaatagccgttaagttgttgacttgtatcaaaacgctgtcttttaaaagcttcagg-tgtcaaaacgttacgtttaat 34254873  T
Q  355 gatcacaaatatcattttatcactataaatgtcgtttaatagtgctagaaag 406  Q
    | ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34254872 ggtcacaaatatcattttggcactataaatgtcgtttaatagtgctagaaag 34254821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 84 - 302
Target Start/End: Complemental strand, 48352879 - 48352652
Alignment:
Q  84 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 183  Q
    |||||||||||  ||||||||||||||||||||| ||||  | |||||||| |||||||||| |||| || || ||| |   ||||||||||||||||||    
T  48352879 gccaaataccacttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattc 48352780  T
Q  184 tcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgt---------tgtgagttaataattaattgatat 274  Q
     ||||||| |||||||| |||||||||||| ||||| |||||||||||| |||||  ||||| ||||         ||| ||||||||||||| |||||     
T  48352779 ccaagttagtcctttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttacccttgctgtcagttaataattaactgatac 48352680  T
Q  275 taatgtagccgttaaattgttgacttgg 302  Q
     |||||||||||||| || |||||||||    
T  48352679 caatgtagccgttaagttattgacttgg 48352652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 10686838 - 10686697
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |  ||| | |||||| ||  ||| ||||||||||||| || |    
T  10686838 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagtcat 10686739  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||| ||| |||||||||||||| |||||||||||| |||||    
T  10686738 ttaagttttaaaagtttcaaataggtcattttagttgataaa 10686697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 44964130 - 44964018
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||||||||||| |||| |||||||| |||||||||||| |||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||||||    
T  44964130 ttttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaaattt 44964031  T
Q  205 caaaagtttcaaa 217  Q
     ||||||||||||    
T  44964030 taaaagtttcaaa 44964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 17898983 - 17898836
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||  |||||||||||||||||||||  ||| |||| ||||| |||||||||| |||| ||| || ||| | |||||||||||| | ||||| |    
T  17898983 caaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttgatagaattcac 17898884  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    || ||| |||||||| ||||||||||||||||||||||||||||||||    
T  17898883 aaattagtcctttaagtttcaaaagtttcaaataagtcattttagttt 17898836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 277 - 405
Target Start/End: Complemental strand, 29418980 - 29418851
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatc 375  Q
    ||||||||||||| |||||||||||||||||||  |||  |||||||| |||||||||||||| | ||||| || ||| ||||||||| |||||| || |    
T  29418980 atgtagccgttaagttgttgacttggatcaaaatactgtcttttaaaaactccagggtgtcaacacgttacgtttaatcatcacaaataatcattataac 29418881  T
Q  376 actataaatgtcgtttaatagtgctagaaa 405  Q
    ||||||||||||||||||||||| ||||||    
T  29418880 actataaatgtcgtttaatagtgatagaaa 29418851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 11897831 - 11897945
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||  ||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||| || ||| | |||||||||||||| ||||| |    
T  11897831 caaataccacttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattccc 11897930  T
Q  186 aagttaatcctttaa 200  Q
    |||||||||||||||    
T  11897931 aagttaatcctttaa 11897945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 364
Target Start/End: Complemental strand, 39302826 - 39302546
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| ||| |||||||| || || ||  ||||||||| ||| ||||    
T  39302826 ggccaaataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaactatatcgttttagtttaacaaaatt 39302727  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgt---------tgtgagttaataattaattgata 273  Q
     |||||||| |||      ||||||| ||||||||||  |  |||||||| |||||| ||||| ||||         | | ||||||||| ||| ||||     
T  39302726 ttcaagttactcc------tttcaaatgtttcaaatagcttcttttagttgataaattatttcactgttagccatgctatcagttaataactaactgatg 39302633  T
Q  274 ttaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
       ||||||||||||| ||||||||||||||    ||| ||  ||||||||||| |||||||||||||||| || || |||| ||||||||    
T  39302632 cagatgtagccgttaagttgttgacttggat----acgttgtcttttaaaagcttcagggtgtcaaaatgtcacgtttaatggtcacaaat 39302546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 29419173 - 29419027
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| ||||| |||||||||| || ||||||| ||||||| || ||| | |||||||||||||| |||||  || ||| || |    
T  29419173 tttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaattccaaaattagtctt 29419074  T
Q  197 ttaaatttcaaaagtttcaa----ataagtcattttagtttataaat 239  Q
    |||| |||||||||||||||    |||||||||||||||| ||||||    
T  29419073 ttaagtttcaaaagtttcaaataaataagtcattttagttgataaat 29419027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 1766044 - 1765916
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||| ||||||| |||| ||||||||||| ||||| |||||||||||| || ||  |  ||||||||||||| || ||||| |||| ||||||||  ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  205 caaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||||||||||||||    
T  1765944 caaaagtttcaaataagtcattttagttt 1765916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 17898909 - 17898794
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||||||||||||||| | ||||  ||| ||||||||||||||||||||||||| |||||  |  ||||||||||||| |||| |||| ||| |||||||    
T  17898909 ggtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtccttta 17898810  T
Q  200 aatttcaaaagtttca 215  Q
    ||||||||||||||||    
T  17898809 aatttcaaaagtttca 17898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 10686363 - 10686516
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    ||||||||||||| ||||  | ||||||||||||| ||||||||||| |||||||   ||| ||||||||||||  |||||||||||  |||| || |||    
T  10686363 agttaataattaactgatgctgatgtagccgttaagttgttgacttgtatcaaaatattgccttttaaaagctctggggtgtcaaaacattacgtttaat 10686462  T
Q  355 gatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
      |||||||| |||||| || ||||||||||| |||||||| ||||||||||||    
T  10686463 cgtcacaaatgatcattctagcactataaatgccgtttaatcgtgctagaaaga 10686516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 10685848 - 10685959
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| || |||| || ||  |  ||||||||||||| ||||  ||||||| ||||    
T  10685848 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtcct 10685947  T
Q  197 ttaaatttcaaa 208  Q
    |||| |||||||    
T  10685948 ttaagtttcaaa 10685959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 8903335 - 8903249
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||  ||||| ||||| |||||    
T  8903335 ttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttcactgtt 8903249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 35701450 - 35701553
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||||||| ||| |||||| |||||| |  ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||    
T  35701450 ttttagtttaacagaatttttaagttaatt-tttaaatttcaaaagttttaaataaattcttttaatttgacataattctcaagttagtcttttaaattt 35701548  T
Q  205 caaaa 209  Q
     ||||    
T  35701549 taaaa 35701553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 49650564 - 49650674
Alignment:
Q  88 aataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa 187  Q
    |||||||| |||  |||||||||||||||| |||| ||||||||||||||||| |||  ||| ||| || ||| | |||||||||||||| |||||||||    
T  49650564 aataccattttttatccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaa 49650663  T
Q  188 gttaatccttt 198  Q
    |||| ||||||    
T  49650664 gttagtccttt 49650674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 407
Target Start/End: Original strand, 4772268 - 4772412
Alignment:
Q  263 attaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaa 362  Q
    ||||||||||  | ||||| || |||| ||||||||||||||| |||| |||| ||||||||||| |  |||||||||| ||||| || |||| ||||||    
T  4772268 attaattgatgatgatgtaaccattaagttgttgacttggatcgaaactctgccttttaaaagcttc-tggtgtcaaaacgttacgtttaatggtcacaa 4772366  T
Q  363 at-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    || |||||| || || | ||||||| ||||||||||||||||||||    
T  4772367 atgatcattctagcattgtaaatgttgtttaatagtgctagaaaga 4772412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 405
Target Start/End: Original strand, 4030310 - 4030560
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttt-agttt---ataaatcatttct----ctgttgtga 255  Q
    |||||||||||||| |||||| ||||||||||||||| |||| |||||||||| || ||| |||| |||||   | || ||| |  |    ||||||| |    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattcactgttacccctgttgtta 4030409  T
Q  256 gttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatg 355  Q
    ||||||||| || ||||  | || ||||| |||| |||||||||| ||||||||| |||| ||||||||| |||| | |||  ||| ||||| || |||     
T  4030410 gttaataatcaactgatgctgatctagccattaagttgttgactttgatcaaaacactgccttttaaaagttccatgatgtagaaacgttacgtttaatc 4030509  T
Q  356 atcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaa 405  Q
     |||| ||| |||||| || |||||||||||  ||||||||||||||||||    
T  4030510 gtcaccaatgatcattctaccactataaatgctgtttaatagtgctagaaa 4030560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 8902829 - 8902896
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||  | |||||||||    
T  8902829 ttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagtt 8902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 1765763 - 1765828
Alignment:
Q  107 ttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||| |||||  || |||||||||||||||||||||||||||||||||| |||||||||    
T  1765763 ttagtttgacataatttctaaattagtcctttaagtttcaaaagttttaaatagatccttttagtt 1765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 1765984 - 1765881
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||||||||||| || | ||| |||||||||||||| ||||||||||| |||||  |  ||||||||||||| ||||  ||||||| |||||||| |||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtttgacagaatttccaagttactcctttaagttt 1765885  T
Q  205 caaa 208  Q
    ||||    
T  1765884 caaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 2965480 - 2965553
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||||||||  ||| ||| ||||||||||||  |||||||||||||  ||||||||||||||||||||||||||    
T  2965480 caaataccaatttttgtctttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaata 2965553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 4772161 - 4772222
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    |||||||| ||| |||||||||||||||||||||||  |||| |||||||||||||||||||    
T  4772161 aaataccacgttaggtccttttagtttgacaaaattcacaaggtagtcctttaagtttcaaa 4772222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 8903357 - 8903268
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||||||||| |  ||||||| ||||||||||||| |||| |||||||| ||||||||||||| ||||||| ||||| ||  ||||||||    
T  8903357 ggccaaatactacttttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagtt 8903268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 364
Target Start/End: Complemental strand, 27351501 - 27351392
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    ||||||||||||| ||||  | ||||||||||||| |||||||||| |||||||| | ||  |||||||||||| |||||||| ||||| ||  || |||    
T  27351501 agttaataattaagtgatgctgatgtagccgttaagttgttgactttgatcaaaatgttgttttttaaaagctctagggtgtcgaaatgctaattttaat 27351402  T
Q  355 gatcacaaat 364  Q
    | ||||||||    
T  27351401 ggtcacaaat 27351392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 49650580 - 49650649
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||| |||||| || ||| |||||||||    
T  49650580 cttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagttt 49650649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 4772698 - 4772650
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  4772698 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 4772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 27351659 - 27351548
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||| ||||||| |||| |||||||  | ||||||||||| |||||||||| ||  |  ||||| ||||| | ||||||||| ||| ||||    
T  27351659 tttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgttttattttgatagaattctcaaattagtcct 27351560  T
Q  197 ttaaatttcaaa 208  Q
    |||| |||||||    
T  27351559 ttaagtttcaaa 27351548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 2965499 - 2965572
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||||||  |||| ||||||||  ||||||| |||||||||||| ||||| |||||||||||| |||||    
T  2965499 ttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagttgataaa 2965572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 34254564 - 34254633
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagt 171  Q
    |||||||||||||||| ||||   |||| ||||||||||||||||||||||| ||||| || ||||||||    
T  34254564 tccttttagtttgacagaattcctaagtcagtcctttaagtttcaaaagtttcaaatatatgcttttagt 34254633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 35701400 - 35701504
Alignment:
Q  115 acaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttc 214  Q
    |||||||||| || ||| || |||||||||  |||||||||| |||||  ||||||||| ||| |||| | ||||||||  ||||||||||||||||||     
T  35701400 acaaaatttttaatttaatcttttaagttttgaaagttttaattagatctttttagtttaacagaatttttaagttaatt-tttaaatttcaaaagtttt 35701498  T
Q  215 aaataa 220  Q
    ||||||    
T  35701499 aaataa 35701504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 44964075 - 44964022
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||    
T  44964075 ggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagttt 44964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 49650754 - 49650839
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaa 362  Q
    ||||||||||||| ||||||| ||||||||||| | ||  ||||||||| | ||||||||||||| | ||| || |||||||||||    
T  49650754 atgtagccgttaagttgttgatttggatcaaaatgttgtcttttaaaagtttcagggtgtcaaaacgatacgtttaatgatcacaa 49650839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 4030310 - 4030390
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattc-ttttagtttgacataattc 183  Q
    ||||||||||||||||||| | |||||| ||||||||||||| ||||||| || ||| | | ||||||||||||| |||||    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattc 4030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 11897850 - 11897918
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||| ||||||||||||| || ||||| |||| |||||||||| || ||| |||||||||    
T  11897850 ttttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagttt 11897918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 364
Target Start/End: Original strand, 39302454 - 39302541
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||| |||| |||||||| || |||||||||| | ||| ||||||||||| ||||||||||||| | ||| || |||| ||||||||    
T  39302454 atgtaaccgtgaaattgttaacgtggatcaaaatgttgccttttaaaagcttcagggtgtcaaaacgctacgtttaatggtcacaaat 39302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 49651057 - 49651014
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  49651057 ttttagtttgacagaattctcaagttagtcctttaagtttcaaa 49651014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 44963903 - 44963961
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    ||||||||||||||| |  |||  ||| |||||||||||||||||||||||||||||||    
T  44963903 gtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttttaaata 44963961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 10685855 - 10685924
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| |||| |||||||| |||||||| |||| || ||||||| || ||| |||||||||    
T  10685855 cttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagttt 10685924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 34254506 - 34254575
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| ||||||||||||  ||||||||  ||||||||||| |||||  || |||||||||    
T  34254506 cttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagttt 34254575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 39302317 - 39302406
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||||  |||| | |||||||||||||| ||||  ||| ||| | |||||||||||||||||||  | ||| |||||||||||    
T  39302317 ggccaaataccacttttgtttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagtt 39302406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 8903210 - 8903150
Alignment:
Q  281 agccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||||||||| ||||||||||||| | ||| ||||||||| || ||||||| ||||    
T  8903210 agccgttaaattgttaacttggatcaaaatggtgccttttaaaagttcgagggtgtaaaaa 8903150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 26069789 - 26069829
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  26069789 tcctttaaatttcaaaagtctcaaacaagtcattttagttt 26069829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 39302336 - 39302388
Alignment:
Q  162 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttc 214  Q
    |||||||||||||||| ||||| ||| ||||| |||||| |||||||||||||    
T  39302336 ttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttc 39302388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 34254701 - 34254751
Alignment:
Q  291 ttgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||||||||||||||||||| ||||| ||||||||||| || ||||| ||||    
T  34254701 ttgttgacttggatcaaaatgctgccttttaaaagcttcatggtgttaaaa 34254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 364
Target Start/End: Original strand, 37663236 - 37663322
Alignment:
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||||| ||| |||||| |||||||||||| | ||  |||||||||||| | |||| ||||||| ||| || |||| ||||||||    
T  37663236 tgtagccgataagttgttgtcttggatcaaaatgttgtcttttaaaagctcgaaggtgacaaaatgctacgtttaatggtcacaaat 37663322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 44963847 - 44963961
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||||||||| | | || | |||| ||||||||||||||| ||||||| ||  |  | |||||||||||| |  |||| ||| ||| |||||||| |||    
T  44963847 ttttagtttgatagatttctaaagtaagtcctttaagtttcgaaagtttcaataaagtccttttagtttgataggattcccaaattagtcctttaagttt 44963946  T
Q  205 caaaagtttcaaata 219  Q
    ||||||||| |||||    
T  44963947 caaaagttttaaata 44963961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 4772594 - 4772517
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||| ||||||| ||||||| || || ||||||| || |||||||| | ||| |||||||||||  ||||||||||||    
T  4772594 ttaactgatattgatgtagctgtgaagttgttgatttagatcaaaatgttgccttttaaaagcttgagggtgtcaaaa 4772517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 27351652 - 27351603
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagttt 213  Q
    |||||| |||||||||||||||||||| || |||||| |||| |||||||    
T  27351652 cttttaatttgacataattctcaagttgatactttaagtttcgaaagttt 27351603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 48352389 - 48352442
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctcca 330  Q
    ||||||||||||| |||||||||||||| |||    ||||||||||||||||||    
T  48352389 atgtagccgttaagttgttgacttggattaaactaatgcattttaaaagctcca 48352442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 49094667 - 49094708
Alignment:
Q  192 atcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  49094667 atcctttaagtttcaaaagtctcaaacaagtcattttagttt 49094708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 23767658 - 23767618
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  23767658 tcctttaagtttcaaaagtctcaaataagtccttttagttt 23767618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 32373797 - 32373757
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  32373797 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 32373757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 36157635 - 36157675
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  36157635 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 36157675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 49974018 - 49973978
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||||||||| ||||| |||||||||    
T  49974018 tcctttaagtttcaaaagtttcaaacaagtccttttagttt 49973978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 88 - 364
Target Start/End: Original strand, 52181706 - 52181991
Alignment:
Q  88 aataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa 187  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||| |||||| |||  ||||||| ||  |  | |||||||||||||| ||||| |||    
T  52181706 aataccatttttgatccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaa 52181805  T
Q  188 gttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatattaat 278  Q
    |||| |||||||| |||||||||||||||| | ||||||||| || |||||  ||||         | ||| ||||| |||||||||||||||| || ||    
T  52181806 gttagtcctttaagtttcaaaagtttcaaacatgtcattttaattgataaactatttcaccgttaccgctgctgtgaattaataattaattgatgttgat 52181905  T
Q  279 gtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||| |||||| |||||||||| |||||||| | ||| ||||||||||||||||||||||||| | ||| || |||| ||||||||    
T  52181906 gtagtcgttaagttgttgactttgatcaaaatgttgccttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaat 52181991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 164 - 407
Target Start/End: Original strand, 52567750 - 52568001
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt---------gtg 254  Q
    |||||||||||||| |||||| |||||| || ||||| |||||||||||| ||||| |||||||||||| |||||  ||||| |||||         ||     
T  52567750 cttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttactcctgctgtc 52567849  T
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    |||||||||||||||||| || |||||| |||||| || ||| |||||||||||| | ||  |||||||| || ||||||||||||| ||||  || |||    
T  52567850 agttaataattaattgatgttgatgtagtcgttaagttattgtcttggatcaaaatgttgtcttttaaaaacttcagggtgtcaaaacgttatgtt-aat 52567948  T
Q  355 gatcacaaatatcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    | ||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  52567949 ggtcacaaatatcattttagcactataaatatcgttcaatagtgctagaaaga 52568001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 407
Target Start/End: Complemental strand, 30543254 - 30542942
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| ||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||         ||||||  |||||||||||||||| |||| ||    
T  30543254 caaatatcatgtttggtccttttaatttgacaaaatttccaaattaatcctttaagttt---------taaatattttcttttagtttgacaaaattatc 30543164  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgatatta 276  Q
    |||||| ||||||||||||||||         ||| |||||||| || |||||  ||||| |         |||||| |||||||||||||||||||||     
T  30543163 aagttagtcctttaaatttcaaa---------taaatcattttaattgataaactatttcaccgttacccctgttgtcagttaataattaattgatattg 30543073  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaatatcattttatca 376  Q
     || ||| ||||||||||||||||  ||||||||| ||  ||||||||||| || ||||||||||  |||| || |||| || |||||||||||||| ||    
T  30543072 ttggagctgttaaattgttgacttaaatcaaaacgttgacttttaaaagcttcatggtgtcaaaacattacgtttaatggtcgcaaatatcattttaaca 30542973  T
Q  377 ctataaatgtcgtttaatagtgctagaaaga 407  Q
    |||||||| |||||||||| |||||||||||    
T  30542972 ctataaatatcgtttaataatgctagaaaga 30542942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 26330066 - 26329930
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 201  Q
    |||||||||||| ||| ||||  ||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||| || |||||     
T  26330066 tccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcatttaag 26329967  T
Q  202 tttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||||||||||||||| |||||||||||| |||||    
T  26329966 tttcaaaagtttcaaataggtcattttagttgataaa 26329930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 43098546 - 43098399
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||| ||||||||||||||||||||| |||||  || ||||| ||||||||||| ||||||| || ||| | |||||||||||||| ||||| ||    
T  43098546 aaataccatttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattccca 43098447  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagttta 234  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  43098446 agttagtcctttaagtttcaaaagtttcaaatatgtcattttagttta 43098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 26330145 - 26329995
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||||||||  ||||||| || ||||| |||||||||| ||| ||||    
T  26330145 ggccaaataccacttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaatt 26330046  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    | ||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  26330045 cccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttt 26329995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 86 - 394
Target Start/End: Original strand, 8408340 - 8408649
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||         ||||| |||||||||||||| |||||||    
T  8408340 caaatatcaagtttggtccttttagtttgacaaaatttccaagttagttctttaagtttcaaa---------tagatccttttagtttgacaaaattctc 8408430  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt--------gtgagttaataattaattgatattaa 277  Q
    |||| | || ||||| ||| ||||||||||||||||||||||||||| ||||   ||||| | |||        || |||||||||||||   || || |    
T  8408431 aagtaagtcttttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcaccgttaacctacagtcagttaataattaaccaatgttga 8408530  T
Q  278 tgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagc-tccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatc 375  Q
     |||||| |||| ||||||||||| ||||||| | ||| ||||| |||| || | |||||||||| ||||  || |||| |||||||| |||||| || |    
T  8408531 ggtagcctttaagttgttgacttgaatcaaaatgttgccttttacaagcttcaaaggtgtcaaaacgttatgtttaatggtcacaaatgatcattctagc 8408630  T
Q  376 actataaatgtcgtttaat 394  Q
    |||||||||||| ||||||    
T  8408631 actataaatgtcatttaat 8408649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 19631749 - 19631859
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| || |||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||    
T  19631749 ggccaaatatcacgtttggtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatt 19631848  T
Q  183 ctcaagttaat 193  Q
    |||||||||||    
T  19631849 ctcaagttaat 19631859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 2789092 - 2788963
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 203  Q
    ||||||||||||||||||||| || ||||||||||||||||   |||||| || ||| |  ||||||||||||| |||| |||||||| |||||||| ||    
T  2789092 cttttagtttgacaaaatttttaaattagtcctttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtt 2788993  T
Q  204 tcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||| |||||||||||||    
T  2788992 tcaaaagtttcaaataggtcattttagttt 2788963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 9320017 - 9320142
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 203  Q
    ||||||||||||||||||| ||||||||||  |||||||||| ||||||| || ||  |||||||||||||||| ||||||||| ||| || ||||||||    
T  9320017 cttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatt 9320116  T
Q  204 tcaaaagtttcaaataagtcatttta 229  Q
    ||||||||||||||||  ||||||||    
T  9320117 tcaaaagtttcaaatagatcatttta 9320142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 405
Target Start/End: Original strand, 31229254 - 31229568
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 195  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||| ||||||| ||||||| |  ||| |  ||||||||||| | ||||||||||||| ||     
T  31229254 tttggtctttttaatttgacagaattttcaaattagtccttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtca 31229353  T
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcattt---------ctctgttgtgagttaataattaattgatattaatgtagccgt 286  Q
    ||||| |||||||||||||||||| ||  |||||||| |||||  ||||         ||||| ||| ||||||||||||||||||  | |||||| |||    
T  31229354 tttaagtttcaaaagtttcaaataggttcttttagttgataaactatttcaccgttacctctgctgtcagttaataattaattgatgctgatgtagtcgt 31229453  T
Q  287 taaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatg 385  Q
    ||| |||||   ||||| ||||| |||   |||||||| || ||||||| ||||| ||||| || |||  |||||||| |||||| || |||||||||||    
T  31229454 taacttgtt---ttggaccaaaatgctaacttttaaaa-ct-cagggtggcaaaacgttacgtttaatcgtcacaaatgatcattctagcactataaatg 31229548  T
Q  386 tcgtttaatagtgctagaaa 405  Q
    |||||||||| |||||||||    
T  31229549 tcgtttaataatgctagaaa 31229568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 2789036 - 2788928
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||| ||||||||||||| || ||||    
T  2789036 ggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcattta 2788937  T
Q  200 aatttcaaa 208  Q
    | |||||||    
T  2788936 agtttcaaa 2788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 22025439 - 22025290
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    |||||||||| |  ||| ||| ||||||||||||| |||| |||||||||||||| ||||||| ||||||| || ||| |||||||||||||||| ||||    
T  22025439 ggccaaatacaacttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaatt 22025340  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    | ||||||| |||||| || |||||| |||||||||| || ||||||||||    
T  22025339 cccaagttagtccttt-aagttcaaaggtttcaaataggtaattttagttt 22025290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 8408984 - 8408843
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||| ||| ||  |  |||||||||||||||| |||| |||||||| || |    
T  8408984 tttggtcattttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgacagaattttcaagttagtcat 8408885  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||| |||||||||||||||||| ||||| |||||| |||||    
T  8408884 ttaagtttcaaaagtttcaaataggtcatcttagttgataaa 8408843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 35046437 - 35046545
Alignment:
Q  106 tttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttc 205  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||||| |||||  || ||| |||||||| ||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  206 aaaagtttc 214  Q
    |||||||||    
T  35046537 aaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 42116144 - 42116069
Alignment:
Q  85 ccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42116144 ccaaataccatttttggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaatag 42116069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 407
Target Start/End: Complemental strand, 5387706 - 5387425
Alignment:
Q  135 ctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttta 234  Q
    |||||||||| | |||||| ||||| ||| ||||||||||||| |||||| |||| |  ||||||||||| |||||||||||||| ||  ||| | || |    
T  5387706 ctttaagttttataagtttcaaataaatt-ttttagtttgacaaaattcttaagtaagacctttaaattttaaaagtttcaaatatgtactttcacttga 5387608  T
Q  235 taaatcatttctctgtt---------gtgagttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaag 325  Q
    ||||| ||||| | |||         || ||||||||||||| |||| || |||||| | |||||||||||| ||| |||||| |||| | |||||||||    
T  5387607 taaattatttcaccgttacccctgctgttagttaataattaactgatgttgatgtagtctttaaattgttgatttgtatcaaatcgcttccttttaaaag 5387508  T
Q  326 ctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    || ||   |||||||| |||||||| |||  | | |||| |||||| ||||||| ||||||||||||||||||| ||||||||    
T  5387507 cttcaatatgtcaaaaagttacatttaatagttataaatgatcattctatcactgtaaatgtcgtttaatagtgatagaaaga 5387425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 41735743 - 41735888
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||||||  ||||||||||||||||| |||| ||| |||||||||| |||| |||||  ||||||| || | | | |||||||||| ||||||||| ||    
T  41735743 aaataccacttttggtccttttagtttaacaagattctcaagttagttcttttagttttgaaagtttcaactgg-tccttttagtttaacataattccca 41735841  T
Q  187 agttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  41735842 agttagtcctttaagtttcaaaagtttcaaataggtccttttagttt 41735888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 41735814 - 41735923
Alignment:
Q  99 tggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttt 198  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||| |||||| | |||||||||||||| ||||  ||||| | ||||||    
T  41735814 tggtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatttccaagtcagtccttt 41735913  T
Q  199 aaatttcaaa 208  Q
    ||||||||||    
T  41735914 aaatttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 52183558 - 52183437
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||| || |||   |||||||||||||| ||||| ||    
T  52183558 aaataccacgtttggtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattccca 52183459  T
Q  187 agttaatcctttaaatttcaaa 208  Q
    ||  | |||||||| |||||||    
T  52183458 agccagtcctttaagtttcaaa 52183437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 5387131 - 5387267
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 201  Q
    |||||||||||||||  |||||  ||||||||||||||||||| |||||||| || || ||  ||||||||||||| ||||| |||||||  |||||||     
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaag 5387230  T
Q  202 tttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||||||||||||  || |||||||| |||||    
T  5387231 tttcaaaagtttcaaatagatctttttagttgataaa 5387267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 43098473 - 43098365
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 199  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||  |  ||||||||| ||| ||||| ||||||| |||||||    
T  43098473 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtttaacagaattcccaagttagtccttta 43098374  T
Q  200 aatttcaaa 208  Q
    | |||||||    
T  43098373 agtttcaaa 43098365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 2909182 - 2909287
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 203  Q
    |||||||||| ||| |||| |||||||||| ||||||||||| ||||| | || ||| |||||||||||| ||| ||||||||||||| |||||||||||    
T  2909182 cttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaatt 2909281  T
Q  204 tcaaaa 209  Q
    ||||||    
T  2909282 tcaaaa 2909287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 52865942 - 52866067
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||||||||  ||||||| || ||  |||||||||||||||| |||     
T  52865942 ggccaaataccactttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatg 52866041  T
Q  183 ctcaagttaatcctttaaatttcaaa 208  Q
    |||||  || |||||||| |||||||    
T  52866042 ctcaatctagtcctttaagtttcaaa 52866067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 2788795 - 2788894
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 201  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||||||||||| | |||||||    
T  2788795 tccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtactttaaa 2788894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 43098171 - 43098319
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| || ||| | ||||||||||  || | |||      
T  43098171 caaataccacttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccg 43098270  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||| ||    || |||||||||||||||||||||| |||||||| |||||    
T  43098271 aagttagtc----aagtttcaaaagtttcaaataagtccttttagttgataaa 43098319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 404
Target Start/End: Complemental strand, 52866298 - 52866171
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcattttatc 375  Q
    ||||| ||||||| ||||| ||||||||||||||| | | |||||||||||||||||||||||||  |||  || |||  |||||||| |||||| || |    
T  52866298 atgtacccgttaagttgttcacttggatcaaaacgtttctttttaaaagctccagggtgtcaaaacatta-gtttaatcgtcacaaatgatcattctagc 52866200  T
Q  376 actataaatgtcgtttaatagtgctagaa 404  Q
    ||||||||||||||||||||||| |||||    
T  52866199 actataaatgtcgtttaatagtgttagaa 52866171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 52567732 - 52567806
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    |||||| || |||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||    
T  52567732 caaatatcacgtttggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaatag 52567806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 23085340 - 23085224
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    ||||| ||| |||||| |||||||||||||| || ||| ||||||||| |||||||||||||||||| || |||| ||||||||||| | | |||| |||    
T  23085340 aaatatcatttttggttcttttagtttgacagaaattttaagttagtc-tttaagtttcaaaagtttcaattagaatcttttagttttatagaattttca 23085242  T
Q  187 agttaatcctttaaattt 204  Q
    | ||| ||||||||||||    
T  23085241 aattagtcctttaaattt 23085224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 44916371 - 44916324
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44916371 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 52866429 - 52866366
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 149  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||||    
T  52866429 caaataccatgtttggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaa 52866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 219
Target Start/End: Complemental strand, 52568311 - 52568197
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 204  Q
    ||||||||||||| || |  ||| ||||| |||||| |||||||||||| || ||| |  ||||||||||| | ||||||||||| | |||||||| |||    
T  52568311 ttttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtttgatagaattctcaagtcagtcctttaagttt 52568212  T
Q  205 caaaagtttcaaata 219  Q
    |||||||||||||||    
T  52568211 caaaagtttcaaata 52568197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 19632320 - 19632248
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    ||||||| || ||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||||||    
T  19632320 caaatacgatttttggtccttttagtttgacagaattctcaaattagt-ctttaagtttcaaaagttttaaata 19632248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 35046642 - 35046550
Alignment:
Q  126 aagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaat 218  Q
    |||||||| ||||||||||| |||||||||| | |    ||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||    
T  35046642 aagttagtgctttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 2508252 - 2508323
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat 158  Q
    |||||| || |||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||    
T  2508252 aaatactatttttgatccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat 2508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 341
Target Start/End: Complemental strand, 19632302 - 19632118
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa-----tca---tttctctgttgtga 255  Q
    |||||||||||||| ||||||||| ||| || ||||| |||||||||||| ||||| |||||||||||| |||||     |||   || | ||||||| |    
T  19632302 cttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagttttaaatatgtcattttagttgataaactacttcactgttaccctgttgtta 19632204  T
Q  256 gttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    ||    | |||| |||| || ||||||||||||| ||||||||| ||||||||| | | |||||||||||||| || |||||||||    
T  19632203 gtctccatttaactgatgttgatgtagccgttaagttgttgactaggatcaaaatgttacattttaaaagctcaagagtgtcaaaa 19632118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 86 - 364
Target Start/End: Original strand, 19681184 - 19681464
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||| ||||||||||  ||||||||  |||| ||||||||||  |||||||||| ||| ||| || |||||  ||||||||||||| |||||      
T  19681184 caaataccatttttggtcctt--agtttgaccgaattctcaagttagttttttaagtttcgaaattttcaattagatcattttagtttgacagaattccg 19681281  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc---------tgttgtgagttaataattaattgatatta 276  Q
    ||||    |||||||  | |||| | |||||||| |||||||||||| |||||  ||||| |         || | | ||||| ||||| | |||| ||     
T  19681282 aagt----cctttaaggtgcaaaggattcaaataggtcattttagttgataaactatttcaccattacccctgctatcagtta-taattgactgatgttg 19681376  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||||||||||| |||||||||||||||| || | ||  |||||||||||| ||| |||||||| ||||| || |||| ||||||||    
T  19681377 atgtagccgttaagttgttgacttggatcataatgttgtcttttaaaagctcgaggatgtcaaaacgttacgtttaatggtcacaaat 19681464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 22025358 - 22025274
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagt 189  Q
    |||||||||||||| ||||  ||||||||||||||||||| |||| |||| |||||| |  ||||||||||||| |||||||||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaagtt-caaaggtttcaaataggtaattttagtttgacagaattctcaagt 22025274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 26329826 - 26329879
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  26329826 ggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagttt 26329879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 35046603 - 35046550
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat 158  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 26330008 - 26329948
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    |||||||||||||||||| ||||  |||||||||| |||||||||||||||||| ||||||    
T  26330008 ggtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaatag 26329948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 52568311 - 52568243
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||| || ||| ||| | |||||||||||||||||||||| || |||||||||||||    
T  52568311 ttttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagttt 52568243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 52182125 - 52182046
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggt 334  Q
    ||||||||||||| |||| || ||||||||||||| ||||||||||  ||||||| | ||  ||||||||||||||||||    
T  52182125 agttaataattaactgatgttgatgtagccgttaagttgttgacttaaatcaaaatgatgtcttttaaaagctccagggt 52182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 52568256 - 52568189
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttt 167  Q
    |||| ||||||||||| | |||| |||||| ||||||||||||||||||||||| |||||||| ||||    
T  52568256 ggtcattttagtttgatagaattctcaagtcagtcctttaagtttcaaaagtttcaaatagatccttt 52568189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 19631770 - 19631839
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||| ||||||| ||||||||||||| |||||||| |||| |||||||||| || ||| |||||||||    
T  19631770 cttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttt 19631839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 2508751 - 2508671
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    ||||| ||||| | |||| | |||||| ||||||||||||||||||||| ||||| ||| |||||||| |||||| |||||    
T  2508751 ttttaatttgataaaatttttaagttactcctttaaatttcaaaagttttaaatatgtccttttagttgataaattatttc 2508671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 22025116 - 22025188
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    |||| ||||||||||||| |||| | |||||||||| ||||| || |||||||| |||||| |||||||||||    
T  22025116 ggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagtt 22025188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 2508751 - 2508684
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||| ||||| |||||||| |||||| |||||||| ||||||||||||||||||  | |||||||||    
T  2508751 ttttaatttgataaaatttttaagttactcctttaaatttcaaaagttttaaatatgtccttttagtt 2508684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 9320015 - 9320086
Alignment:
Q  162 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||||| ||||||||||||| |  ||||| |||| |||||||||| |||||  |||||||||    
T  9320015 ttcttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagttt 9320086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 35024036 - 35023969
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||| ||| |||| ||||||||||| ||||||||| ||||||||| ||| ||| |||||||||    
T  35024036 ttttagttttacacaattctcaagttagtcttttaagttttaaaagtttttaattgatccttttagtt 35023969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 228
Target Start/End: Original strand, 36890399 - 36890542
Alignment:
Q  88 aataccatgtttggtccttttagtttgacaaaattttcaagttagtcctt-taagtttcaaaagttttaaatagattcttttag-tttgacataattctc 185  Q
    |||||||  ||||||||||||||| ||||  ||||  ||||| ||||||| |||||||  ||||||| || |||||  |||| | ||||||| |||||      
T  36890399 aataccacttttggtccttttagtatgactgaattcccaagtcagtccttctaagttttgaaagtttcaattagatcatttttggtttgacagaattccg 36890498  T
Q  186 aagttaa-tcctttaaatttcaaaagtttcaaataagtcatttt 228  Q
    ||||| | || ||||| |||||||||||||||||||||||||||    
T  36890499 aagtttagtcttttaagtttcaaaagtttcaaataagtcatttt 36890542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 52568118 - 52568047
Alignment:
Q  293 gttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||||||| | ||| || |||| ||||||||    
T  52568118 gttgacttggatcaaaatgatgcgttttaaaagctctagggtgtcaaaacgctacgtttaatggtcacaaat 52568047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 2508269 - 2508348
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    |||||||||||||| ||||  ||||||| ||||||||  ||||||||||||||||  |||||| ||||| ||||| ||||||    
T  2508269 cttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat--gtcattctagttgataaaccatttc 2508348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 26329805 - 26329883
Alignment:
Q  139 aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaa 217  Q
    ||||||| ||||||| || ||| | |||||||||||||| ||||  |||||||  ||||||| ||||||||||||||||    
T  26329805 aagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaaa 26329883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 36890704 - 36890630
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||||||||||| |||| | ||||||||| ||||| ||| ||||||||  |||| |||||||||||| |||||    
T  36890704 cttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaa 36890630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 2788797 - 2788866
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||   ||||||||||||| |||||||| |||| |||||||||| || ||| |||||||||    
T  2788797 cttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttt 2788866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 30542796 - 30542897
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaa 363  Q
    |||||| ||| | ||||| ||||||| ||||| |||| ||| |||| | || ||||||||| ||| |||||||||||| | ||| || ||||||||||||    
T  30542796 ttaattaatactgatgtaaccgttaagttgttaacttagattaaaatgttgtattttaaaaactctagggtgtcaaaacgctacgtttaatgatcacaaa 30542895  T
Q  364 ta 365  Q
    ||    
T  30542896 ta 30542897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 42115652 - 42115705
Alignment:
Q  177 ataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttag 230  Q
    ||||||||||||||| |||||||| | |||||||||| ||||||||| ||||||    
T  42115652 ataattctcaagttagtcctttaagtctcaaaagttttaaataagtccttttag 42115705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 42116124 - 42116051
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||||||| |||| | |||||| |||||||| |||||||||||| ||||| ||| ||||| || |||||    
T  42116124 ttttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaa 42116051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 52183541 - 52183472
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||| ||| ||||||||||||| |||||||| |||| |||||||||| || | | |||||||||    
T  52183541 cttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagttt 52183472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 31229703 - 31229639
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||||| |||||| ||||||||||| ||||||| ||| | ||| |||||||| ||||||||||||    
T  31229703 atgtagtcgttaagttgttgacttgaatcaaaatgcttcctttcaaaagctcgagggtgtcaaaa 31229639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 42115654 - 42115694
Alignment:
Q  119 aattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  42115654 aattctcaagttagtcctttaagtctcaaaagttttaaata 42115694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 26329762 - 26329809
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagtt 130  Q
    ||||||||||||| ||||||||||||| ||||||| |||| |||||||    
T  26329762 ggccaaataccatttttggtccttttaatttgacagaattctcaagtt 26329809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 35046493 - 35046544
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    |||||||||||||||| ||||   || |||||||||||||||||||||||||    
T  35046493 tccttttagtttgacagaattcctaaattagtcctttaagtttcaaaagttt 35046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 36890540 - 36890583
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||    
T  36890540 ttttaatttgacataatttccaagttagtcctttaagtttcaaa 36890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 36890706 - 36890655
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    |||||||||||||||| |||||| |||||| || ||||||||| ||||||||    
T  36890706 tccttttagtttgacagaatttttaagttaatcatttaagttttaaaagttt 36890655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 52866413 - 52866366
Alignment:
Q  162 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaa 209  Q
    |||||||||||||||| ||||| ||||||| |||||||| ||||||||    
T  52866413 ttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaa 52866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 19631918 - 19631972
Alignment:
Q  248 tgttgtgagttaataattaattgatattaatgtagccgttaaattgttgacttgg 302  Q
    |||||| | ||||||||||||||||  | ||||||||||||| ||||||||||||    
T  19631918 tgttgtcatttaataattaattgatgctgatgtagccgttaagttgttgacttgg 19631972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 22025121 - 22025194
Alignment:
Q  165 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    ||||||||||||| |||||| |||||| ||| ||||  || |||||||||||||| ||  |||||||| |||||    
T  22025121 ttttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaa 22025194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 41736015 - 41735958
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaa 140  Q
    ||||||||||||  |||| |||||||||||||||| ||||  ||||||||| ||||||    
T  41736015 ggccaaataccacttttgatccttttagtttgacagaattcccaagttagtactttaa 41735958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 52865963 - 52866012
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagttt 213  Q
    |||||||||||||| ||||||||||||| |||||||| |||  |||||||    
T  52865963 cttttagtttgacagaattctcaagttagtcctttaagttttgaaagttt 52866012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 2788853 - 2788893
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaa 140  Q
    |||||||||||||||||| |||| |||||||||| ||||||    
T  2788853 ggtccttttagtttgacagaattctcaagttagtactttaa 2788893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 22025052 - 22025100
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagtta 131  Q
    ||||||||||||  ||||||||||||||||||||| ||||  |||||||    
T  22025052 ggccaaataccacttttggtccttttagtttgacagaattcccaagtta 22025100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 23085212 - 23085172
Alignment:
Q  105 ttttagtttgacaaaattttcaagttagtcctttaagtttc 145  Q
    |||||||||||||||||| |||| |||||||||||| ||||    
T  23085212 ttttagtttgacaaaattatcaaattagtcctttaaatttc 23085172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 25730137 - 25730177
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  25730137 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 25730177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 26329913 - 26329881
Alignment:
Q  201 atttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||||||| |||||||||    
T  26329913 atttcaaaagtttcaaataagtccttttagttt 26329881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 31617679 - 31617639
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||||||||| ||||| |||||||||    
T  31617679 tcctttaagtttcaaaagtttcaaacaagtccttttagttt 31617639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 33174264 - 33174224
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||| ||||| ||||| |||||||||    
T  33174264 tcctttaaatttcaaaagtctcaaacaagtccttttagttt 33174224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 33693290 - 33693326
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcatttta 229  Q
    |||||||||||||||||||| |||||||||| |||||    
T  33693290 tcctttaaatttcaaaagttccaaataagtcctttta 33693326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 44916368 - 44916324
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaa 208  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||    
T  44916368 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 48551721 - 48551761
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  48551721 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 48551761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 4e-48; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 148 - 407
Target Start/End: Original strand, 31247178 - 31247446
Alignment:
Q  148 aagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctc 247  Q
    |||||||||||| || |||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||| | |||||| |||||  ||||  |    
T  31247178 aagttttaaatatatccttttagtttgacaaaattctcaagttagtc-tttaagtttcaaaagtttcaaataagtcctattagttgataaactattttac 31247276  T
Q  248 tgtt---------gtgagttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtca 338  Q
    ||||         || ||||| ||||||||||||  | ||||||||||||| ||||||||||||||||||||| ||  ||||||||| |||| |||||||    
T  31247277 tgttactcctgctgtcagttattaattaattgatgctgatgtagccgttaagttgttgacttggatcaaaacgttgtcttttaaaagttccatggtgtca 31247376  T
Q  339 aaatgttacattcaatgatcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    |||| |||| || |||| | |||||| |||||| || |||| ||||||||||||||||||||||||||||    
T  31247377 aaatattacgtttaatggttacaaatgatcattctagcactgtaaatgtcgtttaatagtgctagaaaga 31247446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 245
Target Start/End: Complemental strand, 31247782 - 31247620
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||| ||  ||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||| || ||| | ||||||||| |||| ||||    
T  31247782 ggccaaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacagaatt 31247683  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    | ||||||| | |||||| |||||||||||||||||| |||||||||||| |||||| |||||    
T  31247682 cccaagttagtgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttc 31247620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 256 - 407
Target Start/End: Original strand, 3087207 - 3087359
Alignment:
Q  256 gttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatg 355  Q
    |||||||||||||||||  | |||||||| |||| |||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||| || ||||    
T  3087207 gttaataattaattgatgctgatgtagcctttaagttgttgacttggatcaaaacgctgcattttaaaatctcaaaggtgtcaaaacgttacgtttaatg 3087306  T
Q  356 atcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
     ||| |||| ||| || || ||||||||||||  |||||||||||||||||||    
T  3087307 gtcataaatgatcgttctaacactataaatgttatttaatagtgctagaaaga 3087359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 257 - 407
Target Start/End: Complemental strand, 53783348 - 53783197
Alignment:
Q  257 ttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatga 356  Q
    ||||||||||| |||| || |||||| |||||| ||||||| || ||||||||| ||||||||||||||||||| ||||||||||| |||| || |||      
T  53783348 ttaataattaactgatgttgatgtagtcgttaagttgttgatttagatcaaaacactgcattttaaaagctccaaggtgtcaaaatattacgtttaatag 53783249  T
Q  357 tcacaaat-atcattttatcactataaatgtcgtttaatagtgctagaaaga 407  Q
    |||||||| |||||| || |||||||||||| ||||||||||| ||||||||    
T  53783248 tcacaaatgatcattctagcactataaatgttgtttaatagtgttagaaaga 53783197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 3087086 - 3087190
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 200  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||| |||||    
T  3087086 gtccttttaatttgatagaattttcaagttagtc-tttaagtttcaaaagttttaaataaatccttttagtttgacagaattctcaagtaaatcttttaa 3087184  T
Q  201 atttca 206  Q
    ||||||    
T  3087185 atttca 3087190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 385
Target Start/End: Original strand, 35555516 - 35555827
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttag-tcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    ||||| || ||||||||||||||  |||||| ||||  |||||||| || |||||||||||||||||| || || ||  ||||||||||||| |||| ||    
T  35555516 aaatatcacgtttggtccttttaaattgacagaattcacaagttagatcttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatc 35555615  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatt---------tctctgttgtgagttaataattaattgatatta 276  Q
    |||||| ||| ||||||||  |||||||||||||| ||||||||||| |||||  |||         || ||| | | ||||||||||||| | || ||     
T  35555616 aagttagtccattaaattttgaaagtttcaaataaatcattttagttgataaactatttcaccgttatccctgctatcagttaataattaactaatgttg 35555715  T
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgc--attttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat-atcatttta 373  Q
    || |||||||||| ||| |||||| |||||||||||| |   |||||||| ||||||||||| |||| ||||| || |||  |||||||| || ||| ||    
T  35555716 atatagccgttaagttgctgacttagatcaaaacgcttcctcttttaaaaactccagggtgttaaaacgttacgtttaatagtcacaaatgattattcta 35555815  T
Q  374 tcactataaatg 385  Q
     |||||||||||    
T  35555816 gcactataaatg 35555827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 97 - 251
Target Start/End: Original strand, 4276135 - 4276289
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||||  ||||||| || ||  |  |||||||||||||||||| | | |||| | ||    
T  4276135 tttggtccttttagtttgacaatatttttaagttagttctttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagttct 4276234  T
Q  197 ttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||| ||||||||||||||||||  ||||||||||| |||||  ||||| |||||    
T  4276235 ttaagtttcaaaagtttcaaatagttcattttagttgataaactatttcactgtt 4276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 365
Target Start/End: Original strand, 24707574 - 24707684
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    |||||||||||||||||| || ||||||||||||||||||||| || |||||||| | ||| ||| |||||||| |||||||||||| | |||||| |||    
T  24707574 agttaataattaattgatgttgatgtagccgttaaattgttgatttagatcaaaatgttgcctttaaaaagctcgagggtgtcaaaacgctacatttaat 24707673  T
Q  355 gatcacaaata 365  Q
    | |||||||||    
T  24707674 ggtcacaaata 24707684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 364
Target Start/End: Complemental strand, 35555918 - 35555831
Alignment:
Q  277 atgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||| | ||| || |||||||||||||    
T  35555918 atgtagccgttaagttgttgacttggatcaaaatgcttcattttaaaagctcaagggtgtcaaaacgctacgtttaatgatcacaaat 35555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 21376554 - 21376707
Alignment:
Q  85 ccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattct 184  Q
    ||||||| ||| ||| ||||||||| ||||||  || ||| ||||||| | ||||| ||| ||||||||||| ||  |||||||||||||| | |||| |    
T  21376554 ccaaatatcatttttagtccttttaatttgactgaacttttaagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaatttt 21376653  T
Q  185 caagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    || |||  |||||||| |||||||||||| ||||| |||||||||||| |||||    
T  21376654 caggttggtcctttaagtttcaaaagttttaaatatgtcattttagttgataaa 21376707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 50530235 - 50530336
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| ||| |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||| |||| ||| |  ||||||||||||| |||||||    
T  50530235 caaatatcatttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaattctc 50530334  T
Q  186 aa 187  Q
    ||    
T  50530335 aa 50530336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 14629375 - 14629474
Alignment:
Q  247 ctgttgtgagttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgtta 346  Q
    ||||||| ||||||||||||| | ||  || |||||||||||| ||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  14629375 ctgttgtcagttaataattaactaatgcta-tgtagccgttaagttgttgatttgaatcaaaacgctgccttttaaaagctctagggtgtcaaaatgtta 14629473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 54456912 - 54456799
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 203  Q
    |||||||||||| | || || ||| ||| ||| |||||| |||||||||| |||||| | |||||| ||||||||||||  ||||||| |||||||| ||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttagtcctttaagtt 54456813  T
Q  204 tcaaaagtttcaaa 217  Q
    ||||||||||||||    
T  54456812 tcaaaagtttcaaa 54456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 3088217 - 3088106
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||||||| ||||||||||||| | |||||| |||| ||||||| || ||  | ||||||||||||||| |||  | ||||| ||||    
T  3088217 tttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcctagttagtcct 3088118  T
Q  197 ttaaatttcaaa 208  Q
    |||| |||||||    
T  3088117 ttaagtttcaaa 3088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 21377136 - 21377037
Alignment:
Q  84 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 183  Q
    |||||||| || |||||||||||||||||||||| ||||| ||||||| | |||||| |||| ||||||| || ||| |  |||||||||||||||||||    
T  21377136 gccaaataacacgtttggtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtttgacataattc 21377037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 14629617 - 14629540
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||| |||| || ||||||||||||| || |||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  14629617 ttaactgatgttgatgtagccgttaagttattgacttggatcaaaatgctgccttttaaaagctcgagggtgtcaaaa 14629540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 54456979 - 54456847
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    ||||||||||||||||| | | |||| ||||||||| |||||||||||  |||| || || |||||||||||||||||| | || |  ||| ||| |||     
T  54456979 tttggtccttttagtttaatagaattctcaagttagccctttaagtttagaaagcttcaattagattcttttagtttgatagaacttccaaattattccc 54456880  T
Q  197 ttaaatttcaaaagtttcaaataagtcatttta 229  Q
    |||| | |||||||||||||||| ||| |||||    
T  54456879 ttaagtatcaaaagtttcaaataggtcctttta 54456847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 3088210 - 3088141
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| |||| |||||||||| ||||||||||| |||||||||| || ||| |||||||||    
T  3088210 cttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagttt 3088141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 14629271 - 14629336
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    |||||||||| | |||||||||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  14629271 ggccaaatactacgtttggtccttttactttgacagaattcccaagttagtcctttaagtttcaaa 14629336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 21377116 - 21377047
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| ||||  ||||||||| ||||||||||| |||||||||| || |||||||||||||    
T  21377116 cttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagttt 21377047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 31247192 - 31247248
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  31247192 tccttttagtttgacaaaattctcaagttagt-ctttaagtttcaaaagtttcaaata 31247248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 54456856 - 54456803
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 153  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  54456856 ggtccttttaatttgacataatttccaagttagtcctttaagtttcaaaagttt 54456803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 5505800 - 5505728
Alignment:
Q  102 tccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagttt 173  Q
    ||||||| |||||||| |||||  || |||||||||| |||||||||||||||||||||||| ||||||||||    
T  5505800 tcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagttt 5505728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 14964737 - 14964784
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  14964737 gtccttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 24707471 - 24707542
Alignment:
Q  101 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 172  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||  ||||||||||||| ||  ||||||||    
T  24707471 gtccttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagtt 24707542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 53783071 - 53783151
Alignment:
Q  284 cgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    |||||| ||||||| ||||||||||| |||||||||||||||  | |||||||||||| | ||| || |||| ||||||||    
T  53783071 cgttaagttgttgatttggatcaaaatgctgcattttaaaagaccgagggtgtcaaaacgctacgtttaatggtcacaaat 53783151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 35556038 - 35555987
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    |||||||||||||||||| |||||||  ||||||| ||||||||||||||||    
T  35556038 tttggtccttttagtttggcaaaattcccaagttaatcctttaagtttcaaa 35555987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 50530459 - 50530397
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 148  Q
    |||||||||| |||| |||||||||||| ||  |||||  |||||||||||||||||||||||    
T  50530459 caaataccatttttgatccttttagtttcacttaatttctaagttagtcctttaagtttcaaa 50530397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 4276311 - 4276388
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||| |||| || ||||||| ||||| ||||||| || |||||||| | ||| |||||||||||| ||||||||||||    
T  4276311 ttaactgatgttgatgtagcggttaagttgttgatttagatcaaaatggtgccttttaaaagctcgagggtgtcaaaa 4276388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 4276741 - 4276629
Alignment:
Q  87 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 186  Q
    |||||||||||||||| |||||||||||||| ||||  ||| | | |||||||||||||         || |||||  ||||||||||||| ||||| ||    
T  4276741 aaataccatgtttggtacttttagtttgacagaattcccaaataaatcctttaagtttc---------aattagatcattttagtttgacagaattccca 4276651  T
Q  187 agttaatcctttaaatttcaaa 208  Q
    ||||| |||||||| |||||||    
T  4276650 agttagtcctttaagtttcaaa 4276629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 19153883 - 19153972
Alignment:
Q  163 tcttttagtttgacataa-ttctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    ||||||||||||||| || || |||||||| |  ||||| ||||||| |||||||||| ||| |||||||| |||||| ||||| |||||    
T  19153883 tcttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaattatttcactgtt 19153972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 54456660 - 54456733
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||||| ||| |||| |||||||||||||||| |||||  || |||||| |||||||||| ||||||| |||||    
T  54456660 caaatatcatttttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaata 54456733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 21376742 - 21376842
Alignment:
Q  264 ttaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaa 363  Q
    |||| |||| || ||||||||||||| ||||||||||| || |||| | ||  |||||||||||| | |||||||||| | ||| || |||| |||||||    
T  21376742 ttaactgatgttgatgtagccgttaagttgttgacttgaattaaaatgttgtcttttaaaagctcgatggtgtcaaaacgctacgtttaatggtcacaaa 21376841  T
Q  364 t 364  Q
    |    
T  21376842 t 21376842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 385
Target Start/End: Complemental strand, 21376976 - 21376846
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    ||||||||||||| |||  || ||||| || |||| |||||| |||||||||||||| ||  |||||||||||| |||||| ||||| | ||  || |||    
T  21376976 agttaataattaactgaggttgatgtatcc-ttaagttgttgtcttggatcaaaacgttgtcttttaaaagctctagggtgccaaaacgatatgtttaat 21376878  T
Q  355 gatcacaaat-atcattttatcactataaatg 385  Q
      |||||||| |||||| || |||||||||||    
T  21376877 cgtcacaaatgatcattctagcactataaatg 21376846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 54456678 - 54456752
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||||||||||| ||||   || ||| || ||||| |||| ||||||||||||| |||||||||||| |||||    
T  54456678 cttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaa 54456752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 18745563 - 18745502
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagttt 144  Q
    |||||||||| || ||||||||||| | ||||| |||||| |||| ||||| ||||||||||    
T  18745563 ggccaaatacaatttttggtcctttaaatttgataaaattatcaaattagtactttaagttt 18745502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 31122847 - 31122806
Alignment:
Q  192 atcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  31122847 atcctttaagtttcaaaagtctcaaacaagtcattttagttt 31122806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 50530253 - 50530322
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| |||| |||| ||| || ||||| |||||||||| | || || |||||||||||||    
T  50530253 cttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagttt 50530322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 53925939 - 53925988
Alignment:
Q  196 tttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    ||||| ||||||||||| |||| ||||||||||||||| | |||||||||    
T  53925939 tttaagtttcaaaagttccaaacaagtcattttagtttttgaatcatttc 53925988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 19153884 - 19153940
Alignment:
Q  104 cttttagtttgacaaaattt-tcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    |||||||||||||| ||||| ||||||||||  ||||||||||||| |||| |||||    
T  19153884 cttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaata 19153940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 19664438 - 19664478
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  19664438 tcctttaagtttcaaaagtctcaaataagtccttttagttt 19664478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 19664724 - 19664684
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||| ||||||||||||| |||||||||    
T  19664724 tcctttaagtttcaaaaatttcaaataagtctttttagttt 19664684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 26455479 - 26455519
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||||||||||||||||| ||||| ||||| |||||||||    
T  26455479 tcctttaaatttcaaaagtctcaaacaagtctttttagttt 26455519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 32650777 - 32650829
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagtttataaatcatttc 245  Q
    |||||||| |||||||||||||||| || || ||||||||| | |||||||||    
T  32650777 tcctttaagtttcaaaagtttcaaacaattctttttagtttttgaatcatttc 32650829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 35556031 - 35555987
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaa 208  Q
    ||||||||||| || ||||| |||||||||||||||| |||||||    
T  35556031 cttttagtttggcaaaattcccaagttaatcctttaagtttcaaa 35555987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 53196197 - 53196157
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  53196197 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 53196157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 55164359 - 55164319
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  55164359 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 55164319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 247 - 400
Target Start/End: Complemental strand, 29024 - 28872
Alignment:
Q  247 ctgttgtgagttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgtta 346  Q
    ||||||| |||||||||||||||||| || ||||||| ||||| ||||||| ||||||||||||| ||| ||||||||||| | ||||||||||| ||||    
T  29024 ctgttgtcagttaataattaattgatgttgatgtagcggttaagttgttgatttggatcaaaacgatgccttttaaaagcttc-gggtgtcaaaacgtta 28926  T
Q  347 cattcaatgatcacaaatatcattttatcactataaatgtcgtttaatagtgct 400  Q
    | || |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  28925 cgtttaatgatcacaaacatcattttagcactataaatgtcgtttaatagtgct 28872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 251
Target Start/End: Original strand, 28545 - 28698
Alignment:
Q  98 ttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 197  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||  ||||||| || ||| | |||||| ||||||| ||||||||||||| |||||    
T  28545 ttggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctt 28644  T
Q  198 taaatttcaaaagtttcaaataagtcattttagtttataaatcatttctctgtt 251  Q
    |||| ||||||||||||||||| |||||||||||| |||||  ||||| |||||    
T  28645 taaaattcaaaagtttcaaataggtcattttagttgataaactatttcactgtt 28698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 28725 - 28797
Alignment:
Q  269 tgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaa 341  Q
    |||| || |||||||| |||| |||||||||||||||| || | ||| |||||||||||| | ||||| ||||    
T  28725 tgatgttgatgtagccattaagttgttgacttggatcacaatgttgccttttaaaagctcaatggtgtaaaaa 28797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 73; Significance: 3e-33; HSPs: 6)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 255 - 398
Target Start/End: Complemental strand, 9859 - 9715
Alignment:
Q  255 agttaataattaattgatattaatgtagccgttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaat 354  Q
    |||||||||||||| ||   | |||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| |||    
T  9859 agttaataattaatcgaggctgatgtagtcgttacattgttgacttggatcaaaacgctgtcttttaaaagctccagggtgtcaaaacgttacatttaat 9760  T
Q  355 gatcacaaat-atcattttatcactataaatgtcgtttaatagtg 398  Q
      |||||||| |||||| || || |||||||||||||||||||||    
T  9759 cgtcacaaatgatcattctagcattataaatgtcgtttaatagtg 9715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 10009 - 9896
Alignment:
Q  85 ccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattct 184  Q
    ||||||| || |||| ||||||||||||||||| |||| |||||||||| ||||||||||| ||||||| || ||| | ||||||||||||||||||||     
T  10009 ccaaatatcacgtttcgtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcc 9910  T
Q  185 caagttaatccttt 198  Q
    ||||||| ||||||    
T  9909 caagttagtccttt 9896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 9383 - 9505
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||| ||| ||| ||||||||||||||||| |||| | ||||||||| ||||||||||  |||||| || ||| | |||||||||| | | |||||||    
T  9383 caaatatcatttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaatagaattctc 9482  T
Q  186 aagttaatcctttaaatttcaaa 208  Q
    |||||| | |||||| |||||||    
T  9483 aagttagttctttaagtttcaaa 9505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 9990 - 9921
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||||||||| ||||||||||||| | |||||| |||| |||||||||| ||  || |||||||||    
T  9990 cttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagttt 9921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 9582 - 9661
Alignment:
Q  285 gttaaattgttgacttggatcaaaacgctgcattttaaaagctccagggtgtcaaaatgttacattcaatgatcacaaat 364  Q
    ||||| |||||||||| ||||||||   ||| |||||||||||| |||||||||||| | ||| || |||| ||||||||    
T  9582 gttaagttgttgactttgatcaaaatattgccttttaaaagctcgagggtgtcaaaacgctacgtttaatggtcacaaat 9661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 9401 - 9471
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttta 234  Q
    |||||||||||||| |||||| |||||| || ||||| ||||  ||||||||| || ||| ||||||||||    
T  9401 cttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagttta 9471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 124132 - 124262
Alignment:
Q  86 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 185  Q
    |||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| || | |||||||||||||| ||||| |    
T  124132 caaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattccc 124231  T
Q  186 aagttaatcctttaaatttcaaaagtttcaaa 217  Q
    || ||| | |||||| ||||||||||||||||    
T  124232 aatttagt-ctttaagtttcaaaagtttcaaa 124262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 124495 - 124345
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 182  Q
    ||||||||||||  |||||||||||| |||||| | ||||  ||||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||    
T  124495 ggccaaataccacttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatt 124396  T
Q  183 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
      ||||||| |||||||| |||| |||||||||| || ||| |||||||||    
T  124395 tccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagttt 124345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 124418 - 124328
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagtt 190  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| || ||| |  ||||||||||||| ||||| ||||||    
T  124418 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattcccaagtt 124328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 45327 - 45205
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 196  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||||||| |||||||| || ||| | ||||||||||||||||||| |||| ||| || |    
T  45327 tttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcat 45228  T
Q  197 ttaaatttcaaaagtttcaaata 219  Q
    |||| ||| ||||||||||||||    
T  45227 ttaagttttaaaagtttcaaata 45205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 45264 - 45177
Alignment:
Q  100 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa 187  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| |||||||| |||||||| |||||| ||||||| |||||||||    
T  45264 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattctcaa 45177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 45320 - 45251
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    ||||| |||||||||||||||||||||| || ||||| ||| ||||||||||| || ||| |||||||||    
T  45320 cttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagttt 45251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 48; Significance: 3e-18; HSPs: 5)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 16173 - 16236
Alignment:
Q  97 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 160  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||||    
T  16173 tttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaatag 16236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 16665 - 16590
Alignment:
Q  163 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||| |||||| | ||||  |||||||||||||||| ||| |||||||| |||||||||||||||||| |||||    
T  16665 tctttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaa 16590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 16059 - 16128
Alignment:
Q  83 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagtt 152  Q
    ||||||||||||  |||| || ||||||||| |||||||| | ||||||||| |||||||||||||||||    
T  16059 ggccaaataccacttttgatcattttagtttcacaaaattcttaagttagtcttttaagtttcaaaagtt 16128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 16664 - 16609
Alignment:
Q  104 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 159  Q
    ||||| |||||| ||||||| ||||||| |||||||||||| ||||||||||||||    
T  16664 ctttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaata 16609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 16180 - 16254
Alignment:
Q  164 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagtttataaa 238  Q
    |||||||||||| | ||||  ||| ||| |||||||| ||| |||||||| ||||| |||||||||||| |||||    
T  16180 cttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaa 16254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 218782 - 218822
Alignment:
Q  193 tcctttaaatttcaaaagtttcaaataagtcattttagttt 233  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  218782 tcctttaagtttcaaaagtctcaaacaagtcattttagttt 218822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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