View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21478_low_3 (Length: 647)

Name: NF21478_low_3
Description: NF21478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21478_low_3
NF21478_low_3
[»] chr8 (31 HSPs)
chr8 (388-630)||(2019414-2019655)
chr8 (1-174)||(2019988-2020161)
chr8 (43-172)||(1947165-1947291)
chr8 (232-351)||(2019839-2019958)
chr8 (388-469)||(32975757-32975838)
chr8 (480-584)||(2049156-2049268)
chr8 (388-469)||(25465782-25465863)
chr8 (389-450)||(8752877-8752938)
chr8 (416-469)||(28879153-28879206)
chr8 (389-469)||(10213766-10213846)
chr8 (388-469)||(25333636-25333717)
chr8 (421-469)||(9131063-9131111)
chr8 (389-469)||(10298862-10298941)
chr8 (414-469)||(32131536-32131591)
chr8 (414-469)||(32212950-32213005)
chr8 (415-469)||(34286499-34286553)
chr8 (416-469)||(24350454-24350507)
chr8 (421-469)||(2669751-2669799)
chr8 (421-469)||(25671825-25671873)
chr8 (421-469)||(30974092-30974140)
chr8 (506-576)||(2036411-2036481)
chr8 (421-468)||(24087274-24087321)
chr8 (414-469)||(28280805-28280860)
chr8 (415-453)||(16706051-16706089)
chr8 (428-469)||(13131553-13131594)
chr8 (416-469)||(14942522-14942575)
chr8 (392-469)||(42102180-42102257)
chr8 (421-453)||(9130968-9131000)
chr8 (421-469)||(12607182-12607230)
chr8 (421-469)||(35055525-35055572)
chr8 (421-453)||(36907595-36907627)
[»] chr5 (42 HSPs)
chr5 (389-469)||(11912037-11912117)
chr5 (389-467)||(5559856-5559934)
chr5 (389-469)||(28625551-28625631)
chr5 (389-469)||(40697077-40697157)
chr5 (414-469)||(6125382-6125437)
chr5 (414-465)||(24030310-24030361)
chr5 (414-469)||(41125770-41125825)
chr5 (420-469)||(13739331-13739380)
chr5 (414-467)||(39154698-39154751)
chr5 (413-469)||(15167649-15167705)
chr5 (421-469)||(29922124-29922172)
chr5 (383-465)||(589217-589300)
chr5 (414-453)||(13060553-13060592)
chr5 (414-453)||(35083335-35083374)
chr5 (390-469)||(40152811-40152890)
chr5 (414-469)||(40452412-40452467)
chr5 (414-453)||(41059740-41059779)
chr5 (423-469)||(33924717-33924763)
chr5 (388-453)||(7364260-7364325)
chr5 (389-469)||(12467336-12467419)
chr5 (414-466)||(1943091-1943143)
chr5 (414-469)||(10537161-10537217)
chr5 (421-453)||(15364104-15364136)
chr5 (421-453)||(29136777-29136809)
chr5 (389-469)||(35536916-35536995)
chr5 (390-450)||(43268590-43268650)
chr5 (414-469)||(2577363-2577418)
chr5 (422-453)||(3977577-3977608)
chr5 (414-469)||(14243921-14243976)
chr5 (414-453)||(17657338-17657377)
chr5 (414-469)||(29659156-29659211)
chr5 (414-453)||(42852117-42852156)
chr5 (415-469)||(6144835-6144889)
chr5 (421-451)||(11163235-11163265)
chr5 (416-469)||(3520442-3520495)
chr5 (421-450)||(9251712-9251741)
chr5 (414-451)||(11991400-11991437)
chr5 (428-469)||(42558652-42558693)
chr5 (414-450)||(7364121-7364157)
chr5 (421-469)||(17868139-17868187)
chr5 (421-465)||(27806018-27806062)
chr5 (421-453)||(28357244-28357276)
[»] chr4 (39 HSPs)
chr4 (389-469)||(29877710-29877790)
chr4 (389-469)||(48591359-48591439)
chr4 (421-469)||(8130582-8130630)
chr4 (389-469)||(18630830-18630910)
chr4 (389-469)||(23297506-23297586)
chr4 (416-468)||(48667768-48667820)
chr4 (414-469)||(34526272-34526327)
chr4 (414-469)||(36254971-36255026)
chr4 (419-469)||(38876057-38876107)
chr4 (389-466)||(22273851-22273928)
chr4 (415-467)||(11256598-11256650)
chr4 (414-465)||(488323-488374)
chr4 (418-469)||(4331430-4331481)
chr4 (414-465)||(9153521-9153572)
chr4 (390-469)||(18424213-18424292)
chr4 (426-469)||(35405791-35405834)
chr4 (414-469)||(36741000-36741055)
chr4 (388-451)||(48721890-48721953)
chr4 (414-452)||(34633486-34633524)
chr4 (416-469)||(17222927-17222980)
chr4 (416-465)||(38345761-38345810)
chr4 (416-469)||(41229001-41229054)
chr4 (423-464)||(42153102-42153143)
chr4 (421-469)||(3564309-3564357)
chr4 (416-464)||(7148870-7148918)
chr4 (421-453)||(42611820-42611852)
chr4 (421-465)||(43699388-43699432)
chr4 (414-469)||(12495579-12495634)
chr4 (388-467)||(43213452-43213530)
chr4 (390-452)||(36298404-36298466)
chr4 (414-464)||(48687030-48687080)
chr4 (424-469)||(28074470-28074515)
chr4 (412-469)||(28663666-28663723)
chr4 (421-453)||(825785-825817)
chr4 (421-469)||(897073-897121)
chr4 (421-453)||(2702666-2702698)
chr4 (405-453)||(24101891-24101939)
chr4 (421-469)||(30956787-30956835)
chr4 (389-469)||(46704205-46704285)
[»] chr2 (29 HSPs)
chr2 (389-469)||(4026996-4027076)
chr2 (388-469)||(21788527-21788608)
chr2 (421-469)||(8832560-8832608)
chr2 (389-467)||(36501452-36501530)
chr2 (421-469)||(37420009-37420057)
chr2 (414-466)||(38216115-38216167)
chr2 (413-468)||(5903633-5903688)
chr2 (414-469)||(25836648-25836702)
chr2 (423-469)||(755646-755692)
chr2 (421-469)||(4533425-4533473)
chr2 (416-467)||(887510-887561)
chr2 (414-465)||(1120381-1120432)
chr2 (390-457)||(10574108-10574175)
chr2 (414-452)||(29774841-29774879)
chr2 (390-467)||(736036-736113)
chr2 (416-453)||(7480850-7480887)
chr2 (283-340)||(27679386-27679443)
chr2 (416-453)||(42064949-42064986)
chr2 (421-466)||(42839259-42839304)
chr2 (421-470)||(45163819-45163868)
chr2 (432-468)||(5903729-5903765)
chr2 (389-465)||(11777055-11777131)
chr2 (421-469)||(12442905-12442953)
chr2 (421-453)||(12950066-12950098)
chr2 (413-469)||(15155908-15155964)
chr2 (413-453)||(23956215-23956255)
chr2 (389-469)||(33321247-33321327)
chr2 (414-450)||(35235201-35235237)
chr2 (414-469)||(39592345-39592398)
[»] chr1 (39 HSPs)
chr1 (389-469)||(48819370-48819450)
chr1 (390-469)||(9572719-9572798)
chr1 (389-469)||(28690075-28690155)
chr1 (389-469)||(37329347-37329427)
chr1 (414-469)||(28870299-28870354)
chr1 (388-469)||(13039017-13039098)
chr1 (421-469)||(47413475-47413523)
chr1 (414-453)||(16888917-16888956)
chr1 (414-469)||(31249778-31249833)
chr1 (419-469)||(1565310-1565359)
chr1 (389-463)||(6337697-6337771)
chr1 (416-466)||(37712165-37712215)
chr1 (420-469)||(6900549-6900598)
chr1 (388-469)||(36422916-36422997)
chr1 (388-469)||(46689485-46689566)
chr1 (389-469)||(15515282-15515362)
chr1 (421-469)||(26988251-26988299)
chr1 (389-469)||(41196645-41196725)
chr1 (421-469)||(42367053-42367101)
chr1 (415-469)||(391272-391327)
chr1 (414-449)||(3069809-3069844)
chr1 (414-469)||(4068211-4068266)
chr1 (426-469)||(10365278-10365321)
chr1 (414-453)||(22593358-22593397)
chr1 (418-469)||(35897554-35897605)
chr1 (421-468)||(37431237-37431284)
chr1 (414-453)||(38781174-38781213)
chr1 (414-469)||(45334934-45334989)
chr1 (387-469)||(1005409-1005491)
chr1 (431-464)||(4068112-4068145)
chr1 (414-451)||(10082347-10082384)
chr1 (392-469)||(15791457-15791534)
chr1 (417-470)||(39658257-39658310)
chr1 (388-453)||(46473164-46473229)
chr1 (421-469)||(10850001-10850049)
chr1 (421-469)||(19220276-19220324)
chr1 (425-453)||(23544898-23544926)
chr1 (421-453)||(37156871-37156903)
chr1 (421-465)||(46500939-46500983)
[»] chr7 (29 HSPs)
chr7 (414-469)||(33204930-33204985)
chr7 (420-469)||(26331867-26331916)
chr7 (416-469)||(29390486-29390539)
chr7 (416-469)||(29378743-29378796)
chr7 (416-469)||(44613408-44613461)
chr7 (414-465)||(34923029-34923080)
chr7 (414-469)||(38372654-38372709)
chr7 (422-469)||(39279534-39279581)
chr7 (415-469)||(37465821-37465875)
chr7 (416-469)||(1401171-1401224)
chr7 (413-453)||(9534033-9534073)
chr7 (421-453)||(30181653-30181685)
chr7 (414-469)||(991595-991650)
chr7 (414-469)||(14691234-14691289)
chr7 (390-453)||(14691250-14691313)
chr7 (390-469)||(25908366-25908445)
chr7 (421-468)||(30094665-30094712)
chr7 (414-469)||(43818813-43818868)
chr7 (414-469)||(47654349-47654404)
chr7 (414-453)||(49104319-49104358)
chr7 (419-469)||(25655666-25655716)
chr7 (420-469)||(35809192-35809241)
chr7 (421-469)||(8180526-8180574)
chr7 (421-469)||(20888677-20888725)
chr7 (421-465)||(28004686-28004730)
chr7 (418-469)||(32848630-32848682)
chr7 (421-469)||(33288010-33288058)
chr7 (421-469)||(44834918-44834966)
chr7 (414-450)||(46744049-46744085)
[»] chr6 (23 HSPs)
chr6 (414-469)||(35071363-35071418)
chr6 (414-469)||(6752908-6752963)
chr6 (414-469)||(23239343-23239398)
chr6 (414-464)||(3210929-3210979)
chr6 (389-469)||(2027111-2027191)
chr6 (388-470)||(3829848-3829935)
chr6 (414-453)||(9201672-9201711)
chr6 (416-467)||(10755220-10755271)
chr6 (414-469)||(32675824-32675879)
chr6 (423-469)||(12816836-12816882)
chr6 (416-469)||(21891273-21891326)
chr6 (389-465)||(2255805-2255881)
chr6 (388-467)||(6758697-6758777)
chr6 (421-469)||(9202334-9202382)
chr6 (421-469)||(9764326-9764374)
chr6 (421-453)||(10874087-10874119)
chr6 (414-453)||(7267878-7267917)
chr6 (426-465)||(12817047-12817086)
chr6 (426-465)||(21025158-21025197)
chr6 (414-469)||(29623413-29623467)
chr6 (421-469)||(2034164-2034212)
chr6 (416-468)||(2040117-2040169)
chr6 (426-470)||(20776462-20776506)
[»] chr3 (25 HSPs)
chr3 (415-466)||(46573392-46573443)
chr3 (388-469)||(33946485-33946566)
chr3 (414-468)||(40581012-40581066)
chr3 (414-452)||(52895357-52895395)
chr3 (388-469)||(40240512-40240593)
chr3 (421-469)||(4974414-4974462)
chr3 (421-469)||(38524191-38524239)
chr3 (389-469)||(43079869-43079949)
chr3 (390-469)||(37778205-37778284)
chr3 (422-468)||(3845958-3846004)
chr3 (388-453)||(48597817-48597883)
chr3 (416-457)||(22809140-22809181)
chr3 (421-469)||(3876198-3876246)
chr3 (421-469)||(20174875-20174923)
chr3 (414-469)||(53261702-53261758)
chr3 (414-469)||(37243562-37243617)
chr3 (415-469)||(34707648-34707702)
chr3 (418-464)||(35480341-35480387)
chr3 (415-453)||(36182601-36182639)
chr3 (416-469)||(17752066-17752119)
chr3 (416-469)||(19053386-19053439)
chr3 (422-463)||(45331236-45331277)
chr3 (389-469)||(10272191-10272270)
chr3 (421-453)||(27769752-27769784)
chr3 (421-453)||(30383868-30383900)
[»] scaffold0015 (1 HSPs)
scaffold0015 (421-464)||(48568-48611)
[»] scaffold0157 (1 HSPs)
scaffold0157 (414-469)||(24843-24898)
[»] scaffold1367 (1 HSPs)
scaffold1367 (428-469)||(1168-1209)
[»] scaffold0512 (1 HSPs)
scaffold0512 (421-469)||(4167-4215)
[»] scaffold0100 (1 HSPs)
scaffold0100 (421-469)||(38388-38436)
[»] scaffold0004 (1 HSPs)
scaffold0004 (421-457)||(227810-227846)


Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-110; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 388 - 630
Target Start/End: Complemental strand, 2019655 - 2019414
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcatatacatcaaaagcctgacc 487  Q
    ||||||||| ||| || ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2019655 acttatgaa-atataattttcgtcaatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcatatacatcaaaagcctgacc 2019557  T
Q  488 aaggaggcggctgttggcctgttgatcttatcctttccccatccatggaagtcctaatcataaaataaatcatttcactaaacaatttaattttgtcagt 587  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |    
T  2019556 aaggaggcggctgttggcctgttgatcttatcctttccctatccatggaagtcctaatcataatataaatcttttcactaaacaatttaattttgtcatt 2019457  T
Q  588 tagaataattgttctcaaacatgtataggtaggtgagttctgt 630  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2019456 tagaataattgttctcaaacatgtataggtaggtgagttctgt 2019414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 2020161 - 2019988
Alignment:
Q  1 accctaattccatgaaacattctgatccgatcgatcgcaatttttgaaatcttggatgagaagtactttgcaaaatgcacaattcaattagaagaaaatg 100  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2020161 acccaaattccatgaaacattctgatccgatcgatcgcaatgtttgaaatcttggatgagaagtactttgcaaaatgcacaattcaattagaagaaaatg 2020062  T
Q  101 aagaagatcgagtgttgttggagcggaaggggtaagttggtgactggttttcagagttcacacttaaagcaagc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2020061 aagaagatcgagtgttgttggagcggaaggggtaagttggtgactggttttcagagttcacacttaaagcaagc 2019988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 1947165 - 1947291
Alignment:
Q  43 tttgaaatcttggatgagaagtactttgcaaaatgcacaattcaattagaagaaaatgaagaagatcgagtgttgttggagcggaaggggtaagttggtg 142  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||| ||||||||||||||||||    
T  1947165 tttgaaatcttcgatgagaagtactttgcaaaatgcacaattcaatcagaagaa---gaagaagatcgagtgttgttggagtggaaggggtaagttggtg 1947261  T
Q  143 actggttttcagagttcacacttaaagcaa 172  Q
    ||||||||| ||| ||||||||||||||||    
T  1947262 actggttttaagaattcacacttaaagcaa 1947291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 232 - 351
Target Start/End: Complemental strand, 2019958 - 2019839
Alignment:
Q  232 attggttgctatttttatcaagtggttgaaaatttggcttaggctctgtttggataactgataaattaacttataacggataatcctatagaggatagct 331  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  |||||||||| ||    
T  2019958 attggttgctatttttatcaagtggttgcaaatttggcttaggctctgtttggataactaataaattaatttataacggataatcgcatagaggatacct 2019859  T
Q  332 gataagctaactgatagtgg 351  Q
    ||||||||||| ||||||||    
T  2019858 gataagctaaccgatagtgg 2019839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 388 - 469
Target Start/End: Original strand, 32975757 - 32975838
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||| || |||||| | |||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  32975757 acttatgaagatacaatttttgtttgtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcata 32975838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 584
Target Start/End: Original strand, 2049156 - 2049268
Alignment:
Q  480 gcctgaccaaggaggcggctgttggcctgttgatcttatcc-tttccccatccatggaag-------tcctaatcataaaataaatcatttcactaaaca 571  Q
    |||||||||||| ||| || ||||||||||||||||||||| |||||| |||||||||||       ||| |||||||||||||||| | | ||||||||    
T  2049156 gcctgaccaagggggcagcagttggcctgttgatcttatccttttccctatccatggaagtccaaaatccaaatcataaaataaatcttatgactaaaca 2049255  T
Q  572 atttaattttgtc 584  Q
    |||||||||||||    
T  2049256 atttaattttgtc 2049268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 25465863 - 25465782
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||| || ||||||   ||| || ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  25465863 acttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcata 25465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 450
Target Start/End: Original strand, 8752877 - 8752938
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttattt 450  Q
    |||| ||||||| ||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  8752877 cttaagaagatacaaattttgtttgtgagaacttatgaattaacataaaagcttatttattt 8752938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 28879153 - 28879206
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  28879153 agaacttatgaattaacataaaagcttatttatttgcataagctatttttcata 28879206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 10213766 - 10213846
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||| | || ||||||   |||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  10213766 cttatgaagaaacaatttttgttagtgagaacttatgaattaacatacaagcttatttatttgcataagctatttttcata 10213846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 25333717 - 25333636
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||| || ||| ||   ||| || |||||||||||||||||||||||||||||| || ||| |||||||||||    
T  25333717 acttatgaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttacataagctatttttcata 25333636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 9131111 - 9131063
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  9131111 ttatgaattaacataaaagtttatttatttgcataagctatttttcata 9131063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 10298941 - 10298862
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||  ||||||| |||||||||||||||||||| ||| |||||||| ||| |||| ||||||    
T  10298941 cttatgaagatacaatttttgttaatgagaacttatgaattaacataaaagc-tatctatttgcataagctattattcata 10298862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 32131536 - 32131591
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||||||||||||||||||| |||||||| ||  |||||||||||    
T  32131536 tgagaacttatgaattaacataaaagcttatctatttgcataaactatttttcata 32131591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 32213005 - 32212950
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||| || ||||||||||||||||||||||||| ||| |||||||||||    
T  32213005 tgagaacttataaaataacataaaagcttatttatttgcataagctatttttcata 32212950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 469
Target Start/End: Complemental strand, 34286553 - 34286499
Alignment:
Q  415 gagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||  |||||||||||    
T  34286553 gagaacttatgaattaatataaaagcttatttatttgcataacctatttttcata 34286499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 24350507 - 24350454
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||||||||| |||||||||||||| ||| || ||||||||    
T  24350507 agaacttatgaattaacataaaatcttatttatttgcataagctagttttcata 24350454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 2669751 - 2669799
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||||||||||||| || ||| | |||||||||    
T  2669751 ttatgaattaacataaaagcttatttattttcataagctctttttcata 2669799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 25671873 - 25671825
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||||||||||||||||| || ||| |||||||||||    
T  25671873 ttataaattaacataaaagcttatttatttacataagctatttttcata 25671825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 30974092 - 30974140
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||| |||||||||||||||||||||| ||| | |||||||||    
T  30974092 ttatgaattagcataaaagcttatttatttgcataagctctttttcata 30974140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 576
Target Start/End: Original strand, 2036411 - 2036481
Alignment:
Q  506 ctgttgatcttatcct-ttccccatccatggaagtcctaatcataaaataaatcatttcactaaacaattta 576  Q
    |||||||||||||| | ||||| ||| |||||||||  |||||||||||||||| ||| |||||||||||||    
T  2036411 ctgttgatcttatcttcttccctatc-atggaagtctcaatcataaaataaatcttttgactaaacaattta 2036481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 468
Target Start/End: Original strand, 24087274 - 24087321
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcat 468  Q
    |||| |||||| ||||||||||||||||||||| ||| ||||||||||    
T  24087274 ttataaattaaaataaaagcttatttatttgcataagctatttttcat 24087321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 28280805 - 28280860
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| |||||| |||||||||||||| ||| | |||||||||    
T  28280805 tgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcata 28280860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 453
Target Start/End: Complemental strand, 16706089 - 16706051
Alignment:
Q  415 gagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  16706089 gagaatttataaattaacataaaagcgtatttatttgca 16706051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Original strand, 13131553 - 13131594
Alignment:
Q  428 ttaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||||||||| | | |||||||||||    
T  13131553 ttaacataaaagcttatttatttgcatatgctatttttcata 13131594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 14942522 - 14942575
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||| ||||||||||||| |||||||||||||| ||| |||||| ||||    
T  14942522 agaacttataaattaacataaaaccttatttatttgcaaaagctattttccata 14942575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 469
Target Start/End: Original strand, 42102180 - 42102257
Alignment:
Q  392 atgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||| || ||| ||  ||||||  |||| |||||| |||||||||||||||||| || ||| |||||||||||    
T  42102180 atgaagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagctatttttcata 42102257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 9131000 - 9130968
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||||||||||| |||||||||||||    
T  9131000 ttatgaattaacataaaagtttatttatttgca 9130968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 12607182 - 12607230
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||| |||||||||||||||||| || ||| |||||||||||    
T  12607182 ttataaattaaaataaaagcttatttatttacataagctatttttcata 12607230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 35055525 - 35055572
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||| |||||||||||||||||| || ||| |||||||||||    
T  35055525 ttatgaattaa-ataaaagcttatttatttacataagctatttttcata 35055572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 36907627 - 36907595
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||| ||||||||||||||||||||||    
T  36907627 ttatgaattagcataaaagcttatttatttgca 36907595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 11912117 - 11912037
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||   |||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  11912117 cttatgaagatacaatttttgttagtgagaacttatgaattaacatgaaagcttatttatttgctcaagatatttttcata 11912037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 5559934 - 5559856
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttca 467  Q
    |||||||||||| || ||| ||   |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  5559934 cttatgaagatacaattttcgttagtgagaatttatgaatttacataaaagcttatttatttgcataagctatttttca 5559856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 28625551 - 28625631
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||| ||   ||||||  |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  28625551 cttatgaagatacaattttcgttagtgagaacctatgaattaacataaaagcttatttatttgcataagttatttttcata 28625631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 40697077 - 40697157
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||   ||| || ||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  40697077 cttatgaagatacaatttttgttcctgaaaacttatgaattaacataaaagcttatttatttgtataagctatttttcata 40697157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 6125382 - 6125437
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  6125382 tgagaaattatgaattaatataaaagcttatttatttgcataagctatttttcata 6125437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 465
Target Start/End: Original strand, 24030310 - 24030361
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  24030310 tgagaacttatgaattaacataaaagcttatttatttgcataagctattttt 24030361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 41125770 - 41125825
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  41125770 tgagaacttatgaattaacataaaagcttatatatttgcaaaagctatttttcata 41125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 13739331 - 13739380
Alignment:
Q  420 tttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  13739331 tttatgaattatcataaaagcttatttatttgcataagttatttttcata 13739380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 467
Target Start/End: Complemental strand, 39154751 - 39154698
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttca 467  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  39154751 tgagaacttatgaattaacacaaaagcttatttatttgcataagctatttttca 39154698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 15167705 - 15167649
Alignment:
Q  413 atgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||||||||||| |||||||| || ||  |||||||||||    
T  15167705 atgagaatttatgaattaacataaaagctaatttatttacataaactatttttcata 15167649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 29922172 - 29922124
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  29922172 ttatgaattaatataaaagcttatttatttgcataagctatttttcata 29922124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 589217 - 589300
Alignment:
Q  383 aaaatacttatgaagataaaaattttgtctatgagaatttatgaattaacat-aaaagcttatttatttgcacaaggtattttt 465  Q
    |||| ||||||||||||||||||||||    ||| || |||||||||||||| |||| |||||||||||||| ||| |||||||    
T  589217 aaaaaacttatgaagataaaaattttgatagtgaaaacttatgaattaacataaaaaacttatttatttgcataagctattttt 589300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 13060592 - 13060553
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  13060592 tgagaacttatgaattaacataaaagcttatttatttgca 13060553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 35083335 - 35083374
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  35083335 tgagaacttatgaattaacataaaagcttatttatttgca 35083374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 469
Target Start/End: Complemental strand, 40152890 - 40152811
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||| ||| ||   |||||| ||||||||||| ||||||| ||||||||||||| ||| | |||||||||    
T  40152890 ttatgaagataaaattttcgttcttgagaacttatgaattaatataaaagattatttatttgcataagatgtttttcata 40152811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 40452467 - 40452412
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||| ||||||| |||||||||||||||| ||| |||||||||||    
T  40452467 tgagaacttatgaataaacataatagcttatttatttgcataagctatttttcata 40452412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 41059779 - 41059740
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  41059779 tgagaacttatgaattaacataaaagcttatttatttgca 41059740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 33924763 - 33924717
Alignment:
Q  423 atgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  33924763 atgaattaacataaaaggttatttatttgcataagttatttttcata 33924717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 453
Target Start/End: Complemental strand, 7364325 - 7364260
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||||| ||  |||||   |||||| ||||||||||| |||||||||||||||||||||    
T  7364325 acttatgaagatacaatatttgttagtgagaacttatgaattaatataaaagcttatttatttgca 7364260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 12467336 - 12467419
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaatta---acataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||| | || ||||||   |||||| ||||||||||   ||||||||||||||||||||||| ||| |||||||||||    
T  12467336 cttatgaagagacaatttttgttagtgagaacttatgaattactaacataaaagcttatttatttgcataagttatttttcata 12467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 466
Target Start/End: Original strand, 1943091 - 1943143
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttc 466  Q
    |||||| |||||||||| |||||||||||||||||||||| |||  |||||||    
T  1943091 tgagaacttatgaattagcataaaagcttatttatttgcataagccatttttc 1943143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 10537217 - 10537161
Alignment:
Q  414 tgagaatttatgaattaacataaaa-gcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||||||||||||| |||||| |||||||| ||| |||||||||||    
T  10537217 tgagaacttatgaattaacataaaaagcttatatatttgcataagctatttttcata 10537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 453
Target Start/End: Original strand, 15364104 - 15364136
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||||||||||||||||||    
T  15364104 ttatgaattaacataaaagcttatttatttgca 15364136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 29136809 - 29136777
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||||||||||||||||||    
T  29136809 ttatgaattaacataaaagcttatttatttgca 29136777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 35536916 - 35536995
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||| ||   |||||| |||||||| || ||||||||||||||||||||| ||| |||||||||||    
T  35536916 cttatgaagatacaattttcgttactgagaacttatgaat-aatataaaagcttatttatttgcataagctatttttcata 35536995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 450
Target Start/End: Complemental strand, 43268650 - 43268590
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttattt 450  Q
    ||||||||||| || ||||||   |||||| |||| |||||||||||||||||||||||||    
T  43268650 ttatgaagatacaatttttgttagtgagaacttataaattaacataaaagcttatttattt 43268590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 2577418 - 2577363
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||||    
T  2577418 tgagaacttatgaattaacataacaatttatttatttgcataagctatttttcata 2577363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 453
Target Start/End: Original strand, 3977577 - 3977608
Alignment:
Q  422 tatgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||||||||||||||||||||||||    
T  3977577 tatgaattaacataaaagcttatttatttgca 3977608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 14243921 - 14243976
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||||  |||| |||||||||||||| ||| |||||||||||    
T  14243921 tgagaacttatgaattaactgaaaaacttatttatttgcaaaagctatttttcata 14243976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 17657338 - 17657377
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  17657338 tgagaacttatgaattaacataaaaggttatttatttgca 17657377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 29659156 - 29659211
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| |||||| |||||||||||||| ||| | |||||||||    
T  29659156 tgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcata 29659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 42852117 - 42852156
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  42852117 tgagaacttatgaattaacataaaagcttatttagttgca 42852156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 469
Target Start/End: Original strand, 6144835 - 6144889
Alignment:
Q  415 gagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||| ||||||||||| |||||||||| |||||||||| ||  |||||||||||    
T  6144835 gagaacttatgaattaatataaaagcttgtttatttgcataaactatttttcata 6144889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 451
Target Start/End: Complemental strand, 11163265 - 11163235
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttg 451  Q
    |||||||||||||||||||||||||||||||    
T  11163265 ttatgaattaacataaaagcttatttatttg 11163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 3520495 - 3520442
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||| ||||| ||||||||||||||||||||||  ||| |||||||||||    
T  3520495 agaacttaagaatttacataaaagcttatttatttgcgtaagctatttttcata 3520442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 450
Target Start/End: Complemental strand, 9251741 - 9251712
Alignment:
Q  421 ttatgaattaacataaaagcttatttattt 450  Q
    ||||||||||||||||||||||||||||||    
T  9251741 ttatgaattaacataaaagcttatttattt 9251712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 451
Target Start/End: Original strand, 11991400 - 11991437
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttg 451  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  11991400 tgagagtttataaattaacataaaagcttatttatttg 11991437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Complemental strand, 42558693 - 42558652
Alignment:
Q  428 ttaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||||||||||||| ||| |||||||||||    
T  42558693 ttaaaataaaagcttatttatttgcataagctatttttcata 42558652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 450
Target Start/End: Complemental strand, 7364157 - 7364121
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttattt 450  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  7364157 tgagaagttatgaattaacataaaagcttaattattt 7364121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 17868187 - 17868139
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||||| ||||||||||||| ||| |||||| ||||    
T  17868187 ttatcaattaacataaaaggttatttatttgcataagctattttccata 17868139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 27806018 - 27806062
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||| |||||||||||||| ||||||||||||| ||| |||||||    
T  27806018 ttataaattaacataaaagtttatttatttgcataagctattttt 27806062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Original strand, 28357244 - 28357276
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||| ||||||||||||||||||||||||||||    
T  28357244 ttataaattaacataaaagcttatttatttgca 28357276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 3e-16; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 29877710 - 29877790
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||   |||||| |||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  29877710 cttatgaagatacaatttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagctatttttcata 29877790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 48591439 - 48591359
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||| ||  ||||||| |||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  48591439 cttatgaagatacaattttcgttaatgagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttcata 48591359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 8130582 - 8130630
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  8130582 ttatgaattaacataaaaacttatttatttgcacaagctatttttcata 8130630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 18630910 - 18630830
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||  ||| ||   |||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  18630910 cttatgaagataaagttttcgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcata 18630830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 23297506 - 23297586
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||    ||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  23297506 cttatgaagatacaatttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagctatttttcata 23297586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 468
Target Start/End: Original strand, 48667768 - 48667820
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcat 468  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  48667768 agaacttatgaattaacataaaagcttatttatttgcataagctatttttcat 48667820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 34526327 - 34526272
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  34526327 tgagaacttatgaattaacataaaagcttatttatttgcataaactatttttcata 34526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 36255026 - 36254971
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||||||||||||||||||||||| |||| ||| |||||||||||    
T  36255026 tgagaacttatgaattaacataaaagcttatttatctgcataagctatttttcata 36254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 419 - 469
Target Start/End: Complemental strand, 38876107 - 38876057
Alignment:
Q  419 atttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  38876107 atttatgaattaacataaaagtttatttatttgcataagctatttttcata 38876057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 22273851 - 22273928
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttc 466  Q
    |||||||||||| || ||||||   |||||| ||||||||||||||||||| ||||||||||||| ||  ||||||||    
T  22273851 cttatgaagatacaatttttgttagtgagaagttatgaattaacataaaagtttatttatttgcataatctatttttc 22273928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 467
Target Start/End: Complemental strand, 11256650 - 11256598
Alignment:
Q  415 gagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttca 467  Q
    ||||| ||||||||||||||||||||||||||||||||| ||  |||||||||    
T  11256650 gagaacttatgaattaacataaaagcttatttatttgcataaactatttttca 11256598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 465
Target Start/End: Complemental strand, 488374 - 488323
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||| |||||||||||||||||||||||||||||| || ||| |||||||    
T  488374 tgagaacttatgaattaacataaaagcttatttatttccataagctattttt 488323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 469
Target Start/End: Original strand, 4331430 - 4331481
Alignment:
Q  418 aatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||| ||||||||||| || ||| |||||||||||    
T  4331430 aatttatgaattaacataaaaacttatttatttacataagttatttttcata 4331481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 465
Target Start/End: Complemental strand, 9153572 - 9153521
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||| |||||||    
T  9153572 tgagaatttataaattaacataaaagtttatttatttgcataagctattttt 9153521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 469
Target Start/End: Complemental strand, 18424292 - 18424213
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||| || ||||||   ||| || |||||||||||||||||||||||||||||| ||  || |||||||||||    
T  18424292 ttatgaagatacaatttttgttattgaaaacttatgaattaacataaaagcttatttattttcatgagctatttttcata 18424213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 426 - 469
Target Start/End: Original strand, 35405791 - 35405834
Alignment:
Q  426 aattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  35405791 aattaacataaaagcttatttatttgcataagctatttttcata 35405834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 36741000 - 36741055
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||| |||| ||||||||||||||||||| ||| |||||||||||    
T  36741000 tgagaacttatgaatcaacacaaaagcttatttatttgcataagctatttttcata 36741055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 451
Target Start/End: Original strand, 48721890 - 48721953
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttg 451  Q
    ||||||||||||| || ||||||   |||||| ||||||||||| |||||||||||||||||||    
T  48721890 acttatgaagatataatttttgttagtgagaacttatgaattaatataaaagcttatttatttg 48721953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 452
Target Start/End: Original strand, 34633486 - 34633524
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgc 452  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34633486 tgagaacttatgaattaacataaaagcttatttatttgc 34633524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 17222927 - 17222980
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||||||||| |||||||||||| | ||| |||||||||||    
T  17222927 agaacttatgaattaacataaaaacttatttatttgaataagctatttttcata 17222980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 38345810 - 38345761
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||| |||||||||||||||||||||||||||||| || ||| |||||||    
T  38345810 agaacttatgaattaacataaaagcttatttatttacataagctattttt 38345761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 41229001 - 41229054
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||| ||||||||| ||||||||||| ||| |||||||||||    
T  41229001 agaacttatgaattaatataaaagctaatttatttgcataagctatttttcata 41229054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 42153143 - 42153102
Alignment:
Q  423 atgaattaacataaaagcttatttatttgcacaaggtatttt 464  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  42153143 atgaattaacataaaagcttatttatttgcataagctatttt 42153102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 3564309 - 3564357
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||||| ||||||||||||| ||| |||||||||||    
T  3564309 ttataaattaacataaaagattatttatttgcataagctatttttcata 3564357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 464
Target Start/End: Original strand, 7148870 - 7148918
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttt 464  Q
    |||| |||||||||| |||||||||||||||||||||| ||| ||||||    
T  7148870 agaacttatgaattagcataaaagcttatttatttgcataagctatttt 7148918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 42611852 - 42611820
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||||||||||||||||||    
T  42611852 ttatgaattaacataaaagcttatttatttgca 42611820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 43699432 - 43699388
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||    
T  43699432 ttatgaattaacataaaaacttatttatttgcataagctattttt 43699388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 12495634 - 12495579
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||| ||||||||||||| |||||||||||||| ||| || ||||||||    
T  12495634 tgagaacttataaattaacataaaaacttatttatttgcataagctacttttcata 12495579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 467
Target Start/End: Complemental strand, 43213530 - 43213452
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttca 467  Q
    ||||||||||||| || ||||||  |||| || | ||||||||||||||||  ||||||||||||| ||| |||||||||    
T  43213530 acttatgaagatacaatttttgttaatgataact-atgaattaacataaaaatttatttatttgcataagttatttttca 43213452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 452
Target Start/End: Original strand, 36298404 - 36298466
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgc 452  Q
    |||||||||||||  ||||||  |||| || ||||||||||| ||||||| ||||||||||||    
T  36298404 ttatgaagataaattttttgttaatgaaaacttatgaattaatataaaagtttatttatttgc 36298466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 48687030 - 48687080
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttt 464  Q
    |||||| ||||||||||||||| ||| ||||||||||||| ||| ||||||    
T  48687030 tgagaacttatgaattaacatataagtttatttatttgcataagctatttt 48687080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Original strand, 28074470 - 28074515
Alignment:
Q  424 tgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||| |||||||||||||| ||| |||||||||||    
T  28074470 tgaaataacataaaatcttatttatttgcataagctatttttcata 28074515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 28663666 - 28663723
Alignment:
Q  412 tatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||| ||||||| ||||||||||||||| ||| ||||| ||  |||||||||||    
T  28663666 tatgagaacttatgaactaacataaaagcttaattagttgcataaactatttttcata 28663723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Original strand, 825785 - 825817
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||| ||||||||||||||    
T  825785 ttatgaattaacataaaatcttatttatttgca 825817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 897073 - 897121
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||| ||||||||||||||||||||| ||  |||||||||||    
T  897073 ttataaattaatataaaagcttatttatttgcataaactatttttcata 897121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 2702698 - 2702666
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||||||||||||||| |||||||||    
T  2702698 ttatgaattaacataaaagcttaattatttgca 2702666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 24101939 - 24101891
Alignment:
Q  405 ttttgtctatgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||  |||||| |||| ||||||||||||| ||||||||||||||    
T  24101939 ttttgtccgtgagaacttataaattaacataaaaacttatttatttgca 24101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 30956787 - 30956835
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||  ||||| |||||||||||||| ||| |||||||||||    
T  30956787 ttatgaattaatgtaaaaacttatttatttgcataagctatttttcata 30956835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 46704285 - 46704205
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||| |||  |   |||||| ||||||||||| ||||||  ||| ||||||||| ||| |||||||||||    
T  46704285 cttatgaagataaaattttcattagtgagaacttatgaattaatataaaaagttacttatttgcataagttatttttcata 46704205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 4026996 - 4027076
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||   |||||| |||||||||||||||| |||||||||||||||| ||| |||||||||||    
T  4026996 cttatgaagatacaatttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatttttcata 4027076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Original strand, 21788527 - 21788608
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||| ||| ||   |||||  ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  21788527 acttatgaagataaaattttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataagttatttttcata 21788608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 8832560 - 8832608
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  8832560 ttatgaattaacataaaagcttatttatttgcataagctatttttcata 8832608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 36501530 - 36501452
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttca 467  Q
    ||||||||||||||| ||  ||   |||||| | ||||||||||||||||||||||||||||||| ||| |||||||||    
T  36501530 cttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagcttatttatttgcataagctatttttca 36501452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 37420009 - 37420057
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  37420009 ttatgaattaacataaaagcttatttatttgcataaattatttttcata 37420057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 466
Target Start/End: Original strand, 38216115 - 38216167
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttc 466  Q
    |||||| |||||| |||||||||||||||||||||||||| ||| ||||||||    
T  38216115 tgagaacttatgagttaacataaaagcttatttatttgcataagctatttttc 38216167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 468
Target Start/End: Original strand, 5903633 - 5903688
Alignment:
Q  413 atgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcat 468  Q
    ||||||| ||| |||| |||||||||||||||||||||||| ||| ||||||||||    
T  5903633 atgagaacttaagaataaacataaaagcttatttatttgcataagctatttttcat 5903688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 25836702 - 25836648
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  25836702 tgagaacttatgaat-aacataaaagcttatttatttgcataaggtattcttcata 25836648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 755692 - 755646
Alignment:
Q  423 atgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||    
T  755692 atgaattaacataaaagcttctttatttgcataagctatttttcata 755646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 4533425 - 4533473
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||| |||| ||||||||||||||||| ||| |||||||||||    
T  4533425 ttatgaattagcatagaagcttatttatttgcataagctatttttcata 4533473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 467
Target Start/End: Original strand, 887510 - 887561
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttca 467  Q
    |||| |||||||||||||||||||||||| |||||||| ||| | |||||||    
T  887510 agaacttatgaattaacataaaagcttatctatttgcataagctgtttttca 887561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 465
Target Start/End: Original strand, 1120381 - 1120432
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||| | ||||||||||||||||| ||||||||||||| ||| |||||||    
T  1120381 tgagaactcatgaattaacataaaagattatttatttgcataagctattttt 1120432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 457
Target Start/End: Complemental strand, 10574175 - 10574108
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaag 457  Q
    ||||||||||| |||||| |||   ||||  |||| |||||| |||||||||||||||||||||||||    
T  10574175 ttatgaagatacaaatttcgtcagcgagagcttataaattaaaataaaagcttatttatttgcacaag 10574108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 452
Target Start/End: Original strand, 29774841 - 29774879
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgc 452  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  29774841 tgagaacttatgaattaacgtaaaagcttatttatttgc 29774879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 467
Target Start/End: Original strand, 736036 - 736113
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttca 467  Q
    ||||||||||| || ||||||   |||||| |||| ||||||||||||| ||||||||| | || ||| |||||||||    
T  736036 ttatgaagatataatttttgttattgagaacttataaattaacataaaaacttatttatatacataagctatttttca 736113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 7480887 - 7480850
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  7480887 agaacttatgaattaacataaaaacttatttatttgca 7480850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 27679443 - 27679386
Alignment:
Q  283 ggataactgataaattaacttataacggataatcctatagaggatagctgataagcta 340  Q
    |||||| |||||| |||||||||| ||||| | | ||||| |||||||||||||||||    
T  27679443 ggataattgataagttaacttatatcggatgaacttatagtggatagctgataagcta 27679386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 42064949 - 42064986
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  42064949 agaacttatgaattaatataaaagcttatttatttgca 42064986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 466
Target Start/End: Complemental strand, 42839304 - 42839259
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttc 466  Q
    |||| |||||||||||||||||||||| ||||| ||| ||||||||    
T  42839304 ttatcaattaacataaaagcttatttaattgcataagctatttttc 42839259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 45163868 - 45163819
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcatat 470  Q
    ||||||||| |||| ||||||||||||| |||| ||| ||||||||||||    
T  45163868 ttatgaattgacatgaaagcttatttatctgcataagctatttttcatat 45163819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 432 - 468
Target Start/End: Original strand, 5903729 - 5903765
Alignment:
Q  432 cataaaagcttatttatttgcacaaggtatttttcat 468  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  5903729 cataaaagcttatttatttgcataagctatttttcat 5903765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 465
Target Start/End: Original strand, 11777055 - 11777131
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||||||||| |  ||||||   |||||| |||| || |||||||||| |||||||||||||| ||| |||||||    
T  11777055 cttatgaagatacactttttgttagtgagaacttataaactaacataaaaccttatttatttgcagaagctattttt 11777131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 12442905 - 12442953
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| ||||||||||||||| |||| ||| | |||||||||    
T  12442905 ttatgaattaacttaaaagcttatttatctgcataagctgtttttcata 12442953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 12950098 - 12950066
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||||||||||||||| |||||||||    
T  12950098 ttatgaattaacataaaagcttaattatttgca 12950066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 15155908 - 15155964
Alignment:
Q  413 atgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||| ||||||||||| |||||| ||||||||||| || ||| | |||||||||    
T  15155908 atgagaacttatgaattaagataaaaacttatttattttcataagctctttttcata 15155964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 23956255 - 23956215
Alignment:
Q  413 atgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    ||||||| |||| ||||||||||||| ||||||||||||||    
T  23956255 atgagaacttataaattaacataaaaacttatttatttgca 23956215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 33321327 - 33321247
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||   |||||  || |||||||||||||| | ||||||||||||| ||| |||||| ||||    
T  33321327 cttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagctattttacata 33321247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 450
Target Start/End: Original strand, 35235201 - 35235237
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttattt 450  Q
    |||||| |||||||||||||||||| |||||||||||    
T  35235201 tgagaacttatgaattaacataaaatcttatttattt 35235237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 39592345 - 39592398
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||| ||||  ||||||||||| |||||| ||| |||||||||||    
T  39592345 tgagaatttatgaataaaca--aaagcttatttctttgcataagctatttttcata 39592398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 48819370 - 48819450
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| |  ||||||   |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  48819370 cttatgaagatacattttttgttagtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttcata 48819450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 469
Target Start/End: Complemental strand, 9572798 - 9572719
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||  ||||||   |||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  9572798 ttatgaagataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcata 9572719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 28690075 - 28690155
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || |||| |   |||||| || |||||||||||||||||||||||||||||| ||| |||||||||||    
T  28690075 cttatgaagatacaatttttattagtgagaaattctgaattaacataaaagcttatttatttgcataagctatttttcata 28690155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 37329427 - 37329347
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||| ||   |||||| |||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  37329427 cttatgaagatacaattttcgttggtgagaacttataaattaacataaaagcttatttatttgcataagttatttttcata 37329347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 28870299 - 28870354
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  28870299 tgagaacttatgaatgaacataaaagcttatttatttgcaaaagttatttttcata 28870354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 469
Target Start/End: Original strand, 13039017 - 13039098
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||  ||| ||   |||||| ||||||||||| ||||||| ||||||||||||| ||| |||||||||||    
T  13039017 acttatgaagataaagttttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagctatttttcata 13039098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 47413475 - 47413523
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  47413475 ttataaattaacataaaagcttatttatttgcataagctatttttcata 47413523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 16888956 - 16888917
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  16888956 tgagaatttatgacttaacataaaagcttatttatttgca 16888917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 31249778 - 31249833
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||| |||||||||| ||||||| ||||||||||||| ||| |||||||||||    
T  31249778 tgagaatctatgaattaatataaaagtttatttatttgcaaaagttatttttcata 31249833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 469
Target Start/End: Complemental strand, 1565359 - 1565310
Alignment:
Q  419 atttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  1565359 atttatgaaataacataaaagcttatttatttgca-aagctatttttcata 1565310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 463
Target Start/End: Complemental strand, 6337771 - 6337697
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtattt 463  Q
    |||||||||||| || ||||||    ||||| |||||||||||||||||||||||||| |||||| ||| |||||    
T  6337771 cttatgaagatacaatttttgttagcgagaacttatgaattaacataaaagcttatttgtttgcataagctattt 6337697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 37712165 - 37712215
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttc 466  Q
    |||| ||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  37712165 agaacttatgaattaacataaaagtttatttatttgcataagctatttttc 37712215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 469
Target Start/End: Complemental strand, 6900598 - 6900549
Alignment:
Q  420 tttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||| |||||| |||||||||||||||  ||||||||||    
T  6900598 tttatgaattaacatgaaagctcatttatttgcacaagcaatttttcata 6900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 36422997 - 36422916
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||| ||   |||||| |||| || ||| ||||||| ||||||||||||| ||| |||| ||||||    
T  36422997 acttatgaagataaaaatttcgttagtgagaagttataaaataatataaaagtttatttatttgcataagttattcttcata 36422916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 46689566 - 46689485
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||| |||||| ||| ||   |||||| ||||||||||| |||| || ||||||||||||| ||| |||||||||||    
T  46689566 acttatgaaaataaaattttcgttagtgagaacttatgaattaatataatagtttatttatttgcataagttatttttcata 46689485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 15515362 - 15515282
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||| ||   |||||| |||||||||||||| ||||||||||||||| |  ||| |||||||||||    
T  15515362 cttatgaagatacaattttcgttagtgagaacttatgaattaacatgaaagcttatttatttacttaagctatttttcata 15515282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 26988251 - 26988299
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||| ||||||||||| ||  |||||||||||    
T  26988251 ttatgaattaacataaaagctaatttatttgcataaactatttttcata 26988299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 41196725 - 41196645
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||   |||||  || |||||||||||||| ||||||||||||||| ||| |||||| ||||    
T  41196725 cttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggcttatttatttgcataagctattttacata 41196645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 42367053 - 42367101
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||| | |||||||||||||| ||| |||||||||||    
T  42367053 ttatgaattaacataagaacttatttatttgcataagctatttttcata 42367101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 469
Target Start/End: Original strand, 391272 - 391327
Alignment:
Q  415 gagaatttatgaattaacataaaa-gcttatttatttgcacaaggtatttttcata 469  Q
    ||||| |||||||||||||||||| ||||||||||||| | ||| |||||||||||    
T  391272 gagaacttatgaattaacataaaaagcttatttatttggataagctatttttcata 391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 449
Target Start/End: Complemental strand, 3069844 - 3069809
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatt 449  Q
    |||||| |||||||||||||||||||||||||||||    
T  3069844 tgagaacttatgaattaacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 4068211 - 4068266
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| ||||||| ||||||||||||| ||| || ||||||||    
T  4068211 tgagaacttatgaattaatataaaagtttatttatttgcataagctacttttcata 4068266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 469
Target Start/End: Original strand, 10365278 - 10365321
Alignment:
Q  426 aattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||    
T  10365278 aattaacataaaagcttattcatttgcataagctatttttcata 10365321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 22593397 - 22593358
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  22593397 tgagaacttataaattaacataaaagcttatttatttgca 22593358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 35897605 - 35897554
Alignment:
Q  418 aatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||| |||||||||||||| |||||||||| || ||| |||||||||||    
T  35897605 aatttataaattaacataaaagtttatttatttacataagctatttttcata 35897554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 468
Target Start/End: Original strand, 37431237 - 37431284
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcat 468  Q
    ||||||||||||| ||||||||||||||| ||| ||| ||||||||||    
T  37431237 ttatgaattaacaaaaaagcttatttattcgcataagttatttttcat 37431284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 38781174 - 38781213
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  38781174 tgagaacttatgaattaacataaaagcatatttatttgca 38781213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 45334934 - 45334989
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||| ||||||||||||  ||||| ||  |||||||||||    
T  45334934 tgagaatttatgaattaacagaaaagcttattttattgcataacttatttttcata 45334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 469
Target Start/End: Original strand, 1005409 - 1005491
Alignment:
Q  387 tacttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||| || |||||    |||||| |||||||||||||| |||||| |||||||||   ||| |||||||||||    
T  1005409 tacttatgaagatacaatttttgatagtgagaacttatgaattaacatcaaagctcatttatttgagtaagctatttttcata 1005491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 464
Target Start/End: Complemental strand, 4068145 - 4068112
Alignment:
Q  431 acataaaagcttatttatttgcacaaggtatttt 464  Q
    ||||||||||||||||||||||||||| ||||||    
T  4068145 acataaaagcttatttatttgcacaagctatttt 4068112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 451
Target Start/End: Original strand, 10082347 - 10082384
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttg 451  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  10082347 tgagaacttatgaattaatataaaagcttatttatttg 10082384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 469
Target Start/End: Original strand, 15791457 - 15791534
Alignment:
Q  392 atgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||| || ||| ||  ||||||  |||| |||||| |||||||||||||||||| || ||| |||||||||||    
T  15791457 atgaagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagctatttttcata 15791534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 39658310 - 39658257
Alignment:
Q  417 gaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcatat 470  Q
    |||||||||||||||||||||||||  |||||||||| |||  |||||| ||||    
T  39658310 gaatttatgaattaacataaaagctactttatttgcataagtaatttttaatat 39658257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 46473164 - 46473229
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||  ||| ||  || |||| ||||||||||| |||||| ||||||||||||||    
T  46473164 acttatgaagataaagttttcgttaataagaacttatgaattaatataaaatcttatttatttgca 46473229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 10850049 - 10850001
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||| |||||||||||||||| | ||| |||||||||||    
T  10850049 ttataaattaacatgaaagcttatttatttgtataagttatttttcata 10850001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 19220276 - 19220324
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||| ||||||||||||||||||||| ||  |||||||||||    
T  19220276 ttataaattaaaataaaagcttatttatttgcataaactatttttcata 19220324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 453
Target Start/End: Original strand, 23544898 - 23544926
Alignment:
Q  425 gaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||||||||||||||    
T  23544898 gaattaacataaaagcttatttatttgca 23544926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 37156903 - 37156871
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||||||||||||||| |||||||||    
T  37156903 ttatgaattaacataaaagcttaattatttgca 37156871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 46500983 - 46500939
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||| ||| |||||||||||||||||||||||| ||| |||||||    
T  46500983 ttataaatcaacataaaagcttatttatttgcataagttattttt 46500939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 33204930 - 33204985
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  33204930 tgagaacttatgaattaacataaaagcttatttatttgcataagatatttttcata 33204985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 26331867 - 26331916
Alignment:
Q  420 tttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  26331867 tttatgaattaacataaaagcttatttatttgcataagctatttttcata 26331916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 29390539 - 29390486
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  29390539 agaatttatgaattaacataaaagcttatttatttgcataaactatttttcata 29390486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 29378743 - 29378796
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  29378743 agaacttatgaattaacgtaaaagcttatttatttgcataagctatttttcata 29378796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 44613461 - 44613408
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  44613461 agaacttatgaattaatataaaagcttatttatttgcataagctatttttcata 44613408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 465
Target Start/End: Original strand, 34923029 - 34923080
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  34923029 tgagaacttatgaactaacataaaagcttatttatttgcataagctattttt 34923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 38372654 - 38372709
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||||||||||||| |||||||||||  || |||||||||||    
T  38372654 tgagaacttatgaattaacataaaagctgatttatttgcattagctatttttcata 38372709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 422 - 469
Target Start/End: Original strand, 39279534 - 39279581
Alignment:
Q  422 tatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||    
T  39279534 tatgaattaacataaaagcttatttatttgtataagctatttttcata 39279581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 469
Target Start/End: Complemental strand, 37465875 - 37465821
Alignment:
Q  415 gagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||| || ||||||||    
T  37465875 gagaacttatgaattaatataaaagcttatttatttgcataagctaattttcata 37465821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 1401171 - 1401224
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||||||||||||||||||||||||  |  |||||||||||    
T  1401171 agaacttatgaattaacataaaagcttatttatttgcatgaactatttttcata 1401224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 9534073 - 9534033
Alignment:
Q  413 atgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  9534073 atgagaatttataaattaacataaaaacttatttatttgca 9534033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 453
Target Start/End: Original strand, 30181653 - 30181685
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||||||||||||||||||    
T  30181653 ttatgaattaacataaaagcttatttatttgca 30181685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 991595 - 991650
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||| ||||| |||||| |||||||||||||||||| || ||| |||||||||||    
T  991595 tgagagtttataaattaaaataaaagcttatttatttacataagctatttttcata 991650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 14691289 - 14691234
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||||||||||| |||||||||||||  |  |||||||||||    
T  14691289 tgagaacttatgaattaacataaaaggttatttatttgcatgaactatttttcata 14691234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 453
Target Start/End: Complemental strand, 14691313 - 14691250
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||| || ||| ||   |||||| ||||||||||||||||||| |||||||||||||    
T  14691313 ttatgaagatataattttcgttagtgagaacttatgaattaacataaaaggttatttatttgca 14691250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 469
Target Start/End: Original strand, 25908366 - 25908445
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||| || ||| || | ||| || |||| ||||||||||||| |||||||||||||| |||  ||||||||||    
T  25908366 ttatgaagatacaattttcgtttgtgaaaagttataaattaacataaaaacttatttatttgcataagccatttttcata 25908445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 468
Target Start/End: Complemental strand, 30094712 - 30094665
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcat 468  Q
    ||||||||||| ||||||||||||||||||||| ||| | ||||||||    
T  30094712 ttatgaattaagataaaagcttatttatttgcataagctctttttcat 30094665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 43818868 - 43818813
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| |||||| |||||||||||||| ||| | |||||||||    
T  43818868 tgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcata 43818813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 47654404 - 47654349
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| |||||| |||||||||||||| ||| | |||||||||    
T  47654404 tgagaacttatgaattaagataaaaacttatttatttgcataagatctttttcata 47654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 49104358 - 49104319
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  49104358 tgagaatttatgaattaacataaaaatttatttatttgca 49104319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 469
Target Start/End: Original strand, 25655666 - 25655716
Alignment:
Q  419 atttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||| |||||| |||||||||||||| ||| |||||||||||    
T  25655666 atttttgaattaaaataaaaacttatttatttgcaaaagttatttttcata 25655716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 35809192 - 35809241
Alignment:
Q  420 tttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||||||| |||||| || ||| | |||||||||    
T  35809192 tttatgaattaacataaaagcttaattatttacataagctctttttcata 35809241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 8180574 - 8180526
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||| ||||||| ||||||||||||| ||| || ||||||||    
T  8180574 ttatgaattaatataaaagtttatttatttgcataagttaattttcata 8180526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 20888677 - 20888725
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||||| |||| ||||||||| ||| |||||||||||    
T  20888677 ttataaattaacataaaaacttacttatttgcataagttatttttcata 20888725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 28004686 - 28004730
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||| |||||| ||||||||||||||||||||| ||| |||||||    
T  28004686 ttataaattaaaataaaagcttatttatttgcataagctattttt 28004730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 469
Target Start/End: Original strand, 32848630 - 32848682
Alignment:
Q  418 aatttatgaattaacataaaagcttattta-tttgcacaaggtatttttcata 469  Q
    ||||||| ||||||||||||| |||||||| |||||| ||| |||||||||||    
T  32848630 aatttataaattaacataaaaccttatttattttgcataagttatttttcata 32848682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 33288058 - 33288010
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||| |||||||||||| | ||| || ||||||||    
T  33288058 ttatgaattaacataaaaacttatttatttggataagctagttttcata 33288010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 44834966 - 44834918
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  44834966 ttataaattaacattaaagtttatttatttgcataagttatttttcata 44834918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 450
Target Start/End: Original strand, 46744049 - 46744085
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttattt 450  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  46744049 tgagaacttacgaattaacataaaagcttatttattt 46744085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 35071418 - 35071363
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  35071418 tgagaacttatgaattaacataaaagcttatttatttgcataagctatttttcata 35071363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 6752908 - 6752963
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  6752908 tgaggatttatgaattaatataaaagcttatttatttgcataagctatttttcata 6752963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 23239343 - 23239398
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  23239343 tgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcata 23239398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 464
Target Start/End: Complemental strand, 3210979 - 3210929
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttt 464  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  3210979 tgagaacttatgaattaacataaaagcttatttatttgcataagctatttt 3210929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 2027191 - 2027111
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||||||   | |||| ||||||||||||||||||| |||| |||||||| ||| |||||||||||    
T  2027191 cttatgaagatacaacttttgttagtaagaacttatgaattaacataaaagtttatctatttgcataagctatttttcata 2027111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 3829935 - 3829848
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacata-----aaagcttatttatttgcacaaggtatttttcatat 470  Q
    |||||||||||||||| ||||||  || |||| |||||||||||||||     ||||||||||||||| || ||| ||||||||||||    
T  3829935 acttatgaagataaaatttttgttaataagaacttatgaattaacataaaattaaagcttatttatttacataagctatttttcatat 3829848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 9201711 - 9201672
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  9201711 tgagaacttatgaattaacataaaagcttatttatttgca 9201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 416 - 467
Target Start/End: Complemental strand, 10755271 - 10755220
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttca 467  Q
    |||| ||||||||||||||||||||||||||||||||| ||  |||||||||    
T  10755271 agaacttatgaattaacataaaagcttatttatttgcataaactatttttca 10755220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 32675879 - 32675824
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| |||||| |||||||||||||| ||| |||||||||||    
T  32675879 tgagaacttatgaattaatataaaaacttatttatttgcataagttatttttcata 32675824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 12816882 - 12816836
Alignment:
Q  423 atgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||    
T  12816882 atgaattaacataaaagcttatttatttgcataaactatttttcata 12816836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 21891326 - 21891273
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||||||||||||||||| ||| ||| ||| |||||||||||    
T  21891326 agaacttatgaattaacataaaagcttattcattcgcataagctatttttcata 21891273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 465
Target Start/End: Original strand, 2255805 - 2255881
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||||||||| || |||||    ||||||  ||||||||||||||||||||||||||||| || ||| |||||||    
T  2255805 cttatgaagatacaatttttggtagtgagaacatatgaattaacataaaagcttatttatttacataagttattttt 2255881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 467
Target Start/End: Original strand, 6758697 - 6758777
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaa-gcttatttatttgcacaaggtatttttca 467  Q
    |||||| |||||| |||||| ||   |||||| ||||||||||| |||||| ||||||||||||||| ||| |||||||||    
T  6758697 acttatcaagatacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgcataagctatttttca 6758777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 9202382 - 9202334
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||||||||||||||||||||  || ||| |||||||||||    
T  9202382 ttatgaattaacataaaagcttatttattaacataagctatttttcata 9202334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 9764374 - 9764326
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||||||||||||||||||| ||  |||||||||||    
T  9764374 ttataaattaacataaaagcttatttatttgcataaattatttttcata 9764326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 453
Target Start/End: Original strand, 10874087 - 10874119
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||||||||||||||||||    
T  10874087 ttatgaattaacataaaagcttatttatttgca 10874119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 7267878 - 7267917
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  7267878 tgagaacttacgaattaacataaaagcttatttatttgca 7267917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 465
Target Start/End: Complemental strand, 12817086 - 12817047
Alignment:
Q  426 aattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  12817086 aattaacataaaagcttatttatttgcataagctattttt 12817047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 465
Target Start/End: Complemental strand, 21025197 - 21025158
Alignment:
Q  426 aattaacataaaagcttatttatttgcacaaggtattttt 465  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  21025197 aattaacataaaagcttatttatttgcataagctattttt 21025158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 29623467 - 29623413
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||||||||||||||||  |||||||||||||| ||| |||||||||||    
T  29623467 tgagaacttatgaattaacataaat-cttatttatttgcataagctatttttcata 29623413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 2034212 - 2034164
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| | |||||||||||||||||||||||| ||| ||||| |||||    
T  2034212 ttatgattcaacataaaagcttatttatttgcataagctatttatcata 2034164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 2040169 - 2040117
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcat 468  Q
    |||| |||| |||||| |||||| |||||||||||||| ||| ||||||||||    
T  2040169 agaacttataaattaatataaaaacttatttatttgcataagttatttttcat 2040117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 20776462 - 20776506
Alignment:
Q  426 aattaacataaaagcttatttatttgcacaaggtatttttcatat 470  Q
    ||||| |||||||| ||||||||||||| ||| ||||||||||||    
T  20776462 aattatcataaaagtttatttatttgcataagttatttttcatat 20776506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 415 - 466
Target Start/End: Complemental strand, 46573443 - 46573392
Alignment:
Q  415 gagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttc 466  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  46573443 gagaatttatgaattaacataaaagcttatttatttgcataagctatttttc 46573392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 33946566 - 33946485
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||| |||||||| ||| ||  ||||||| ||||||||||| ||||||||| ||||||||||| ||| |||||||||||    
T  33946566 acttatgtagataaaattttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatttttcata 33946485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 468
Target Start/End: Complemental strand, 40581066 - 40581012
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcat 468  Q
    |||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  40581066 tgagaacttatgaattaacataaaatcttatttatttgcataagatatttttcat 40581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 452
Target Start/End: Complemental strand, 52895395 - 52895357
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgc 452  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52895395 tgagaatttatgaattaacataaaagcttatttatttgc 52895357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 40240593 - 40240512
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||| || ||| ||   |||||  ||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  40240593 acttatgaagatacaattttcgttagtgagagcttatgaattaagataaaagcttatttatttgcataagctatttttcata 40240512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 4974414 - 4974462
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  4974414 ttatgaattaacataaaagcttatttatttgcataagctctttttcata 4974462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 38524191 - 38524239
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  38524191 ttatgaattaacataaaagcttatttatttgcataagctctttttcata 38524239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 43079949 - 43079869
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||||| || ||| ||   |||||| |||||||||||| |||||||||||||||||| | ||| |||||||||||    
T  43079949 cttatgaagatacaattttcgtgattgagaacttatgaattaacttaaaagcttatttatttgaataagctatttttcata 43079869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 469
Target Start/End: Original strand, 37778205 - 37778284
Alignment:
Q  390 ttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||| || ||||||   |||||| |||| |||||| |||||||||||||||||| |||||  |||||||||||    
T  37778205 ttatgaagatacaatttttgttagtgagaacttataaattaaaataaaagcttatttatttacacaaattatttttcata 37778284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 468
Target Start/End: Original strand, 3845958 - 3846004
Alignment:
Q  422 tatgaattaacataaaagcttatttatttgcacaaggtatttttcat 468  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  3845958 tatgaattaacataaaagcttatttatttgcataagctatttctcat 3846004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 453
Target Start/End: Complemental strand, 48597883 - 48597817
Alignment:
Q  388 acttatgaagataaaaattttgtctatgagaattta-tgaattaacataaaagcttatttatttgca 453  Q
    ||||||||||||| || ||| |||  |||||| ||| ||||||||||||||||||||||||||||||    
T  48597883 acttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgca 48597817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 457
Target Start/End: Complemental strand, 22809181 - 22809140
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaag 457  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  22809181 agaacttatgaattaacataaaaacttatttatttgcacaag 22809140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 3876246 - 3876198
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||||||| |||||| |||||||||||||| ||| |||||||||||    
T  3876246 ttatgaattaatataaaaacttatttatttgcataagctatttttcata 3876198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 20174923 - 20174875
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||||||| |||||||||||||||||||||| ||| | |||||||||    
T  20174923 ttatgaattagcataaaagcttatttatttgcataagctctttttcata 20174875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 53261758 - 53261702
Alignment:
Q  414 tgagaatttatgaattaaca-taaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||||| |||||||||||||| ||||| ||| |||||||||||    
T  53261758 tgagaacttatgaattaacaataaaagcttatttaattgcataagctatttttcata 53261702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 37243562 - 37243617
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| ||||||||||| ||||||||||| ||||||||| ||| | |||||||||    
T  37243562 tgagaacttatgaattaagataaaagcttacttatttgcataagctctttttcata 37243617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 469
Target Start/End: Complemental strand, 34707702 - 34707648
Alignment:
Q  415 gagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||| ||| |||||||||||||| |||||||||||||  ||| |||||||||||    
T  34707702 gagaacttacgaattaacataaaaacttatttatttgcttaagttatttttcata 34707648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 464
Target Start/End: Complemental strand, 35480387 - 35480341
Alignment:
Q  418 aatttatgaattaacataaaagcttatttatttgcacaaggtatttt 464  Q
    |||||||||||||||||| ||||| ||||||||||| ||| ||||||    
T  35480387 aatttatgaattaacatacaagctcatttatttgcataagttatttt 35480341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 453
Target Start/End: Original strand, 36182601 - 36182639
Alignment:
Q  415 gagaatttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  36182601 gagaatttaaaaattaacataaaagcttatttatttgca 36182639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 17752119 - 17752066
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||| |||||||||||||| |||||||||| || ||| |||||||||||    
T  17752119 agaacttataaattaacataaaagtttatttatttacataagctatttttcata 17752066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 19053439 - 19053386
Alignment:
Q  416 agaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||| |||||||||||||| |||||||||| || ||| |||||||||||    
T  19053439 agaacttataaattaacataaaagtttatttatttacataagctatttttcata 19053386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 463
Target Start/End: Complemental strand, 45331277 - 45331236
Alignment:
Q  422 tatgaattaacataaaagcttatttatttgcacaaggtattt 463  Q
    |||||||||||||||||| ||||||||||||| ||| |||||    
T  45331277 tatgaattaacataaaagtttatttatttgcataagctattt 45331236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 10272191 - 10272270
Alignment:
Q  389 cttatgaagataaaaattttgtctatgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    ||||||| |||| |||||| ||  || |||| ||||||||||||||| ||| |||||| |||||| || ||||||||||||    
T  10272191 cttatgaggatacaaatttcgttcataagaacttatgaattaacatataagtttatttttttgcataa-gtatttttcata 10272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Original strand, 27769752 - 27769784
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||| ||||||||||||||||||||||||||||    
T  27769752 ttataaattaacataaaagcttatttatttgca 27769784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Original strand, 30383868 - 30383900
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgca 453  Q
    |||||||||||||||||| ||||||||||||||    
T  30383868 ttatgaattaacataaaaacttatttatttgca 30383900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 48611 - 48568
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttt 464  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||    
T  48611 ttatgaattaacataaaagcttatttatttgcataagctatttt 48568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 24843 - 24898
Alignment:
Q  414 tgagaatttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||||| |||| ||||||||||||| |||||||||||||| ||| || ||||||||    
T  24843 tgagaacttataaattaacataaaaacttatttatttgcataagctacttttcata 24898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Original strand, 1168 - 1209
Alignment:
Q  428 ttaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| ||||||||||||||||||||| ||| |||||||||||    
T  1168 ttaatataaaagcttatttatttgcataagttatttttcata 1209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 4167 - 4215
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||||||||||||| ||| ||||||| ||| |||||||||||    
T  4167 ttataaattaacataaaagctcattgatttgcataagctatttttcata 4215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 38436 - 38388
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaaggtatttttcata 469  Q
    |||| |||||| |||||||||||||||||| || ||| |||||||||||    
T  38436 ttataaattaaaataaaagcttatttatttacataagctatttttcata 38388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 457
Target Start/End: Original strand, 227810 - 227846
Alignment:
Q  421 ttatgaattaacataaaagcttatttatttgcacaag 457  Q
    ||||||||||||||||||||||| || ||||||||||    
T  227810 ttatgaattaacataaaagcttaattctttgcacaag 227846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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