View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21473_low_1 (Length: 414)

Name: NF21473_low_1
Description: NF21473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21473_low_1
NF21473_low_1
[»] chr1 (25 HSPs)
chr1 (295-380)||(38894754-38894839)
chr1 (295-381)||(47134703-47134789)
chr1 (295-381)||(19322346-19322432)
chr1 (296-380)||(33075659-33075743)
chr1 (318-381)||(46626326-46626389)
chr1 (295-380)||(22198910-22198995)
chr1 (292-380)||(1826789-1826877)
chr1 (302-366)||(5426222-5426286)
chr1 (295-381)||(16300388-16300474)
chr1 (312-377)||(28570741-28570806)
chr1 (331-380)||(29844884-29844933)
chr1 (331-380)||(10766221-10766270)
chr1 (296-380)||(42678374-42678458)
chr1 (293-366)||(1367288-1367361)
chr1 (295-381)||(52306068-52306154)
chr1 (298-367)||(43116050-43116119)
chr1 (295-366)||(4890097-4890168)
chr1 (295-366)||(17364620-17364691)
chr1 (298-381)||(19400733-19400816)
chr1 (295-366)||(29188317-29188388)
chr1 (295-366)||(33359699-33359770)
chr1 (331-381)||(50557862-50557911)
chr1 (296-364)||(41918924-41918992)
chr1 (295-366)||(10698135-10698206)
chr1 (298-381)||(51971274-51971356)
[»] scaffold0051 (1 HSPs)
scaffold0051 (295-366)||(62061-62132)
[»] chr4 (33 HSPs)
chr4 (295-366)||(12682772-12682843)
chr4 (298-381)||(13171627-13171710)
chr4 (295-381)||(3757725-3757811)
chr4 (295-381)||(50119959-50120045)
chr4 (301-366)||(46104184-46104249)
chr4 (312-380)||(8956932-8957000)
chr4 (312-380)||(8986904-8986972)
chr4 (312-380)||(37349802-37349870)
chr4 (295-366)||(2116088-2116159)
chr4 (308-367)||(35833429-35833488)
chr4 (295-381)||(51347487-51347573)
chr4 (295-380)||(24948289-24948374)
chr4 (326-381)||(30529280-30529335)
chr4 (295-381)||(3821200-3821286)
chr4 (312-377)||(9888895-9888960)
chr4 (295-380)||(39406234-39406319)
chr4 (331-380)||(53991554-53991603)
chr4 (293-380)||(29712366-29712454)
chr4 (293-381)||(36743203-36743291)
chr4 (318-381)||(24547353-24547416)
chr4 (295-381)||(20588561-20588647)
chr4 (331-380)||(578607-578656)
chr4 (331-376)||(35716305-35716350)
chr4 (312-380)||(50033697-50033764)
chr4 (326-381)||(17730463-17730518)
chr4 (316-366)||(5752471-5752521)
chr4 (295-381)||(39716719-39716805)
chr4 (300-381)||(15704115-15704196)
chr4 (296-381)||(35498534-35498619)
chr4 (295-380)||(43021891-43021976)
chr4 (319-381)||(16896008-16896070)
chr4 (296-350)||(47560251-47560305)
chr4 (318-366)||(52799047-52799095)
[»] chr5 (16 HSPs)
chr5 (301-381)||(12422346-12422426)
chr5 (312-380)||(6305452-6305520)
chr5 (299-381)||(42977834-42977913)
chr5 (312-380)||(43138549-43138617)
chr5 (318-381)||(30754431-30754494)
chr5 (294-377)||(36886974-36887057)
chr5 (293-380)||(12592471-12592558)
chr5 (295-381)||(17643387-17643473)
chr5 (312-377)||(754450-754515)
chr5 (296-366)||(3088048-3088118)
chr5 (296-342)||(34727376-34727422)
chr5 (296-366)||(33709830-33709900)
chr5 (296-381)||(25698719-25698804)
chr5 (294-366)||(41689273-41689345)
chr5 (295-381)||(30140501-30140587)
chr5 (332-366)||(34715632-34715666)
[»] chr3 (20 HSPs)
chr3 (294-366)||(26777867-26777939)
chr3 (295-366)||(4139364-4139435)
chr3 (295-366)||(8393562-8393633)
chr3 (318-381)||(19368943-19369006)
chr3 (295-381)||(11602166-11602252)
chr3 (295-381)||(29530563-29530649)
chr3 (301-366)||(53800504-53800569)
chr3 (331-380)||(11955528-11955577)
chr3 (298-381)||(28981819-28981902)
chr3 (318-380)||(35855226-35855288)
chr3 (331-376)||(22473679-22473724)
chr3 (318-381)||(26102152-26102215)
chr3 (295-381)||(8528105-8528191)
chr3 (316-366)||(18682509-18682559)
chr3 (296-366)||(19895662-19895732)
chr3 (295-341)||(39838225-39838271)
chr3 (318-366)||(22519211-22519259)
chr3 (319-381)||(40831928-40831990)
chr3 (296-366)||(33872205-33872275)
chr3 (331-367)||(15321259-15321295)
[»] chr7 (22 HSPs)
chr7 (295-366)||(688062-688133)
chr7 (295-366)||(4848347-4848418)
chr7 (294-366)||(49146139-49146212)
chr7 (296-380)||(29467751-29467835)
chr7 (312-380)||(24684636-24684704)
chr7 (331-380)||(3791514-3791563)
chr7 (295-367)||(46197415-46197488)
chr7 (301-381)||(29684115-29684195)
chr7 (296-380)||(44804520-44804604)
chr7 (318-381)||(34872191-34872254)
chr7 (326-381)||(35156997-35157052)
chr7 (318-366)||(11840464-11840512)
chr7 (318-366)||(21600987-21601035)
chr7 (293-366)||(9143470-9143546)
chr7 (296-381)||(39651150-39651235)
chr7 (294-366)||(39276611-39276683)
chr7 (310-365)||(31900003-31900058)
chr7 (318-366)||(17169046-17169094)
chr7 (295-366)||(48529950-48530021)
chr7 (302-372)||(42912138-42912208)
chr7 (331-367)||(42684820-42684856)
chr7 (331-367)||(47175506-47175542)
[»] chr6 (13 HSPs)
chr6 (295-366)||(4107953-4108024)
chr6 (295-366)||(6969312-6969383)
chr6 (296-381)||(25529241-25529326)
chr6 (295-366)||(28573845-28573916)
chr6 (318-380)||(4897497-4897559)
chr6 (294-381)||(9737754-9737841)
chr6 (302-372)||(34316957-34317027)
chr6 (307-366)||(9981276-9981335)
chr6 (295-366)||(1218517-1218588)
chr6 (295-366)||(15045563-15045634)
chr6 (295-366)||(24443926-24443997)
chr6 (331-381)||(33328279-33328329)
chr6 (331-381)||(35133209-35133258)
[»] chr2 (15 HSPs)
chr2 (295-380)||(32677186-32677271)
chr2 (302-381)||(19486113-19486192)
chr2 (318-381)||(19486211-19486274)
chr2 (318-380)||(17836989-17837051)
chr2 (331-380)||(9920912-9920961)
chr2 (295-381)||(10876573-10876657)
chr2 (295-366)||(28607220-28607291)
chr2 (293-381)||(10050191-10050279)
chr2 (318-381)||(42781033-42781096)
chr2 (297-366)||(9545792-9545861)
chr2 (318-366)||(2952779-2952827)
chr2 (300-363)||(18096495-18096558)
chr2 (295-381)||(24520865-24520951)
chr2 (296-366)||(4292799-4292869)
chr2 (327-367)||(5250354-5250394)
[»] scaffold0759 (1 HSPs)
scaffold0759 (295-366)||(5908-5979)
[»] chr8 (23 HSPs)
chr8 (294-381)||(36776402-36776489)
chr8 (318-380)||(40587695-40587757)
chr8 (312-380)||(8760717-8760785)
chr8 (312-380)||(25836268-25836336)
chr8 (305-381)||(41972965-41973041)
chr8 (295-366)||(4466437-4466508)
chr8 (318-381)||(25346056-25346119)
chr8 (295-381)||(24053913-24053999)
chr8 (301-366)||(7389203-7389268)
chr8 (301-366)||(25616515-25616580)
chr8 (312-380)||(1942805-1942873)
chr8 (296-366)||(25620731-25620801)
chr8 (312-377)||(8162781-8162846)
chr8 (312-380)||(32844165-32844233)
chr8 (298-381)||(40616096-40616179)
chr8 (295-372)||(19243234-19243311)
chr8 (295-372)||(19316418-19316495)
chr8 (318-381)||(9472174-9472236)
chr8 (334-381)||(42245734-42245781)
chr8 (326-372)||(45435020-45435066)
chr8 (301-372)||(45298263-45298334)
chr8 (319-381)||(44389007-44389069)
chr8 (296-381)||(18378804-18378889)
[»] scaffold0385 (1 HSPs)
scaffold0385 (318-380)||(8303-8365)
[»] scaffold0381 (1 HSPs)
scaffold0381 (312-377)||(9585-9650)
[»] scaffold0009 (2 HSPs)
scaffold0009 (295-380)||(225434-225519)
scaffold0009 (318-381)||(108569-108632)
[»] scaffold0057 (1 HSPs)
scaffold0057 (295-366)||(20596-20667)
[»] scaffold0429 (1 HSPs)
scaffold0429 (295-372)||(12960-13036)
[»] scaffold0045 (1 HSPs)
scaffold0045 (298-376)||(18873-18953)


Alignment Details
Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 38894754 - 38894839
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38894754 atctatatactaataagaaagtaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 38894839  T

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Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 47134703 - 47134789
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  47134703 atctatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttg 47134789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 19322432 - 19322346
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19322432 atctatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtattctacttattggttg 19322346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 296 - 380
Target Start/End: Complemental strand, 33075743 - 33075659
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33075743 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 33075659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 46626389 - 46626326
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46626389 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttg 46626326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 22198995 - 22198910
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||| |||| |||   ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22198995 atctatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataaggggcaatttggtaatctacttattggtt 22198910  T

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Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 380
Target Start/End: Original strand, 1826789 - 1826877
Alignment:
Q  292 gacatctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||| |||| |||  |||||||| |||| |||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  1826789 gacatctatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataaggggcaatttggtaatctatttattggtt 1826877  T

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Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 366
Target Start/End: Original strand, 5426222 - 5426286
Alignment:
Q  302 tactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  5426222 tactaatataacagttaatgtccattgattttaccattttgcccttagaaggggcaatttggtaa 5426286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 16300388 - 16300474
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||| |||| ||| ||||||||| |||| ||||||||||||| ||||||||||||||||||||||  |||| ||||||||    
T  16300388 atctatatacttatattaaaattaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaaattactaattggttg 16300474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 377
Target Start/End: Original strand, 28570741 - 28570806
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattg 377  Q
    |||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  28570741 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 28570806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 29844933 - 29844884
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29844933 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29844884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 10766221 - 10766270
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10766221 tttaccattttgcccctataagggtcaatttggtaatctacttattggtt 10766270  T

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Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 42678374 - 42678458
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||| ||||||||   |||||||  ||| |||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  42678374 tctatatacttatataaaaagaaatgtcccatgaatttaccattttatccctataaggggcaatttgataatctacttattggtt 42678458  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 1367288 - 1367361
Alignment:
Q  293 acatctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  1367288 acatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 1367361  T

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Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 52306068 - 52306154
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||| ||||||||   ||| ||| || | |||||||||||||||||||||||||||||||| |||  |||| ||||||||    
T  52306068 atctatatacttatataaaaagaaatatccctttaatttaccattttgcccctataaggggcaatttgataaattactaattggttg 52306154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 43116050 - 43116119
Alignment:
Q  298 tatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaat 367  Q
    ||||||||||||||||| |  ||||||||||| ||| | ||||||||||||  |||||||||||||||||    
T  43116050 tatatactaatataaaaatacatgtccattgaatttccaattttgcccctaggaggggcaatttggtaat 43116119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 4890097 - 4890168
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||||||| |||| |||||||||||||| |||| ||||||||||||||||    
T  4890097 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctattaggggcaatttggtaa 4890168  T

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Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 17364691 - 17364620
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||| ||| |||| ||||||||||||||||||| ||||||||||||||||    
T  17364691 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaa 17364620  T

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Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 19400733 - 19400816
Alignment:
Q  298 tatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||  ||| |  |||||| |||| ||||||||||||||| ||||||||| |||| ||||||||| | ||||||||    
T  19400733 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccatataaggggtaattcggtaatctattaattggttg 19400816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 29188388 - 29188317
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| | ||||||||||||||    
T  29188388 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaa 29188317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 33359699 - 33359770
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| | ||||||||||||||    
T  33359699 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaa 33359770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 50557862 - 50557911
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  50557862 tttaccattttgtcc-tataaggggcaatttggtaatctactaattggttg 50557911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 41918992 - 41918924
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggt 364  Q
    ||||||||||||||||||| |  ||||||||||| ||| | ||||||||||||  || |||||||||||    
T  41918992 tctatatactaatataaaaatatatgtccattgaatttccaattttgcccctaggagtggcaatttggt 41918924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 10698206 - 10698135
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||| |||| ||||||   |||||||| | | |||||||||||||||||| |||||||| ||||||||    
T  10698206 atctatatgctaacataaaaagaaatgtccaataaatttaccattttgcccctagaaggggcattttggtaa 10698135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 51971356 - 51971274
Alignment:
Q  298 tatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||  ||| || |||||| ||||  ||||||||||| |||||||| ||| |||||||||||||| | ||||||||    
T  51971356 tatatactaataagaaaattcatgtcccttgaagttaccattttgtccctataa-gggtaatttggtaatctattaattggttg 51971274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 62061 - 62132
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  62061 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 62132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 12682843 - 12682772
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12682843 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 12682772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 13171627 - 13171710
Alignment:
Q  298 tatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||  ||| | ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13171627 tatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttg 13171710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 3757725 - 3757811
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  |||   ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3757725 atctatatactaataagaaaagaaatgttcattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttg 3757811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 50120045 - 50119959
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  |||   ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50120045 atctatatactaataagaaaaggaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttg 50119959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 46104184 - 46104249
Alignment:
Q  301 atactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  46104184 atactaatataaaagttaatgtccattgattttaccattttgccccaatgaggggcaatttggtaa 46104249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 8956932 - 8957000
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8956932 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8957000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 8986904 - 8986972
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8986904 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8986972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 37349802 - 37349870
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37349802 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 37349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 2116088 - 2116159
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||    
T  2116088 atctatatactaatataaaagttaatgtccattgattttaccattttgtccttaggaggggcaatttggtaa 2116159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 35833488 - 35833429
Alignment:
Q  308 tataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaat 367  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35833488 tataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaat 35833429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 51347487 - 51347573
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  |||   ||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51347487 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctatttattggttg 51347573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 24948374 - 24948289
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||| ||||||||   ||||||| |||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  24948374 atctatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataaggggcaatttggaaatctacttattggtt 24948289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 381
Target Start/End: Complemental strand, 30529335 - 30529280
Alignment:
Q  326 ttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30529335 ttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttg 30529280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 3821286 - 3821200
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||| |||| |||  |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  3821286 atctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttg 3821200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 9888960 - 9888895
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattg 377  Q
    |||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  9888960 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 9888895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 39406319 - 39406234
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||| ||||||||   ||||| | |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  39406319 atctatatacttatataaaaagaaatgttccttgaatttaccatttagcccctataaggggtaatttggtaatctacttattggtt 39406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 53991603 - 53991554
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53991603 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 53991554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 380
Target Start/End: Original strand, 29712366 - 29712454
Alignment:
Q  293 acatctatatactaatat-aaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||||| |||| ||||   ||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29712366 acatctatatacttatattaaaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 29712454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 381
Target Start/End: Complemental strand, 36743291 - 36743203
Alignment:
Q  293 acatctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||||  |||   ||||||| || | |||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  36743291 acatctatatactaataagaaaagaaatgtcccttaaatttaccattttgtctctataaggggcaatttggtaatctacttattggttg 36743203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 24547353 - 24547416
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  24547353 aatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggttg 24547416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 20588561 - 20588647
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  |||   ||||||| |||| || ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  20588561 atctatatactaataagaaaagaaatgtcccttgaattcaccattttgcctctataaggggcaatttggtaatccacttattggttg 20588647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 578656 - 578607
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  578656 tttaccattttgcccctataagggacaatttggtaatctacttattggtt 578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 376
Target Start/End: Complemental strand, 35716350 - 35716305
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttatt 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  35716350 tttaccattttgcccctataaggggcaatttggtaatctacttatt 35716305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 50033697 - 50033764
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  50033697 aaagttaatgtcctatgaatttaccattttgcccttataaggg-caatttggtaatctacttattggtt 50033764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 17730463 - 17730518
Alignment:
Q  326 ttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  17730463 ttgaatttaccattttgctcctataaggggcaatttggtaatctactaattggttg 17730518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 5752471 - 5752521
Alignment:
Q  316 ttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  5752471 ttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 5752521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 39716805 - 39716719
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||||||||||||||  || ||||||||||    
T  39716805 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttg 39716719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 381
Target Start/End: Original strand, 15704115 - 15704196
Alignment:
Q  300 tatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||| ||||||||  |||||| | || | ||||||||||||||||||||||||| ||||||||||  |||| ||||||||    
T  15704115 tatacttatataaaaagtaatgttctttaaatttaccattttgcccctataaggggaaatttggtaaattactaattggttg 15704196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 35498619 - 35498534
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||||||   |||| || |||| |||| |||||||||||||||| || |||||||||||  |||| ||||||||    
T  35498619 tctatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataaaggacaatttggtaaattactaattggttg 35498534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 43021891 - 43021976
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||||  |||   ||||| | |||| |||||||| ||||| |||| ||| ||||||||||||||||||||||||||    
T  43021891 atctatatactaataagaaaagaaatgttccttgaatttaccatcttgcctctattaggtgcaatttggtaatctacttattggtt 43021976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 16896008 - 16896070
Alignment:
Q  319 atgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||| |||| ||||| ||||||||| |||||||||| ||||||||||||| | ||||||||    
T  16896008 atgtcccttgaatttacaattttgcccttataaggggctatttggtaatctattaattggttg 16896070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 47560305 - 47560251
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctata 350  Q
    |||||||||| |||| |||  |||||||| |||| ||||||||||||||||||||    
T  47560305 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctata 47560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 52799047 - 52799095
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||| || | ||||||||||| ||||||| ||||||||||||||||    
T  52799047 aatgtcctttaaatttaccattttacccctattaggggcaatttggtaa 52799095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 381
Target Start/End: Complemental strand, 12422426 - 12422346
Alignment:
Q  301 atactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12422426 atactaatataaaaattcatgtcctttgattttaccattttgcccctataaggggcaatttggtaatctactaattggttg 12422346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 6305520 - 6305452
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6305520 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 6305452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 381
Target Start/End: Complemental strand, 42977913 - 42977834
Alignment:
Q  299 atatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| |||||||||  |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42977913 atatacttatataaaagaaaatgtccattg---ttaccattttgcccctataaggggcaatttggtaatctacttattggttg 42977834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 43138617 - 43138549
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43138617 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 43138549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 30754431 - 30754494
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30754431 aatgtcctttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttg 30754494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 36887057 - 36886974
Alignment:
Q  294 catctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattg 377  Q
    ||||||||||||||||  |||   ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36887057 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattg 36886974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 12592558 - 12592471
Alignment:
Q  293 acatctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||||| ||||||||   |||||||  ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  12592558 acatctatatacttatataaaaagaaatgtcccatgaatttaccagtttacccctataaggggcaatttggtaatctacttattggtt 12592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 17643473 - 17643387
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  ||| | ||||||| |||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  17643473 atctatatactaataagaaaataaatgtcccttgaatttatcattttgcccttataaggggcaatttggtaatctatttattggttg 17643387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 754515 - 754450
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattg 377  Q
    |||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  754515 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 754450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 3088118 - 3088048
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||| |||| |||  |||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  3088118 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 3088048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 342
Target Start/End: Complemental strand, 34727422 - 34727376
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttg 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34727422 tctatatactaatataaaagttaatgtccattgattttaccattttg 34727376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 33709900 - 33709830
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||| |||| ||| ||||||||| |||| ||||||||||| ||||||||| ||||||||||||||    
T  33709900 tctatatacttatattaaaattaatgtcccttgaatttaccattttacccctataaagggcaatttggtaa 33709830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 25698804 - 25698719
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||||||||||||||  || ||||||||||    
T  25698804 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttg 25698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 41689273 - 41689345
Alignment:
Q  294 catctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| | ||||||||||||||    
T  41689273 catctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattatgggcaatttggtaa 41689345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 30140501 - 30140587
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| | ||| ||||||||||  |||| ||||||||    
T  30140501 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggtaatttggtaaattactaattggttg 30140587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 366
Target Start/End: Original strand, 34715632 - 34715666
Alignment:
Q  332 ttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||| ||||||||||||||||    
T  34715632 ttaccattttgcccctattaggggcaatttggtaa 34715666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 26777939 - 26777867
Alignment:
Q  294 catctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  26777939 catctatatactaatataaaagttaacgtccattgattttaccattttgcccctatgaggggcaatttggtaa 26777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 4139435 - 4139364
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  4139435 atctatatactaatataaaagttaatgtccattgattttaccattttgtccctattaggggcaatttggtaa 4139364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 8393562 - 8393633
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  8393562 atctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 8393633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 19369006 - 19368943
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19369006 aatgtcccttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 19368943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 11602252 - 11602166
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||  |||||||| | ||||||||    
T  11602252 atctatatactaatataaaaatccatgtccgttgattttaccattttgcccctataaggggcaattcagtaatctattaattggttg 11602166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 29530649 - 29530563
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  |||   ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29530649 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctacttattggttg 29530563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 53800504 - 53800569
Alignment:
Q  301 atactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  53800504 atactaatataaaagttaatgtccattgattttaccattttgcccttaggaggggcaatttggtaa 53800569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 11955577 - 11955528
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11955577 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 11955528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 28981902 - 28981819
Alignment:
Q  298 tatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||  ||| |  |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  28981902 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatcaactaattggttg 28981819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 35855226 - 35855288
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35855226 aatgtcccttaaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 35855288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 376
Target Start/End: Original strand, 22473679 - 22473724
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttatt 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22473679 tttaccattttgcccctataaggggcaatttggtaatctacttatt 22473724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 26102215 - 26102152
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| |||| |||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  26102215 aatgtcctttgaatttaccattttgcccctataagaggtaatttggtaatctgcttattggttg 26102152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 8528191 - 8528105
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||| || |||||||||||||||||||||||| || ||||||||||    
T  8528191 atctatatactaataagaaaagaaatgtcccttgaatttaccattctgtccctataaggggcaatttggtaatatatttattggttg 8528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 18682509 - 18682559
Alignment:
Q  316 ttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  18682509 ttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 18682559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 19895732 - 19895662
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||| ||||| |||  |||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  19895732 tctatatacttatatagaagaaaatgtccattgaatttaccattttgcccttataaagggcaatttggtaa 19895662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 39838271 - 39838225
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccatttt 341  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  39838271 atctatatactaatataaaagttaatgtccgttgattttaccatttt 39838225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 22519211 - 22519259
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  22519211 aatgtccattgaatttaccattttgcccctataaggggcaatttagtaa 22519259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 381
Target Start/End: Complemental strand, 40831990 - 40831928
Alignment:
Q  319 atgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||| |||| ||||||||||||| |||||||||| ||||| ||||||||||| ||||||||    
T  40831990 atgtcccttgaatttaccattttgctcctataagggacaattcggtaatctactaattggttg 40831928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 366
Target Start/End: Original strand, 33872205 - 33872275
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||   |||||||  ||| |||||||||||| ||||| ||||| || ||||||||    
T  33872205 tctatatactaatataaaaagaaatgtccgatgaatttaccattttgtccctagaagggccattttggtaa 33872275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 15321295 - 15321259
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaat 367  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  15321295 tttacaattttgcccctataaggggcaatttagtaat 15321259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 688062 - 688133
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  688062 atctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 688133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 4848347 - 4848418
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  4848347 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggtaatttggtaa 4848418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 49146212 - 49146139
Alignment:
Q  294 catctatatactaatataaaa-gttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49146212 catctatatactaatataaaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 49146139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 29467751 - 29467835
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29467751 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 24684704 - 24684636
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24684704 aaagttaatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 24684636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 3791514 - 3791563
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3791514 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 3791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 46197415 - 46197488
Alignment:
Q  295 atctatatactaa-tataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaat 367  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||    
T  46197415 atctatatactaaatataaaagttaatgtccattgattttaccattttgcccttaggagaggcaatttggtaat 46197488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 301 - 381
Target Start/End: Complemental strand, 29684195 - 29684115
Alignment:
Q  301 atactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||||   ||||| | |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  29684195 atactaatataaaaagaaatgtgccttgaatttaccattttacccctataaggggcaatttggtaatctactaattggttg 29684115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 44804520 - 44804604
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||||||  |||   ||||||| |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  44804520 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggtt 44804604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 34872191 - 34872254
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34872191 aatgtcctttgaacttaccattttgtccctataaggggcaatttggtaatctacttattggttg 34872254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 381
Target Start/End: Complemental strand, 35157052 - 35156997
Alignment:
Q  326 ttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35157052 ttgaatttaccattttgcccctataaggggcaatttggtaatctacttatcggttg 35156997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 11840512 - 11840464
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11840512 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 11840464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 21601035 - 21600987
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21601035 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 21600987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 9143470 - 9143546
Alignment:
Q  293 acatctatatactaatataaaagt---taatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||     |||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  9143470 acatctatatactaatataaaaagaaataatatcccttgaatttaccattttgcccctataaggggcaatttggtaa 9143546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 39651235 - 39651150
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||||||||||||||  |||| ||||||||    
T  39651235 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattactaattggttg 39651150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 39276611 - 39276683
Alignment:
Q  294 catctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  39276611 catctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaa 39276683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 365
Target Start/End: Complemental strand, 31900058 - 31900003
Alignment:
Q  310 taaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggta 365  Q
    |||||| |||||||| |||| ||||| ||||||||||||| |||||||||||||||    
T  31900058 taaaaggtaatgtcctttgaatttacaattttgcccctattaggggcaatttggta 31900003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 17169046 - 17169094
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||| |||| ||||||||||||||||||| | ||||||||||||||    
T  17169046 aatgtcctttgaatttaccattttgcccctattaagggcaatttggtaa 17169094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 48530021 - 48529950
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||||||| ||||  ||||||||||||||||||  |||||||||||||||    
T  48530021 atctatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctattgggggcaatttggtaa 48529950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 372
Target Start/End: Original strand, 42912138 - 42912208
Alignment:
Q  302 tactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctact 372  Q
    ||||| |||||||  | |||||||||||||||||| |||||||| ||  |||||||||||| |||| ||||    
T  42912138 tactagtataaaaagtgatgtccattgattttacctttttgcccttaagaggggcaatttgctaatttact 42912208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 367
Target Start/End: Original strand, 42684820 - 42684856
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaat 367  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  42684820 tttaccattttgcccctataaggggcattttagtaat 42684856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 47175542 - 47175506
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaat 367  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  47175542 tttacaattttgcccctagaaggggcaatttggtaat 47175506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 4107953 - 4108024
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  4107953 atctatatactaatataaaagttaatgtccattgattttaccatttttcccctatgaggggcaatttggtaa 4108024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 6969383 - 6969312
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6969383 atctatatactaatataaaagttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 6969312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 25529241 - 25529326
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||||||||| |  |||||| ||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||    
T  25529241 tctatatactaatataaaaatccatgtccgttgcttttacgattttgctcctataaggggcaatttggtaatctactaattggttg 25529326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 28573916 - 28573845
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||    
T  28573916 atctatatactgatataaaagttaatatcctttgattttaccattttgcccctaggaggggcaatttggtaa 28573845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 318 - 380
Target Start/End: Complemental strand, 4897559 - 4897497
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4897559 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 4897497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 381
Target Start/End: Complemental strand, 9737841 - 9737754
Alignment:
Q  294 catctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||||||  |||   ||||||| |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  9737841 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttgataatctatttattggttg 9737754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 372
Target Start/End: Original strand, 34316957 - 34317027
Alignment:
Q  302 tactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctact 372  Q
    |||||||||||||  | |||||||||||||||||| |||||||||||  ||||||||||||||||| ||||    
T  34316957 tactaatataaaaagtgatgtccattgattttacctttttgcccctaagaggggcaatttggtaatttact 34317027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 366
Target Start/End: Complemental strand, 9981335 - 9981276
Alignment:
Q  307 atataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||  ||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  9981335 atataaaaggaaatgttcattgaatttaccattttacccctataaggggcaatttggtaa 9981276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 1218517 - 1218588
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| | ||||||||||||||    
T  1218517 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaa 1218588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 15045634 - 15045563
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  15045634 atctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaa 15045563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 24443926 - 24443997
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||| ||| |||| ||||||||||||||||||| ||||||||||||||||    
T  24443926 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaa 24443997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 33328329 - 33328279
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||| |||| |||||||||||||||| |||||| ||||||||    
T  33328329 tttaccattttgctcctacaaggggcaatttggtagtctactaattggttg 33328279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 35133209 - 35133258
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||| |||||| |||||||||| ||||||||| ||||||||    
T  35133209 tttaccattttgcctctataa-gggcaatttgataatctactaattggttg 35133258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 32677271 - 32677186
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||| |||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32677271 atctatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 32677186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 19486192 - 19486113
Alignment:
Q  302 tactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||| |||||||||  ||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19486192 tacttatataaaagaaaatatccattgaatttatcattttgcccctataaggggcaatttggtaatctacttattggttg 19486113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 19486211 - 19486274
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19486211 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttg 19486274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 17836989 - 17837051
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17836989 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 17837051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 9920961 - 9920912
Alignment:
Q  331 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9920961 tttaccattttgcccctataaggggcaatttggtaatctacttattggtt 9920912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 10876657 - 10876573
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  10876657 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgccccta--aggggcaatttggtaatctacttattggttg 10876573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 28607220 - 28607291
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| ||| | |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  28607220 atctatatacttatattaaaataaatgtccattgaatttaccattttgtccctataaggggcaatttggtaa 28607291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 381
Target Start/End: Complemental strand, 10050279 - 10050191
Alignment:
Q  293 acatctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||| ||||||||    
T  10050279 acatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttgataaattactaattggttg 10050191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 42781033 - 42781096
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| |||| |||| ||||||| |||| |||||||||||||||||||||| ||||||||||    
T  42781033 aatgtcccttgaatttatcattttgtccctgtaaggggcaatttggtaatctatttattggttg 42781096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 9545861 - 9545792
Alignment:
Q  297 ctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  9545861 ctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 9545792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 2952779 - 2952827
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  2952779 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 2952827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 18096495 - 18096558
Alignment:
Q  300 tatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttgg 363  Q
    |||||| ||||||||   ||||||| |||| ||||||||||||||||||||||||| |||||||    
T  18096495 tatacttatataaaaagaaatgtcctttgaatttaccattttgcccctataaggggtaatttgg 18096558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 24520865 - 24520951
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||| ||||||||   ||||||| |||| ||||  |||||||| |||||||| ||||||||||||  |||| ||||||||    
T  24520865 atctatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataaggagcaatttggtaaattactaattggttg 24520951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 4292869 - 4292799
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||| ||||| | ||||||||||||||    
T  4292869 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctattaagggcaatttggtaa 4292799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 5250354 - 5250394
Alignment:
Q  327 tgattttaccattttgcccctataaggggcaatttggtaat 367  Q
    |||||||||||||||||||||| |||||||| ||| |||||    
T  5250354 tgattttaccattttgcccctaaaaggggcatttttgtaat 5250394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 5979 - 5908
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  5979 atctatatactaatataaaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 5908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 381
Target Start/End: Original strand, 36776402 - 36776489
Alignment:
Q  294 catctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||||||  |||   ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36776402 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttg 36776489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 318 - 380
Target Start/End: Complemental strand, 40587757 - 40587695
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40587757 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 40587695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 8760717 - 8760785
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8760717 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8760785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 25836336 - 25836268
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25836336 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 25836268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 41972965 - 41973041
Alignment:
Q  305 taatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||| | ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41972965 taatataaaattaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctactaattggttg 41973041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 4466508 - 4466437
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||    
T  4466508 atctatatactaatataaaagttaatgtccattgattttaccattttacccttaggaggggcaatttggtaa 4466437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 25346056 - 25346119
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25346056 aatgtccattgaatttaccattttgcctctataaggggcaatttggtaatctacttattggttg 25346119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 24053913 - 24053999
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24053913 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctacttattggttg 24053999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 7389203 - 7389268
Alignment:
Q  301 atactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  7389203 atactaatataaaagttaatgtccattgattttaccattttgccccaaggaggggcaatttggtaa 7389268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 25616580 - 25616515
Alignment:
Q  301 atactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  25616580 atactaatataaaagttaatgtccattgattttaccattttgcccttaagaggggcaatttggtaa 25616515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 1942805 - 1942873
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1942805 aaagttaatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 1942873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 25620801 - 25620731
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    |||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  25620801 tctatacactgatataaaagttcatgtccattgattttactattttgcccctatgaggggcaatttggtaa 25620731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 8162846 - 8162781
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattg 377  Q
    |||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  8162846 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 8162781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 32844165 - 32844233
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||||||||  | | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32844165 aaagttaatgtcccataaatttaccattttgccccgataaggggcaatttggtaatctacttattggtt 32844233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 40616179 - 40616096
Alignment:
Q  298 tatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||||||||  ||| |  |||||| |||| ||||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  40616179 tatatactaataagaaaatccatgtcccttgaatttaccattttgctcctataagaggcaatttggtaatctactaattggttg 40616096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 19243234 - 19243311
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctact 372  Q
    ||||||||||||||||||||  | |||||  ||||||||||| |||||||||| | ||||||||||||||||| ||||    
T  19243234 atctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaatttact 19243311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 19316418 - 19316495
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctact 372  Q
    ||||||||||||||||||||  | |||||  ||||||||||| |||||||||| | ||||||||||||||||| ||||    
T  19316418 atctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaatttact 19316495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 9472174 - 9472236
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| ||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  9472174 aatgtcccttgaaattaccattttgcctctataaggg-caatttggtaatctacttattggttg 9472236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 42245781 - 42245734
Alignment:
Q  334 accattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  42245781 accattttgcccctataaggggtaatttgataatctacttattggttg 42245734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 372
Target Start/End: Original strand, 45435020 - 45435066
Alignment:
Q  326 ttgattttaccattttgcccctataaggggcaatttggtaatctact 372  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||    
T  45435020 ttgaatttaccattttgcccttataaggggcaatttggtaatctact 45435066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 372
Target Start/End: Complemental strand, 45298334 - 45298263
Alignment:
Q  301 atactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctact 372  Q
    ||||||||||||||  | |||| ||||||||||||| |||| ||||||  ||||||||||||||||| ||||    
T  45298334 atactaatataaaaaatgatgtacattgattttacctttttacccctaagaggggcaatttggtaatttact 45298263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 381
Target Start/End: Complemental strand, 44389069 - 44389007
Alignment:
Q  319 atgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||| |||| ||||||||||| ||| ||||||||| |||||||||||||| | ||||||||    
T  44389069 atgtcccttgaatttaccatttttcccttataaggggtaatttggtaatctattaattggttg 44389007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 18378889 - 18378804
Alignment:
Q  296 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    |||||||||| |||| |||   ||||||| |||| |||| ||||||||| |||| ||||||||||||||||  || ||||||||||    
T  18378889 tctatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctattaggggcaatttggtaaattaattattggttg 18378804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 318 - 380
Target Start/End: Complemental strand, 8365 - 8303
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8365 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 377
Target Start/End: Original strand, 9585 - 9650
Alignment:
Q  312 aaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattg 377  Q
    |||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  9585 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 9650  T

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Target: scaffold0009 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 225434 - 225519
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggtt 380  Q
    ||||||||||| |||| |||   |||||||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||    
T  225434 atctatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggtt 225519  T

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Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 108569 - 108632
Alignment:
Q  318 aatgtccattgattttaccattttgcccctataaggggcaatttggtaatctacttattggttg 381  Q
    ||||||| |||| |||||||||||| ||| |||||||| ||||||||||||||| |||||||||    
T  108569 aatgtcccttgaatttaccattttgtccccataaggggtaatttggtaatctacgtattggttg 108632  T

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Target: scaffold0057 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 20667 - 20596
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaa 366  Q
    ||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  20667 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 20596  T

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Target: scaffold0429 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 12960 - 13036
Alignment:
Q  295 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctataaggggcaatttggtaatctact 372  Q
    ||||||||||||||||| ||  | ||||| |||||||||||| |||||||||||  ||||||||||||||||| ||||    
T  12960 atctatatactaatatagaaagtgatgtcaattgattttacc-ttttgcccctaagaggggcaatttggtaatttact 13036  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 18953 - 18873
Alignment:
Q  298 tatatactaatataaaagttaatgtccattgattttaccattttgcccctataa--ggggcaatttggtaatctacttatt 376  Q
    ||||||||| ||||||| |  |||||||||||||||| |||||||||||||  |  |||| | ||||||||||||||||||    
T  18953 tatatactattataaaaatacatgtccattgattttatcattttgcccctaggaggggggtattttggtaatctacttatt 18873  T

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