View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21475_high_8 (Length: 333)
Name: NF21475_high_8
Description: NF21475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21475_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 29 - 332
Target Start/End: Complemental strand, 53672383 - 53672080
Alignment:
| Q |
29 |
tatggagttggaaagagttggagaatcccaaagttcacttctgatgaattggatgattactctatgatttttgggtatgatgtcccctcagacatatctc |
128 |
Q |
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| T |
53672383 |
tatgaagttggaaagagttggagaatcccaaagttcacttctgatgaattggatgattactctatgatttttgggtatgatgtcccctcagacatatctc |
53672284 |
T |
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| Q |
129 |
tagaggattatttgtgaggatgaaaagtagattagtttcaaagtttgttggcatatacaatatttgaggtttcagagaggagtatgttgtaatgaagttg |
228 |
Q |
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| T |
53672283 |
tagaggattatttgtgaggatgaaaagtagattagtttcaaagtttgttggcatatacaatatttgaggtttcagagaggagtatgttgtaatgaagttg |
53672184 |
T |
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| Q |
229 |
aagattacaagttggctgattatttttgtaacttaataacatatgagaatgttagaatatgaaagcatgagaacaattaatcttcacaatggatggatgg |
328 |
Q |
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| T |
53672183 |
aagattagaagttggctgattatttttgtaacttaataacatatgagaatgttagaatatgaaagcatgagaacaattaatcttcacaatggatggatgg |
53672084 |
T |
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| Q |
329 |
ttaa |
332 |
Q |
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|||| |
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| T |
53672083 |
ttaa |
53672080 |
T |
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